GENSCAN 1.0	Date run:  4-Nov-116	Time: 14:29:58

Sequence gi568815586r:10520147_10734618 : 214472 bp : 37.52% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.02 PlyA -   1977   1972    6                               1.05
 1.01 Sngl -  17680  17231  450  1  0   27   53   303 0.940  16.66
 1.00 Prom -  24070  24031   40                              -6.45

 2.03 PlyA -  24598  24593    6                               1.05
 2.02 Term -  31305  31200  106  2  1   53   45   168 0.532   5.90
 2.01 Init -  42132  42080   53  0  2   68   98     2 0.092  -0.12
 2.00 Prom -  44828  44789   40                              -3.75

 3.00 Prom +  50107  50146   40                              -4.95
 3.01 Sngl +  50954  51124  171  1  0   48   49   211 0.937   7.78
 3.02 PlyA +  52358  52363    6                               1.05

 4.09 PlyA -  53200  53195    6                               1.05
 4.08 Term -  60979  60550  430  0  1   80   44   201 0.033   8.69
 4.07 Intr -  61284  61212   73  1  1   56   80    35 0.010  -2.95
 4.06 Intr -  75781  75545  237  2  0   21   87   104 0.281   0.26
 4.05 Intr -  78063  77897  167  2  2   96   91    76 0.537   7.38
 4.04 Intr -  87790  87708   83  1  2   77  106    56 0.948   3.82
 4.03 Intr -  89795  89685  111  2  0   60   72   134 0.988   8.66
 4.02 Intr -  90534  90476   59  1  2  117  107    29 0.998   5.38
 4.01 Init -  93386  93293   94  2  1   82   93    54 0.977   5.89
 4.00 Prom -  94184  94145   40                              -7.25

 5.10 PlyA -  96517  96512    6                               1.05
 5.09 Term - 100202  99998  205  1  1  106   49   274 0.970  21.16
 5.08 Intr - 104713 104505  209  1  2   85    9    80 0.187  -3.25
 5.07 Intr - 107578 107495   84  1  0  107   99    82 0.977  10.30
 5.06 Intr - 109528 109347  182  2  2  128   88   131 0.991  15.77
 5.05 Intr - 111162 110899  264  1  0   90   93   214 0.999  18.66
 5.04 Intr - 113978 113844  135  0  0   58   98    97 0.983   7.32
 5.03 Intr - 114540 114421  120  1  0   40  103    77 0.159   3.95
 5.02 Intr - 121911 121839   73  0  1   94   61     5 0.028  -3.54
 5.01 Init - 122180 122103   78  2  0   84  110    14 0.412   4.31
 5.00 Prom - 131114 131075   40                              -4.05

 6.03 PlyA - 131136 131131    6                               1.05
 6.02 Term - 141405 141202  204  0  0   49   32   159 0.212   2.79
 6.01 Init - 154101 153808  294  0  0   42   39   228 0.569  10.53
 6.00 Prom - 155668 155629   40                              -5.05

 7.03 PlyA - 157017 157012    6                               1.05
 7.02 Term - 159953 159873   81  2  0   90   34   116 0.375   3.11
 7.01 Init - 176098 175913  186  1  0   65   60   127 0.129   6.71
 7.00 Prom - 179976 179937   40                              -3.95

 8.14 PlyA - 180737 180732    6                               1.05
 8.13 Term - 181207 181142   66  1  0  104   41    37 0.650  -2.44
 8.12 Intr - 181988 181814  175  1  1   94   84   186 0.927  17.82
 8.11 Intr - 184002 183905   98  0  2  109   77   166 0.578  15.49
 8.10 Intr - 186102 186031   72  0  0   56  102    41 0.174   0.98
 8.09 Intr - 189968 189762  207  2  0   59   98   300 0.924  26.45
 8.08 Intr - 193187 193065  123  2  0  103   63   295 0.999  28.36
 8.07 Intr - 195637 195548   90  1  0   99  100   135 0.998  15.07
 8.06 Intr - 197562 197497   66  0  0   61   55    90 0.691   1.18
 8.05 Intr - 202415 201921  495  2  0   56   43   406 0.671  25.16
 8.04 Intr - 202557 202509   49  2  1   49   99    42 0.398  -0.84
 8.03 Intr - 202805 202704  102  1  0   60  109    94 0.118   7.07
 8.02 Intr - 211013 210872  142  0  1  100   91    34 0.089   3.39
 8.01 Intr - 212926 212825  102  2  0  112   58    64 0.625   5.03

