GENSCAN 1.0	Date run:  4-Nov-116	Time: 14:25:17

Sequence gi568815591r:74943035_75173645 : 230611 bp : 49.90% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  10056  10140   85  2  1   79   77    47 0.788   3.68
 1.02 Intr +  21464  22064  601  0  1   75  115   301 0.039  23.07
 1.03 Intr +  64960  65030   71  1  2   88   97    76 0.785   7.33
 1.04 Intr +  71155  71268  114  2  0   50   34    93 0.377   0.52
 1.05 Intr +  72005  72094   90  0  0   71   91    24 0.416   0.97
 1.06 Intr +  74564  74757  194  0  2  107   93   340 0.996  35.61
 1.07 Intr +  74956  75088  133  0  1   87   80   289 0.999  28.22
 1.08 Intr +  75938  76061  124  0  1  102   45   125 0.996   9.24
 1.09 Intr +  77005  77115  111  1  0   70   83   312 0.999  28.39
 1.10 Intr +  78840  78922   83  0  2   70   97    54 0.964   3.78
 1.11 Intr +  81406  81500   95  2  2   63   70   147 0.917  10.08
 1.12 Intr +  81600  81641   42  2  0   86   82    94 0.239   7.04
 1.13 Term +  89606  89644   39  1  0  104   42    47 0.083  -1.11
 1.14 PlyA +  90832  90837    6                               1.05

 2.12 PlyA -  91686  91681    6                               1.05
 2.11 Term - 100075  99998   78  1  0   87   40    95 0.188   2.36
 2.10 Intr - 109762 109677   86  2  2  126   86    50 0.837   8.14
 2.09 Intr - 113040 112867  174  1  0   83  100   147 0.993  15.31
 2.08 Intr - 114582 114495   88  0  1   95   93   -43 0.918  -3.56
 2.07 Intr - 115735 115554  182  2  2   57   85   211 0.954  17.29
 2.06 Intr - 118257 118173   85  0  1  102   80     3 0.887   0.29
 2.05 Intr - 120309 120258   52  2  1   52  110    67 0.921   4.21
 2.04 Intr - 121614 121548   67  1  1   43  109    41 0.897  -0.34
 2.03 Intr - 123758 123630  129  0  0   96  105    58 0.956   8.97
 2.02 Intr - 127735 127606  130  1  1   61   61   100 0.835   4.87
 2.01 Init - 130703 130380  324  2  0   81   56   512 0.746  42.63
 2.00 Prom - 134135 134096   40                              -6.56

 3.00 Prom + 136223 136262   40                              -3.46
 3.01 Init + 151515 151995  481  2  1   87  110   331 0.705  30.72
 3.02 Intr + 165926 166029  104  0  2   95   81    70 0.530   6.89
 3.03 Intr + 169363 169501  139  0  1   91   43   156 0.898  11.44
 3.04 Intr + 180102 180285  184  1  1   73   29   120 0.544   3.45
 3.05 Intr + 180454 180482   29  1  2   87  106    -8 0.374  -1.34
 3.06 Intr + 182882 182936   55  0  1  103   93    16 0.583   1.64
 3.07 Intr + 183308 183351   44  2  2  128   68    45 0.973   4.38
 3.08 Intr + 191967 192023   57  1  0   98   72    44 0.859   2.66
 3.09 Intr + 193751 193816   66  0  0   64   96    73 0.866   4.58
 3.10 Intr + 195916 195993   78  2  0   76   80    73 0.962   4.82
 3.11 Intr + 198069 198152   84  1  0   72  111    43 0.965   4.79
 3.12 Intr + 199448 199631  184  0  1  108  111   147 0.988  17.85
 3.13 Intr + 200916 200959   44  0  2  108   94   -12 0.345  -0.72
 3.14 Term + 204660 206263 1604  1  2   38   45  1615 0.825 142.49
 3.15 PlyA + 207884 207889    6                               1.05

