GENSCAN 1.0	Date run:  4-Nov-116	Time: 12:48:04

Sequence gi568815597r:169753716_169988840 : 235125 bp : 37.59% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 Intr -   5254   4949  306  1  0   50   59   199 0.373   8.92
 1.02 Intr -  31945  31671  275  2  2   20   16   233 0.033   5.63
 1.01 Init -  33910  33775  136  1  1  100   86    42 0.735   5.55
 1.00 Prom -  36462  36423   40                              -7.75

 2.04 PlyA -  38834  38829    6                               1.05
 2.03 Term -  39952  38862 1091  2  2   50   32   577 0.450  39.56
 2.02 Intr -  41426  41189  238  2  1   54   66   139 0.227   4.56
 2.01 Init -  43636  43631    6  1  0   97  110     0 0.476   4.13
 2.00 Prom -  46502  46463   40                              -5.55

 3.00 Prom +  47977  48016   40                              -7.95
 3.01 Init +  48927  49010   84  2  0   66  108    38 0.326   4.47
 3.02 Intr +  49454  49594  141  1  0   84  113    27 0.932   4.43
 3.03 Intr +  50360  50525  166  1  1   68   95    97 0.860   7.01
 3.04 Term +  51562  51674  113  2  2    8   44   131 0.497  -1.56
 3.05 PlyA +  54100  54105    6                               1.05

 4.00 Prom +  63072  63111   40                              -7.55
 4.01 Init +  66430  66524   95  0  2   80  100    71 0.673   7.40
 4.02 Intr +  73336  73462  127  1  1  100   37    86 0.353   4.46
 4.03 Intr +  75624  75734  111  2  0  112  107     2 0.409   4.16
 4.04 Intr +  83284  83397  114  0  0   85   99    66 0.686   7.12
 4.05 Intr +  88702  88824  123  0  0  115  110    20 0.813   6.76
 4.06 Intr +  89959  90054   96  0  0   96  110    23 0.958   4.59
 4.07 Intr +  93975  94088  114  2  0   81   90    52 0.944   4.42
 4.08 Intr +  98102  98221  120  1  0   50   80   136 0.878   8.77
 4.09 Term +  99075  99272  198  2  0   82   47    60 0.799  -2.28
 4.10 PlyA +  99527  99532    6                               1.05

 5.17 PlyA -  99596  99591    6                              -0.45
 5.16 Term - 101249 100534  716  0  2   87   37   605 0.794  47.96
 5.15 Intr - 105497 105326  172  2  1   90  116    64 0.998   7.99
 5.14 Intr - 109082 108898  185  0  2   55   71   234 0.668  16.99
 5.13 Intr - 110793 110654  140  2  2   98   63    66 0.877   4.29
 5.12 Intr - 113258 113181   78  1  0   73   97    47 0.687   1.85
 5.11 Intr - 116642 116419  224  2  2   66   93    41 0.695  -1.60
 5.10 Intr - 122376 122263  114  0  0  119   99    73 0.960  11.22
 5.09 Intr - 125104 124919  186  1  0   65   89   125 0.886   9.26
 5.08 Intr - 128863 128679  185  2  2   41   27   106 0.535  -1.61
 5.07 Intr - 129367 129164  204  2  0   43   40   175 0.634   6.45
 5.06 Intr - 129652 129468  185  0  2   53  101    99 0.083   6.21
 5.05 Intr - 140286 140073  214  1  1   54   92    79 0.042   1.75
 5.04 Intr - 143332 143241   92  0  2   54   60    79 0.103   0.42
 5.03 Intr - 144727 144595  133  2  1   44   74   100 0.082   2.98
 5.02 Intr - 154076 154002   75  0  0   78   70    75 0.045   3.27
 5.01 Init - 161573 161477   97  2  1   99  103    67 0.851   7.98
 5.00 Prom - 163533 163494   40                              -7.45

