GENSCAN 1.0	Date run:  4-Nov-116	Time: 14:20:31

Sequence gi568815582f:58150015_58379774 : 229760 bp : 42.65% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   6212   6291   80  1  2   40   92    75 0.537   3.68
 1.02 Term +   6537   6690  154  0  1   65   38   136 0.426   2.71
 1.03 PlyA +   7581   7586    6                              -0.45

 2.19 PlyA -   7913   7908    6                               1.05
 2.18 Term -   8339   8159  181  1  1  147   42   177 0.772  15.10
 2.17 Intr -  12064  11948  117  0  0   97   60    63 0.324   3.06
 2.16 Intr -  14078  13973  106  0  1   44  -11   139 0.454  -2.05
 2.15 Intr -  15694  15546  149  0  2   91   65   224 0.949  19.36
 2.14 Intr -  16670  16570  101  2  2   73   98   154 0.999  12.89
 2.13 Intr -  17294  17193  102  2  0   88   99    82 0.995   8.75
 2.12 Intr -  17781  17671  111  0  0   75   97   134 0.998  12.66
 2.11 Intr -  18679  18596   84  1  0   91   76    44 0.849   2.60
 2.10 Intr -  20467  20351  117  1  0   -5   69   126 0.007   1.14
 2.09 Intr -  24496  24437   60  1  0   64  106    53 0.014   2.71
 2.08 Intr -  36842  36741  102  2  0   41   66   136 0.127   6.15
 2.07 Intr -  46830  46719  112  2  1   93  113   140 0.978  16.46
 2.06 Intr -  55923  55778  146  0  2   24  103    50 0.002  -1.74
 2.05 Intr -  65753  65628  126  2  0   27   60   117 0.139   2.76
 2.04 Intr -  72817  72646  172  0  1   84   87   102 0.347   8.72
 2.03 Intr -  76632  76434  199  1  1   36  -24   168 0.005  -2.11
 2.02 Intr -  86469  86260  210  1  0   81   61    98 0.449   4.36
 2.01 Init -  92078  91949  130  2  1   85   92    58 0.589   6.26
 2.00 Prom -  92936  92897   40                              -8.85

 3.05 PlyA -  93161  93156    6                               1.05
 3.04 Term -  93301  93212   90  1  0  101   45    77 0.835   1.44
 3.03 Intr -  93510  93439   72  0  0   99   81    56 0.817   4.68
 3.02 Intr -  99191  99079  113  0  2   53   91    51 0.930   1.08
 3.01 Init - 100183  99916  268  1  1   45  -15   346 0.696  17.21
 3.00 Prom - 100949 100910   40                              -7.05

 4.00 Prom + 102196 102235   40                              -5.85
 4.01 Init + 102747 102839   93  2  0   37   86   154 0.991  10.53
 4.02 Intr + 103984 104256  273  0  0   78   91   249 0.900  21.01
 4.03 Intr + 105063 105350  288  2  0   39    4   359 0.985  19.12
 4.04 Intr + 108354 108509  156  2  0   71  110   200 0.999  19.79
 4.05 Intr + 112371 112526  156  2  0   11   78   180 0.895   8.59
 4.06 Intr + 113491 113559   69  0  0   97   80    69 0.554   5.46
 4.07 Intr + 117465 117572  108  2  0   64   75    64 0.009   2.26
 4.08 Intr + 128468 128623  156  1  0   79   83   175 0.364  15.39
 4.09 Intr + 129677 129695   19  1  1  122   69    13 0.377  -1.93
 4.10 Intr + 131688 131809  122  1  2   48   57   123 0.567   4.49
 4.11 Term + 136049 136207  159  1  0   92   54   152 0.245   9.16
 4.12 PlyA + 137265 137270    6                               1.05

 5.04 PlyA - 139954 139949    6                               1.05
 5.03 Term - 140782 140510  273  1  0   18   48   173 0.832   0.79
 5.02 Intr - 141122 140905  218  0  2   90   60   243 0.891  19.00
 5.01 Init - 143766 143718   49  0  1   76   81   100 0.890   7.27
 5.00 Prom - 154069 154030   40                              -6.35

 6.00 Prom + 161726 161765   40                              -3.55
 6.01 Init + 163462 163672  211  0  1   69   42   139 0.371   6.40
 6.02 Intr + 174720 174742   23  1  2  100  100     0 0.004  -1.26
 6.03 Intr + 180465 180611  147  2  0   56  109    38 0.359   2.21
 6.04 Intr + 186615 186905  291  2  0   29   93   175 0.235   8.51
 6.05 Intr + 189681 189768   88  2  1   31   97   116 0.018   5.42
 6.06 Intr + 202527 202575   49  1  1   40   81    80 0.009  -0.68
 6.07 Term + 202821 203049  229  0  1   53   39   152 0.011   1.92
 6.08 PlyA + 203351 203356    6                               1.05