 4.12 PlyA - 208320 208315    6                               1.05
 4.11 Term - 213881 213760  122  0  2  119   54   259 0.999  24.24
 4.10 Intr - 214361 214216  146  1  2   77  109   239 0.837  24.83
 4.09 Intr - 214936 214832  105  0  0   89  115    90 0.993  11.13
 4.08 Intr - 217742 217625  118  0  1   71   91   202 0.939  18.32
 4.07 Intr - 219399 219292  108  1  0   90   49    92 0.980   5.76
 4.06 Intr - 219985 219863  123  2  0  123   41   327 0.998  32.06
 4.05 Intr - 222145 222090   56  0  2   99   94    32 0.981   3.52
 4.04 Intr - 223668 223503  166  1  1   78   81   305 0.990  27.82
 4.03 Intr - 223843 223768   76  1  1   68   99    18 0.980  -0.01
 4.02 Intr - 225804 225598  207  0  0   78   84   226 0.882  20.47
 4.01 Init - 228909 228838   72  0  0   88   73   146 0.813  14.17

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  10959  11005   47  1  2  100   54    47 0.862  -0.13


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591r:74943035_75173645|GENSCAN_predicted_peptide_1|593_aa
MVPASAASEDRRKLPIIVEDEGGPTRSRVLRVPALLHFPCTGLPVAPAAQPPRQQQQQQH
RGSPPPGGLQVPAGRARAAHAQRGPAFEWQVVCYSEHQLLPAPGAARRCSAARPLGCCSA
GAASLAPRLPLATWRASSLLSGPARPPPPPAPGAELPGLRAGCRCRQGAEGAGAAARPPA
DEPPRTGRGRTMELHILEHRLQVASVAKESIPLFTYGLIKLAFLSSKTRCKFFSLTETPE
DYTIIVDEEGFLVPLSVNWGQRYIIVVHATHGKAWSGGSDRSKGGEVAGQATHWLTTGPS
QPAGPMGSLGCGHHGDRSWAELPSSEHLSVADATWLALNVVSGGGSFSSSQPIGVTKIAK
SVIAPLADQNISVFMLSTYQTDFILVRERDLPFVTHTLSSEFTILRVVNGETVAAENLGI
TNGFVKPKLVQRPVIHPLSSPSNRFCVTSLDPDTLPAVATLLMDVMFYSNGVKDPMATGD
DCGHIRFFSFSLIEGYISLVMDVQTQQRFPSNLLFTSASGELWKMVRIGGQPLGFDECGI
VAQISEPLAAADIPAYYISTFKFDHALVPEENINGVISALKEENLETGSENGS

>gi568815591r:74943035_75173645|GENSCAN_predicted_CDS_1|1782_bp
atggtgccagcatctgctgctagtgaggaccgcaggaagcttcctatcatagtggaagat
gaaggggggccgacaagatcacgtgtcctgagggtgcccgcgctcctgcatttcccgtgc
accgggctgccggtagctccggccgcccagcccccgcggcagcaacagcagcaacagcac
cgggggagcccccccccaggcggactacaagtcccggcaggccgcgcgcgggccgcgcat
gcgcagcggggaccggcgtttgagtggcaagttgtttgttacagcgaacaccagctgctc
cccgcgccgggcgccgcgcgccgctgctccgccgctcggcccctcggctgctgctccgcc
ggcgctgcctccctcgccccgcggctcccccttgcaacttggcgggcctcctcccttttg
tccggcccggcccggccgccgccgccccccgcgcccggcgccgagctcccgggtctccgg
gccggctgtcggtgccggcagggcgcggagggggcgggggccgcggctcgtccccccgcg
gatgagccgccgcggacggggcgcgggcggacgatggaactccacatcctggagcaccgg
ctgcaagttgccagcgtcgccaaggagagtatcccgctgttcacctacggcctgatcaaa
cttgccttcctgtcctccaagaccaggtgcaagttcttcagtctgactgagacgccagag
gattacactatcattgtcgatgaggaaggattcctagtccccttgtctgtgaactgggga
cagcggtacatcattgtggtccatgccacgcatggcaaggcatggtcaggaggcagtgac
cgatcaaaaggtggagaggtggccgggcaagccacccactggctgaccactggtccttct
cagccagcgggaccaatgggctccttgggctgtggtcaccatggtgaccggagctgggca
gagctgccctcctcggagcacctgagtgtggcagatgccacctggctggccctgaacgtg
gtgtccggcggtggcagcttctccagctcccagcccatcggcgtgaccaagatcgccaag
tcagtcatcgccccactggctgaccagaacatatccgtgttcatgctgtccacgtatcag
acagacttcatcctggtgcgcgagcgggacctgccctttgtcacccacacattgtcatca
gagttcaccatcctgcgggtcgtcaatggcgagaccgtggcagccgagaacctcggcatc
accaatggcttcgtgaagcccaagctggtccagaggccagtcatccacccactgtccagc
ccgagcaacaggttctgtgtcaccagcctggaccctgacacgctgcctgctgttgccaca
ctcctcatggatgtcatgttctactccaatggagtgaaggaccccatggccactggggat
gactgcggccacatccgcttcttctccttctccctcatcgagggctacatctccctggtg
atggacgtgcagacgcagcagaggtttcctagtaacttgctgttcacaagcgcatccgga
gagctctggaagatggtccggattggaggacagcccctggggtttgatgagtgtggcatc
gtggcccagatctcagagcccttggctgctgcagacatcccagcctactacatcagtact
ttcaagtttgatcatgcacttgtccccgaagagaacatcaatggtgtcatcagtgccctg
aaggaagagaacctggagaccgggagtgaaaatggaagctga

