Result of FASTA (omim) for pF1KB8668
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB8668, 463 aa
  1>>>pF1KB8668 463 - 463 aa - 463 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.1294+/-0.000352; mu= 18.8564+/- 0.022
 mean_var=61.6793+/-12.584, 0's: 0 Z-trim(112.8): 69  B-trim: 1140 in 1/56
 Lambda= 0.163307
 statistics sampled from 21790 (21860) to 21790 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.628), E-opt: 0.2 (0.256), width:  16
 Scan time:  8.820

The best scores are:                                      opt bits E(85289)
NP_003959 (OMIM: 603172) NEDD8-activating enzyme E ( 463) 3097 738.3  1e-212
NP_937838 (OMIM: 603172) NEDD8-activating enzyme E ( 449) 2969 708.1 1.2e-203
XP_011532513 (OMIM: 603172) PREDICTED: NEDD8-activ ( 422) 2482 593.4 3.9e-169
XP_011532512 (OMIM: 603172) PREDICTED: NEDD8-activ ( 436) 2482 593.4  4e-169
NP_005490 (OMIM: 613295) SUMO-activating enzyme su ( 640)  380 98.3 6.7e-20
XP_011532374 (OMIM: 191325) PREDICTED: ubiquitin-l ( 796)  364 94.5 1.1e-18
XP_005265487 (OMIM: 191325) PREDICTED: ubiquitin-l ( 987)  364 94.6 1.3e-18
NP_003326 (OMIM: 191325) ubiquitin-like modifier-a (1012)  364 94.6 1.3e-18
XP_016863848 (OMIM: 611361) PREDICTED: ubiquitin-l (1009)  306 80.9 1.7e-14
NP_060697 (OMIM: 611361) ubiquitin-like modifier-a (1052)  306 80.9 1.8e-14
XP_016881623 (OMIM: 613295) PREDICTED: SUMO-activa ( 608)  244 66.2 2.8e-10
XP_011524606 (OMIM: 613295) PREDICTED: SUMO-activa ( 700)  244 66.2 3.2e-10
XP_005258461 (OMIM: 613295) PREDICTED: SUMO-activa ( 752)  244 66.2 3.4e-10
NP_055299 (OMIM: 609277) adenylyltransferase and s ( 460)  185 52.2 3.4e-06
NP_079094 (OMIM: 610552,617132,617133) ubiquitin-l ( 404)  183 51.7 4.3e-06
NP_001139186 (OMIM: 613294) SUMO-activating enzyme ( 266)  180 50.9 4.9e-06
XP_006723028 (OMIM: 613294) PREDICTED: SUMO-activa ( 281)  180 50.9 5.1e-06
NP_001139185 (OMIM: 613294) SUMO-activating enzyme ( 299)  180 51.0 5.4e-06
NP_005491 (OMIM: 613294) SUMO-activating enzyme su ( 346)  180 51.0 6.1e-06
XP_016881624 (OMIM: 613294) PREDICTED: SUMO-activa ( 349)  180 51.0 6.2e-06
XP_006723026 (OMIM: 613294) PREDICTED: SUMO-activa ( 378)  180 51.0 6.6e-06
NP_938143 (OMIM: 610552,617132,617133) ubiquitin-l ( 348)  172 49.1 2.3e-05
NP_001307139 (OMIM: 610552,617132,617133) ubiquiti ( 348)  172 49.1 2.3e-05
XP_016885269 (OMIM: 301830,314370) PREDICTED: ubiq (1058)  165 47.7 0.00018
XP_016885270 (OMIM: 301830,314370) PREDICTED: ubiq (1058)  165 47.7 0.00018
NP_695012 (OMIM: 301830,314370) ubiquitin-like mod (1058)  165 47.7 0.00018
NP_003325 (OMIM: 301830,314370) ubiquitin-like mod (1058)  165 47.7 0.00018
XP_005272706 (OMIM: 301830,314370) PREDICTED: ubiq (1064)  165 47.7 0.00018
XP_016885268 (OMIM: 301830,314370) PREDICTED: ubiq (1064)  165 47.7 0.00018
XP_011542256 (OMIM: 301830,314370) PREDICTED: ubiq (1072)  165 47.7 0.00018
XP_016885267 (OMIM: 301830,314370) PREDICTED: ubiq (1086)  165 47.7 0.00018
XP_016885266 (OMIM: 301830,314370) PREDICTED: ubiq (1109)  165 47.7 0.00019
NP_001018169 (OMIM: 603385) NEDD8-activating enzym ( 528)  155 45.2 0.00052
NP_003896 (OMIM: 603385) NEDD8-activating enzyme E ( 534)  155 45.2 0.00052
XP_016861043 (OMIM: 608760) PREDICTED: ubiquitin-l ( 390)  149 43.7  0.0011
XP_016861042 (OMIM: 608760) PREDICTED: ubiquitin-l ( 392)  149 43.7  0.0011
NP_001138384 (OMIM: 608760) ubiquitin-like modifie ( 623)  149 43.8  0.0016
XP_016861040 (OMIM: 608760) PREDICTED: ubiquitin-l ( 672)  149 43.8  0.0017
NP_001129503 (OMIM: 608760) ubiquitin-like modifie ( 676)  149 43.8  0.0017
XP_011531588 (OMIM: 608760) PREDICTED: ubiquitin-l ( 676)  149 43.8  0.0017
XP_011531586 (OMIM: 608760) PREDICTED: ubiquitin-l ( 694)  149 43.8  0.0017
XP_011531585 (OMIM: 608760) PREDICTED: ubiquitin-l ( 699)  149 43.8  0.0017
XP_016861037 (OMIM: 608760) PREDICTED: ubiquitin-l ( 699)  149 43.8  0.0017
XP_016861036 (OMIM: 608760) PREDICTED: ubiquitin-l ( 701)  149 43.8  0.0017
XP_016861035 (OMIM: 608760) PREDICTED: ubiquitin-l ( 703)  149 43.8  0.0018
XP_016861033 (OMIM: 608760) PREDICTED: ubiquitin-l ( 703)  149 43.8  0.0018
XP_016861034 (OMIM: 608760) PREDICTED: ubiquitin-l ( 703)  149 43.8  0.0018
NP_006386 (OMIM: 608760) ubiquitin-like modifier-a ( 703)  149 43.8  0.0018
XP_011531584 (OMIM: 608760) PREDICTED: ubiquitin-l ( 703)  149 43.8  0.0018
XP_011531583 (OMIM: 608760) PREDICTED: ubiquitin-l ( 710)  149 43.9  0.0018


