GENSCAN 1.0	Date run:  4-Nov-116	Time: 12:15:39

Sequence gi568815583r:51110811_51342912 : 232102 bp : 43.65% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.06 PlyA -   1567   1562    6                               1.05
 1.05 Term -   3510   3497   14  1  2  126   50     9 0.356  -0.74
 1.04 Intr -  10009   9880  130  1  1  100  115    44 0.289   8.57
 1.03 Intr -  19435  19359   77  2  2   60   44    13 0.003  -6.67
 1.02 Intr -  25437  25297  141  1  0   75   75    27 0.382   0.42
 1.01 Init -  25978  25960   19  1  1   84  106    58 0.399   5.43
 1.00 Prom -  29140  29101   40                              -4.36

 2.02 PlyA -  30303  30298    6                               1.05
 2.01 Sngl -  47265  47128  138  0  0   72   43   173 0.188   4.80
 2.00 Prom -  53777  53738   40                              -4.66

 3.00 Prom +  61601  61640   40                              -2.06
 3.01 Sngl +  63433  64092  660  0  0   65   43   299 0.406  19.28
 3.02 PlyA +  64320  64325    6                               1.05

 4.00 Prom +  64489  64528   40                              -4.96
 4.01 Sngl +  64582  67983 3402  0  0   44   47   874 0.498  69.37
 4.02 PlyA +  68210  68215    6                               1.05

 5.12 PlyA -  68364  68359    6                               1.05
 5.11 Term -  71377  71265  113  2  2   78   42   137 0.924   6.82
 5.10 Intr -  99812  99682  131  1  2   54   48    54 0.147  -1.66
 5.09 Intr - 100246 100014  233  1  2   82   39   202 0.340  11.27
 5.08 Intr - 101751 101510  242  1  2  110   64   253 0.998  22.37
 5.07 Intr - 104422 104260  163  1  1   52   91    51 0.959   1.35
 5.06 Intr - 105007 104893  115  0  1   49   69   116 0.949   6.25
 5.05 Intr - 107845 107731  115  2  1   99   75    58 0.949   5.11
 5.04 Intr - 111715 111539  177  2  0   76   36   180 0.770  11.49
 5.03 Intr - 117123 116969  155  2  2  116  121    82 0.979  14.02
 5.02 Intr - 126199 126049  151  2  1   73   89   196 0.804  17.42
 5.01 Init - 132102 131958  145  0  1   71  111    83 0.500   9.18
 5.00 Prom - 133853 133814   40                              -5.76

 6.00 Prom + 141103 141142   40                              -5.06
 6.01 Init + 144817 144913   97  0  1   76   75   117 0.867   9.67
 6.02 Intr + 146305 146330   26  2  2  102   99    15 0.669   1.74
 6.03 Intr + 147883 147938   56  0  2   27  116    58 0.534   0.28
 6.04 Intr + 155072 155232  161  2  2   83   93    41 0.670   3.73
 6.05 Intr + 163250 163321   72  0  0   70   89    48 0.545   2.48
 6.06 Term + 167173 167357  185  2  2  123   44    64 0.335   3.21
 6.07 PlyA + 168211 168216    6                               1.05

 7.05 PlyA - 168472 168467    6                               1.05
 7.04 Term - 185031 184902  130  2  1  135   53    79 0.759   6.75
 7.03 Intr - 190337 190189  149  2  2   53   63    56 0.024  -1.37
 7.02 Intr - 200139 200063   77  1  2   54   78    44 0.045  -0.77
 7.01 Init - 204467 204362  106  2  1   74  102    97 0.554   8.94
 7.00 Prom - 208858 208819   40                              -4.76

 8.00 Prom + 212752 212791   40                              -5.66
 8.01 Init + 230875 231237  363  0  0   72   82   585 0.965  51.35
 8.02 Term + 231242 231370  129  1  0   83   37    45 0.292  -2.92
 8.03 PlyA + 231671 231676    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815583r:51110811_51342912|GENSCAN_predicted_peptide_1|126_aa
MQPRRLGPKSPSLAPSKFRKSVLINARAINPLKENLRTSGQWEKVLTGKLDAAVSVLVSE
AWVEVEYYPSRPGPQNYPLAMKEFSNLLKVGHKSLIPETSSLYLEERNVTQRHREASEQT
GHDETS

