Result of FASTA (omim) for
pF1KB8691
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8691, 693 aa
1>>>pF1KB8691 693 - 693 aa - 693 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 11.0379+/-0.000387; mu= -4.6202+/- 0.024
mean_var=356.4364+/-73.511, 0's: 0 Z-trim(123.7): 25 B-trim: 530 in 2/58
Lambda= 0.067933
statistics sampled from 43876 (43901) to 43876 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.782), E-opt: 0.2 (0.515), width: 16
Scan time: 13.150
The best scores are: opt bits E(85289)
NP_071400 (OMIM: 300564) testis-specific Y-encoded ( 693) 4744 479.0 2.6e-134
XP_006724655 (OMIM: 300564) PREDICTED: testis-spec ( 694) 4371 442.4 2.7e-123
XP_016885216 (OMIM: 300564) PREDICTED: testis-spec ( 737) 2749 283.5 2e-75
XP_016885215 (OMIM: 300564) PREDICTED: testis-spec ( 738) 2376 246.9 2e-64
NP_003300 (OMIM: 604714,608800) testis-specific Y- ( 437) 745 86.9 1.8e-16
NP_277047 (OMIM: 614721) testis-specific Y-encoded ( 417) 672 79.7 2.5e-14
NP_003299 (OMIM: 480100) testis-specific Y-encoded ( 308) 568 69.4 2.3e-11
NP_001307893 (OMIM: 480100) testis-specific Y-enco ( 221) 540 66.6 1.2e-10
NP_001184171 (OMIM: 480100) testis-specific Y-enco ( 294) 501 62.8 2.1e-09
NP_003002 (OMIM: 600960) protein SET isoform 2 [Ho ( 277) 405 53.4 1.4e-06
XP_016870505 (OMIM: 600960) PREDICTED: protein SET ( 296) 405 53.4 1.4e-06
NP_001234930 (OMIM: 600960) protein SET isoform 4 ( 266) 403 53.2 1.5e-06
NP_001234929 (OMIM: 600960) protein SET isoform 3 ( 268) 403 53.2 1.5e-06
NP_001116293 (OMIM: 600960) protein SET isoform 1 ( 290) 403 53.2 1.6e-06
XP_016870504 (OMIM: 600960) PREDICTED: protein SET ( 309) 403 53.2 1.7e-06
XP_016870502 (OMIM: 600960) PREDICTED: protein SET ( 309) 403 53.2 1.7e-06
XP_016870503 (OMIM: 600960) PREDICTED: protein SET ( 309) 403 53.2 1.7e-06
XP_016885553 (OMIM: 480100) PREDICTED: testis-spec ( 288) 366 49.6 2e-05
>>NP_071400 (OMIM: 300564) testis-specific Y-encoded-lik (693 aa)
initn: 4744 init1: 4744 opt: 4744 Z-score: 2532.2 bits: 479.0 E(85289): 2.6e-134
Smith-Waterman score: 4744; 100.0% identity (100.0% similar) in 693 aa overlap (1-693:1-693)
10 20 30 40 50 60
pF1KB8 MDRPDEGPPAKTRRLSSSESPQRDPPPPPPPPPLLRLPLPPPQQRPRLQEETEAAQVLAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 MDRPDEGPPAKTRRLSSSESPQRDPPPPPPPPPLLRLPLPPPQQRPRLQEETEAAQVLAD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 MRGVGLGPALPPPPPYVILEEGGIRAYFTLGAECPGWDSTIESGYGEAPPPTESLEALPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 MRGVGLGPALPPPPPYVILEEGGIRAYFTLGAECPGWDSTIESGYGEAPPPTESLEALPT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 PEASGGSLEIDFQVVQSSSFGGEGALETCSAVGWAPQRLVDPKSKEEAIIIVEDEDEDER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 PEASGGSLEIDFQVVQSSSFGGEGALETCSAVGWAPQRLVDPKSKEEAIIIVEDEDEDER
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 ESMRSSRRRRRRRRRKQRKVKRESRERNAERMESILQALEDIQLDLEAVNIKAGKAFLRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 ESMRSSRRRRRRRRRKQRKVKRESRERNAERMESILQALEDIQLDLEAVNIKAGKAFLRL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 KRKFIQMRRPFLERRDLIIQHIPGFWVKAFLNHPRISILINRRDEDIFRYLTNLQVQDLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 KRKFIQMRRPFLERRDLIIQHIPGFWVKAFLNHPRISILINRRDEDIFRYLTNLQVQDLR
