GENSCAN 1.0	Date run:  4-Nov-116	Time: 12:04:17

Sequence gi568815590r:106661040_106870190 : 209151 bp : 37.46% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  12015  12159  145  2  1   60   54   107 0.698   4.83
 1.02 Intr +  18171  18253   83  1  2   65   93    70 0.867   3.64
 1.03 Intr +  22160  22267  108  1  0   93   67    47 0.840   2.66
 1.04 Intr +  23207  23320  114  1  0  107   93    66 0.765   8.72
 1.05 Intr +  31689  31838  150  2  0  -46   98   148 0.020   1.84
 1.06 Intr +  36476  36763  288  1  0  100   44   216 0.000  14.92
 1.07 Intr +  41867  42051  185  1  2  107   66   173 0.250  14.66
 1.08 Intr +  45343  46106  764  1  2   49  106   678 0.205  55.88
 1.09 Intr +  49583  49751  169  0  1   85   93    56 0.598   3.88
 1.10 Intr +  52784  52946  163  2  1   78   94   174 0.995  16.06
 1.11 Intr +  59639  59704   66  1  0   72   87    40 0.546   0.48
 1.12 Intr +  76481  76561   81  1  0   78   49   103 0.948   4.32
 1.13 Intr +  78419  78544  126  1  0   74   86   138 0.999  12.16
 1.14 Intr +  79304  79456  153  1  0   17   80   166 0.965   8.05
 1.15 Intr +  81183  81278   96  2  0   84   94    44 0.903   3.89
 1.16 Intr +  84750  84823   74  2  2   50  110    45 0.491   0.19
 1.17 Term +  89767  89902  136  1  1   48   36    93 0.228  -3.39
 1.18 PlyA +  91499  91504    6                               1.05

 2.05 PlyA -  91671  91666    6                               1.05
 2.04 Term - 100475  99998  478  1  1   92   46   418 0.994  31.33
 2.03 Intr - 102121 102084   38  1  2   57   77    52 0.550  -2.86
 2.02 Intr - 104431 104284  148  0  1   28   20   164 0.313   2.92
 2.01 Init - 109151 108484  668  2  2  102  100   569 0.974  54.23
 2.00 Prom - 115370 115331   40                              -3.05

 3.00 Prom + 127504 127543   40                              -3.65
 3.01 Init + 128034 128132   99  2  0   49   16    44 0.185  -6.30
 3.02 Intr + 128181 128318  138  2  0   95   -2    98 0.558   1.24
 3.03 Intr + 128979 129154  176  2  2  -27   44   232 0.469   5.12
 3.04 Intr + 129647 130149  503  2  2  102    4   311 0.338  15.80
 3.05 Term + 132261 132523  263  1  2  107   43   131 0.416   5.20
 3.06 PlyA + 132850 132855    6                               1.05

 4.00 Prom + 157944 157983   40                              -2.85
 4.01 Init + 160802 160913  112  1  1   16  113    96 0.563   5.32
 4.02 Term + 161427 161524   98  1  2   90   31    54 0.683  -2.95
 4.03 PlyA + 162220 162225    6                               1.05

 5.05 PlyA - 162269 162264    6                               1.05
 5.04 Term - 167820 167468  353  1  2   43   42   205 0.136   5.06
 5.03 Intr - 168641 168475  167  1  2   22   62   171 0.065   6.58
 5.02 Intr - 177113 176899  215  2  2  -15  115   103 0.062  -0.71
 5.01 Init - 183459 183253  207  0  0   83  100   114 0.729  10.97

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  37014  36332  683  1  2   56   37   585 0.878  43.03
S.002 Term - 175040 174950   91  1  1   82   55    94 0.880   1.71