 7.03 PlyA - 204148 204143    6                               1.05
 7.02 Term - 210853 210616  238  0  1   67   47   196 0.883   8.06
 7.01 Init - 211845 211652  194  0  2   72   96    79 0.775   5.59
 7.00 Prom - 220138 220099   40                              -3.45


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  20455  20351  105  1  0   68   69   117 0.936   8.07
S.002 Init -  60328  60232   97  1  1   61   98   110 0.848   9.82
S.003 Init - 115979 115829  151  2  1   90   68   145 0.899  12.96


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815582f:58150015_58379774|GENSCAN_predicted_peptide_1|77_aa
MTSKDASQSNDSIRIRPSMSGEDLRWQWWPMGPHLLVSRGDAQSQAPTPEQQLRCHRSWS
KGHHDAVVALKGACFPP

>gi568815582f:58150015_58379774|GENSCAN_predicted_CDS_1|234_bp
atgacatctaaagatgcaagccaatcaaatgattctattcgaataagaccctctatgtct
ggagaagacctgagatggcagtggtggcctatgggtcctcacctgctggtgtccaggggg
gatgcacagtctcaagctcccacacctgagcaacagcttagatgccacagaagctggtcc
aaaggacaccacgatgctgtggtggccctgaaaggggcctgctttcctccatag

>gi568815582f:58150015_58379774|GENSCAN_predicted_peptide_2|774_aa
MARKDIQVLIIGTYEYYLVKGEKVLTILAIKLKVLKWSGYPGLFLAAHSLSLIIPRVWLT
LTHNASPARLCFYHPSPSPSHLELPGMLLVPGCHNHLRRFPYSQSHVNVNSPINSSLKMI
PENPHYPQGLLFTSISHGPDLQDLHADLTLVKHLYASVHQASVSVRTLSGANDRIPTPVK
LAARELCAKAWIEMSLVSIDLEGTPPLGLLKQGTPQATAPQAAPVKGGEEPSPPSWKVGT
EVLFQRREKRKKYPFIIPYPPVGGDDSRAGISAVKEQDLARLNKRGHPQEHQQKIPIPLA
LLPRTGSGTFPPSPSGAFSGWRTEWVTRNQDDYQLVRKLGRGKYSEVFEAINITNNERVV
VKILKPVKKKKIKREVKILENLRGGTNIIKLIDTVKDPVQLYQILTDFDIRFYMYELLKG
NESMSGNNPNVHQLVVEYYSARKNNLDESQKQYTEGKKALDYCHSKGIMHRDVKPHNVMI
DHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLAS
MIFRREPFFHGQDNYDQLVRIAKVLGTEELYGYLKKYHIDLDPHFNDILGQHSRKRWENF
IHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYFLVSRQHDEDWKATGNAALML
ANKTNQPNTNLEGKLHCLSGPGKRCLLEGLGEAVTPFLSLGSPKGNKSTWRRIVRSVAVL
PLFHKQNKNQIKRLNAYREITFREQTQNGGRFGEHELDQAKGSPPPYIKPHFRM