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 HISMGYKMKLYFQTNPYFTNMVIVKEFQRNRSGRLVSHSTPIRWHRGQEPQARRHGNQDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 HISMGYKMKLYFQTNPYFTNMVIVKEFQRNRSGRLVSHSTPIRWHRGQEPQARRHGNQDA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 SHSFFSWFSNHSLPEADRIAEIIKNDLWVNPLRYYLRERGSRIKRKKQEMKKRKTRGRCE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 SHSFFSWFSNHSLPEADRIAEIIKNDLWVNPLRYYLRERGSRIKRKKQEMKKRKTRGRCE
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB8 VVIMEDAPDYYAVEDIFSEISDIDETIHDIKISDFMETTDYFETTDNEITDINENICDSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 VVIMEDAPDYYAVEDIFSEISDIDETIHDIKISDFMETTDYFETTDNEITDINENICDSE
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB8 NPDHNEVPNNETTDNNESADDHETTDNNESADDNNENPEDNNKNTDDNEENPNNNENTYG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 NPDHNEVPNNETTDNNESADDHETTDNNESADDNNENPEDNNKNTDDNEENPNNNENTYG
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB8 NNFFKGGFWGSHGNNQDSSDSDNEADEASDDEDNDGNEGDNEGSDDDGNEGDNEGSDDDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 NNFFKGGFWGSHGNNQDSSDSDNEADEASDDEDNDGNEGDNEGSDDDGNEGDNEGSDDDD
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB8 RDIEYYEKVIEDFDKDQADYEDVIEIISDESVEEEGIEEGIQQDEDIYEEGNYEEEGSED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 RDIEYYEKVIEDFDKDQADYEDVIEIISDESVEEEGIEEGIQQDEDIYEEGNYEEEGSED
610 620 630 640 650 660
670 680 690
pF1KB8 VWEEGEDSDDSDLEDVLQVPNGWANPGKRGKTG
:::::::::::::::::::::::::::::::::
NP_071 VWEEGEDSDDSDLEDVLQVPNGWANPGKRGKTG
670 680 690
>>XP_006724655 (OMIM: 300564) PREDICTED: testis-specific (694 aa)
initn: 4371 init1: 4371 opt: 4371 Z-score: 2334.6 bits: 442.4 E(85289): 2.7e-123
Smith-Waterman score: 4371; 100.0% identity (100.0% similar) in 640 aa overlap (1-640:1-640)
10 20 30 40 50 60
pF1KB8 MDRPDEGPPAKTRRLSSSESPQRDPPPPPPPPPLLRLPLPPPQQRPRLQEETEAAQVLAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MDRPDEGPPAKTRRLSSSESPQRDPPPPPPPPPLLRLPLPPPQQRPRLQEETEAAQVLAD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 MRGVGLGPALPPPPPYVILEEGGIRAYFTLGAECPGWDSTIESGYGEAPPPTESLEALPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MRGVGLGPALPPPPPYVILEEGGIRAYFTLGAECPGWDSTIESGYGEAPPPTESLEALPT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 PEASGGSLEIDFQVVQSSSFGGEGALETCSAVGWAPQRLVDPKSKEEAIIIVEDEDEDER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PEASGGSLEIDFQVVQSSSFGGEGALETCSAVGWAPQRLVDPKSKEEAIIIVEDEDEDER
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 ESMRSSRRRRRRRRRKQRKVKRESRERNAERMESILQALEDIQLDLEAVNIKAGKAFLRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 ESMRSSRRRRRRRRRKQRKVKRESRERNAERMESILQALEDIQLDLEAVNIKAGKAFLRL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 KRKFIQMRRPFLERRDLIIQHIPGFWVKAFLNHPRISILINRRDEDIFRYLTNLQVQDLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KRKFIQMRRPFLERRDLIIQHIPGFWVKAFLNHPRISILINRRDEDIFRYLTNLQVQDLR