>gi568815583r:51110811_51342912|GENSCAN_predicted_CDS_1|381_bp
atgcagccccgccgcctgggtcccaaatcccccagcttagccccttccaagttcaggaaa
tctgtgctcattaatgcaagagccattaaccccttgaaagagaacctcagaacctcagga
caatgggagaaagtgctgacaggcaagcttgacgcagcagtctcagttctagtcagtgaa
gcatgggtggaagtggagtattacccttccaggcctggcccacaaaactacccacttgcc
atgaaagaattctctaatcttctaaaagtaggtcataaaagcctcattccagagacatcc
tccttatacctggaggaaagaaatgtcacacagagacacagagaagcatctgaacaaaca
ggccatgatgaaacatcgtga

>gi568815583r:51110811_51342912|GENSCAN_predicted_peptide_2|45_aa
MRKPKEVPKSGGSKMFWSNDRQSAITVMKPFLCWLLALEALLSVD

>gi568815583r:51110811_51342912|GENSCAN_predicted_CDS_2|138_bp
atgaggaagcccaaagaggtccctaagagtgggggctccaagatgttctggtcaaatgac
aggcagtcggccatcaccgtcatgaagccctttctctgctggcttctggccttggaggct
ctcctgagtgtggactga

>gi568815583r:51110811_51342912|GENSCAN_predicted_peptide_3|219_aa
MEDEMNEMKQEGKFREKRIKRNEQSLQEIWDYVKRPNLRLIGVPESDGENATKLGNTLQD
IIQENFPNLARQANNVQIQEIQRTPQRYSSRRATPRHIIVRFTKVEMKEKMLRAAREKGR
VTLKGKPIRLTVDLSAETLQARREWGPIFNILKGKNFQPRISYPAKLSFISEGEIKYFTD
KQMLRDFVTTRPALKELLKEALNMERNNQYQPLQNHAKM

>gi568815583r:51110811_51342912|GENSCAN_predicted_CDS_3|660_bp
atggaagatgaaatgaatgaaatgaagcaagaagggaagtttagagaaaaaagaataaaa
agaaatgagcaaagcctccaagaaatatgggactatgtgaaaagaccaaatctacgtctg
attggtgtacctgaaagtgatggggagaatgcaaccaagttgggaaacactctgcaggat
attatccaggagaacttccccaatctagcaaggcaggccaacaacgttcagattcaggaa
atacagagaacgccacaaagatactcctcgagaagagcaactccaagacacataattgtc
agattcaccaaagttgaaatgaaggaaaaaatgttaagggcagccagagagaaaggtcga
gttaccctcaaagggaagcccatcagactaacagtggatctctcggcagaaaccctacaa
gccagaagagagtgggggccaatattcaacattcttaaaggaaagaattttcagcccaga
atttcatatccagccaaactaagcttcataagtgaaggagaaataaaatactttacagac
aagcaaatgctgagagattttgtcaccaccaggcctgccctaaaagagctcctgaaggaa
gcgctaaacatggaaaggaacaaccagtaccagccgctgcaaaatcatgccaaaatgtaa