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl -  61080  60550  531  0  0   70   44   277 0.872  15.35


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586r:10520147_10734618|GENSCAN_predicted_peptide_1|149_aa
MVQAPSLGSFPHAVESVGVQKSRIKVWESPPGFQRLYGDTWMSKQKFAAGEGPSWRTSAR
AVWKGNVGLKPPHRVSTGALPSGAVRKGPPSSKPQNGRSTNGLHGVPGKAADTQCQPVKA
GGRLYPAKPQGWSYPRPWKPTSCISVTWM

>gi568815586r:10520147_10734618|GENSCAN_predicted_CDS_1|450_bp
atggtgcaagctccaagccttggcagctttccacatgctgttgagtctgtgggtgtacag
aagtcaagaataaaggtttgggaatctccacctggatttcagaggctctatggagacacc
tggatgtccaagcagaagtttgctgcaggggagggaccttcctggagaacctctgctagg
gcagtgtggaagggaaatgtgggattgaagcccccacacagagtctccactggggcacta
cctagtggagctgtgagaaaagggccaccgtcctccaaacctcagaatggtagatccacc
aatggcttgcatggtgtgcctggaaaagctgcagacactcagtgccagcctgtgaaagca
ggagggaggctataccctgcaaagccacaggggtggagctacccaagaccatggaaaccc
acctcttgcatcagtgtgacctggatgtga

>gi568815586r:10520147_10734618|GENSCAN_predicted_peptide_2|52_aa
MVHTQDFTLALLELSNTSGVLEPLHLSPNGIRCAARTRFTGSMGAFVKIVRR

>gi568815586r:10520147_10734618|GENSCAN_predicted_CDS_2|159_bp
atggtacacactcaagattttaccttagcattattggaattgtcaaataccagtggtgtc
ctggagcccctgcacctgtctccaaatggtatccgctgtgccgccaggacgcgcttcact
ggcagcatgggtgcctttgtgaagattgtgaggcgctag

>gi568815586r:10520147_10734618|GENSCAN_predicted_peptide_3|56_aa
MCNKKSRGQETEGCRQLNSIINAIRCLNPSNLLRLDMWTTLWPHIAAIAPDQYSWQ

>gi568815586r:10520147_10734618|GENSCAN_predicted_CDS_3|171_bp
atgtgtaataaaaagtctagaggtcaagagactgagggctgtcggcagctcaacagcatc
atcaatgccattcgctgtctaaatccttctaatcttctgcgtttggacatgtggacaacc
ttgtggccacacatagctgccatagccccagatcagtattcatggcaatga

>gi568815586r:10520147_10734618|GENSCAN_predicted_peptide_4|417_aa
MAVASDFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDVMIRKEAYVHKSVME
ELKRIIDDSEITKEDDALWPPPDRVGRQELEIVIGDEHISFTTSKIGSLIDVNQSKNHPI
SGFECKTYLLTLKMNDQGEIYSTLRFLQSPSESQNRLRPDDTQRPGKTDDKVFQCIQEKH
QRQEILRNCSEKYIMQNDNYLKEQILTNKTLKFDVLKNSFQQKKELDSRLIQKNRCHREN
EIVFKVLQNTGLKPQNFAVSVIALKGGPSSVCCSRALIAPFYRVLIGPFLQSADWCVYKP
LARHRVLIGAFLQSADWCIYKPLARHRELIGAFLQSADWCIYKPLARHRELIGAFLHSTD
WCVSKPLARHRVLIGAFLQSTDWCIYKPLARHRELIGAFLQSADWCVYKPLARQSTD

