GENSCAN 1.0	Date run:  4-Nov-116	Time: 15:08:06

Sequence gi568815575f:38704947_38905495 : 200549 bp : 39.85% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +   6663   6702   40                              -3.35
 1.01 Init +  14442  14588  147  2  0   75  101    87 0.512   8.84
 1.02 Intr +  21334  21447  114  0  0  118   15    92 0.738   4.62
 1.03 Intr +  25350  25493  144  2  0   83   65   102 0.913   6.96
 1.04 Term +  29790  30059  270  2  0   30   54   242 0.735   9.50
 1.05 PlyA +  30694  30699    6                               1.05

 2.08 PlyA -  33750  33745    6                               1.05
 2.07 Term -  42012  41423  590  1  2  -48   40   460 0.518  21.29
 2.06 Intr -  43470  43356  115  0  1   86   52    86 0.144   3.90
 2.05 Intr -  44851  44696  156  1  0   41   49   117 0.056   2.39
 2.04 Intr -  66032  65841  192  2  0   46   33   163 0.406   5.37
 2.03 Intr -  69222  68968  255  0  0   67   24   136 0.652   1.82
 2.02 Intr -  69837  69689  149  1  2   47   14   145 0.465   2.03
 2.01 Init -  77341  77272   70  1  1   53  -11   118 0.322  -0.34
 2.00 Prom -  79355  79316   40                              -4.25

 3.00 Prom +  86374  86413   40                              -5.85
 3.01 Sngl +  87626  87946  321  1  0   30   39   202 0.692   5.24
 3.02 PlyA +  88026  88031    6                               1.05

 4.00 Prom +  90017  90056   40                              -4.85
 4.01 Sngl + 100001 100552  552  1  0  108   54   783 0.936  72.76
 4.02 PlyA + 101474 101479    6                               1.05

 5.05 PlyA - 101696 101691    6                               1.05
 5.04 Term - 105952 105541  412  0  1   55   37   136 0.164  -1.07
 5.03 Intr - 109190 109118   73  0  1   92   77    68 0.201   3.65
 5.02 Intr - 115236 115107  130  0  1   62   81    25 0.186  -1.45
 5.01 Init - 122060 121701  360  2  0   71   42   184 0.534   9.22
 5.00 Prom - 122114 122075   40                              -4.25

 6.00 Prom + 129331 129370   40                              -3.75
 6.01 Init + 141825 141904   80  2  2   87   76    78 0.034   7.08
 6.02 Intr + 152796 152930  135  0  0  -51   99   155 0.026   1.46
 6.03 Intr + 158522 158640  119  2  2   29  110    88 0.288   4.29
 6.04 Intr + 159304 159432  129  2  0   71   73    61 0.509   2.65
 6.05 Intr + 165795 165898  104  1  2  110   94     5 0.305   2.27
 6.06 Term + 175180 175287  108  0  0   53   43    87 0.047  -1.77
 6.07 PlyA + 176283 176288    6                              -0.45

 7.03 PlyA - 177754 177749    6                               1.05
 7.02 Term - 178550 178299  252  2  0   61   44   161 0.239   3.65
 7.01 Intr - 190308 190135  174  0  0  105   57    55 0.137   3.31

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815575f:38704947_38905495|GENSCAN_predicted_peptide_1|224_aa
MQEQWQAFSLIGSGTERVTGSEVQHIPCWIWRVGSQWWVCNGGEQQWWTDPSVSSSSPPL
PTPCQGWDAWPKDPVQPLAVSQPQAMVVIVSLYYGTLPSDASSNLKRVNFPNFKLVGLGL
DSGEGNPEAQHASKRAQLASDYNSMKESKQELPSQAFPEFLTHKCEQHKIVILSLYVLGE
FVETDKQNKGEEKVSAEEMLINTNYKHEKKWPTMKEKSTEIERY