>gi568815583r:51110811_51342912|GENSCAN_predicted_peptide_4|1133_aa
MGDFNTPLSTLDRSTRQKVNKDTQELNSALHQGDLIDIYRTLHPKSTEYTFFSAPHHTYS
KIDHIVGSKALLSKWKRTEIITNYLSDHSAIKLELRIKNLTQSRSTTWKLNNLLLNDYWV
HNEMKAEIKMFFETNENKDTTYQNLWDAFKAVCRGKFIALNAHKRKQERSKIDTLTSQLK
ELEKQEQTHSKASRRQEITKIRAELKEIETQKTLQKINESRSWFFERINKIDRPLARLIK
KKREKNQIDTIKNDKGDITTDPTEIQTTIREYYKHLYSNKLENLEEMDKFLDTYTLPRLN
QEEVESLNRPITGAEIVAIINSLPTKKIPGPDGFTAEFYQRYKEELVPFLLKLFQSIEKE
GILPNSFYEASIILIPKPGRDTTKKENFRPISLMNIDAKILNKILAKRIQQHIKKLIHHD
EVGFIPGMQGWFNIHKSINVIQHINRAKDKNHMIISIDAEKAFDKIQQPFMLKTLNKLGI
DGMYFKIIRAIYDKPTANIMLNGQKLEVFPLKSSTRQGCPLSPLLFNMVLNVLARAIRQE
KAIKGIQIGREEVKLSLFADDVIVYLENPIVSAQNLLKLISNFSKVSGYKINVQKSQAFL
YTNNRQTESQIMSELPFTIASKRIKYLGIQLTRDVKDLFKENYKPLLKEIKEDTNKWKNI
PCSWVGRINIVKMAILPKVIYRFNAIPINLPMTFFTELEKTTLKFIWNQKRARIAKSILS
QKNKAGGITLPDFKLYYKATVTKTAWYWYQNRDIDQWNRTEPSEIMLHTYNYLIFDKPEK
NKQWGKDSLFNKWCWENWLAICRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTLEENLG
ITIQDIGVGKDFMSKTPKAMATKAKIDKWDLIKLKSFCTAGETTIRVNRQPTTWEKIFAT
YSSDKGLISRIYNELKQIYKKKTNNPIKKWARDMNRHFSKEDIYAAKKHMKKCSSSLAIR
EMQIKTTMRYHLTPVRMAIIEKSGNNRCWRGCGEIGTLLHCWWDCKLVQPLWKSVWRFLR
DLELEIPFDPAIPLLGIYPKDYKSCCYKDTCTRMFIAALFTIAKTWNQPKCPTMIDWIKK
MWHIYTMEYYAAIKNDEFMSFVGTWMKLETIILSKLSQEQKTKYRIFSLIGGN