>gi568815582f:58150015_58379774|GENSCAN_predicted_CDS_2|2325_bp
atggcccgcaaagatatccaggttctaatcattggaacctatgaatattaccttgtaaag
ggggaaaaggtcttaacaattttagcgattaagttaaaggtcttaaaatggagtggttat
cctggattatttttggcggcgcacagcctctccttgatcatacctcgtgtctggctgacc
ctcacgcacaatgccagccctgctcgactctgcttttatcatccctccccttccccgtct
cacctagaattacctggaatgctgctggtccctgggtgccacaaccatcttcgcaggttc
ccttattcacagtcccatgtgaatgtaaacagtcccatcaattcatcgcttaaaatgatc
cctgagaacccccactatccccagggattgttgttcacaagtatctctcatggcccagac
ctgcaagacctccatgctgacctgacgttagtcaagcacctgtatgcgtctgtgcatcag
gcatctgtgtcagtcaggacactttctggtgcaaatgacagaattccaacgcctgtcaag
ctggctgcaagagaactctgtgcaaaggcctggattgaaatgtccctggtttctattgat
ctggaagggactcctcctctaggattgctgaaacagggcaccccgcaggcgacagctccg
caggcagctcctgtgaagggaggagaggagccatctccaccctcctggaaagtagggaca
gaagtcctattccagaggagagaaaaaagaaaaaagtacccgttcatcattccttatccc
ccagtgggtggggatgacagcagggcaggcatctctgctgtcaaggagcaggatttggca
agactgaataagaggggtcacccacaggagcaccagcagaaaattcccattcctctggct
ctcttgcccaggacaggctctggcacattcccaccatccccctcaggggcattctctggt
tggaggacagagtgggtcacacgtaatcaagatgattaccaactggttcgaaaacttggt
cggggaaaatatagtgaagtatttgaggccattaatatcaccaacaatgagagagtggtt
gtaaaaatcctgaagccagtgaagaaaaagaagataaaacgagaggttaagattctggag
aaccttcgtggtggaacaaatatcattaagctgattgacactgtaaaggaccccgtgcaa
ctctaccagatcctgacagactttgatatccggttttatatgtatgaactacttaaagga
aatgaaagcatgagtggaaacaacccaaatgtccatcagctagtagtggaatactactca
gcaaggaaaaacaacttggatgaatctcagaaacagtatactgaaggaaagaaggctctg
gattactgccacagcaagggaatcatgcacagggatgtgaaacctcacaatgtcatgata
gatcaccaacagaaaaagctgcgactgatagattggggtctggcagaattctatcatcct
gctcaggagtacaatgttcgtgtagcctcaaggtacttcaagggaccagagctcctcgtg
gactatcagatgtatgattatagcttggacatgtggagtttgggctgtatgttagcaagc
atgatctttcgaagggaaccattcttccatggacaggacaactatgaccagcttgttcgc
attgccaaggttctgggtacagaagaactgtatgggtatctgaagaagtatcacatagac
ctagatccacacttcaacgatatcctgggacaacattcacggaaacgctgggaaaacttt
atccatagtgagaacagacaccttgtcagccctgaggccctagatcttctggacaaactt
ctgcgatacgaccatcaacagagactgactgccaaagaggccatggagcacccatacttc
ttggtctcacggcagcacgatgaagactggaaagcgacgggtaatgcggcattgatgctt
gccaataaaaccaaccaaccaaacacaaaccttgaaggaaaactacattgcctgtctgga
ccaggcaagaggtgcctactggagggtcttggtgaagcggtaactccattcctttccctt
gggtcccccaaaggtaataaaagtacctggaggagaatagtcaggtctgttgcggttctc
ccacttttccataagcagaacaagaaccaaatcaaacgtcttaacgcgtatagagagatc
acgttccgtgagcagacacaaaacggtggcaggtttggcgagcacgaactagaccaagcg
aagggcagcccaccaccgtatatcaaacctcacttccgaatgtaa

>gi568815582f:58150015_58379774|GENSCAN_predicted_peptide_3|180_aa
MLVPKSEAARRGGPRRKRGGPQARAAVPELLHQPAQLDNRQLQLRPFMGVGEDALGLIIS
HHSAEAAPANAVCPGAPGAGGHASLRLRRDQKTKEWSSLGSIPLKNGIKLRWNPKSMLLT
STLMWDMSFSYPSKAIPTKVLEEFIEITFNQCLSLILLVFRSEEETEKIFEEIMAEFFHI

>gi568815582f:58150015_58379774|GENSCAN_predicted_CDS_3|543_bp
atgctggtccccaagtccgaggccgcccggagaggagggcctaggaggaagaggggcggc
ccccaggcgcgggcggcggtacctgagctcctccaccagcccgcacagctggataacagg
cagctccagctccgacccttcatgggagtcggagaggacgctctcggactcatcatcagt
catcactctgccgaagcggcccctgccaatgccgtgtgcccaggagctccgggtgccggc
ggccacgcgtcactccggctgcgacgcgatcagaaaaccaaggaatggagtagcttaggt
tccattccactcaagaatggaatcaagctccggtggaacccaaagtccatgctgttaact
tctacgctgatgtgggacatgtccttctcctatccatccaaagccattcccactaaggtg
ttggaagagttcattgagattacatttaaccagtgtctttccttgatcctgctcgtcttc
agaagtgaggaggagacagaaaaaatatttgaagaaataatggctgaatttttccacatt
tga