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 HISMGYKMKLYFQTNPYFTNMVIVKEFQRNRSGRLVSHSTPIRWHRGQEPQARRHGNQDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 HISMGYKMKLYFQTNPYFTNMVIVKEFQRNRSGRLVSHSTPIRWHRGQEPQARRHGNQDA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 SHSFFSWFSNHSLPEADRIAEIIKNDLWVNPLRYYLRERGSRIKRKKQEMKKRKTRGRCE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SHSFFSWFSNHSLPEADRIAEIIKNDLWVNPLRYYLRERGSRIKRKKQEMKKRKTRGRCE
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB8 VVIMEDAPDYYAVEDIFSEISDIDETIHDIKISDFMETTDYFETTDNEITDINENICDSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 VVIMEDAPDYYAVEDIFSEISDIDETIHDIKISDFMETTDYFETTDNEITDINENICDSE
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB8 NPDHNEVPNNETTDNNESADDHETTDNNESADDNNENPEDNNKNTDDNEENPNNNENTYG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 NPDHNEVPNNETTDNNESADDHETTDNNESADDNNENPEDNNKNTDDNEENPNNNENTYG
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB8 NNFFKGGFWGSHGNNQDSSDSDNEADEASDDEDNDGNEGDNEGSDDDGNEGDNEGSDDDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 NNFFKGGFWGSHGNNQDSSDSDNEADEASDDEDNDGNEGDNEGSDDDGNEGDNEGSDDDD
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB8 RDIEYYEKVIEDFDKDQADYEDVIEIISDESVEEEGIEEGIQQDEDIYEEGNYEEEGSED
::::::::::::::::::::::::::::::::::::::::
XP_006 RDIEYYEKVIEDFDKDQADYEDVIEIISDESVEEEGIEEGELIPPHPCLPSFLFSEQAWP
610 620 630 640 650 660
670 680 690
pF1KB8 VWEEGEDSDDSDLEDVLQVPNGWANPGKRGKTG
XP_006 RTGYQGMNTICFYGGKKKHSEQLFKQRKSSEHLT
670 680 690
>>XP_016885216 (OMIM: 300564) PREDICTED: testis-specific (737 aa)
initn: 2745 init1: 2745 opt: 2749 Z-score: 1475.1 bits: 283.5 E(85289): 2e-75
Smith-Waterman score: 4556; 93.9% identity (93.9% similar) in 725 aa overlap (13-693:13-737)
10 20 30 40 50 60
pF1KB8 MDRPDEGPPAKTRRLSSSESPQRDPPPPPPPPPLLRLPLPPPQQRPRLQEETEAAQVLAD
::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MDRPDEGPPAKTRRLSSSESPQRDPPPPPPPPPLLRLPLPPPQQRPRLQEETEAAQVLAD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 MRGVGLGPALPPPPPYVILEEGGIRAYFTLGAECPGWDSTIESGYGEAPPPTESLEALPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MRGVGLGPALPPPPPYVILEEGGIRAYFTLGAECPGWDSTIESGYGEAPPPTESLEALPT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 PEASGGSLEIDFQVVQSSSFGGEGALETCSAVGWAPQRLVDPKSKEEAIIIVEDEDEDER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PEASGGSLEIDFQVVQSSSFGGEGALETCSAVGWAPQRLVDPKSKEEAIIIVEDEDEDER
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 ESMRSSRRRRRRRRRKQRKVKRESRERNAERMESILQALEDIQLDLEAVNIKAGKAFLRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ESMRSSRRRRRRRRRKQRKVKRESRERNAERMESILQALEDIQLDLEAVNIKAGKAFLRL
190 200 210 220 230 240
250 260 270 280 290
pF1KB8 KRKFIQMRRPFLERRDLIIQHIPGFWVKAFLNHPRISILINRRDEDIFRYLTNLQV----
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KRKFIQMRRPFLERRDLIIQHIPGFWVKAFLNHPRISILINRRDEDIFRYLTNLQVRPER
250 260 270 280 290 300
300 310
pF1KB8 ----------------------------------------QDLRHISMGYKMKLYFQTNP
::::::::::::::::::::
XP_016 HFLVGSGTNLVLGGDGRWVGRAVVCWGGDRFHHHPHLEQVQDLRHISMGYKMKLYFQTNP
310 320 330 340 350 360
320 330 340 350 360 370