>gi568815591r:74943035_75173645|GENSCAN_predicted_peptide_2|464_aa
MALVALVAGARLGRRLSGPGLGRGHWTAAGRSRSRREAAEAEAEVPVVQYVGERAARADR
VFVWGFSFSGALGVPSFVVPSSGPGPRAGARPRRRIQPVPYRLELDQKISSAACGYGFTL
LSSKTADVTKVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVSLPLDRPQETRVLQVS
CGRAHSLVLTDREGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQDFDGQVVQVACGQD
HSLFLTDKGEVYSCGWGADGQTGLGHYNITSSPTKLGGDLAGVNVIQVATYGDCCLAVSA
DGGLFGWGNSEYLQLASVTDSTQVNVPRCLHFSGVGKVRQAACGGTGCAVLNGEGHVFVW
GYGILGKGPNLVESAVPEMIPPTLFGLTEFNPEIQVSRIRCGLSHFAALTNKGELFVWGK
NIRGCLGIGRLEDQYFPWRVTMPGEPVDVACGVDHMVTLAKSFI

>gi568815591r:74943035_75173645|GENSCAN_predicted_CDS_2|1395_bp
atggcgctggtggcgttggtggctggggctcggctggggcggcggctgagcgggccgggg
ctggggcgagggcactggacggcggccgggcgctcccggagccggcgcgaagcggcagaa
gccgaggcggaggtgcccgtggtccagtacgtgggcgagcgcgctgcccgcgccgatcgc
gtcttcgtgtggggcttcagcttctcgggggcgctgggcgtgccttcctttgtggtgccc
agctccgggcccgggccccgcgccggcgcccgaccgcgccgcaggatccagcccgtgccc
tatcgcctggagctggaccaaaagatttcatctgctgcttgcggctatggattcacactg
ctgtcctctaagactgcggatgttacgaaagtctgggggatgggactcaacaaagattct
cagcttggatttcacaggagccggaaagataaaacgaggggctacgagtatgtgttggag
ccctcacccgtctccctgcctctggacagacctcaggagacacgggtgctgcaggtctcc
tgcggccgagctcactctcttgtgttgactgacagggaaggagtcttcagcatgggaaac
aattcttatgggcaatgtggaagaaaggtggtcgaaaatgaaatttacagtgaaagtcac
agagtccacaggatgcaggacttcgatggccaggtggtccaggtcgcctgtggtcaggat
catagtctgttcctgacggataaaggagaagtctattcttgtggatggggtgctgatggg
caaacaggtctgggtcactacaatatcaccagctcgcccaccaagctgggtggagacctg
gcgggagtgaacgttatccaagttgccacctacggtgattgctgcctggccgtgtccgcc
gacggaggactttttggttggggaaactcggagtacctgcagctggcctctgtcactgac
tccacacaggtgaatgtgccccgctgcttacacttctcaggagtggggaaggtgcgacag
gctgcatgcggtggcacgggctgtgcagtgttaaacggagaaggacatgtttttgtctgg
ggctatggaattcttgggaaaggtccaaacctagtggaaagtgccgtccctgaaatgatt
ccacccactctctttggcttgacggagttcaacccagaaatccaggtttcccgcatccga
tgtggactcagccactttgctgcactgaccaacaaaggagagctgtttgtatggggcaag
aacatccgagggtgcctgggaatcggtcgcctggaggaccagtatttcccatggagggtg
acgatgcctggggagcctgtggacgtggcatgtggcgtggaccacatggtgaccctggcc
aagtcattcatctaa