>gi568815586r:10520147_10734618|GENSCAN_predicted_CDS_4|1254_bp
atggctgtggctagcgatttctacctgcgctactacgtagggcacaagggcaagtttggg
cacgagtttctggagttcgaatttcggccggacggaaagcttagatatgccaacaacagc
aattacaaaaatgatgtcatgatcagaaaagaggcttatgtgcacaagagtgtaatggaa
gaactgaagagaattattgatgacagtgaaattacaaaagaagatgatgctttgtggcct
ccccctgatagggttggccgacaggagcttgaaattgtaattggagatgagcacatatct
tttaccacatcaaaaataggttctcttattgatgtaaatcagtcaaaaaaccatcctatt
tcaggatttgaatgcaaaacttaccttcttactctaaagatgaatgatcagggagagatt
tattcaaccctgagatttttgcagtctccttcagagtcacagaatagattaaggcctgat
gatactcaaaggcctgggaaaactgatgacaaagtctttcagtgtattcaagaaaaacat
caacggcaggaaattctaagaaactgtagtgaaaagtacatcatgcaaaatgacaactac
ttaaaagagcagattttgacaaataagactttaaaatttgacgttctcaaaaatagcttt
cagcagaaaaaggaactggattcacgccttatacaaaagaacagatgtcatagagaaaat
gagatcgtttttaaagttttgcaaaatacaggattgaaaccacagaacttcgcagttagt
gttatagctcttaaaggtggcccatccagtgtttgttgctcccgagcactgattgctcca
ttttacagagtgctgattggtccgtttttacagagtgctgattggtgtgtttacaaacct
ttagctagacacagagtgctgattggtgcatttttacagagtgctgattggtgcatttac
aaacctttagctagacacagagagctgattggtgcatttttacagagtgctgattggtgc
atttacaaacctttagctagacacagagagctgattggtgcatttttacacagtactgat
tggtgcgtttccaaacctttagctagacacagagtgctgattggtgcatttttacagagt
actgattggtgcatttacaaacctttagctagacacagagagctgattggtgcattttta
cagagtgccgattggtgcgtttacaaacctttagccagacagagcactgattga

>gi568815586r:10520147_10734618|GENSCAN_predicted_peptide_5|449_aa
MNDRNEIQMEAKLQSLTIIAQEILCRFFITLRRHARFLLTKLGRQGMARSGITHSCAVCI
LCGPSREGDSPVAMGMTRMLLECSLSDKLCVIQEKQYEVIIVPTLLVTIFLILLGVILWL
FIREQRTQQQRSGPQGIAPVPPPRDLSWEAGHGGNVALPLKETSVENFLGATTPALAKLQ
VPREQLSEVLEQICSGSCGPIFRANMNTGDPSKPKSVILKALKEPAGLHEVQDFLGRIQF
HQYLGKHKNLVQLEGCCTEKLPLYMVLEDVAQGDLLSFLWTCRRDVMTMDGLLYDLTEKQ
VYHIGKQVLLALEFLQEKHLFHGDVAARNILMQSDLTAKLCGLGLAYEVYTRGAISSTQT
IPLKWLAPERLLLRPASIRADVYSIMKSCWRWREADRPSPRELRLRLEAAIKTADDEAVL
QVPELVVPELYAAVAGIRVESLFYNYSML