>gi568815575f:38704947_38905495|GENSCAN_predicted_CDS_1|675_bp
atgcaggaacaatggcaagcctttagcctgattgggagcggcactgagcgcgtcactgga
tcagaagtgcagcatataccctgctggatctggagggttggaagtcaatggtgggtctgc
aatggcggcgaacagcagtggtggacggacccatcggtgagcagcagctccccgccgctc
cccactccctgccagggctgggatgcatggcccaaggatccagtacagccgctggctgtt
tcccagccacaagccatggtggtaattgtgtctctgtactatgggacactcccctcagat
gcatcctccaacctgaaaagagttaattttccaaactttaaactggttggcttaggattg
gactcgggggaagggaacccagaagcccaacatgccagcaaaagggcccagctggcatct
gactacaacagcatgaaagaatccaagcaagaactgcctagtcaagccttccctgaattt
ctgacccacaaatgtgagcaacataaaatagttattttaagcctctatgttttgggagaa
tttgtagaaacagacaaacagaacaaaggggaagaaaaagtatctgctgaagagatgctc
attaacacaaattataaacatgaaaagaaatggcccacaatgaaggagaagtccacagaa
atagaaagatattga

>gi568815575f:38704947_38905495|GENSCAN_predicted_peptide_2|508_aa
MHVIAPEDLSVGQDVEAEDSDIHEGPDQLGGVSTVLVDASQVCPSQETSAPREVGEIRAR
SRSEAALVALGAVAVSSNRPGQAAFRSDTFATTSVSTSPPPPSTSNVVQKTSRSLTELVC
NGLLSIILASSLPAIFATKFFLFKLFLIIENGSIFPVKVRNTDEDLESTEFQATVKNEAN
DFIYGRDYSRNDFKQSSSSAVNEHYYKNIFVDLIRVVLPLVLPSILSPLLLAASPFLLCY
FMDQHLQMRPQALTEELAASSDTSELSGSPHIAEGIYGYLGLSLHGCKMAAMGLGIEWKH
NNAQLKKRDVCTQQEKALQQVQAAVQAALPLGPYDPVDPMVLEVSVADRVAVWSLWQAPI
GESQRRSLGFWSKALPSSANNYSPFERQFLACYWDLVETERLTMGHQVTMRPELPIMNWV
LSDPSSHKVGHAQQHSIIKWKWYISDRAQAGPESTSKLHDEVAQMPMVSTPAALPSVPQP
APVASCGVPYDQLIEEEKTRAWFTDGSA

>gi568815575f:38704947_38905495|GENSCAN_predicted_CDS_2|1527_bp
atgcatgttattgcccctgaagacctttcagtgggacaagatgtagaagcggaagacagt
gatattcatgaaggtccagatcagttgggtggtgtgagtacagttctggtggatgcttct
caggtatgtccttctcaggaaacttccgcaccaagagaagttggagaaatcagagcaagg
tcacgcagtgaggcagctttagtggccttaggagcagtggcagtcagttccaatagacct
ggacaagcagcatttagaagcgatacctttgccaccaccagtgtctccacctctcctcca
ccaccttccaccagtaatgtagttcagaaaacttctcgttccttgactgaacttgtttgc
aatggccttctaagcatcatccttgcttccagtctccctgctatatttgccaccaaattt
ttcctgtttaaattatttttaattatagaaaatggatctatatttccagtcaaagtaagg
aacacagatgaagatttggaaagcacagaattccaagcaacggttaaaaatgaagcaaat
gatttcatctacgggagagactatagcagaaacgattttaagcagtcatctagcagcgct
gttaatgaacactattacaagaacatttttgttgaccttattagggttgttctcccatta
gtgttaccctcgattctctctccactacttctggcggcttctccctttctcctgtgttat
ttcatggaccagcaccttcagatgcgcccccaagctctgactgaggaattggcagcttct
tctgacacaagtgagctcagcggctctccccacatcgcagagggtatttatggctaccta
ggcttgtcccttcatggttgcaaaatggctgccatgggtttaggcattgaatggaaacac
aacaatgcccaactgaagaaaagagatgtctgcactcaacaggagaaggctctgcaacag
gtccaggctgctgtgcaagctgctctgccacttgggccatatgacccagtagatccaatg
gtgcttgaggtgtcagtggcagatagggttgctgtttggagcctttggcaggctcccata
ggtgaatcacagcggaggtctctaggattttggagcaaggccctgccatcttctgcaaat
aactactctccttttgagagacagttcttggcctgttactgggatttggtggaaactgaa
cgtttgactatgggtcatcaagtcaccatgagacctgaactgcctatcatgaactgggtg
ctttctgacccatctagccacaaagtgggtcatgcacagcagcattccatcatcaaatgg
aagtggtatataagtgatcgggctcaagcaggtcctgaaagcacaagtaagttacatgac
gaagtggctcaaatgcccatggtctccactcctgccgccctgccttctgtcccccagcct
gcaccagtggcttcatgtggagttccctatgatcagttgatagaggaagagaagactagg
gcctggttcacagatggttctgcatga