pF1KB8 YFTNMVIVKEFQRNRSGRLVSHSTPIRWHRGQEPQARRHGNQDASHSFFSWFSNHSLPEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YFTNMVIVKEFQRNRSGRLVSHSTPIRWHRGQEPQARRHGNQDASHSFFSWFSNHSLPEA
370 380 390 400 410 420
380 390 400 410 420 430
pF1KB8 DRIAEIIKNDLWVNPLRYYLRERGSRIKRKKQEMKKRKTRGRCEVVIMEDAPDYYAVEDI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DRIAEIIKNDLWVNPLRYYLRERGSRIKRKKQEMKKRKTRGRCEVVIMEDAPDYYAVEDI
430 440 450 460 470 480
440 450 460 470 480 490
pF1KB8 FSEISDIDETIHDIKISDFMETTDYFETTDNEITDINENICDSENPDHNEVPNNETTDNN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FSEISDIDETIHDIKISDFMETTDYFETTDNEITDINENICDSENPDHNEVPNNETTDNN
490 500 510 520 530 540
500 510 520 530 540 550
pF1KB8 ESADDHETTDNNESADDNNENPEDNNKNTDDNEENPNNNENTYGNNFFKGGFWGSHGNNQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ESADDHETTDNNESADDNNENPEDNNKNTDDNEENPNNNENTYGNNFFKGGFWGSHGNNQ
550 560 570 580 590 600
560 570 580 590 600 610
pF1KB8 DSSDSDNEADEASDDEDNDGNEGDNEGSDDDGNEGDNEGSDDDDRDIEYYEKVIEDFDKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DSSDSDNEADEASDDEDNDGNEGDNEGSDDDGNEGDNEGSDDDDRDIEYYEKVIEDFDKD
610 620 630 640 650 660
620 630 640 650 660 670
pF1KB8 QADYEDVIEIISDESVEEEGIEEGIQQDEDIYEEGNYEEEGSEDVWEEGEDSDDSDLEDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QADYEDVIEIISDESVEEEGIEEGIQQDEDIYEEGNYEEEGSEDVWEEGEDSDDSDLEDV
670 680 690 700 710 720
680 690
pF1KB8 LQVPNGWANPGKRGKTG
:::::::::::::::::
XP_016 LQVPNGWANPGKRGKTG
730
>>XP_016885215 (OMIM: 300564) PREDICTED: testis-specific (738 aa)
initn: 2549 init1: 2372 opt: 2376 Z-score: 1277.5 bits: 246.9 E(85289): 2e-64
Smith-Waterman score: 4183; 93.5% identity (93.5% similar) in 672 aa overlap (13-640:13-684)
10 20 30 40 50 60
pF1KB8 MDRPDEGPPAKTRRLSSSESPQRDPPPPPPPPPLLRLPLPPPQQRPRLQEETEAAQVLAD
::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MDRPDEGPPAKTRRLSSSESPQRDPPPPPPPPPLLRLPLPPPQQRPRLQEETEAAQVLAD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 MRGVGLGPALPPPPPYVILEEGGIRAYFTLGAECPGWDSTIESGYGEAPPPTESLEALPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MRGVGLGPALPPPPPYVILEEGGIRAYFTLGAECPGWDSTIESGYGEAPPPTESLEALPT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 PEASGGSLEIDFQVVQSSSFGGEGALETCSAVGWAPQRLVDPKSKEEAIIIVEDEDEDER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PEASGGSLEIDFQVVQSSSFGGEGALETCSAVGWAPQRLVDPKSKEEAIIIVEDEDEDER
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 ESMRSSRRRRRRRRRKQRKVKRESRERNAERMESILQALEDIQLDLEAVNIKAGKAFLRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ESMRSSRRRRRRRRRKQRKVKRESRERNAERMESILQALEDIQLDLEAVNIKAGKAFLRL
190 200 210 220 230 240
250 260 270 280 290
pF1KB8 KRKFIQMRRPFLERRDLIIQHIPGFWVKAFLNHPRISILINRRDEDIFRYLTNLQV----
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KRKFIQMRRPFLERRDLIIQHIPGFWVKAFLNHPRISILINRRDEDIFRYLTNLQVRPER
250 260 270 280 290 300
300 310
pF1KB8 ----------------------------------------QDLRHISMGYKMKLYFQTNP
::::::::::::::::::::
XP_016 HFLVGSGTNLVLGGDGRWVGRAVVCWGGDRFHHHPHLEQVQDLRHISMGYKMKLYFQTNP
310 320 330 340 350 360
320 330 340 350 360 370
pF1KB8 YFTNMVIVKEFQRNRSGRLVSHSTPIRWHRGQEPQARRHGNQDASHSFFSWFSNHSLPEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YFTNMVIVKEFQRNRSGRLVSHSTPIRWHRGQEPQARRHGNQDASHSFFSWFSNHSLPEA