>gi568815586r:10520147_10734618|GENSCAN_predicted_CDS_5|1350_bp
atgaatgataggaatgagattcaaatggaagccaaactccaaagtcttaccattatagca
caggaaattctatgcaggttctttattacccttaggagacatgcacgtttcctgctcact
aaactaggaaggcaaggaatggcaaggtcaggaattactcacagctgtgctgtgtgcatt
ctctgtgggcctagcagggaaggggacagccctgtggcaatgggcatgacacggatgctc
ctggaatgcagtctcagtgacaagttgtgtgtcatccaggagaagcagtatgaagtgatt
atcgtcccaactttgttggttactatcttcctcatccttcttggggtcatcctgtggctt
tttatcagagaacaaagaactcaacagcagcgttctggacctcaaggcattgcccctgtt
cctccacctagggacctaagctgggaagcaggacatggaggaaatgtggctttgccactt
aaggagacatccgtggaaaactttctgggagctaccacacctgccctggctaagctgcag
gtgccgcgggagcaactctctgaagttctggagcagatttgcagtggtagctgtgggccc
atctttcgagccaatatgaacactggggacccttctaagcccaagagtgttattctcaag
gctttaaaagaaccagctgggctccatgaggtacaagatttcttagggcgaatccaattc
catcaatacctggggaaacacaaaaacctggtgcagctggaaggctgctgcactgaaaag
ctgccactctatatggtgttggaggatgtggcccagggggacctgctcagctttctctgg
acctgtcggcgggatgtgatgactatggatggtcttctctatgatctcacagaaaaacaa
gtatatcacatcggaaagcaggtccttttggcgctggaattcctgcaggagaagcatttg
ttccatggggatgtggcagccaggaatattctgatgcaaagtgatctcactgctaagctc
tgtggattaggcctggcttatgaagtttacacccgaggggccatctcctctactcaaacc
atacctctcaagtggcttgccccagaacggcttctcctgagacctgctagcatcagagca
gatgtgtacagtatcatgaagtcctgctggcgctggcgtgaggctgaccgcccctcacct
agagagctgcgcttgcgcctagaagctgccattaaaactgcagatgacgaggctgtgtta
caagtaccagagttggtggtacctgaactgtatgcagctgtggccggcatcagagtggag
agcctcttctacaactatagcatgctttga

>gi568815586r:10520147_10734618|GENSCAN_predicted_peptide_6|165_aa
MSIDQQQVQPLQLQQRFPVARVWRVPETSEPADFPSREPARTPSFAGSHAPQWEGGTEKH
FLEAGTPCPTQPCHYFPSDWAGAIGNRSDQRRDTVVNGVIVGIKTSIKEVCVKDKYQLRN
SRAGWIPKQIASLGLLAGLCSMQMCEESGFCARGGRDDTDQEYNI

>gi568815586r:10520147_10734618|GENSCAN_predicted_CDS_6|498_bp
atgagtatagatcagcaacaagtccagcctttacagttgcagcagaggtttcctgtggct
cgagtgtggcgagtcccggaaacctcggagcccgcagacttcccttcgcgggagcccgcc
cgaactccatcctttgccggcagccacgccccgcagtgggaaggagggactgaaaagcat
ttccttgaggctggcacaccttgccctacccaaccctgtcattatttcccctccgactgg
gccggtgccatcggaaaccggagtgaccagaggagggacacggtagtgaacggggtaata
gtgggaatcaaaaccagtatcaaggaagtttgtgttaaagacaaatatcagttaaggaat
agcagagcagggtggattccaaagcagattgcttcacttggtttattggctggactgtgc
tccatgcagatgtgtgaagagtctgggttttgtgcaagaggaggaagagatgacacggat
caagaatataacatctaa

>gi568815586r:10520147_10734618|GENSCAN_predicted_peptide_7|88_aa
MTGVLVRSNTRDMRAQGGGHLKKLQEEGRPSASHGEASVNQTCQHLDLGLPTSRPEKRNF
CRGEYSLLEETDKETTNEKRSGTEKKEG

>gi568815586r:10520147_10734618|GENSCAN_predicted_CDS_7|267_bp
atgactggtgttcttgtgaggagcaacaccagagacatgcgtgcacaggggggtggccat
ttgaagaagttgcaagaggaaggaaggccatctgcaagccacggagaggcctcagtgaac
caaacctgccagcaccttgatcttggacttccaacctccagacctgagaaaaggaatttc
tgtcgtggagaatatagcctattagaagaaacagacaaggaaactacaaatgagaaacgc
tctggtaccgagaagaaagaaggatag