 6.10 PlyA - 163658 163653    6                               1.05
 6.09 Term - 168066 167961  106  2  1  101   44   161 0.859   9.90
 6.08 Intr - 200395 200296  100  2  1  119   97    75 0.661   9.75
 6.07 Intr - 207520 207331  190  1  1   84   59   210 0.742  15.94
 6.06 Intr - 218883 218798   86  1  2   30  115    51 0.122   0.62
 6.05 Intr - 224468 224370   99  0  0   78   20    90 0.150   0.36
 6.04 Intr - 228382 228257  126  2  0   55   54    86 0.258   1.63
 6.03 Intr - 229152 228987  166  0  1   54   72   197 0.973  13.31
 6.02 Intr - 229667 229555  113  0  2   74   87    65 0.948   4.18
 6.01 Intr - 230975 230867  109  2  1   70   86    70 0.493   3.94

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:169753716_169988840|GENSCAN_predicted_peptide_1|239_aa
MAMGFCSSGEKIVLTAEYGQVGIYSRGARWVKESVDEKILRGSIKGSRERQADERQNSMA
EKERRGASERREAGDDWRGDRLLDSQTPGEYHLPTPSPFQLPIHPTESHLHHSIKLPHSS
FKSMCNLILPGCQTRTWMSRLKGVNVQLRPLLQRVQALTKHWWLTCGIEPVGAQESRIEV
WEPPRLRFPRMYGNAWMSRQKFAAGVEPSWRTSTRAVQKGNVGSEPPHRVPTGALPGGA

>gi568815597r:169753716_169988840|GENSCAN_predicted_CDS_1|717_bp
atggcaatgggattttgcagtagtggggagaaaatagtcttaactgcagagtatgggcaa
gtgggaatttatagccgaggagcaaggtgggtcaaggagtcagtggatgaaaaaatacta
agaggaagcatcaagggctccagagagagacaggcagatgaacggcagaacagcatggca
gagaaggagagaagaggagcatctgaacgtcgagaggctggggacgactggagaggagat
cggctgctggacagccaaactccaggagaatatcatcttcccactccatcccccttccag
ctccccatccatcccactgagagccacctccaccactccataaaactcccacattcatcc
ttcaagtccatgtgtaacctgattcttcctggatgccagacaaggacctggatgtctagg
ctaaaaggtgtcaacgtacagctcaggccattgcttcagagggttcaagccctgaccaag
cattggtggcttacatgtggtattgagcctgtgggtgcacaggagtcaagaattgaagtt
tgggaacctccgcggcttagatttccgaggatgtatggaaatgcctggatgtccaggcag
aagtttgctgcaggggtagaaccctcatggagaacctctactagggccgtgcagaaggga
aatgtggggtcagagcccccacacagagtccccactggggcactgcctggtggtgct

>gi568815597r:169753716_169988840|GENSCAN_predicted_peptide_2|444_aa
MQGNRASWDRTFLRHTFVKQESFKPDPPKPRPETRSPANPCALSAGSKTIERRAAGFLVS
PGPSRPERKSGFSSPWRTRLTEDHLENELTPIRDGALTLDSSKELSVSESQKGEERDRKC
SAEQFDLPQDHLWEHKSMENAAPSQDTDSPLSAASSSRNLEPHGKQPSLRAAKEHAMPKD
LKKMLENKVIETLPGFQHVKLSVVKTILLKENFPGENIVSKSFSSHSDLITGVYEGGLKI
WECTFDLLAYFTKAKVKFAGKKVLDLGCGSGLLGITAFKGGSKEIHFQDYNSMVIDEVTL
PNVVANSTLEDEENDVNEPDVKRCRKPKVTQLYKCRFFSGEWSEFCKLVLSSEKLFVKYD
LILTSETIYNPDYYSNLHQTFLRLLSKNGRVLLASKAHYFGVGGGVHLFQKFVEERDVFK
TRILKIIDEGLKRFIIEITFKFPG