>gi568815591r:74943035_75173645|GENSCAN_predicted_peptide_3|1050_aa
MAPKHKSSDAGNLDRPKRSRKVLPLSEKVKVLDLIRKDKKSYAEVAKIYGKNESSIREIV
KKEKEIRASFAVSPPTAKVTATVRDKCLVKMEQALHLWVEEMNRKRVPIDSNMLRQKALS
LYQDFCKGCSETDTKPFTASKGWLHRFRHRFSHHYKKKKKGIMAQVAVSTLPVEEESSSE
TRMVVTFLVSALESMCKELAKSKAEVACIAVYETDVFVVGTERGCAFVNARTDFQKDFAK
YCKALGTTVMVPVPYEKMLRDQSAVVVQGLPEGVAFQHPENYDLATLKWILENKAGISFI
INRPFLGPESQLGGPGMVTDAERSIVSPSESCGPINVKTEPMEDSGSHPSSTSNEVIEME
LPMEDSTPLVPSEEPNEDPEAEVKIEGNTNSSSVTNSAAGVEDLNIVQVTVPDNEKERLS
SIEKIKQLREQVNDLFSRKFGEAIGVDFPVKVPYRKITFNPGCVVIDGMPPGVVFKAPGY
LEISSMRRILEAAEFIKFTVIRPLPGLELSNGEYSTVGKRKIDQEGRVFQEKWERAYFFV
EVQNIPTCLICKQSMSVSKEYNLRRHYQTNHSKHYDQYTERMRDEKLHELKKGLRKYLLG
SSDTECPEQKQVFANPSPTQKSPVQPVEDLAGNLWEKLREKIRSFVAYSIAIDEITDINN
TTQLAIFIRGVDENFDVSEELLDTVPMTGTKSGNEIFLRVEKSLKKFCINWSRLVSVAST
GTPAMVDANNGLVTKLKSRVATFCKGAELKSICCIIHPESLCAQKLKMDHVMDVVVKSVN
WICSRGLNHSEFTTLLYELDSQYGSLLYYTEIKWLSRGLVLKRFFESLEEIDSFMSSRGK
PLPQLSSIDWIRDLAFLVDMTMHLNALNISLQGHSQIVTQMYDLIRAFLAKLCLWETHLT
RNNLAHFPTLKLVSRNESDGLNYIPKIAELKTEFQKRLSDFKLYESELTLFSSPFSTKID
SVHEELQMEVIDLQCNTVLKTKYDKVGIPEFYKYLWGSYPKYKHHCAKILSMFGSTYICE
QLFSIMKLSKTKYCSQLKDSQWDSVLHIAT