>gi568815583r:51110811_51342912|GENSCAN_predicted_CDS_4|3402_bp
atgggagactttaacaccccactgtcaacattagacagatcaacgagacagaaagtcaac
aaggatacccaggaattgaactcagctctgcaccaaggggacctaatagacatctacaga
actctccaccccaaatcaacagaatatacatttttttcagcaccacaccacacctattcc
aaaattgaccacatagttggaagtaaagctctcctcagcaaatggaaaagaacagaaatt
ataacaaactatctctcagaccacagcgcaatcaaactagaactcaggattaagaatctc
actcaaagccgctcaactacatggaaactgaacaacctgctcctgaatgactactgggta
cataacgaaatgaaggcagaaataaagatgttctttgaaaccaacgagaacaaagacaca
acataccagaatctctgggatgcattcaaagcagtgtgtagagggaaatttatagcacta
aatgcccacaagagaaagcaggaaagatccaaaattgacaccctaacatcacagttaaaa
gaactagaaaagcaagagcaaacacattccaaagctagcagaaggcaagaaataactaaa
atcagagcagaactgaaggaaatagagacacaaaaaacccttcaaaaaatcaatgaatcc
aggagctggttttttgaaaggatcaacaaaattgatagaccactagcaagactaataaag
aaaaaaagagagaagaatcaaatagacacaataaaaaatgataaaggggatatcaccacc
gatcccacagaaatacaaactaccatcagagaatactacaaacacctctattcaaataaa
ctagaaaatctagaagaaatggataaattcctcgacacatacactctcccaagactaaac
caggaagaagttgaatctctgaatagaccaataacaggagctgaaattgtggcaataatc
aatagtttaccaaccaaaaagattccaggaccagatggattcacagccgaattctaccag
aggtacaaggaggaactggtaccattccttctgaaactattccaatcaatagaaaaagag
ggaatcctccctaactcattttatgaggccagcatcattctgataccaaagccgggcaga
gacacaaccaaaaaagagaattttagaccaatatccttgatgaacattgatgcaaaaatc
ctcaataaaatactggcaaaacgaatccagcagcacatcaaaaagcttatccaccatgat
gaagtgggcttcatccctgggatgcaaggctggttcaatatacacaaatcaataaatgta
atccagcatataaacagagccaaagacaaaaaccacatgattatctcaatagatgcagaa
aaagcctttgacaaaattcaacaacccttcatgctaaaaactctcaataaattaggtatt
gatgggatgtatttcaaaataataagagctatctatgacaaacccacagccaatatcatg
ctgaatgggcaaaagctggaagtattccctttgaaaagcagcacaagacaaggatgccct
ctctcaccactcctattcaacatggtactgaatgttctggccagggcaatcaggcaagag
aaagcaataaagggtattcaaataggaagagaggaagtcaaattgtccctgtttgcagat
gacgtgattgtttatctagaaaaccccatcgtctcagcccaaaatctccttaagctaata
agcaacttcagcaaagtctcaggatacaaaatcaatgtacaaaaatcacaagcattccta
tacaccaacaacagacaaacagagagccaaatcatgagtgaactcccattcacaattgct
tcaaagagaataaaatacctaggaatccaacttacaagggatgtgaaggacctcttcaag
gagaactacaaaccactgctcaaggaaataaaagaggatacaaacaaatggaagaacatt
ccatgctcatgggtaggaagaatcaatatcgtgaaaatggccatactgcccaaggtaatt
tatagattcaatgccatccccatcaacctaccaatgactttcttcacagaattggaaaaa
actactttaaagttcatatggaaccaaaaaagagcccgcatcgccaagtcaatcctaagc
caaaagaacaaagctggaggcatcacactacctgacttcaagctatactacaaggctaca
gtaaccaaaacagcatggtactggtaccaaaacagagatatagatcaatggaacagaaca
gagccctcagaaataatgctgcatacctacaactatctgatctttgacaaacctgagaaa
aacaagcaatggggaaaggattccctatttaataaatggtgctgggaaaactggctagcc
atatgtagaaagctgaaactggatcccttccttacaccttatacaaaaatcaattcaaga
tggattaaagatttaaacgttagacctaaaaccataaaaaccctagaagaaaacctaggc
attaccattcaggacataggcgtgggcaaggacttcatgtccaaaactccaaaagcaatg
gcaaccaaagccaaaattgacaaatgggatctaattaaactaaagagcttctgcacagcg
ggggaaactaccatcagagtgaacaggcaacctacaacatgggagaaaattttcgcaacc
tactcatctgacaaagggctaatatccagaatctacaatgaactcaaacaaatttacaag
aaaaaaacaaacaaccccatcaaaaagtgggcgagggacatgaacagacacttctcaaaa
gaagacatttatgcagccaaaaaacacatgaaaaaatgctcatcatcactggccatcaga
gaaatgcaaatcaaaaccactatgagataccatctcacaccagttagaatggcaatcatt
gaaaagtcaggaaacaacaggtgctggagaggatgtggagaaataggaacacttttacac
tgttggtgggactgtaaactagttcaaccattgtggaagtcagtgtggcgattcctcagg
gatctagaactagaaataccatttgacccagccatcccattactgggtatatacccaaag
gactataaatcatgctgctataaagacacatgcacacgtatgtttattgcggcattattc
acaatagcaaagacttggaaccaacccaaatgtccaacaatgatagactggatcaagaaa
atgtggcacatatacaccatggaatactatgcagccataaaaaatgatgagttcatgtcc
tttgtagggacatggatgaaattggaaaccatcattctcagtaaactatcgcaagaacaa
aaaaccaaataccgcatattctcactcataggtgggaattga