>gi568815597r:169753716_169988840|GENSCAN_predicted_CDS_2|1335_bp
atgcaggggaaccgcgctagctgggaccgcaccttcctgagacatactttcgtcaaacag
gagagcttcaaaccagacccgccaaagcccagaccggaaactcgcagtcccgccaaccct
tgcgcgctctccgccggctccaaaaccatagagaggagggcggctggtttcttggtgagc
ccgggtccctcaaggccggaaagaaagtcgggcttctctagcccctggaggactcgactc
actgaagaccatctggaaaatgaattaacacccattagagatggagctttgaccctggat
tcctcaaaagagctgtcagtctcagaaagtcaaaaaggagaagagagggacagaaaatgt
tctgcagaacaatttgacttgcctcaggatcacttgtgggaacataagtcaatggaaaat
gcagctccctctcaagacacagacagtccactcagtgcagccagcagttcaaggaacttg
gagccacatggaaaacagccctccttgagagctgccaaagagcatgctatgcctaaagat
ttaaagaagatgttagaaaataaagtcatagaaacattaccaggtttccagcatgttaag
ttatcagtagtgaaaaccatcttgttgaaagagaacttccctggagaaaacatagtttca
aaaagcttttcttctcactctgatctgattacaggtgtttatgagggaggcttaaaaatc
tgggaatgtacctttgacctcctggcttatttcacaaaggccaaagtgaaatttgctggg
aaaaaagtcttggatcttggttgtggatcaggtttactaggtataactgcattcaaggga
gggtccaaagaaattcactttcaagattataacagtatggtgattgatgaagtaacctta
cctaatgtagtagctaactccactttggaagatgaagaaaatgatgtaaatgagccagat
gtgaaaagatgcaggaaaccaaaagtaacacaactatataaatgccgatttttttctggt
gagtggtctgagttttgtaagcttgtactaagtagtgaaaaactttttgtaaaatatgat
ctcattctcacctcagaaaccatttacaacccagattattatagtaatttgcaccagact
ttccttagactgttaagtaaaaatggacgtgtacttttggccagcaaagcacattatttt
ggtgtaggtggaggtgttcatctctttcagaagtttgtagaagaaagagatgtttttaag
accagaatactcaaaataattgatgaaggattgaagaggttcataattgaaataactttt
aagtttcctggttaa

>gi568815597r:169753716_169988840|GENSCAN_predicted_peptide_3|167_aa
MMYELTSQARGLSSQNLEIQTTLRNILQTMVQLLGALTGCVQHICATQESIILENIQSLP
SSVLHIIKSTFVHCKNSESVYSGCLHLVSDLLQALFKEAYSLQKQLMELLDMVCMDPLVD
DNDDILNMVIAHPCDFSDFIHIWLLAEAEVLEKAMCIIQQVHPISDT

>gi568815597r:169753716_169988840|GENSCAN_predicted_CDS_3|504_bp
atgatgtatgaattaaccagtcaagccagaggactgtcaagccaaaatttggaaatccag
accactctaaggaatattttacaaacaatggtgcagctcttaggagctctcacaggatgt
gttcagcatatctgtgccacacaggaatccatcattttggaaaatattcagagtctcccc
tcctcagtccttcatataattaaaagcacatttgtgcattgtaagaatagtgaatctgtg
tattctgggtgtttacacctagtttcagaccttctccaggctcttttcaaggaggcctat
tctcttcaaaagcagttaatggaactgctggacatggtttgcatggaccctttagtagat
gacaatgatgatattttgaatatggtaatagctcacccatgtgacttcagtgacttcatt
cacatctggctgttggcagaggcagaagtacttgagaaagccatgtgcatcatccagcag
gttcaccctatctcagatacctga

>gi568815597r:169753716_169988840|GENSCAN_predicted_peptide_4|365_aa
MKEWTVDLSNRKDKKGKGENGRKALPVAGWGSKFPPSLYATRISKAHQEEIAGAFLVTLD
PLISQLLTFQPFMQGLKSKGKAEVAVTLYQHVCVHLCTFITSFHPSLFAELALPPELREQ
TVHEVTTVGTAECRKWLSRSRTLGELESLNTVLSALLAVCNSAGEALDTGKQTAIIEVVS
QLWAFLNIKQVADQPYVQQTFSLLLPLLGFFIQTLDPKLILQAVTLQTSLLKLELPDYVR
LAMLDFVSSLGKLFIPEAIQTGFVDETEAAKVERVKQEKGIFWEPFANVTVEEAKRSSLQ
PYAKRARQEFPWEEEYRSALHTIAGALEATESLLQKGPAPAWLSMEMEALQERMDKLKRY
IHTLG