>gi568815575f:38704947_38905495|GENSCAN_predicted_peptide_3|106_aa
MEIRLIVSNAGNVKYDENRKVDLQHEQWLVTSAGAISMEQWHWKPEWGGLKNAQKVDRDC
RQLWEKAGYEGEERDDEAGEETGDIYCWWWIFYNKNPFWSFECYGH

>gi568815575f:38704947_38905495|GENSCAN_predicted_CDS_3|321_bp
atggagataaggttaatagtgtcaaatgctggcaatgtcaagtatgatgagaatcgaaag
gtggatttgcaacatgaacaatggctagtaacatcagcaggagcaatttctatggagcaa
tggcactggaagccagaatggggtgggttaaagaatgcacagaaggtggacagagattgt
agacaactctgggagaaggcaggctatgaaggcgaagagagagatgatgaagctggcgag
gagaccggggatatttattgttggtggtggattttttataataaaaaccctttttggtcc
tttgaatgctacgggcactag

>gi568815575f:38704947_38905495|GENSCAN_predicted_peptide_4|183_aa
MMQICDTYNQKHSLFNAMNRFIGAVNNMDQTVMVPSLLRDVPLADPGLDNDVGVEVGGSG
GCLEERTPPVPDSGSANGSFFAPSRDMYSHYVLLKSIRNDIEWGVLHQPPPPAGSEEGSA
WKSKDILVDLGHLEGADAGEEDLEQQFHYHLRGLHTVLSKLTRKANILTNRYKQEIGFGN
WGH

>gi568815575f:38704947_38905495|GENSCAN_predicted_CDS_4|552_bp
atgatgcaaatctgcgacacctacaaccagaagcactcgctctttaacgccatgaatcgc
ttcattggcgccgtgaacaacatggaccagacggtgatggtgcccagcttgctgcgcgac
gtgcccctggctgaccccgggttagacaacgatgttggcgtggaggtaggcggcagtggc
ggctgcctggaggagcgcacgcccccagtccccgactcgggaagcgccaatggcagcttt
ttcgcgccctctcgggacatgtacagccactacgtgcttctcaagtccatccgcaacgac
atcgagtggggggtcctgcaccagccgcctccaccggctgggagcgaggagggcagtgcc
tggaagtccaaggacatcctggtggacctgggccacttggagggtgcggacgccggcgaa
gaagacctggaacagcagttccactaccacctgcgcgggctgcacactgtgctctcgaaa
ctcacgcgcaaagccaacatcctcactaacagatacaagcaggagatcggcttcggcaat
tggggccactga

>gi568815575f:38704947_38905495|GENSCAN_predicted_peptide_5|324_aa
MGKDFMTKTPKAMATKAKIDKWDLTKLKSFCTAKETIIRVNRQPTEWDKIFAIYPSDKGL
IPRIYKELKQIYKKKTNNPIKKWAKDMNRHFSKEDIYAAKKHMKKYSPSLAIREMQIKTT
PVFSSYYLTSVAQNPGYPPPISHSEDGSHGTRPCGHAVRGYGNGLCDYIGSIKDPYKAII
QDDLPIRRSILHHKRPCMHKYGQPSLHVQAPSTAPHQAPGLGVHTSAAHLPLENTPRTDA
YEIPGMGSEPFGQGTLGIQVPRVWSRSRDTVLDIPLALRIFCPMESGKALRQSELGSCIV
ESPGHEICMSQKIILVFRDKNSCW