>gi568815582f:58150015_58379774|GENSCAN_predicted_peptide_4|532_aa
MFEKYYAKLEPRDQRPPRLSEIKISAADYAQFRGRRRSKSRTGMDRGVGLTADQKLELVQ
KEVADMKDDLRHTRANAERDLQHHEVHLPASAACPAQAPHLYPTERYLEWVHVIVGALEE
TQAVKREKPVVAQSKSESFKTREANGAAFGPWPKALEPPGSCWYKSEGLKAKNLESDVRG
QEEQKQLSGMGRRGRARRLSTQASSTCFALAALAANWMAIIEEAEIRWSEVSREVHEFEK
DILKAISKKKGSILATQKVMKYIEDMNRRRKEEVSEALHDVDFQQLKIENAQFLETIEAR
NQELTQLKLSSGNTLQVLNAYKKSFADPSHSAQVAMVAVGLGSSQSKLHKAMEIYLNLDK
EILLRKELLEKIEKETLQVEEDRAKAEAVNKRLRKQLAEFRAPQVMTYVREKILNADLEK
SIRMWERKVEIAEMSLKGHLWTETWNGAAINNRKQSEQTEPRAAERQKSSRFSPLPSETW
EGYVVAHGVVIKVLMDDDGIDWILCVSNLARIHVTYTHYNDNVLPGERARES

>gi568815582f:58150015_58379774|GENSCAN_predicted_CDS_4|1599_bp
atgtttgagaaatattacgctaaactggagcccagggatcagcgacctccacgattatca
gaaattaaaatatcagcagcagattatgcacagtttcgaggcaggcgtagatccaaatcc
cggacaggtatggaccgtggggtaggcctgactgccgaccaaaaacttgagctggtacaa
aaagaggttgcggacatgaaggatgacttacgacacacaagggcaaatgcggaacgcgac
ctgcagcatcacgaggtacaccttcctgccagcgcagcctgtcctgcccaggctccccac
ctctaccccactgagaggtatctagagtgggttcatgtgattgttggggctttggaagaa
acacaggctgtgaaaagagagaagccggtagtggctcagtccaagtctgaaagcttcaaa
accagggaagccaatggtgcagccttcggtccgtggccgaaggccctagagcccccagga
agctgctggtacaagtccgagggtctaaaggcaaagaacctggagtctgatgtccgaggg
caggaggagcagaagcaattgtcgggcatgggaagaagagggagagccagaagactcagt
acacaagcttcttccacctgctttgctctagctgctctggcagccaattggatggcgatc
attgaggaggctgaaattcgatggagtgaagtttcgagagaagtgcatgagtttgaaaaa
gatattctaaaagccatatccaagaagaaagggagtattttggccactcagaaagtgatg
aaatacattgaggacatgaaccgccggaggaaggaagaggtgagtgaggcccttcacgat
gttgattttcagcagttgaagatagagaacgctcaatttcttgagacaattgaagcaagg
aatcaagaactgacccagctaaagctgtcatctggaaacactctgcaggttctcaatgcc
tacaaaaaaagttttgccgacccctcgcatagtgctcaggtggcaatggtggctgtgggc
ttaggtagctcgcagagcaagcttcacaaggcaatggaaatatacctcaatctggacaag
gagatcttgctgagaaaagagctacttgaaaaaattgaaaaagaaacactacaagtagag
gaggaccgggccaaagccgaggcagtgaataagaggctccggaagcagctggccgagttc
cgggcaccacaggtgatgacttacgtccgggagaagatcttaaatgcggacctggagaag
agcatcaggatgtgggaaaggaaagtggagatagcagagatgtccttaaaaggccatctt
tggactgagacatggaatggggccgcaattaacaacaggaaacaatctgaacagactgaa
ccacgagcagcagaaaggcagaagagcagccgcttcagccccttaccatccgagacctgg
gagggctatgttgttgctcatggagttgttatcaaagtcctcatggatgatgatggtatt
gactggatactctgtgtgagcaatcttgctaggatccatgttacttatacccactataac
gacaatgtccttcctggagagagagcaagggaatcttga

>gi568815582f:58150015_58379774|GENSCAN_predicted_peptide_5|179_aa
MRGVLLVLLGLLYSSTSCGVQKASVFYGPDPKEGLVSSMEFPWVVSLQDSQYTHLAFGCI
LSEFWVLSIASAIQNRPVPLPLGPATSPGLPSLISAVRTAGLATEKCNDESSIQCRWDIL
SDFTAITEALAPNTRVPTTYQLFNQSIGALTLKHLGLTNVTATNTCTERKASEKIQKRF