>gi568815597r:169753716_169988840|GENSCAN_predicted_CDS_4|1098_bp
atgaaagagtggacagttgatctgagtaacagaaaagataagaaagggaaaggagagaat
gggagaaaagcattgcctgtggcagggtggggaagcaagtttcctccaagcctttatgct
accaggatttctaaagcacaccaagaggaaatagcaggtgctttcctagtgacactggat
ccacttatcagtcagctgctcacatttcagcctttcatgcagggattaaagagtaagggg
aaagctgaggtggctgtcaccttgtatcagcatgtttgtgttcatctgtgtacatttatt
acttcctttcatccctcactgtttgctgaactggcgttacctcctgagcttagggaacaa
actgtccatgaggtcaccacagtaggcactgcagaatgcaggaaatggctgagcaggagt
cgtactttgggagaactagaatctctgaacacagtactgtctgctttgcttgcagtatgt
aattctgctggtgaagctttggatacaggaaaacaaactgcaattatcgaagttgtgagt
cagctttgggcttttttaaacattaaacaggtagcagatcaaccttatgttcaacagaca
ttcagccttttacttccactgttgggatttttcattcaaactctagatcctaaactgata
cttcaggcagtaactttgcagacctcgctacttaaattagagcttcctgactatgttcgt
ttggcaatgttggattttgtatcttctttaggaaaactttttatacctgaagctatccag
actgggtttgtagatgaaactgaagctgccaaagtggaacgtgtgaaacaggaaaaaggt
attttctgggaaccctttgctaatgtgactgtagaagaagcaaagaggtcatctttacag
ccttatgcaaaaagagctcgtcaggagttcccctgggaagaagagtacaggtcagcgctg
catacaatagcaggggctttggaagcaactgagtcactactccaaaagggtcctgctcca
gcctggctttcaatggaaatggaggcgctccaagaaaggatggataagctaaaacgttac
atacatactctagggtga

>gi568815597r:169753716_169988840|GENSCAN_predicted_peptide_5|999_aa
MAPGGCGDSASFCILGLETTLTRSAEKKFTLPGSPLISVDTAILQNSGGPVSAMPPSYIF
KMRTEESVREYKISMHKKGRRSSESSSRELRTGTRAIEGSVGTCDHPSGKVGSESDLFDF
LTSLSKVNKGEGVGLIGGVGGRKVGLLSRFRTRLYGVGETRPPEDCGCSGHSLTGRQGWL
VSTGGPTGYQSQDPRPPPPPPSCRLQTGTGSWPLGTGWHSRRLWAVGTRALPSEFCLLSD
QQQYCVRNWWVLGLTDFKNEAADPRGVKPWTFAVSVTAHKGSVDPKSEQQQDLLQRAKGQ
SFHNVEADLRGLPLLAGQPAFILLSGPTHILLTDSGAQLASPSGSRTGAAGGAACQSHAM
CPHSSALWVVDGTGLRGAGGGAGQGGWGRTGAQGGHLKTLRHPCLLRFLSCTVEADGIHL
VTERVQPLEVALETLSSAEVCAGIYDILLALIFLHDRGHLTHNNVCLSSVFVSEDGHWKL
GGMETVCKVSQATPESPEFTTLPECHGHARDAFSFGTLVESLLTILNEQGELELYYCIYR
ISRKIIHDVFCVEFKGLQSLSTVRNLLLTRNDFLEVVNFLKSLTLKSEEEKTEFFKFLLD
RVSCLSEELIASRLVPLLLNQLVFAEPVAVKSFLPYLLGPKKDHAQGETPCLLSPALFQS
RVIPVLLQLFEVHEEHVRMVLLSHIEAYVEHFTQEQLKKVILPQVLLGLRDTSDSIVAIT
LHSLAVLVSLLGPEVVVGGERTKIFKRTAPSFTKNTDLSLEGDPFSQPIKFPINGLSDVK
NTSEDSENFPSSSKKSEEWPDWSEPEEPENQTVNIQIWPREPCDDVKSQCTTLDVEESSW
DDCEPSSLDTKVNPGGGITATKPVTSGEQKPIPALLSLTEESMPWKSSLPQKISLVQRGD
DADQIEPPKVSSQERPLKVPSELGLGEEFTIQVKKKPVKDPEMDWFADMIPEIKPSAAFL
ILPELRTEMVPKKDDVSPVMQFSSKFAAAEITEVSTFME