>gi568815591r:74943035_75173645|GENSCAN_predicted_CDS_3|3153_bp
atggccccaaagcacaagagtagtgatgctgggaatttggataggccaaagagaagccgt
aaagtgcttcctctaagtgaaaaggtgaaagttctcgacttaatcaggaaagacaaaaaa
tcctatgctgaggttgctaagatctacgggaagaatgaatcttccatccgtgaaattgtg
aagaaggaaaaagaaattcgtgctagttttgctgtctcacctccaactgctaaagtgacg
gccacagtgcgtgataagtgcttagttaagatggaacaggcactgcatttgtgggtggaa
gagatgaacagaaaacgtgttcccattgacagcaacatgttgcgccagaaagctttgagc
ctataccaagacttctgcaagggatgctctgaaactgacaccaagccatttactgcgagt
aagggatggttacacagattcaggcatagattctcacatcattacaagaagaagaagaag
gggatcatggcccaggtagcagtgtccaccctgcctgttgaagaagagtcctcctcagag
accaggatggtggtgacattcctcgtgtctgccctcgaatccatgtgtaaagaactggcc
aagtccaaggcagaagtggcctgcatcgcagtgtacgaaacagacgtgtttgtcgtcgga
accgagagaggatgcgcttttgttaatgccaggacggattttcagaaagattttgcaaaa
tactgtaaagccttagggacaacagtgatggtgcctgttccctatgagaagatgctgcga
gaccagtcggctgtggtagtgcaggggcttccggaaggcgttgcctttcaacaccctgag
aattacgaccttgcaaccctgaaatggattttggagaacaaagcagggatttcattcatc
ataaatagacccttcctaggaccagagagtcagctgggtggccctgggatggtaacagat
gcggagagatccatagtatcaccaagtgaaagctgcggccccatcaatgtgaaaactgaa
cccatggaagattctggaagccacccttcttccacaagcaatgaagtaatagaaatggaa
ttaccaatggaagattccactccgctggtcccttcagaagaaccaaatgaggaccctgaa
gccgaggtgaaaatcgaaggaaacacaaattcatccagtgttacaaattctgcagcaggt
gttgaagatcttaacatcgttcaagtgactgttccagataatgagaaggaaagattatca
agcattgaaaagattaaacagctaagagaacaagttaatgacctctttagccgaaaattt
ggtgaagcaattggcgtggatttccctgtgaaagttccctacaggaagatcacattcaac
cctggctgtgtggtgattgatggcatgcccccgggggtggtattcaaggcccccggctat
ctggaaatcagttccatgaggaggatcttggaggcagctgagtttatcaaattcacagtc
atcaggccgcttccagggcttgagctcagtaatggtgagtattctacagtgggaaaacgc
aagatagaccaggagggccgtgtgtttcaagaaaagtgggagagagcgtatttcttcgtg
gaagtacagaatattccaacatgtctcatatgcaaacaaagcatgtctgtgtccaaagaa
tataacctaagacgccactatcaaaccaatcacagcaagcattatgaccagtatacggaa
agaatgcgtgacgagaagcttcacgagctgaaaaaagggctcaggaagtatctcttaggc
tcgtcagacaccgagtgtcccgagcaaaaacaagtgtttgcaaacccaagtccaacccag
aaatcccccgtgcagcctgtagaggacctagctgggaacttatgggagaagttacgtgaa
aaaatcaggtcttttgtggcatattctatcgcaatcgatgagatcacggatataaataat
accacccagttggccatattcatccgtggtgtcgatgagaatttcgatgtgtccgaagaa
cttctggacacggtgcccatgacgggtacaaaatctggcaacgagatctttttgcgtgtt
gagaagagcctgaaaaagttctgtatcaactggtcgagattagtaagcgtggcctccact
ggcaccccagcgatggtggatgccaataacgggcttgtcacaaaactgaagtccagggtg
gcgacgttctgcaagggtgcggaactgaagtccatctgttgtataattcatccggaatca
ctctgtgctcagaagttgaagatggaccacgtcatggacgtggtagtgaagtccgtgaac
tggatatgctcccggggactgaaccacagcgagttcacaaccttgctctatgagctggac
agccagtatggtagcctcctgtactacacggagattaagtggctcagtcgcgggctcgtg
ctaaagagatttttcgaatccttggaagaaatcgactccttcatgtcatccagagggaaa
cccctgcctcaactgagctccatagattggatccgagacctggccttcttggttgacatg
acgatgcatctgaacgctttgaacatctctctccaaggacactcccaaatcgtcacgcag
atgtatgacctgatccgggcgttcctagcaaaactgtgcctctgggagactcatttgacg
aggaataatctggcccactttcccaccctgaaattggtttccagaaatgaaagcgatggc
ctgaactacattcccaaaatcgcggaactcaagaccgaattccagaaaaggctgtctgat
ttcaaactctacgaaagcgaactgactctgttcagctccccgttctccacgaagatcgac
agtgtgcacgaggagctccagatggaggttatcgacctgcaatgcaacacggtcctgaag
acgaaatacgacaaggtgggaataccagaattctacaagtacctctggggtagctacccg
aaatacaagcaccattgcgcaaagattctttccatgttcgggagcacctacatctgcgaa
cagctgttctccattatgaaactgagcaaaacaaaatactgctcccagttaaaggattcc
cagtgggattctgtactccacatcgcaacgtga

