GENSCAN 1.0	Date run:  4-Nov-116	Time: 12:21:08

Sequence gi568815575f:23683352_23885853 : 202502 bp : 44.62% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.11 PlyA -   1479   1474    6                               1.05
 1.10 Term -   8485   8345  141  1  0   76   54    34 0.335  -3.27
 1.09 Intr -   8930   8682  249  2  0   33  119    91 0.052   4.33
 1.08 Intr -  14172  14135   38  1  2   79   79    17 0.036  -2.12
 1.07 Intr -  21493  21343  151  1  1   60  107    79 0.783   6.74
 1.06 Intr -  21729  21642   88  2  1   86   96    26 0.763   3.17
 1.05 Intr -  23388  23277  112  1  1   96   78    77 0.918   6.94
 1.04 Intr -  39402  39319   84  1  0   87  111    59 0.842   7.89
 1.03 Intr -  47213  47176   38  1  2  101   69    23 0.823  -0.39
 1.02 Intr -  47635  47465  171  0  0   99   87    68 0.590   6.86
 1.01 Init -  52561  52503   59  1  2   95   71    42 0.630   3.98
 1.00 Prom -  69875  69836   40                              -5.86

 2.00 Prom +  74749  74788   40                              -5.06
 2.01 Init +  82134  82254  121  2  1   53   55    50 0.786  -1.45
 2.02 Intr +  82584  82713  130  1  1   65   84    67 0.903   3.75
 2.03 Intr +  83129  83291  163  2  1   82  100    83 0.844   8.88
 2.04 Intr +  99962 100066  105  1  0   30   69    93 0.042   2.01
 2.05 Intr + 100307 100358   52  1  1  102   86    14 0.946   1.08
 2.06 Intr + 100449 100532   84  1  0  108   86    60 0.965   7.59
 2.07 Intr + 101977 102078  102  2  0   74   80   115 0.966   9.45
 2.08 Intr + 102169 102209   41  2  2  121   91    15 0.999   3.04
 2.09 Term + 102335 102505  171  1  0   94   55   125 0.988   7.63
 2.10 PlyA + 102545 102550    6                               1.05

 3.00 Prom + 112502 112541   40                              -1.86
 3.01 Init + 131718 131816   99  2  0   85   82    93 0.706   8.66
 3.02 Term + 134033 134059   27  1  0  102   43     4 0.315  -4.63
 3.03 PlyA + 134087 134092    6                               1.05

 4.02 PlyA - 134977 134972    6                               1.05
 4.01 Sngl - 153969 153391  579  0  0   75   44   523 0.999  42.78
 4.00 Prom - 156455 156416   40                              -4.26

 5.00 Prom + 161855 161894   40                              -5.26
 5.01 Init + 163734 163803   70  2  1   66   45    64 0.582   1.11
 5.02 Term + 165913 166097  185  2  2   62   39   137 0.960   3.91
 5.03 PlyA + 166787 166792    6                               1.05

 6.07 PlyA - 168389 168384    6                               1.05
 6.06 Term - 174253 174126  128  2  2   67   42    96 0.037   1.34
 6.05 Intr - 185337 185242   96  1  0   53   92    45 0.036   1.38
 6.04 Intr - 191106 191052   55  0  1   94   97   -20 0.031  -1.95
 6.03 Intr - 195683 195564  120  2  0   56   87    30 0.171   0.39
 6.02 Intr - 197601 197494  108  0  0   56   77   101 0.676   6.28
 6.01 Intr - 201486 201439   48  0  0  121   38    35 0.283   0.68

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 100001 100066   66  1  0   81   69    76 0.885   6.12


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815575f:23683352_23885853|GENSCAN_predicted_peptide_1|376_aa
MVSLFDAYVVKNLVLLLFERDHVKAMEERKLLHSFLAKSQDGLPPRRMKDSYIEVLLPLG
SEPELREKYLTVQNTVRFGRILEDLDSLGVLICYMHNKIHSAKMSPLSIVTALVDKIVNK
GRRIAFSSTSLLKMAPSAEERTTIHEMFLSTLDPNGSRPFVVAVDDIMFQKPVEVGSLLF
LSSQVCFTQNNYIQVRVHSEVASLQEKQHTTTNVFHFTFMSEKEVPLVFPKTYGAIFLEG
SVVSLKVSCLSNEVSIKGPRGPGTQNFWTAELVKACRKVNKNSPMCWDDGAPQLHGNRSS
RAQDPSRPRPMCLFIWVFIRILQNILHKKLVDSIRIELDQKIPGWCPLQNCLPVGGENPY
TLHIWSQKSSVLIVVM