>gi568815597r:169753716_169988840|GENSCAN_predicted_CDS_5|3000_bp
atggcccctgggggatgcggggactcggcctccttctgcatcttaggattggaaaccaca
ctcacccgttcagctgagaaaaagtttactttgccaggttcccctttgatctcagttgac
acagccatccttcagaatagtggaggcccagtgtctgccatgccgccttcttacatattt
aaaatgaggactgaggaatcagtgagggaatacaagatttctatgcataagaaaggcaga
aggagctcagagagcagctccagggaactgagaactggaaccagagctatagagggctct
gtgggaacttgtgaccaccctagcgggaaagtaggctcagaaagtgatctttttgatttc
ttaacttctttatcgaaggtgaacaagggagaaggggttggcctcattggtggcgtcgga
gggaggaaggtgggccttctgtcccgtttccggacccgtctctatggtgtaggagaaacc
cggcccccagaagattgtgggtgtagtggccacagccttacaggcaggcaggggtggttg
gtgtcaacaggggggccaacagggtaccagagccaagaccctcggcctcctcccccgccg
ccttcctgcaggctgcagactggtactggttcgtggcctctaggaacaggatggcacagc
aggaggctgtgggcagtgggcacgcgagcattaccatctgagttctgtctcctgtcagat
cagcagcagtattgtgtccggaattggtgggttcttggtctcactgacttcaagaatgaa
gccgcggaccctcgcggagtgaagccgtggaccttcgcggtgagtgttacagctcataaa
ggcagtgtggacccaaagagtgagcagcaacaagatttattgcaaagagcgaaaggacaa
agcttccacaatgtggaagcggacctgagagggttgccactgctggctgggcagcctgct
tttattctcttatccggcccgacccacatcctgctgactgactcaggagcccagctggct
tcacccagtggatcccgcactggggctgcaggtggagctgcctgccagtcccacgccatg
tgcccgcactcctcagccctttgggtggtcgatgggactgggctccgtggagcagggggc
ggcgctggtcagggaggctggggtcgcacaggagcccagggagggcatttgaagacactt
cgtcacccttgcttgctaagatttttatcttgtactgtggaagcggatggcattcatctt
gtcactgagcgagtacagcccctggaagtggctttggaaacattgtcttctgcagaggtc
tgtgctgggatctatgacatattgctggctcttatcttccttcatgacagaggacaccta
acacacaataatgtctgtttatcatctgtgtttgtgagtgaagatggacactggaagcta
ggaggaatggaaactgtttgtaaagtttctcaggccacaccagagtctccagaattcaca
actctcccagagtgtcatggacatgcccgggatgccttttcatttggaacattggtggaa
agtttgctcacaatcttaaatgaacagggtgagttggagttatactactgcatctataga
ataagtaggaaaatcatccatgacgtattctgtgtggaattcaaaggactacagtctttg
agcacagtaaggaatcttttgcttaccagaaatgattttctggaagttgtgaatttcttg
aaaagtttaacattgaagagtgaagaggagaaaacggaattctttaaatttctgctggac
agagtcagctgcttgtcagaggaattgatagcttcaaggttggtgcctcttctgcttaat
cagttggtgtttgcagagccagtggctgttaagagttttcttccttatctgcttggcccc
aaaaaagatcatgcgcagggagaaactccttgcttgctctcaccagccctgttccagtca
cgggtgatccccgtgcttctccagttgtttgaagttcatgaagagcatgtgcggatggtg
ctgctgtctcacatcgaggcctacgtggagcacttcactcaggagcagctgaagaaagtc
atcttgccacaggttttgctgggcctgcgtgatactagcgattccattgtggcaattact
ctgcatagcctagcagtgctggtctctctgcttggaccagaggtggttgtgggaggagaa
cgaaccaagatcttcaaacgcactgccccaagttttactaaaaatactgacctttctcta
gaaggcgatccattttctcagcctattaaatttcccataaatggactctcagatgtaaaa
aatacttcggaggacagtgaaaacttcccatcaagttctaaaaagtctgaggagtggcct
gactggagtgaacctgaggagcctgaaaatcaaactgtcaacatacagatttggcctaga
gaaccttgtgatgatgtcaagtcccagtgcactaccttggatgtggaagagtcatcttgg
gatgactgcgagcccagcagcttagatactaaagtaaacccaggaggtggaatcactgct
acaaaacctgttacctcaggggagcagaagcctattcctgctttgctttcactcactgaa
gagtctatgccttggaaatcaagcttaccccaaaagattagccttgtacaaaggggggat
gacgcagaccaaatcgagccgccaaaagtgtcatcacaagaaaggccccttaaggttcca
tcagaacttggtttaggagaggaattcaccattcaagtaaaaaagaagccagtaaaagat
cctgagatggattggtttgctgatatgatcccagaaattaagccttctgctgcttttctt
atattacctgaactgaggacagaaatggtcccaaaaaaggatgatgtctccccagtgatg
cagttttcctcaaaatttgctgcagcagaaattactgaggtgagtacttttatggagtaa