>>NP_003959 (OMIM: 603172) NEDD8-activating enzyme E1 ca  (463 aa)
 initn: 3097 init1: 3097 opt: 3097  Z-score: 3939.9  bits: 738.3 E(85289): 1e-212
Smith-Waterman score: 3097; 99.6% identity (99.6% similar) in 463 aa overlap (1-463:1-463)

               10        20        30        40        50        60
pF1KB8 MADGEEPEKKRRRIEELLAEKMAVDGGCGDTGDWEGRWNHVKKFLERSGPFTHPDFEPST
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 MADGEEPEKKRRRIEELLAEKMAVDGGCGDTGDWEGRWNHVKKFLERSGPFTHPDFEPST
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 ESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 ESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDI
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 GRPKAEVAAEFLNDRVPNCNVVPHFYKIQDFNDTFYRQFHIIVCGLDSIIARRWINGMLI
       ::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::
NP_003 GRPKAEVAAEFLNDRVPNCNVVPHFNKIQDFNDTFYRQFHIIVCGLDSIIARRWINGMLI
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB8 SLLNYEDGVLDPSSIVPLIDGGTEGFKGNARVILPGMTACIECTLELYPPQVNFPMCTIA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 SLLNYEDGVLDPSSIVPLIDGGTEGFKGNARVILPGMTACIECTLELYPPQVNFPMCTIA
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB8 SMPRLPEHCIEYVRMLQWPKEQPFGEGVPLGGDDPEHIQWIFQKSLERASQYNIRGVTYR
       :::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::
NP_003 SMPRLPEHCIEYVRMLQWPKEQPFGEGVPLDGDDPEHIQWIFQKSLERASQYNIRGVTYR
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB8 LTQGVVKRIIPAVASTNAVIAAVCATEVFKIATSAYIPLNNYLVFNDVDGLYTYTFEAER
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 LTQGVVKRIIPAVASTNAVIAAVCATEVFKIATSAYIPLNNYLVFNDVDGLYTYTFEAER
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB8 KENCPACSQLPQNIQFSPSAKLQEVLDYLTNSASLQMKSPAITATLEGKNRTLYLQSVTS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 KENCPACSQLPQNIQFSPSAKLQEVLDYLTNSASLQMKSPAITATLEGKNRTLYLQSVTS
              370       380       390       400       410       420