>gi568815575f:23683352_23885853|GENSCAN_predicted_CDS_1|1131_bp
atggtgtctctgtttgatgcctatgtggtgaaaaaccttgttttacttttatttgaaaga
gaccatgtgaaggcaatggaagaaaggaaattacttcatagtttcttggctaaatcacag
gatggactgcctcctaggagaatgaaggacagttatattgaagttctcttgcctttgggc
agtgagcctgaattacgagagaaatatttgactgttcaaaacaccgtaagatttggcagg
attcttgaggatcttgacagcttgggagttcttatttgttacatgcacaacaaaatccac
tccgccaagatgtctcctttatcgatagttacagccctggtggataagattgtgaacaag
gggagaagaattgccttcagctccacgtcgttactgaaaatggcccccagcgctgaggag
aggaccaccatacatgagatgtttctcagcacactggatccaaatggttctcgaccgttt
gtggtagcagtagatgacatcatgtttcagaaacctgttgaggttggctcattgctcttt
ctttcttcacaggtatgctttactcagaataattatattcaagtcagagtacacagtgaa
gtggcctccctgcaggagaagcagcatacaaccaccaatgtctttcatttcacgttcatg
tcggaaaaagaagtgccattggttttcccaaaaacatatggagccattttcttggaggga
tcagtggtgtcactgaaggtgtcatgcctatccaatgaagtctccataaaaggcccaaga
ggaccaggtacgcagaacttctggacagctgagctggtgaaggcttgcaggaaggtgaac
aagaattcacccatgtgttgggatgatggtgcaccccaactccacgggaatagaagctcc
cgtgctcaggacccttccagacctcgccctatgtgcctcttcatctgggtgtttattcgt
atccttcaaaatatccttcataagaaactggtggacagcatcagaattgaattggatcag
aagattcctggctggtgtccactgcagaattgcttgcctgttggtggggaaaatccctac
accctacacatttggtcacagaagtcttctgtattgattgttgtcatgtga

>gi568815575f:23683352_23885853|GENSCAN_predicted_peptide_2|322_aa
MATPQVEQPVDHFQSIGTALTSERNDGIAVPQLYQLDSPTTRKLCDQWCLCLSFDQARQT
CSTDVAWQAVLSSCYQPGFHACRGPAIQWVLSSRPTSRKNEVRGQLEGEQGGEEPYRVTE
QLSGNLKWVAPFRRQVVPGPGPQREEKQKTKMAKFVIRPATAADCSDILRLIKELAKYEY
MEEQVILTEKDLLEDGFGEHPFYHCLVAEVPKEHWTPEGHSIVGFAMYYFTYDPWIGKLL
YLEDFFVMSDYRGFGIGSEILKNLSQVAMRCRCSSMHFLVAEWNEPSINFYKRRGASDLS
SEEGWRLFKIDKEYLLKMATEE

>gi568815575f:23683352_23885853|GENSCAN_predicted_CDS_2|969_bp
atggctactccacaggtagagcagccagtagaccattttcaaagcattgggacagctctc
acctcagaaagaaatgatggtattgcggtgcctcagctctaccaactagattcaccaacc
actagaaagctctgtgaccagtggtgcctttgcctgagttttgatcaggcccgccagact
tgttccactgacgtggcctggcaggctgtgctcagctcatgctaccagccaggattccac
gcctgccgaggtcccgccattcagtgggtcctgagttctcgtcccacatccaggaagaat
gaggtacgcggacaactagagggtgagcaaggcggagaggagccttatcgagtgacagaa
cagctctcgggaaacttgaagtgggtagctcctttccgcaggcaggttgtcccagggcct
ggtccgcaaagggaagaaaagcaaaagacgaaaatggctaaattcgtgatccgcccagcc
actgccgccgactgcagtgacatactgcggctgatcaaggagctggctaaatatgaatac
atggaagaacaagtaatcttaactgaaaaagatctgctagaagatggttttggagagcac
cccttttaccactgcctggttgcagaagtgccgaaagagcactggactccggaaggacac
agcattgttggttttgccatgtactattttacctatgacccgtggattggcaagttattg
tatcttgaggacttcttcgtgatgagtgattatagaggctttggcataggatcagaaatt
ctgaagaatctaagccaggttgcaatgaggtgtcgctgcagcagcatgcacttcttggta
gcagaatggaatgaaccatccatcaacttctataaaagaagaggtgcttctgatctgtcc
agtgaagagggttggagactgttcaagatcgacaaggagtacttgctaaaaatggcaaca
gaggagtga