>gi568815597r:169753716_169988840|GENSCAN_predicted_peptide_6|364_aa
LMKMLFECSDERIDLELISFCINLAANKRNVQLICEGNGLKMLMKRALKFKDPLLMKMIR
NISQHDGPTKNLFIDYVGDLAAQISNDEEEEFVIECLGTLANLTIPDLDWELVLKEYKLV
PYLKDKLKPGAAEDDLVLEVVIMIGTVSMDDSCAALLAKSGIIPALIELLNAQQEDDEFV
CQIIYVFYQMVFHQATRDVIIKETQAPAYLIDLMHDKNNEIRKVCDNTLDIIAEYDEEWA
KKIQSEKFRWHNSQWLEMVESRQMDESEQYLYGDDRIEPYIHEGDILERPDLFYNSDGLI
ASEGAISPDFFNDYHLQNGDVVGQHSFPGSLGMDGFGQPVGILGRPATAYGFRPDEPYYY
GYGS

>gi568815597r:169753716_169988840|GENSCAN_predicted_CDS_6|1095_bp
ttaatgaagatgctgtttgaatgttcagatgaacgaattgacttggaactcatttctttc
tgcattaatcttgctgctaacaaaagaaatgtacagcttatctgtgaaggaaatgggctg
aagatgctcatgaagagggctctgaagtttaaggatccattgctgatgaaaatgattaga
aacatttctcagcatgatggaccaactaaaaatctgtttattgattatgttggggacctt
gcagcccagatctctaatgatgaagaagaggagtttgtgattgaatgtttgggaactctt
gcaaacttgaccattccagacttagactgggaattggttcttaaagaatataagttggtt
ccatacctcaaggataaactaaaaccaggtgctgcagaagatgatcttgttttagaagtg
gttataatgattggaactgtatccatggatgactcttgtgctgcattgctagccaaatct
ggcataatccctgcactcattgaattgctaaatgctcaacaagaagatgatgaatttgtg
tgtcagataatttatgtcttctaccagatggttttccaccaagccacaagagacgtcata
atcaaggaaacacaggctccagcatatctcatagacctaatgcatgataagaataatgaa
atccgaaaggtctgtgataatacattagatattatagcggaatatgatgaagaatgggct
aagaaaattcagagtgaaaagtttcgctggcataactctcagtggctggagatggtagag
agtcgtcagatggatgagagtgagcagtacttgtatggtgatgatcgaattgagccatac
attcatgaaggagatattctcgaaagacctgaccttttctacaactcagatggattaatt
gcctctgaaggagccataagtcccgatttcttcaatgattaccaccttcaaaatggagat
gttgttgggcagcattcatttcctggcagccttggaatggatggctttggccaaccagtt
ggcattcttggacgccctgccacagcatatggattccgccctgatgaaccttactactat
ggctatggatcttga