370 380 390 400 410 420
380 390 400 410 420 430
pF1KB8 DRIAEIIKNDLWVNPLRYYLRERGSRIKRKKQEMKKRKTRGRCEVVIMEDAPDYYAVEDI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DRIAEIIKNDLWVNPLRYYLRERGSRIKRKKQEMKKRKTRGRCEVVIMEDAPDYYAVEDI
430 440 450 460 470 480
440 450 460 470 480 490
pF1KB8 FSEISDIDETIHDIKISDFMETTDYFETTDNEITDINENICDSENPDHNEVPNNETTDNN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FSEISDIDETIHDIKISDFMETTDYFETTDNEITDINENICDSENPDHNEVPNNETTDNN
490 500 510 520 530 540
500 510 520 530 540 550
pF1KB8 ESADDHETTDNNESADDNNENPEDNNKNTDDNEENPNNNENTYGNNFFKGGFWGSHGNNQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ESADDHETTDNNESADDNNENPEDNNKNTDDNEENPNNNENTYGNNFFKGGFWGSHGNNQ
550 560 570 580 590 600
560 570 580 590 600 610
pF1KB8 DSSDSDNEADEASDDEDNDGNEGDNEGSDDDGNEGDNEGSDDDDRDIEYYEKVIEDFDKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DSSDSDNEADEASDDEDNDGNEGDNEGSDDDGNEGDNEGSDDDDRDIEYYEKVIEDFDKD
610 620 630 640 650 660
620 630 640 650 660 670
pF1KB8 QADYEDVIEIISDESVEEEGIEEGIQQDEDIYEEGNYEEEGSEDVWEEGEDSDDSDLEDV
::::::::::::::::::::::::
XP_016 QADYEDVIEIISDESVEEEGIEEGELIPPHPCLPSFLFSEQAWPRTGYQGMNTICFYGGK
670 680 690 700 710 720
>>NP_003300 (OMIM: 604714,608800) testis-specific Y-enco (437 aa)
initn: 793 init1: 733 opt: 745 Z-score: 416.7 bits: 86.9 E(85289): 1.8e-16
Smith-Waterman score: 847; 40.0% identity (65.5% similar) in 400 aa overlap (43-407:31-420)
20 30 40 50 60 70
pF1KB8 RRLSSSESPQRDPPPPPPPPPLLRLPLPPPQQRPRLQEETEAAQVLADM-RGVGLGPALP
.: ::....::.::.:. .: . :::
NP_003 MSGLDGVKRTTPLQTHSIIISDQVPSDQDAHQYLRLRDQSEATQVMAEPGEGGSETVALP
10 20 30 40 50 60
80 90 100 110 120
pF1KB8 PPPPYVILEEGGIRAYFTLGAECP-----GWDS--TIESGYGEAPPPTESLEALPTPEAS
:::: ::::. . . : : . .:..: :. ::.:.: : . :.
NP_003 PPPPS---EEGGVPQDAAGRGGTPQIRVVGGRGHVAIKAGQEEGQPPAEGLAAASVVMAA
70 80 90 100 110
130 140 150 160 170
pF1KB8 GGSLEIDFQVVQSSSFGGEGALETCSAVGWAPQRLVDPKSKEEAI----------IIVED
::. : ::: ::: :.: : . . ... : . ..:
NP_003 DRSLKKGVQ-------GGEKALEICGAQRSASELTAGAEAEAEEVKTGKCATVSAAVAER
120 130 140 150 160 170
180 190 200 210
pF1KB8 EDED-------ERESMRSSRRRRRR-------RRRKQRKVKRESRERNAER--MESI-LQ
:. . :.: :. . . ... . .. ....:.::... :.. ..
NP_003 ESAEVVKEGLAEKEVMEEQMEVEEQPPEGEEIEVAEEDRLEEEAREEEGPWPLHEALRMD
180 190 200 210 220 230
220 230 240 250 260 270
pF1KB8 ALEDIQLDLEAVNIKAGKAFLRLKRKFIQMRRPFLERRDLIIQHIPGFWVKAFLNHPRIS
:: :::.:..:: .: .:: .:..:: .::: .::::. :::.:::::. :: :::..:
NP_003 PLEAIQLELDTVNAQADRAFQQLEHKFGRMRRHYLERRNYIIQNIPGFWMTAFRNHPQLS
240 250 260 270 280 290
280 290 300 310 320 330
pF1KB8 ILINRRDEDIFRYLTNLQVQDLRHISMGYKMKLYFQTNPYFTNMVIVKEFQRNRSGRLVS
.: .: ...::.:::.:..::: : :.:..:. :::: : .::::.. :::.::
NP_003 AMIRGQDAEMLRYITNLEVKELRHPRTGCKFKFFFRRNPYFRNKLIVKEYEVRSSGRVVS
300 310 320 330 340 350
340 350 360 370 380 390
pF1KB8 HSTPIRWHRGQEPQARRHGNQDASHSFFSWFSNHSLPEADRIAEIIKNDLWVNPLRYYLR
:::: :.::.:::. . ::: :::.:::.:::::.:.::::::.::: :::.:::
NP_003 LSTPIIWRRGHEPQSFIRRNQDLICSFFTWFSDHSLPESDKIAEIIKEDLWPNPLQYYLL
360 370 380 390 400 410
400 410 420 430 440 450
pF1KB8 ERGSRIKRKKQEMKKRKTRGRCEVVIMEDAPDYYAVEDIFSEISDIDETIHDIKISDFME
..: : :..