              430       440       450       460   
pF1KB8 IEERTRPNLSKTLKELGLVDGQELAVADVTTPQTVLFKLHFTS
       :::::::::::::::::::::::::::::::::::::::::::
NP_003 IEERTRPNLSKTLKELGLVDGQELAVADVTTPQTVLFKLHFTS
              430       440       450       460   

>>NP_937838 (OMIM: 603172) NEDD8-activating enzyme E1 ca  (449 aa)
 initn: 2969 init1: 2969 opt: 2969  Z-score: 3777.1  bits: 708.1 E(85289): 1.2e-203
Smith-Waterman score: 2976; 96.5% identity (96.5% similar) in 463 aa overlap (1-463:1-449)

               10        20        30        40        50        60
pF1KB8 MADGEEPEKKRRRIEELLAEKMAVDGGCGDTGDWEGRWNHVKKFLERSGPFTHPDFEPST
       :::::::              :::::::::::::::::::::::::::::::::::::::
NP_937 MADGEEP--------------MAVDGGCGDTGDWEGRWNHVKKFLERSGPFTHPDFEPST
                             10        20        30        40      

               70        80        90       100       110       120
pF1KB8 ESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_937 ESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDI
         50        60        70        80        90       100      

              130       140       150       160       170       180
pF1KB8 GRPKAEVAAEFLNDRVPNCNVVPHFYKIQDFNDTFYRQFHIIVCGLDSIIARRWINGMLI
       ::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::
NP_937 GRPKAEVAAEFLNDRVPNCNVVPHFNKIQDFNDTFYRQFHIIVCGLDSIIARRWINGMLI
        110       120       130       140       150       160      

              190       200       210       220       230       240
pF1KB8 SLLNYEDGVLDPSSIVPLIDGGTEGFKGNARVILPGMTACIECTLELYPPQVNFPMCTIA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_937 SLLNYEDGVLDPSSIVPLIDGGTEGFKGNARVILPGMTACIECTLELYPPQVNFPMCTIA
        170       180       190       200       210       220      

              250       260       270       280       290       300
pF1KB8 SMPRLPEHCIEYVRMLQWPKEQPFGEGVPLGGDDPEHIQWIFQKSLERASQYNIRGVTYR
       :::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::
NP_937 SMPRLPEHCIEYVRMLQWPKEQPFGEGVPLDGDDPEHIQWIFQKSLERASQYNIRGVTYR
        230       240       250       260       270       280      

              310       320       330       340       350       360
pF1KB8 LTQGVVKRIIPAVASTNAVIAAVCATEVFKIATSAYIPLNNYLVFNDVDGLYTYTFEAER
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_937 LTQGVVKRIIPAVASTNAVIAAVCATEVFKIATSAYIPLNNYLVFNDVDGLYTYTFEAER
        290       300       310       320       330       340      

              370       380       390       400       410       420
pF1KB8 KENCPACSQLPQNIQFSPSAKLQEVLDYLTNSASLQMKSPAITATLEGKNRTLYLQSVTS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_937 KENCPACSQLPQNIQFSPSAKLQEVLDYLTNSASLQMKSPAITATLEGKNRTLYLQSVTS
        350       360       370       380       390       400      