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815590r:106661040_106870190|GENSCAN_predicted_peptide_1|966_aa
MWKRLWNWVTGRGWNSLEGSEEDRKMWESLELPRNLSNGFDQNADSDNDTGQKKTLDKKD
GRRMSFQKPKGTIEYTVESRDSLNSIALKFDTTPNELVQLNKLFSRAVVTGQVLYVPDPE
YVSSVESSPSLSPVSPLSPTSSEAEFDKTTNPDVHPTEATPSSTFTGIRPARVVSSTSEE
EEAFTEKFLKINCKYITSGKLVIREVPRILLGFLREPVGIPREEPIIPGYCQPTQIPQRP
LHTGHVLSFPEVHSLEDVSGVNAIALSCLQELRDLLHLLEGHGGGLDLLYWDLPLGGTVS
GVLLVTPNNIMFDPHKNDPLVQENGCEEYGIMCPMEEVMSAAMYKEILDSKIKESLPIDI
DQLSGRDFCHSKKMTGSNTEEIDSRIRDAGNDSASTAPRSTEESLSEDVFTESELSPIRE
ELVSSDELRQDKSSGASSESVQTVNQAEVESLTVKSESTGTPGHLRSDTEHSTNEVGTLC
HKTDLNNLEMAIKEDQIADNFQGISGPKEDSTSIKGNSDQDSFLHENSLHQEESQKENMP
CGETAEFKQKQSVNKGKQGKEQNQDSQTEAEELRKLWKTHTMQQTKQQRENIQQVSQKEA
KHKITSADGHIESSALLKEKQRHRLHKFLCLRVGKPMRKTFVSQASATMQQYAQRDKKHE
YWFAVPQERTDHLYAFFIQWSPEIYAEDTGEYTREPGFIVVKKIEESETIEDSSNQAAAR
EWEDFHHVVYSEILQGEEDQKTYQAVVSVAEYHRRIDALNTEELRTLCRRLQITTREDIN
SKQVATVKADLESESFRPNLSDPSELLLPDQIEKLTKHLPPRTIGYPWTLVYGTGKHGTS
LKTLYRTMTGLDTPVLMVIKDSDGQVFGALASEPLKVSDGFYGTGETFVFTFCPEFEVFK
WTGDNMFFIKGDMDSLAFGGGGGEFALWLDGDLYHGRSHSCKTFGNRTLSKKEDFFIQDI
EIWAFE