>gi568815575f:23683352_23885853|GENSCAN_predicted_peptide_3|41_aa
MTRDNRVEGYDLTSEVMQYHFGCIQVIVGEVTKVNLSTVAK

>gi568815575f:23683352_23885853|GENSCAN_predicted_CDS_3|126_bp
atgacgagagacaaccgggtggaaggttatgacctaacctcagaagtcatgcagtatcac
tttggctgcatccaggtcattgtgggggaggtcactaaggtgaatctgtcaactgtggca
aagtag

>gi568815575f:23683352_23885853|GENSCAN_predicted_peptide_4|192_aa
MKTILSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKKKKRLRVDKW
WGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGE
KYIRRVRMRPGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIY
VSEKGTVQQADE

>gi568815575f:23683352_23885853|GENSCAN_predicted_CDS_4|579_bp
atgaagactattctcagcaatcagactgtcgacattccagaaaatgtcgacattactctg
aagggacgcacagttatcgtgaagggccccagaggaaccctgcggagggacttcaatcac
atcaatgtagaactcagccttcttggaaagaaaaaaaagaggctccgggttgacaaatgg
tggggtaacagaaaggaactggctaccgttcggactatttgtagtcatgtacagaacatg
atcaagggtgttacactgggcttccgttacaagatgaggtctgtgtatgctcacttcccc
atcaacgttgttatccaggagaatgggtctcttgttgaaatccgaaattttttgggtgaa
aaatacatccgcagggttcggatgagaccaggtgttgcttgttcagtatctcaagcccag
aaagatgaattaatccttgaaggaaatgacattgagcttgtttcaaattcagcggctttg
attcagcaagccacaacagttaaaaacaaggatatcaggaaatttttggatggtatctat
gtctctgaaaaaggaactgttcagcaggctgatgaataa

>gi568815575f:23683352_23885853|GENSCAN_predicted_peptide_5|84_aa
MLNQGNVNENHDGKFWEHLHMLDNSMGLGIEHLQLLKPIKTKQKPDLCAYVDLEHCQKDQ
TGSGSSSPCIQLPMCREYREHVKL

>gi568815575f:23683352_23885853|GENSCAN_predicted_CDS_5|255_bp
atgctcaatcagggcaatgtaaatgaaaaccacgatgggaaattctgggaacatcttcac
atgctagataattcaatgggtctaggcattgagcatctacagctgctaaaaccaataaaa
acaaagcaaaaaccagacttatgtgcctacgtggatctagagcattgccaaaaggatcaa
acaggatctggttcaagtagcccgtgcatccagctgccaatgtgcagggagtacagagaa
cacgttaaactatag

>gi568815575f:23683352_23885853|GENSCAN_predicted_peptide_6|184_aa
ECCVTTQLEKPIGNPKVIQRSVGPASLSLLTFKVYAAPKKDSPPKNSVKVDELSLYSVPE
GQSKYVEEARSQLEESISQLRHYCEPYTTWCQETYSQTKPKMQSLVQWGLDSYDYLQNAP
PGFFPRLGVIGFAGLIGLLLARVLNPDSLIGLQLYVRVQWPQLGELDGFDDKYQYFPAFA
QHCL

>gi568815575f:23683352_23885853|GENSCAN_predicted_CDS_6|555_bp
gaatgctgtgtcaccacccaactagaaaaacccatcggaaaccccaaggtaattcagagg
tccgtggggccagccagcctgagcttgctcaccttcaaagtctatgcagcaccaaaaaag
gactcacctcccaaaaattccgtgaaggttgatgagctttcactctactcagttcctgag
ggtcaatcgaagtatgtggaggaggcaaggagccagcttgaagaaagcatctcacagctc
cgacactattgcgagccatacacaacctggtgtcaggaaacgtactcccaaactaagccc
aagatgcaaagtttggttcaatgggggttagacagctatgactatctccaaaatgcacct
cctggattttttccgagacttggtgttattggttttgctggccttattggactccttttg
gctagagtattgaatccagattccttgattgggctacagttgtatgtgagagtccagtgg
ccccagcttggggagcttgatggctttgatgacaaataccagtactttccagcatttgct
caacattgtttgtaa