              430       440       450       460   
pF1KB8 IEERTRPNLSKTLKELGLVDGQELAVADVTTPQTVLFKLHFTS
       :::::::::::::::::::::::::::::::::::::::::::
NP_937 IEERTRPNLSKTLKELGLVDGQELAVADVTTPQTVLFKLHFTS
        410       420       430       440         

>>XP_011532513 (OMIM: 603172) PREDICTED: NEDD8-activatin  (422 aa)
 initn: 2518 init1: 2482 opt: 2482  Z-score: 3157.5  bits: 593.4 E(85289): 3.9e-169
Smith-Waterman score: 2736; 90.7% identity (90.7% similar) in 463 aa overlap (1-463:1-422)

               10        20        30        40        50        60
pF1KB8 MADGEEPEKKRRRIEELLAEKMAVDGGCGDTGDWEGRWNHVKKFLERSGPFTHPDFEPST
       :::::::              :::::::::::::::::::::::::::::::::::::::
XP_011 MADGEEP--------------MAVDGGCGDTGDWEGRWNHVKKFLERSGPFTHPDFEPST
                             10        20        30        40      

               70        80        90       100       110       120
pF1KB8 ESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDI
       :                           ::::::::::::::::::::::::::::::::
XP_011 E---------------------------ALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDI
                                    50        60        70         

              130       140       150       160       170       180
pF1KB8 GRPKAEVAAEFLNDRVPNCNVVPHFYKIQDFNDTFYRQFHIIVCGLDSIIARRWINGMLI
       ::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::
XP_011 GRPKAEVAAEFLNDRVPNCNVVPHFNKIQDFNDTFYRQFHIIVCGLDSIIARRWINGMLI
      80        90       100       110       120       130         

              190       200       210       220       230       240
pF1KB8 SLLNYEDGVLDPSSIVPLIDGGTEGFKGNARVILPGMTACIECTLELYPPQVNFPMCTIA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SLLNYEDGVLDPSSIVPLIDGGTEGFKGNARVILPGMTACIECTLELYPPQVNFPMCTIA
     140       150       160       170       180       190         

              250       260       270       280       290       300
pF1KB8 SMPRLPEHCIEYVRMLQWPKEQPFGEGVPLGGDDPEHIQWIFQKSLERASQYNIRGVTYR
       :::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::
XP_011 SMPRLPEHCIEYVRMLQWPKEQPFGEGVPLDGDDPEHIQWIFQKSLERASQYNIRGVTYR
     200       210       220       230       240       250         

              310       320       330       340       350       360
pF1KB8 LTQGVVKRIIPAVASTNAVIAAVCATEVFKIATSAYIPLNNYLVFNDVDGLYTYTFEAER
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LTQGVVKRIIPAVASTNAVIAAVCATEVFKIATSAYIPLNNYLVFNDVDGLYTYTFEAER
     260       270       280       290       300       310         

              370       380       390       400       410       420
pF1KB8 KENCPACSQLPQNIQFSPSAKLQEVLDYLTNSASLQMKSPAITATLEGKNRTLYLQSVTS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KENCPACSQLPQNIQFSPSAKLQEVLDYLTNSASLQMKSPAITATLEGKNRTLYLQSVTS
     320       330       340       350       360       370         

              430       440       450       460   
pF1KB8 IEERTRPNLSKTLKELGLVDGQELAVADVTTPQTVLFKLHFTS
       :::::::::::::::::::::::::::::::::::::::::::
XP_011 IEERTRPNLSKTLKELGLVDGQELAVADVTTPQTVLFKLHFTS
     380       390       400       410       420  

>>XP_011532512 (OMIM: 603172) PREDICTED: NEDD8-activatin  (436 aa)
 initn: 2482 init1: 2482 opt: 2482  Z-score: 3157.2  bits: 593.4 E(85289): 4e-169
Smith-Waterman score: 2857; 93.7% identity (93.7% similar) in 463 aa overlap (1-463:1-436)