>gi568815590r:106661040_106870190|GENSCAN_predicted_CDS_1|2901_bp
atgtggaagcgactttggaactgggtaacaggcagaggttggaacagtttggagggctca
gaagaagacaggaagatgtgggaaagtttggaacttcctagaaacttgtcgaatggcttt
gaccaaaatgctgatagtgataatgacactggccaaaagaagaccctagacaagaaagat
ggaagacgaatgtcttttcagaaacctaaagggactattgagtatactgttgaatcaagg
gattctttgaatagcatagccctgaagtttgatacaacacctaacgaacttgttcaatta
aataagttattctcccgagcagttgttactggacaggttctgtatgttcctgatcctgaa
tatgtctccagtgttgagagctctccatctctaagccccgtaagtcctctgtcaccaaca
tcatctgaggctgaatttgataagaccactaatcctgatgtccatccaacagaagcaact
ccctcatctactttcactggtattcgacctgcacgagttgtatcttcaacttctgaggag
gaggaagcatttactgagaaatttcttaaaattaattgcaaatatattaccagtggcaag
ctggttatccgagaagttccgaggattctccttggatttcttagggaaccagttgggatc
cccagagaagagcccatcatcccaggctactgccaacccacccagattcctcagcgtccg
ctgcacacaggccatgttctttccttcccagaggtccacagtttggaagatgtcagtggt
gttaatgccatagcgctcagctgcttgcaggaactgagagatcttctccatctgcttgaa
ggccatggtggaggcctggatcttctttactgggacctgccccttgggggcacagtcagt
ggtgtgctgctagttacaccaaataatataatgtttgatccacataaaaatgaccctttg
gttcaagagaatggctgtgaggaatatggcatcatgtgtccaatggaagaggtgatgtca
gctgcaatgtacaaagaaattttggatagcaaaataaaggaatctttacccatagatata
gatcagctatcaggaagggacttctgccattcaaagaaaatgacaggaagtaacactgag
gaaatagactcaagaatccgagatgcaggtaatgatagtgccagcactgctcctaggagc
actgaggagtctctttctgaagatgtgttcacagaatcagaactttcccctatacgagag
gagcttgtatcttcagatgaactgcgacaagataaatcttctggtgcgtcatcagaatct
gtgcaaactgtcaatcaggctgaagtagaaagtctgacagtcaaatcagaatctactggt
actcctggtcacttaagatctgatactgaacattctacaaatgaagttgggactttatgt
cataaaactgatttaaataatcttgaaatggccattaaggaagatcagattgcagataac
tttcaaggaatatcaggtcctaaagaagacagcacaagtataaaaggtaattcagaccag
gattcttttcttcatgagaattcgttacaccaagaagagagtcaaaaagaaaatatgcct
tgtggggaaacagcagaatttaaacaaaagcaaagtgttaacaaaggaaaacaaggaaag
gagcaaaatcaggactcacagacagaggcagaagagctacgcaaactttggaaaacccat
actatgcaacaaactaaacagcaaagggaaaatattcaacaagtgtcacaaaaagaagct
aagcataaaattacatctgctgatggacacatagaaagttctgcacttttaaaagaaaag
caaaggcatcgattacataagttcttgtgtctcagagttggaaaaccaatgaggaaaacg
tttgtatctcaagcaagtgctacaatgcaacagtatgcacagagagataagaaacatgaa
tattggtttgctgtgccacaagaaaggacagatcacttgtatgccttcttcattcagtgg
agtccagaaatatatgcagaagatactggcgaatataccagagaacctggatttatagta
gtaaaaaagattgaggagtctgaaacaattgaggattctagtaatcaagcagcagccaga
gaatgggaggacttccatcatgttgtgtactcagagatactacaaggagaggaagatcaa
aaaacataccaggctgtagtgtcagtggctgagtatcaccgcaggatcgatgctctaaat
actgaagaactgcgcacactctgcagacgcctccagattactacaagggaagacataaat
tcaaagcaggttgctacagtgaaagcagacctggagtctgaatcttttcgaccaaaccta
agtgatcccagtgaacttttactgccagatcaaattgaaaagcttaccaagcatcttcca
ccaagaacaattggctatccatggactcttgtttatggtactggaaaacatggcacaagc
ttgaaaactctttatcgaacaatgacaggtttagacaccccagtgctgatggtgattaaa
gacagtgatggacaggtttttggtgcgttagcatctgagccactgaaagtgagtgatggc
ttttatggtactggagagacctttgtttttacattctgtccggagtttgaggtctttaag
tggacaggagataatatgttttttatcaaaggagacatggattcactagctttcggtggt
ggaggaggagaatttgcgctttggcttgatggagatctctaccatggaagaagccattct
tgtaaaacgtttgggaatcgtacactttctaagaaggaagatttctttatccaagatatt
gaaatctgggcttttgaataa

>gi568815590r:106661040_106870190|GENSCAN_predicted_peptide_2|443_aa
MAPGEKESGEGPAKSALRKIRTATLVISLARGWQQWANENSIRQAQEPTGWLPGGTQDSP
QAPKPITPPTSHQKAQSAPKSPPRLPEGHGDGQSSEKAPEVSHIKKKEVSKTVVSKTYER
GGDVSHLSHRYERDAGVLEPGQPENDIDRILHSHGSPTRRRKCANLVSELTKGWRVMEQE
EPTWRSDSVDTEDSGYGGEAEERPEQDGVQVAVVRIKRPLPSQGGCLHEEEKYSLYRKIY
GVGSESPFSLSPYRSETEEKIMPLGVPCILKLPLGNQISGSEFGWVNRFTEKLNCKAQQK
YSPVGNLKGRWQQWADEHIQSQKLNPFSEEFDYELAMSTRLHKGDEGYGRPKEGTKTAER
AKRAEEHIYREMMDMCFIICTMARHRRDGKIQVTFGDLFDRYVRISDKVVGILMRARKHG
LVDFEGEMLWQGRDDHVVITLLK