NP_003 REGVRRARRRPLREPVEIPRPFGFQSG
420 430
>>NP_277047 (OMIM: 614721) testis-specific Y-encoded-lik (417 aa)
initn: 735 init1: 659 opt: 672 Z-score: 378.3 bits: 79.7 E(85289): 2.5e-14
Smith-Waterman score: 733; 34.7% identity (63.2% similar) in 421 aa overlap (10-418:13-403)
10 20 30 40 50
pF1KB8 MDRPDEGPPAKTRRLSSSESPQRDPPPPPPPPPLLRLPLPPPQQRPRLQEETEAAQV
::.: . ... : : : : : :.: : :.:.::::
NP_277 MSGRSRGRKSSRAKNRGKGRAKARVR-PAPDDAPRD------PDPSQYQSLGEDTQAAQV
10 20 30 40 50
60 70 80 90 100
pF1KB8 LADMRGVGLGPALPPPPPYVIL---EEGGIRAYFTLG----AECPG--WDSTIESGYGEA
: :.: : .: .: ::.. : . : :. : ... . : :.:
NP_277 QA---GAGWG-GLEAAASAQLLRLGEEAACRLPLDCGLALRARAAGDHGQAAARPGPGKA
60 70 80 90 100
110 120 130 140 150 160
pF1KB8 PPPTESLEALPTPEASGGSL---EIDFQVVQSSSFGGEGALETCSAVGWAPQRLVDPKSK
.: : : . ...:.. . .: . . .:. : ::::..: .:: .. ..:
NP_277 ASLSERLAADTVFVGTAGTVGRPKNAPRVGNRRGPAGKKAPETCSTAGRGPQVIAGGRQK
110 120 130 140 150 160
170 180 190 200 210 220
pF1KB8 EEAIIIVEDEDEDERESMRSSRRRRRRRRRKQRKVKRESRERNAERMESILQALEDIQLD
. : : :. ........: . . :. ...::..::
NP_277 KGAA--------GENTSVSAGEEKKEERDAGS----------GPPATEGSMDTLENVQLK
170 180 190 200 210
230 240 250 260 270 280
pF1KB8 LEAVNIKAGKAFLRLKRKFIQMRRPFLERRDLIIQHIPGFWVKAFLNHPRISILINRRDE
:: .: .: .:.:::.::: :.: ::::. .::.::::: .:: :::... ..: ...
NP_277 LENMNAQADRAYLRLSRKFGQLRLQHLERRNHLIQNIPGFWGQAFQNHPQLASFLNSQEK
220 230 240 250 260 270
290 300 310 320 330 340
pF1KB8 DIFRYLTNLQVQDLRHISMGYKMKLYFQTNPYFTNMVIVKEFQRNRSGRLVSHSTPIRWH
... ::..:.:..: .:::.:.::. :::: : :..::. . ::..::.::::.:
NP_277 EVLSYLNSLEVEELGLARLGYKIKFYFDRNPYFQNKVLIKEYGCGPSGQVVSRSTPIQWL
280 290 300 310 320 330
350 360 370 380 390 400
pF1KB8 RGQEPQARRHGNQDASHSFFSWFSNHSLPEADRIAEIIKNDLWVNPLRYYLRERGSRIKR
:.. :. .:: . ..:::.:::::: :.:.:.:::...:: :::..:: .:.:...
NP_277 PGHDLQSLSQGNPENNRSFFGWFSNHSSIESDKIVEIINEELWPNPLQFYLLSEGARVEK
340 350 360 370 380 390
410 420 430 440 450 460
pF1KB8 KKQEMKKRKTRGRCEVVIMEDAPDYYAVEDIFSEISDIDETIHDIKISDFMETTDYFETT
: : . :. :.
NP_277 GK-EKEGRQGPGKQPMETTQPGVSQSN
400 410
>>NP_003299 (OMIM: 480100) testis-specific Y-encoded pro (308 aa)
initn: 610 init1: 560 opt: 568 Z-score: 325.0 bits: 69.4 E(85289): 2.3e-11
Smith-Waterman score: 568; 38.9% identity (69.2% similar) in 234 aa overlap (166-399:61-292)
140 150 160 170 180 190
pF1KB8 QSSSFGGEGALETCSAVGWAPQRLVDPKSKEEAIIIVEDEDEDERESMRSSRRRRRRRRR
:::.....: : : . . .::..