               10        20        30        40        50        60
pF1KB8 MADGEEPEKKRRRIEELLAEKMAVDGGCGDTGDWEGRWNHVKKFLERSGPFTHPDFEPST
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MADGEEPEKKRRRIEELLAEKMAVDGGCGDTGDWEGRWNHVKKFLERSGPFTHPDFEPST
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 ESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDI
       :                           ::::::::::::::::::::::::::::::::
XP_011 E---------------------------ALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDI
                                          70        80        90   

              130       140       150       160       170       180
pF1KB8 GRPKAEVAAEFLNDRVPNCNVVPHFYKIQDFNDTFYRQFHIIVCGLDSIIARRWINGMLI
       ::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::
XP_011 GRPKAEVAAEFLNDRVPNCNVVPHFNKIQDFNDTFYRQFHIIVCGLDSIIARRWINGMLI
           100       110       120       130       140       150   

              190       200       210       220       230       240
pF1KB8 SLLNYEDGVLDPSSIVPLIDGGTEGFKGNARVILPGMTACIECTLELYPPQVNFPMCTIA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SLLNYEDGVLDPSSIVPLIDGGTEGFKGNARVILPGMTACIECTLELYPPQVNFPMCTIA
           160       170       180       190       200       210   

              250       260       270       280       290       300
pF1KB8 SMPRLPEHCIEYVRMLQWPKEQPFGEGVPLGGDDPEHIQWIFQKSLERASQYNIRGVTYR
       :::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::
XP_011 SMPRLPEHCIEYVRMLQWPKEQPFGEGVPLDGDDPEHIQWIFQKSLERASQYNIRGVTYR
           220       230       240       250       260       270   

              310       320       330       340       350       360
pF1KB8 LTQGVVKRIIPAVASTNAVIAAVCATEVFKIATSAYIPLNNYLVFNDVDGLYTYTFEAER
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LTQGVVKRIIPAVASTNAVIAAVCATEVFKIATSAYIPLNNYLVFNDVDGLYTYTFEAER
           280       290       300       310       320       330   

              370       380       390       400       410       420
pF1KB8 KENCPACSQLPQNIQFSPSAKLQEVLDYLTNSASLQMKSPAITATLEGKNRTLYLQSVTS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KENCPACSQLPQNIQFSPSAKLQEVLDYLTNSASLQMKSPAITATLEGKNRTLYLQSVTS
           340       350       360       370       380       390   

              430       440       450       460   
pF1KB8 IEERTRPNLSKTLKELGLVDGQELAVADVTTPQTVLFKLHFTS
       :::::::::::::::::::::::::::::::::::::::::::
XP_011 IEERTRPNLSKTLKELGLVDGQELAVADVTTPQTVLFKLHFTS
           400       410       420       430      

>>NP_005490 (OMIM: 613295) SUMO-activating enzyme subuni  (640 aa)
 initn: 581 init1: 290 opt: 380  Z-score: 478.3  bits: 98.3 E(85289): 6.7e-20
Smith-Waterman score: 534; 41.9% identity (62.3% similar) in 236 aa overlap (71-302:19-239)

               50        60        70        80        90       100
pF1KB8 VKKFLERSGPFTHPDFEPSTESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVID
                                     .:::.::::.::::::::.:.:: .: .::
NP_005             MALSRGLPRELAEAVAGGRVLVVGAGGIGCELLKNLVLTGFSHIDLID
                           10        20        30        40        

              110       120       130       140         150        
pF1KB8 MDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFYKIQ--DFNDTFYRQ
       .::::::::::::::. : .:: ::.:: : . .  :. :.: .  .:.  :.:  :.::
NP_005 LDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQFYPKANIVAYHDSIMNPDYNVEFFRQ
       50        60        70        80        90       100        

      160       170       180       190       200       210        
pF1KB8 FHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSIVPLIDGGTEGFKGNARVILPGMT
       : ... .::.  ::  .: : ..     :        ::::..:: :. :.. .:  :.:
NP_005 FILVMNALDNRAARNHVNRMCLA----AD--------VPLIESGTAGYLGQVTTIKKGVT
      110       120       130                   140       150      