>gi568815582f:58150015_58379774|GENSCAN_predicted_CDS_5|540_bp
atgcgaggggtgctcctggtgctgctcggccttctctattcttccaccagttgtggcgtc
cagaaagcttccgttttctacggtcctgaccccaaggagggcttggtcagcagcatggag
ttcccgtgggtggtgtcgctgcaggactcccagtacacacacctggctttcggctgcatc
ctgagcgagttctgggtcctcagcatcgcatccgccattcagaacaggccagtgcccctg
cctttggggcccgcaacatcgccggggttgccaagcctgatctctgctgtgaggactgca
ggccttgcaacggaaaaatgcaatgatgagtcctccattcaatgcaggtgggatattctt
tctgattttaccgccatcacggaggcactggctcctaacactagggtccctaccacttat
caactgttcaaccagtcaataggagcccttaccttaaaacatttgggccttacaaacgtt
actgccacaaatacatgtacagagagaaaagcctcggaaaaaatacagaagcgcttttaa

>gi568815582f:58150015_58379774|GENSCAN_predicted_peptide_6|345_aa
MGATIQDEIWVGTQPNHITALGEMFIGRAKWELVRLPEPTEYWVKAGVLVGTNPPLVALC
GVFTGAYGKSYEPIGNKPGKSVPISLQFRQHLLFLDFLIIAFLTTPDQLTQTLGVRPRHQ
YGFKAPQRYREFQDSCSRRGNIFFLNWVNVKLSFVSCGDHINVVTYASPKKVKYFRPPPS
SPVNQMPLVLPCDDHFCRQGAILLAAFYIDASSSCLNVALNKIKVVKATMDNFGIGKDRA
RMVQFPQFAEAGVGLGQSCFRGEEHRDYDRPGSATGDRGLFHPLSSTVKDGQSQSGHFRD
LPPGNALSFSGLFLAEKKNSVIFLLFAFERREIWLHSAWLSGSQT

>gi568815582f:58150015_58379774|GENSCAN_predicted_CDS_6|1038_bp
atgggggctacaattcaagatgagatttgggtggggacacagccaaaccatatcactgcc
cttggagaaatgttcattggacgtgctaaatgggaactagtaagattgcctgagcccaca
gaatattgggtaaaagctggagtactggttgggacaaatcctccactggtggctctttgt
ggagtgttcactggggcttatggcaaaagctatgagcccattggaaataagccaggtaaa
agcgttcctatttctctgcagtttcgccagcatctgttgtttcttgactttttaataatt
gcctttctgactacaccagaccaattgactcagacattgggtgtgagacccaggcatcag
tatggctttaaagccccccagaggtacagagaattccaggacagttgcagtagacgtggg
aacattttttttctcaactgggtgaatgtgaagctctcattcgtttcctgtggtgaccac
ataaacgttgtcacctatgcatcgcccaagaaagttaaatatttccgtcctcccccaagc
agcccagtcaaccaaatgccactggtgcttccgtgcgatgatcatttctgccggcagggg
gcaatcttgctcgccgcattctatattgacgcttcctccagctgtctgaacgtggcgctc
aacaaaattaaggtggtcaaggccacaatggataattttggtattggaaaggacagagct
cggatggtccagttccctcagtttgcagaagcgggggttggactagggcagagctgtttt
cgaggagaggagcaccgagattatgacaggcctgggagcgctaccggagaccggggctta
tttcatcccttatcttcaaccgtaaaagacggacagtcccagagtggccatttcagagac
ctaccccctgggaacgcattgtctttctcagggctgttccttgctgagaaaaagaattca
gtgatatttctcctatttgcttttgaaagaagagaaatatggctccattctgcgtggctc
tcaggaagccagacctaa

>gi568815582f:58150015_58379774|GENSCAN_predicted_peptide_7|143_aa
MGQYFCLRKAEEKIKGTLSCTLSTSSATLGWSTKQVLGVPDSRTWLLDDISGPLLGQREA
HCPEGHRHTSTTIKMIQENMTSPNELNKPPETNSGEREKCDLSDREINIVILRKLNEIKD
NTEKKLRILSDKFTKEIEIIKKN

>gi568815582f:58150015_58379774|GENSCAN_predicted_CDS_7|432_bp
atggggcaatacttctgcttgagaaaagcagaggaaaaaataaaggggactttgtcttgc
actttaagtaccagctcagccacactgggttggagcaccaagcaggttcttggagtccct
gattccaggacttggctcttggacgacatttctggacctttactgggccagagagaagcc
cactgccctgaaggacacagacacacatctacaactatcaagatgatccaggaaaacatg
acctcaccaaatgaactaaataagccaccagagaccaattctggagaaagagagaaatgt
gacctttctgacagagaaatcaacatagttattttgaggaaactcaacgaaattaaagat
aacactgagaagaaactcagaattctatcagataaatttaccaaagagattgaaataatt
aaaaagaattaa