NP_003 CASAKEGTAFRMEAVQEGAAGVESEQAALGEEAVLLLDDI-MAEVEVVAEEEGLVERREE
40 50 60 70 80
200 210 220 230 240 250
pF1KB8 KQRKVKRESRERNAERMESILQALEDIQLDLEAVNIKAGKAFLRLKRKFIQMRRPFLERR
:: ... . :: . : .:..:: :: .: ::: : ..:. . :.: :.::
NP_003 AQR-AQQAVPGPGPMTPESAPEELLAVQVELEPVNAQARKAFSRQREKMERRRKPHLDRR
90 100 110 120 130 140
260 270 280 290 300 310
pF1KB8 DLIIQHIPGFWVKAFLNHPRISILINRRDEDIFRYLTNLQVQDLRHISMGYKMKLYFQTN
.:: .::::.... :::..: ::. .:::.. :...:.: . .: :. :.:..:
NP_003 GAVIQSVPGFWANVIANHPQMSALITDEDEDMLSYMVSLEVGEEKHPVHLCKIMLFFRSN
150 160 170 180 190 200
320 330 340 350 360 370
pF1KB8 PYFTNMVIVKEFQRNRSGRLVSHSTPIRWHRGQEPQARRHGNQDASHSFFSWFSNHSLPE
::: : ::.::. : . .::::::.:. : .: :. ....: .::.:::.:..
NP_003 PYFQNKVITKEYLVNITEYRASHSTPIEWYPDYEVEAYRRRHHNSSLNFFNWFSDHNFAG
210 220 230 240 250 260
380 390 400 410 420 430
pF1KB8 ADRIAEIIKNDLWVNPLRYYLRERGSRIKRKKQEMKKRKTRGRCEVVIMEDAPDYYAVED
...::::. .::: :::.:: : .
NP_003 SNKIAEILCKDLWRNPLQYYKRMKPPEEGTETSGDSQLLS
270 280 290 300
>>NP_001307893 (OMIM: 480100) testis-specific Y-encoded (221 aa)
initn: 564 init1: 537 opt: 540 Z-score: 312.1 bits: 66.6 E(85289): 1.2e-10
Smith-Waterman score: 540; 43.8% identity (75.0% similar) in 176 aa overlap (224-399:30-205)
200 210 220 230 240 250
pF1KB8 RRKQRKVKRESRERNAERMESILQALEDIQLDLEAVNIKAGKAFLRLKRKFIQMRRPFLE
..:: :: .: ::: : ..:. . :.: :.
NP_001 MRPEGSLTYRVPERLRQGFCGVGRAAQALVELEPVNAQARKAFSRQREKMERRRKPHLD
10 20 30 40 50
260 270 280 290 300 310
pF1KB8 RRDLIIQHIPGFWVKAFLNHPRISILINRRDEDIFRYLTNLQVQDLRHISMGYKMKLYFQ
:: .:: .::::.... :::..: ::. .:::.. :...:.: . .: :. :.:.
NP_001 RRGAVIQSVPGFWANVIANHPQMSALITDEDEDMLSYMVSLEVGEEKHPVHLCKIMLFFR
60 70 80 90 100 110
320 330 340 350 360 370
pF1KB8 TNPYFTNMVIVKEFQRNRSGRLVSHSTPIRWHRGQEPQARRHGNQDASHSFFSWFSNHSL
.:::: : ::.::. : . .::::::.:. : .: :. ....: .::.:::.:..
NP_001 SNPYFQNKVITKEYLVNITEYRASHSTPIEWYPDYEVEAYRRRHHNSSLNFFNWFSDHNF
120 130 140 150 160 170
380 390 400 410 420 430
pF1KB8 PEADRIAEIIKNDLWVNPLRYYLRERGSRIKRKKQEMKKRKTRGRCEVVIMEDAPDYYAV
...::::. .::: :::.:: : .
NP_001 AGSNKIAEILCKDLWRNPLQYYKRMKPPEEGTETSGDSQLLS
180 190 200 210 220
>>NP_001184171 (OMIM: 480100) testis-specific Y-encoded (294 aa)
initn: 510 init1: 487 opt: 501 Z-score: 289.8 bits: 62.8 E(85289): 2.1e-09
Smith-Waterman score: 501; 36.4% identity (66.1% similar) in 236 aa overlap (166-401:61-286)
140 150 160 170 180 190
pF1KB8 QSSSFGGEGALETCSAVGWAPQRLVDPKSKEEAIIIVEDEDEDERESMRSSRRRRRRRRR
:::.....: : : . . .::..