      220       230       240       250         260       270      
pF1KB8 ACIECTLELYPPQVNFPMCTIASMPRLPEHCIEYVRML--QWPKEQPFGEGVPLGGDDPE
        : ::  .  : : .:: ::: . :  : ::: ....:  :   :.   . :     :::
NP_005 ECYECHPK--PTQRTFPGCTIRNTPSEPIHCIVWAKYLFNQLFGEEDADQEVSPDRADPE
        160         170       180       190       200       210    

        280       290       300       310       320       330      
pF1KB8 HIQWIFQKSLERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVIAAVCATEVFKIATSAY
          :   ..  ::   :  :   :..                                  
NP_005 -AAWEPTEAEARARASNEDGDIKRISTKEWAKSTGYDPVKLFTKLFKDDIRYLLTMDKLW
           220       230       240       250       260       270   

>>XP_011532374 (OMIM: 191325) PREDICTED: ubiquitin-like   (796 aa)
 initn: 316 init1: 188 opt: 364  Z-score: 456.5  bits: 94.5 E(85289): 1.1e-18
Smith-Waterman score: 367; 33.9% identity (57.3% similar) in 218 aa overlap (73-279:220-418)

             50        60        70        80        90            
pF1KB8 KFLERSGPFTHPDFEPSTESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQ-----IH
                                     :..:::..:::::: .:: :.       . 
XP_011 EDCALRGSRYDGQIAVFGAGFQEKLRRQHYLLVGAGAIGCELLKVFALVGLGAGNSGGLT
     190       200       210       220       230       240         

       100       110       120       130       140       150       
pF1KB8 VIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFYKIQD-----FN
       :.::: :. :::.:::::: .:.:::::::::       :. .:.:  : ..      ..
XP_011 VVDMDHIERSNLSRQFLFRSQDVGRPKAEVAAAAARGLNPDLQVIPLTYPLDPTTEHIYG
     250       260       270       280       290       300         

            160       170       180       190       200       210  
pF1KB8 DTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSIVPLIDGGTEGFKGNARV
       :.:. .   .. .:::. :::.. .     :.            ::...:: :  :.: :
XP_011 DNFFSRVDGVAAALDSFQARRYVAARCTHYLK------------PLLEAGTSGTWGSATV
     310       320       330       340                   350       

            220       230        240       250       260       270 
pF1KB8 ILPGMTACIECTLELYPPQ-VNFPMCTIASMPRLPEHCIEYVRMLQWPKEQPFGEGVPLG
       ..: .:   .        . . .:.::.  .:   ::       ::: ... : :   :.
XP_011 FMPHVTEAYRAPASAAASEDAPYPVCTVRYFPSTAEHT------LQWARHE-FEELFRLS
       360       370       380       390             400        410

             280       290       300       310       320       330 
pF1KB8 GDDPEHIQWIFQKSLERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVIAAVCATEVFKI
       ..  .: :                                                    
XP_011 AETINHHQQAHTSLADMDEPQTLTLLKPVLGVLRVRPQNWQDCVAWALGHWKLCFHYGIK
              420       430       440       450       460       470

>>XP_005265487 (OMIM: 191325) PREDICTED: ubiquitin-like   (987 aa)
 initn: 249 init1: 188 opt: 364  Z-score: 455.1  bits: 94.6 E(85289): 1.3e-18
Smith-Waterman score: 367; 33.9% identity (57.3% similar) in 218 aa overlap (73-279:436-634)

             50        60        70        80        90            
pF1KB8 KFLERSGPFTHPDFEPSTESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQ-----IH
                                     :..:::..:::::: .:: :.       . 
XP_005 EDCALRGSRYDGQIAVFGAGFQEKLRRQHYLLVGAGAIGCELLKVFALVGLGAGNSGGLT
         410       420       430       440       450       460     

       100       110       120       130       140       150       
pF1KB8 VIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFYKIQD-----FN
       :.::: :. :::.:::::: .:.:::::::::       :. .:.:  : ..      ..
XP_005 VVDMDHIERSNLSRQFLFRSQDVGRPKAEVAAAAARGLNPDLQVIPLTYPLDPTTEHIYG
         470       480       490       500       510       520     