>gi568815583r:51110811_51342912|GENSCAN_predicted_peptide_5|579_aa
MVLEMLNPIHYNITSIVPEAMPAATMPVLLLTGLFLLVWNYEGTSSIPGPGYCMGIGPLI
SHGRFLWMGIGSACNYYNRVYGEFMRVWISGEETLIISKSSSMFHIMKHNHYSSRFGSKL
GLQCIGMHEKGIIFNNNPELWKTTRPFFMKALSGPGLVRMVTVCAESLKTHLDRLEEVTN
ESGYVDVLTLLRRVMLDTSNTLFLRIPLDESAIVVKIQGYFDAWQALLIKPDIFFKISWL
YKKYEKSVKDLKDAIEVLIAEKRRRISTEEKLEECMDFATELILAEKRGDLTRENVNQCI
LEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIGERDIKIDDIQKLKVMENFI
YESMRYQPVVDLVMRKALEDDVIDGYPVKKGTNIILNIGRMHRLEFFPKPNEFTLENFAK
NVPYRYFQPFGFGPRGCAGKYIAMVMMKAILVTLLRRFHVKTLQGQCVESIQKIHDLSLH
PDETKNMLEMIFTPRNSDREPGYKRKSRGQEFEGEIVGEETVSIKTRFHQMCFEKDRPSL
TKWEGNCQVMRTRKQPYRKVHMAKNQGLLPIVSINLPAL

>gi568815583r:51110811_51342912|GENSCAN_predicted_CDS_5|1740_bp
atggttttggaaatgctgaacccgatacattataacatcaccagcatcgtgcctgaagcc
atgcctgctgccaccatgccagtcctgctcctcactggcctttttctcttggtgtggaat
tatgagggcacatcctcaataccaggtcctggctactgcatgggaattggacccctcatc
tcccacggcagattcctgtggatggggatcggcagtgcctgcaactactacaaccgggta
tatggagaattcatgcgagtctggatctctggagaggaaacactcattatcagcaagtcc
tcaagtatgttccacataatgaagcacaatcattacagctctcgattcggcagcaaactt
gggctgcagtgcatcggtatgcatgagaaaggcatcatatttaacaacaatccagagctc
tggaaaacaactcgacccttctttatgaaagctctgtcaggccccggccttgttcgtatg
gtcacagtctgtgctgaatccctcaaaacacatctggacaggttggaggaggtgaccaat
gaatcgggctatgtggacgtgttgacccttctgcgtcgtgtcatgctggacacctctaac
acgctcttcttgaggatccctttggacgaaagtgctatcgtggttaaaatccaaggttat
tttgatgcatggcaagctctcctcatcaaaccagacatcttctttaagatttcttggcta
tacaaaaagtatgagaagtctgtcaaggatttgaaagatgccatagaagttctgatagca
gaaaaaagacgcaggatttccacagaagagaaactggaagaatgtatggactttgccact
gagttgattttagcagagaaacgtggtgacctgacaagagagaatgtgaaccagtgcata
ttggaaatgctgatcgcagctcctgacaccatgtctgtctctttgttcttcatgctattt
ctcattgcaaagcaccctaatgttgaagaggcaataataaaggaaatccagactgttatt
ggtgagagagacataaagattgatgatatacaaaaattaaaagtgatggaaaacttcatt
tatgagagcatgcggtaccagcctgtcgtggacttggtcatgcgcaaagccttagaagat
gatgtaatcgatggctacccagtgaaaaaggggacaaacattatcctgaatattggaagg
atgcacagactcgagtttttccccaaacccaatgaatttactcttgaaaattttgcaaag
aatgttccttataggtactttcagccatttggctttgggccccgtggctgtgcaggaaag
tacatcgccatggtgatgatgaaagccatcctcgttacacttctgagacgattccacgtg
aagacattgcaaggacagtgtgttgagagcatacagaagatacacgacttgtccttgcac
ccagatgagactaaaaacatgctggaaatgatctttaccccaagaaactcagacagagaa
ccaggctacaagagaaaaagcagaggccaagagtttgagggagaaatagtcggtgaagaa
accgtatccataaagacccgattccaccaaatgtgctttgagaaggataggccttcatta
acaaaatgggaaggcaactgccaggtcatgaggacacgcaagcagccctacagaaaagtc
cacatggccaagaatcaaggcctcctgccaatagtcagcatcaacttgccagccctgtga

>gi568815583r:51110811_51342912|GENSCAN_predicted_peptide_6|198_aa
MPKFSGDKIHGLLDINPKFHMKAVISGPEKSAASILPSLLLSLEELTEVYDMYLLPEILS
CLSFIRIPGCPLSQSGYRLEDMPGLDKSSDSSRNIANLASANLEGNGWLPLHKELPDKRR
LPLHQVESGTGHVLSTAGKCANIKVTWVCWSLLVFGLLKMVSFANDARLFKNQVAFLAIT
LRVPSFIKVLLVAKRSVA