NP_001 CASAKEGTAFRMEAVQEGAAGVESEQAALGEEAVLLLDDI-MAEVEVVAEEEGLVERREE
40 50 60 70 80
200 210 220 230 240 250
pF1KB8 KQRKVKRESRERNAERMESILQALEDIQLDLEAVNIKAGKAFLRLKRKFIQMRRPFLERR
:: ... . :: . : .:..:: :: .: ::: : ..:. . :.: :.::
NP_001 AQR-AQQAVPGPGPMTPESAPEELLAVQVELEPVNAQARKAFSRQREKMERRRKPHLDRR
90 100 110 120 130 140
260 270 280 290 300 310
pF1KB8 DLIIQHIPGFWVKAFLNHPRISILINRRDEDIFRYLTNLQVQDLRHISMGYKMKLYFQTN
.:: .::::.... :::..: ::. .:::.. :...:.: . .: :. :.:..:
NP_001 GAVIQSVPGFWANVIANHPQMSALITDEDEDMLSYMVSLEVGEEKHPVHLCKIMLFFRSN
150 160 170 180 190 200
320 330 340 350 360 370
pF1KB8 PYFTNMVIVKEFQRNRSGRLVSHSTPIRWHRGQEPQARRHGNQDASHSFFSWFSNHSLPE
::: : ::.::. : . .::::::.:. : .: :. ....: .::.:::.:..
NP_001 PYFQNKVITKEYLVNITEYRASHSTPIEWYPDYEVEAYRRRHHNSSLNFFNWFSDHNFAG
210 220 230 240 250 260
380 390 400 410 420 430
pF1KB8 ADRIAEIIKNDLWVNPLRYYLRERGSRIKRKKQEMKKRKTRGRCEVVIMEDAPDYYAVED
...::: .: : :.: :.
NP_001 SNKIAE--------SPDRSYVRTCGAIPCNTTRG
270 280 290
>>NP_003002 (OMIM: 600960) protein SET isoform 2 [Homo s (277 aa)
initn: 549 init1: 402 opt: 405 Z-score: 239.3 bits: 53.4 E(85289): 1.4e-06
Smith-Waterman score: 539; 37.9% identity (76.4% similar) in 203 aa overlap (203-396:22-221)
180 190 200 210 220 230
pF1KB8 EDEDEDERESMRSSRRRRRRRRRKQRKVKRESRERNAERMESILQALEDIQLDLEAVNIK
:. :. :..:.: . ....: ... .: .
NP_003 MSAPAAKVSKKELNSNHDGADETSEK--EQQEAI-EHIDEVQNEIDRLNEQ
10 20 30 40
240 250 260 270 280 290
pF1KB8 AGKAFLRLKRKFIQMRRPFLERRDLIIQHIPGFWVKAFLNHPRISILINRRDEDIFRYLT
:.. .:....:. ..:.::...:. .: .::.::: .:.:::..: :....::. ..:::
NP_003 ASEEILKVEQKYNKLRQPFFQKRSELIAKIPNFWVTTFVNHPQVSALLGEEDEEALHYLT
50 60 70 80 90 100
300 310 320 330 340
pF1KB8 NLQVQDLRHISMGYKMKLYFQTNPYFTNMVIVKEFQRNRSGRLVSHSTPIRWHRGQE---
..: ... :. ::.. .::. :::: : :. :::. :.:: :.:: :.:. :..
NP_003 RVEVTEFEDIKSGYRIDFYFDENPYFENKVLSKEFHLNESGDPSSKSTEIKWKSGKDLTK
110 120 130 140 150 160
350 360 370 380 390 400
pF1KB8 ------PQARRHGNQDASHSFFSWFSNHSLPEADRIAEIIKNDLWVNPLRYYLRERGSRI
.: :. ... .:::.::..:: ::...:.::.:.: :::.:::
NP_003 RSSQTQNKASRKRQHEEPESFFTWFTDHSDAGADELGEVIKDDIWPNPLQYYLVPDMDDE
170 180 190 200 210 220
410 420 430 440 450 460
pF1KB8 KRKKQEMKKRKTRGRCEVVIMEDAPDYYAVEDIFSEISDIDETIHDIKISDFMETTDYFE
NP_003 EGEGEEDDDDDEEEEGLEDIDEEGDEDEGEEDEDDDEGEEGEEDEGEDD
230 240 250 260 270
693 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 14:38:02 2016 done: Fri Nov 4 14:38:04 2016
Total Scan time: 13.150 Total Display time: 0.110
Function used was FASTA [36.3.4 Apr, 2011]