            160       170       180       190       200       210  
pF1KB8 DTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSIVPLIDGGTEGFKGNARV
       :.:. .   .. .:::. :::.. .     :.            ::...:: :  :.: :
XP_005 DNFFSRVDGVAAALDSFQARRYVAARCTHYLK------------PLLEAGTSGTWGSATV
         530       540       550                   560       570   

            220       230        240       250       260       270 
pF1KB8 ILPGMTACIECTLELYPPQ-VNFPMCTIASMPRLPEHCIEYVRMLQWPKEQPFGEGVPLG
       ..: .:   .        . . .:.::.  .:   ::       ::: ... : :   :.
XP_005 FMPHVTEAYRAPASAAASEDAPYPVCTVRYFPSTAEHT------LQWARHE-FEELFRLS
           580       590       600       610              620      

             280       290       300       310       320       330 
pF1KB8 GDDPEHIQWIFQKSLERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVIAAVCATEVFKI
       ..  .: :                                                    
XP_005 AETINHHQQAHTSLADMDEPQTLTLLKPVLGVLRVRPQNWQDCVAWALGHWKLCFHYGIK
        630       640       650       660       670       680      

>>NP_003326 (OMIM: 191325) ubiquitin-like modifier-activ  (1012 aa)
 initn: 249 init1: 188 opt: 364  Z-score: 454.9  bits: 94.6 E(85289): 1.3e-18
Smith-Waterman score: 367; 33.9% identity (57.3% similar) in 218 aa overlap (73-279:436-634)

             50        60        70        80        90            
pF1KB8 KFLERSGPFTHPDFEPSTESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQ-----IH
                                     :..:::..:::::: .:: :.       . 
NP_003 EDCALRGSRYDGQIAVFGAGFQEKLRRQHYLLVGAGAIGCELLKVFALVGLGAGNSGGLT
         410       420       430       440       450       460     

       100       110       120       130       140       150       
pF1KB8 VIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFYKIQD-----FN
       :.::: :. :::.:::::: .:.:::::::::       :. .:.:  : ..      ..
NP_003 VVDMDHIERSNLSRQFLFRSQDVGRPKAEVAAAAARGLNPDLQVIPLTYPLDPTTEHIYG
         470       480       490       500       510       520     

            160       170       180       190       200       210  
pF1KB8 DTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSIVPLIDGGTEGFKGNARV
       :.:. .   .. .:::. :::.. .     :.            ::...:: :  :.: :
NP_003 DNFFSRVDGVAAALDSFQARRYVAARCTHYLK------------PLLEAGTSGTWGSATV
         530       540       550                   560       570   

            220       230        240       250       260       270 
pF1KB8 ILPGMTACIECTLELYPPQ-VNFPMCTIASMPRLPEHCIEYVRMLQWPKEQPFGEGVPLG
       ..: .:   .        . . .:.::.  .:   ::       ::: ... : :   :.
NP_003 FMPHVTEAYRAPASAAASEDAPYPVCTVRYFPSTAEHT------LQWARHE-FEELFRLS
           580       590       600       610              620      

             280       290       300       310       320       330 
pF1KB8 GDDPEHIQWIFQKSLERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVIAAVCATEVFKI
       ..  .: :                                                    
NP_003 AETINHHQQAHTSLADMDEPQTLTLLKPVLGVLRVRPQNWQDCVAWALGHWKLCFHYGIK
        630       640       650       660       670       680      

>>XP_016863848 (OMIM: 611361) PREDICTED: ubiquitin-like   (1009 aa)
 initn: 460 init1: 139 opt: 306  Z-score: 381.1  bits: 80.9 E(85289): 1.7e-14
Smith-Waterman score: 372; 34.7% identity (61.8% similar) in 199 aa overlap (67-254:458-642)

         40        50        60        70        80        90      
pF1KB8 RWNHVKKFLERSGPFTHPDFEPSTESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFR--
                                     :.. .....: :..:::.:::.:: :    
XP_016 LGKPECEEFLPRGDRYDALRACIGDTLCQKLQNLNIFLVGCGAIGCEMLKNFALLGVGTS
       430       440       450       460       470       480       