>gi568815591r:74943035_75173645|GENSCAN_predicted_peptide_4|432_aa
MGDTFIRHIALLGFEKRFVPSQHYDNCKDGPHPNPLGFLQWVVGSWVHTAKPLWRLNGVP
RLWLSPRYMFLVKWQDLSEKVVYRRFTEIYEFHKTLKEMFPIEAGAINPENRIIPHLPAP
KWFDGQRAAENHQGTLTEYCSTLMSLPTKISRCPHLLDFFKVRPDDLKLPTDNQTKKPET
YLMPKDGKSTATDITGPIILQTYRAIADYEKTSGSEMALSTGDVVEVVEKSESGWWFCQM
KAKRGWIPASFLEPLDSPDETEDPEPNYAGEPYVAIKAYTAVEGDEVSLLEGEAVEVIHK
LLDGWWVIRKDDVTGYFPSMYLQKSGQDVSQAQRQIKRGAPPRRSSIRNAHSIHQRSRKR
LSQDAYRRNSVRFLQQRRRQARPGPQSPGSPLEEERQTQRSKPQPAVPPRPSADLILNRC
SESTKRKLASAV

>gi568815591r:74943035_75173645|GENSCAN_predicted_CDS_4|1299_bp
atgggggacaccttcatccgtcacatcgccctgctgggctttgagaagcgcttcgtaccc
agccagcactatgacaactgcaaagatggtcctcaccccaatcctctgggcttcctccag
tgggtagtgggatcctgggtgcacacagcaaagcctctttggaggctgaatggggtcccc
cgactctggctttcccccaggtacatgttcctggtgaaatggcaggacctgtcggagaag
gtggtctaccggcgcttcaccgagatctacgagttccataaaaccttaaaagaaatgttc
cctattgaggcaggggcgatcaatccagagaacaggatcatcccccacctcccagctccc
aagtggtttgacgggcagcgggccgccgagaaccaccagggcacacttaccgagtactgc
agcacgctcatgagcctgcccaccaagatctcccgctgtccccacctcctcgacttcttc
aaggtgcgccctgatgacctcaagctccccacggacaaccagacaaaaaagccagagaca
tacttgatgcccaaagatggcaagagtaccgcgacagacatcaccggccccatcatcctg
cagacgtaccgcgccattgccgactacgagaagacctcgggctccgagatggctctgtcc
acgggggacgtggtggaggtcgtggagaagagcgagagcggttggtggttctgtcagatg
aaagcaaagcgaggctggatcccagcatccttcctcgagcccctggacagtcctgacgag
acggaagaccctgagcccaactatgcaggtgagccatacgtcgccatcaaggcctacact
gctgtggagggggacgaggtgtccctgctcgagggtgaagctgttgaggtcattcacaag
ctcctggacggctggtgggtcatcaggaaagacgacgtcacaggctactttccgtccatg
tacctgcaaaagtcggggcaagacgtgtcccaggcccaacgccagatcaagcggggggcg
ccgccccgcaggtcgtccatccgcaacgcgcacagcatccatcagcggtcgcggaagcgc
ctcagccaggacgcctatcgccgcaacagcgtccgttttctgcagcagcgacgccgccag
gcgcggccgggaccgcagagccccgggagcccgctcgaggaggagcggcagacgcagcgc
tctaaaccgcagccggcggtgcccccgcggccgagcgccgacctcatcctgaaccgctgc
agcgagagcaccaagcggaagctggcgtctgccgtctga