>gi568815583r:51110811_51342912|GENSCAN_predicted_CDS_6|597_bp
atgcccaagttcagtggagacaaaatccatggcttgcttgatattaatcccaagttccac
atgaaagctgttatcagcggtcctgagaaatcagcagcatcaatactgccctcgttgctg
ctgtctctggaagaactaacagaggtgtacgatatgtacctattgcctgaaattctaagc
tgtttgagcttcattcggatccctggatgcccactgagccagtcaggctacaggctagag
gatatgcctggtctggataaatctagtgatagctccagaaacatagcaaatctagcttcc
gccaaccttgagggaaatggctggcttcctttgcacaaagaattgccagataaaaggaga
cttcctttgcaccaggtagagagtgggactgggcacgtgctgtccacggcaggaaaatgt
gcaaatatcaaggttacctgggtctgctggtcacttctagtttttggactcttgaagatg
gtgagttttgctaatgatgcgcggctgtttaagaaccaggtggcttttctggcaatcact
cttcgtgtgccatcttttataaaggtgcttcttgttgctaagagatcagttgcttag

>gi568815583r:51110811_51342912|GENSCAN_predicted_peptide_7|153_aa
MERMCRSTHNLLTGLQQAWVTVVVKVGSVEKHNQQGSGLNVSSVFKAFVNAVCVPHMHIL
EVASKAQFSFDHSKPQRNTSLMLNVAVTFGSDFPSDSSPPCELVPLSSLERPPCCQDFLT
EGLGWLPEAIQNWTRGTQLNLNVLLSAQEMGRC

>gi568815583r:51110811_51342912|GENSCAN_predicted_CDS_7|462_bp
atggagagaatgtgcagaagcacgcataaccttctgaccggactgcagcaggcctgggtg
acggtggtggtgaaggtggggagtgttgagaaacacaaccagcaaggcagtggtctcaac
gtcagctcagttttcaaagcctttgttaatgctgtttgtgttccacacatgcacatcttg
gaggttgcctcaaaagcccagttttcctttgatcattccaagccccagcgaaatacctct
ttaatgcttaatgtggcagtcacctttggatctgacttcccttctgacagttcaccaccc
tgtgaactggttccattgtcttccctggaaagacctccgtgctgccaggacttcctaacg
gaagggcttggctggctccccgaagccatccagaactggacccgagggacccagctcaac
ttgaatgtccttttatctgcccaggagatgggaagatgctga

>gi568815583r:51110811_51342912|GENSCAN_predicted_peptide_8|163_aa
MARGAEGGRGDAGWGLRGALAAVALLSALNAAGTVFALCQWRGLSSALRALEAQRGREQR
EDSALRSFLAELSRAPRGASAPPQDPASSARNKRSHSGEPAPHIRAESHDMLMMMTYSMV
PAGSLFPVAPRPGGRLGVWGEDADALFSPGQAARCCGEGCGHE

>gi568815583r:51110811_51342912|GENSCAN_predicted_CDS_8|492_bp
atggcccgaggcgctgagggaggccgtggggacgcgggttggggcctgcgtggcgccctg
gcggccgtggcgctgctctcggcgctcaacgctgcgggcacggtgttcgcgctgtgccag
tggcgcgggctgagctcggcgctgcgggctttggaggcgcagcggggccgggagcagcgc
gaggacagtgccctgcgctccttcctggccgagttgagccgcgcgccgcgcggggcgtcc
gcaccaccccaagacccggccagctcagctcgcaacaagcgcagccacagcggcgagccc
gcgccgcatatccgcgccgagagccatgacatgctgatgatgatgacctactccatggtg
ccggcggggtctctgttccccgtggcgccccggccaggtgggcggctgggggtgtggggc
gaggacgccgacgccctcttctcccctggccaggctgcgaggtgctgcggagagggctgt
gggcatgagtag