              100       110       120       130       140       150
pF1KB8 ----QIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFYKIQD
           .: : : : :. :::::::::::. : .::. .::.       . ..  :. :.  
XP_016 KEKGMITVTDPDLIEKSNLNRQFLFRPHHIQKPKSYTAADATLKINSQIKIDAHLNKVCP
       490       500       510       520       530       540       

                   160       170       180       190       200     
pF1KB8 -----FNDTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSIVPLIDGGTEG
            .:: :: .  .:. .::.. :::....  .. :             ::.:.:: :
XP_016 TTETIYNDEFYTKQDVIITALDNVEARRYVDSRCLANLR------------PLLDSGTMG
       550       560       570       580                   590     

         210       220       230       240       250       260     
pF1KB8 FKGNARVILPGMTACIECTLELYPPQVNFPMCTIASMPRLPEHCIEYVRMLQWPKEQPFG
        ::...::.: .:   .   .  ::. ..:.::. :.:   :: :...:           
XP_016 TKGHTEVIVPHLTESYNSHRD--PPEEEIPFCTLKSFPAAIEHTIQWARDKFESSFSHKP
         600       610         620       630       640       650   

         270       280       290       300       310       320     
pF1KB8 EGVPLGGDDPEHIQWIFQKSLERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVIAAVCA
                                                                   
XP_016 SLFNKFWQTYSSAEEVLQKIQSGHSLEGCFQVIKLLSRRPRNWSQCVELARLKFEKYFNH
           660       670       680       690       700       710   

>>NP_060697 (OMIM: 611361) ubiquitin-like modifier-activ  (1052 aa)
 initn: 460 init1: 139 opt: 306  Z-score: 380.8  bits: 80.9 E(85289): 1.8e-14
Smith-Waterman score: 372; 34.7% identity (61.8% similar) in 199 aa overlap (67-254:458-642)

         40        50        60        70        80        90      
pF1KB8 RWNHVKKFLERSGPFTHPDFEPSTESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFR--
                                     :.. .....: :..:::.:::.:: :    
NP_060 LGKPECEEFLPRGDRYDALRACIGDTLCQKLQNLNIFLVGCGAIGCEMLKNFALLGVGTS
       430       440       450       460       470       480       

              100       110       120       130       140       150
pF1KB8 ----QIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFYKIQD
           .: : : : :. :::::::::::. : .::. .::.       . ..  :. :.  
NP_060 KEKGMITVTDPDLIEKSNLNRQFLFRPHHIQKPKSYTAADATLKINSQIKIDAHLNKVCP
       490       500       510       520       530       540       

                   160       170       180       190       200     
pF1KB8 -----FNDTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSIVPLIDGGTEG
            .:: :: .  .:. .::.. :::....  .. :             ::.:.:: :
NP_060 TTETIYNDEFYTKQDVIITALDNVEARRYVDSRCLANLR------------PLLDSGTMG
       550       560       570       580                   590     

         210       220       230       240       250       260     
pF1KB8 FKGNARVILPGMTACIECTLELYPPQVNFPMCTIASMPRLPEHCIEYVRMLQWPKEQPFG
        ::...::.: .:   .   .  ::. ..:.::. :.:   :: :...:           
NP_060 TKGHTEVIVPHLTESYNSHRD--PPEEEIPFCTLKSFPAAIEHTIQWARDKFESSFSHKP
         600       610         620       630       640       650   

         270       280       290       300       310       320     
pF1KB8 EGVPLGGDDPEHIQWIFQKSLERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVIAAVCA
                                                                   
NP_060 SLFNKFWQTYSSAEEVLQKIQSGHSLEGCFQVIKLLSRRPRNWSQCVELARLKFEKYFNH
           660       670       680       690       700       710   




463 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 14:23:04 2016 done: Fri Nov  4 14:23:06 2016
 Total Scan time:  8.820 Total Display time:  0.050

Function used was FASTA [36.3.4 Apr, 2011]
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