>gi568815575f:38704947_38905495|GENSCAN_predicted_CDS_5|975_bp
atgggcaaagacttcatgactaaaacaccaaaagcaatggcaacaaaagccaaaattgac
aaatgggatctaactaaactaaagagcttctgcacagcaaaagaaactatcatcagagta
aacaggcaacctacagaatgggataaaatctttgcaatctatccatctgacaaagggcta
atacccagaatctacaaagaactcaaacaaatttacaagaaaaaaacaaacaaccccatc
aaaaagtgggcgaaggacatgaacagacacttctcaaaagaagacatttatgcagccaaa
aaacacatgaaaaaatactcaccatcactggccatcagagaaatgcaaatcaaaaccaca
cctgtcttttcttcctactacctcaccagtgtggctcaaaacccaggctacccaccaccc
atttcccacagtgaagatgggtcacatggaaccagaccctgtggtcatgctgtcagggga
tatgggaatggactttgtgattacattgggtccatcaaggacccatacaaggccataatc
caggatgatctccctatcagaagatccattctgcaccacaaaaggccttgtatgcacaaa
tatggacagcccagtctgcatgtccaagctccatccacagctccccaccaagccccaggc
ctaggggtgcacacgtcagcagctcatctaccactggagaatacacccaggacagatgcc
tatgaaatccctggaatgggatcagagccatttggacagggaactctgggtatccaagtg
cccagagtgtggtctagaagtcgggacacagttctggacattcctttggctctgaggatt
ttctgccccatggagagtggcaaggccttacgacagtcagagttggggtcttgtatagtg
gagagtcctgggcatgagatttgcatgagtcaaaagataatactagttttcagagacaaa
aacagttgttggtaa

>gi568815575f:38704947_38905495|GENSCAN_predicted_peptide_6|224_aa
MTREYRTRTKHGVTFRSRKEDFVVSRIVWRAAGTSPLEVFVLEELRSILRGHNPSEKDEP
GMKQPGLRSVAWKWKGGFKQHRDVKVGERGEGIEVVEVVGKGVGVMMGSKPEFLKYQTSV
QMHFSPCSNCPCSNYISKDSTAKLTPHYQLFLGHVTCIFSETAAILVSQPFLGRDVPVSG
KRQLLCMSEEQECPHVLTSPRSLYLQMSDELVNVPAPPTAVASV

>gi568815575f:38704947_38905495|GENSCAN_predicted_CDS_6|675_bp
atgactagagaatatcggacacggacaaaacatggtgtcacctttagatcaagaaaggag
gactttgtggtgagtaggattgtctggagagctgcagggacaagcccattggaagtcttt
gtgcttgaggaactaaggagtatcctaagagggcacaacccctcagagaaggatgaacca
gggatgaagcagccaggcctaaggagcgtggcctggaagtggaaaggtggatttaaacag
catagggatgtgaaggtaggagaaagaggtgagggaattgaggtggttgaagtggtagga
aagggagtgggtgttatgatgggatcaaagccagaatttctaaaataccagacatctgtc
cagatgcatttcagcccttgtagcaactgcccttgtagcaactacatttctaaagatagc
acagccaagttaactccacattaccagttatttttagggcacgtgacttgcattttctct
gagacagctgccattctagtctcccagccattcttaggaagagacgtgcctgtctctggg
aagaggcaacttctctgcatgtcagaggagcaggaatgtccacatgtgctcacgagcccg
agaagtctgtacctgcagatgagtgatgagctcgtgaatgtacctgctcctccaacagca
gttgcctccgtataa

>gi568815575f:38704947_38905495|GENSCAN_predicted_peptide_7|141_aa
LSNLHTGWVIMHIHLNIANGSIFKAVVISSGELSLRSPTPSPPQSHPTQGGCHISSVEEA
LSRFVGSMTVPWFGKLAGTPVGECHRGPGWGWECDSVPNHSTGDEESLDSFSGSFNNQPG
MESQTARISFTKNEQFHWTTA

>gi568815575f:38704947_38905495|GENSCAN_predicted_CDS_7|426_bp
ctttctaatctgcacactggttgggtgatcatgcacattcatcttaacatagccaatgga
agtatttttaaggctgttgtcatctcttctggagagctttccttgagatctcccacccca
agcccacctcaatcccacccaacccaagggggctgccacatctccagtgttgaggaagcc
cttagcaggtttgtgggaagtatgactgtaccctggtttggaaagcttgcaggaacgcca
gttggggagtgccatagagggccagggtggggttgggagtgtgactcagtgcccaatcat
agtacaggagatgaggagtcactggactcattctctggaagcttcaacaatcaaccaggg
atggagtctcaaactgccagaatctcttttaccaaaaatgaacaatttcactggactaca
gcttga