>gi568815586r:10520147_10734618|GENSCAN_predicted_peptide_8|595_aa
XPSNDWTQLEARAKKPVEAVQSGSFSGAQSREKNGNERDPLITKFTLNRRWSPCGAKGIS
NPNPAFSRQTSNSNSTVAYFCRKPRWGRGPRSHGHRGRRLFSHRRRQRRRGEKSSRGLRV
PSAGRLPCRRSQTGTVADSRGGKCLRLEKKGEAVWERGPWVGMDVGEGPTRGPGALGSLL
GIWERRAFPLGKRRALEGDGEGKIEKLLARKGQVSVPDALPTWAWERRHAPVGHMPAKRC
CNRLRETWVLVPRLPPPLCAHGCKQPFSVHQWLHASLFPDCGNARGVAAEKTLSEVGVLV
KAPLSEQLSIEVNSAEKQITAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPD
GVPVEGSRYAADRRRYRRGYYGRRRGPPRNYAGEEEEEGSGSSEGFDPPATDRQFSGARN
QLRRPQYRPQYRQRRFPPYHVGQTFDRRSRVLPHPNRIQSYPWSLPYPLPHQQLLKPLNG
QIKAGEIGEMKDGVPEGAQLQGPVHRNPTYRPRYRSRGPPRPRPAPAVGEAEDKENQQAT
SGPNQPSVRRGYRRPYNYRRRPRPPNAPSQDGKEAKAGEAPTENPAPPTQQSSAE

>gi568815586r:10520147_10734618|GENSCAN_predicted_CDS_8|1788_bp
ntgccctccaatgattggacccagctggaagccagagcaaagaagcctgtagaagctgtt
caaagtggttcattctctggggcacagagcagggagaaaaatggaaatgagagggatcct
ctgattaccaaatttactctcaacaggcgttggtccccatgtggagcaaaaggcatcagt
aaccccaatccagctttttctcgacagacttctaactcaaacagcactgtggcctatttc
tgcaggaaaccccggtggggacgcggcccccgcagccacgggcaccgcggccgccgcctc
tttagccaccgccgccggcagcgaagacgcggagaaaaaagttctcggggtctccgggtc
cccagcgctggccgcctcccttgccggcgctcccagacgggcactgttgcggattcgcgt
ggtggaaaatgcctgcgtttggagaagaaaggagaggcagtctgggagaggggaccttgg
gtagggatggatgtaggggaaggaccgacacgtgggcctggcgctttggggtccttgctt
gggatctgggaaaggagagcatttcctttggggaagaggagggcgctagaaggagacggg
gagggaaagatagaaaagcttcttgccaggaagggtcaggtgtctgtccctgacgccctt
cccacatgggcatgggaaagacgccatgctcctgttggccacatgccagcaaagagatgt
tgcaatcgtctccgggaaacttgggtcttagtcccacgtcttcctccccctctctgtgcc
cacggctgcaaacagccattcagtgtccaccaatggctacacgcttccctcttcccggac
tgtgggaacgcacgtggtgtagcagctgaaaaaactttgtcggaagtgggggtattggtt
aaagctcctctgtcagagcagctctcaattgaagtaaatagcgcagagaagcagataact
gccatcaagaagaataacccacggaaatatctgcgcagtgtaggagatggagaaactgta
gagtttgatgtggttgaaggagagaagggtgcagaagctgccaatgtgactggcccggat
ggagttcctgtggaagggagtcgttacgctgcagatcggcgccgttacagacgtggctac
tatggaaggcgccgtggccctccccggaattacgctggggaggaggaggaggaagggagc
ggcagcagtgaaggatttgacccccctgccactgataggcagttctctggggcccggaat
cagctgcgccgcccccagtatcgccctcagtaccggcagcggcggttcccgccttaccac
gtgggacagacctttgaccgtcgctcacgggtcttaccccatcccaacagaatacagagt
tacccctggtctctcccttacccgttacctcaccaacaacttctaaagccattaaatggg
cagatcaaggctggtgagattggagagatgaaggatggagtcccagagggagcacaactt
cagggaccggttcatcgaaatccaacttaccgcccaaggtaccgtagcaggggacctcct
cgcccacgacctgccccagcagttggagaggctgaagataaagaaaatcagcaagccacc
agtggtccaaaccagccgtctgttcgccgtggataccggcgtccctacaattaccggcgt
cgcccgcgtcctcctaacgctccttcacaagatggcaaagaggccaaggcaggtgaagca
ccaactgagaaccctgctccacccacccagcagagcagtgctgagtaa