>gi568815590r:106661040_106870190|GENSCAN_predicted_CDS_2|1332_bp
atggctccgggcgaaaaggaaagcggggagggcccagccaagagcgccctccggaagata
cgcacagccaccctggtcatcagcttggcccgaggttggcagcagtgggcgaatgagaac
agcatcaggcaggcccaggagcctacaggctggctgccgggagggacccaggactcacct
caagctcctaaaccaatcacaccccctacttcacaccagaaagctcagagtgccccaaag
tcgccaccccgcctgccagaaggacatggagatggacaaagctcagagaaagcccctgag
gtttctcacatcaaaaagaaagaggtgtccaaaacggtggtcagcaagacttatgagaga
ggaggggacgtgagccacctcagccacaggtacgagagggatgctggtgtgcttgaacct
gggcagccagagaatgacattgacagaatcctccacagccacggctccccaacgcggagg
agaaaatgtgccaacctggtgtctgagctaaccaagggctggagagtgatggagcaggag
gagcccacatggaggagtgacagcgtagacacagaggacagcggctatggaggagaggct
gaggagaggcccgagcaggatggagtgcaggtggctgtggtcaggatcaagcgccccttg
ccctcccaaggagggtgcctgcatgaggaggagaaatactccctctacaggaagatctat
ggagttggcagtgaaagcccattttcactttctccatacagatcggagacagaagagaaa
atcatgcctttaggcgtcccatgcattttgaagctgcctttgggtaaccagatttcggga
agtgagtttggatgggtaaacagatttacagagaaactcaactgcaaagcccaacagaaa
tatagcccagtgggcaacttgaaagggagatggcagcagtgggctgatgaacacatacaa
tcccagaagctcaatcctttcagtgaagagtttgattacgagctggccatgtccacccgc
ctacacaaaggagatgagggctatggccgccccaaagaaggaaccaaaactgctgaaagg
gccaagcgtgctgaggagcacatctacagggaaatgatggacatgtgcttcattatctgc
acaatggctcgccacagacgagatggcaagatccaggttacttttggagatctctttgac
agatacgttcgtatttcagataaagtagtgggcattctcatgcgtgccaggaaacatgga
ctggtagactttgaaggagagatgctatggcaaggccgagatgaccatgttgtgattacg
ctactcaagtga

>gi568815590r:106661040_106870190|GENSCAN_predicted_peptide_3|392_aa
MVSFLKSARPRPTGRNQLRTYLGDPDGTIAKEWNSGAKYWAPVGQLKATSAATGLKTRVS
GFLGKDSLTTPDSSELGALVFENASVRANKSDFPRSSLWSKRKIKVFAAVSVNATIPISR
VQGPFRVLGQEEFLLLHQKETSKEISKGPQKPLGYWLCPLQAVGGGEFGPTWVHVPFSLS
DLKQIKAYLGKFSDDPDRYVDVLQGLGHTFDLTWREVMLLLDQTLAFHEKNAALVAAREF
GDTWYLSQVNDRMTAEERDKFPSGQQAIPSMDPHWDLDSDHGDWSRKHLLTCVLEGLGRI
RKKPMSPVTAILLLLAFGPCIFNLLVKFVSSRIEAIQLQMVLQMEPQMSSTNNFYRGPLD
QPAGPLTGLKSSPLEDTTTAGPLLHPYPAESS

>gi568815590r:106661040_106870190|GENSCAN_predicted_CDS_3|1179_bp
atggtttcattcttgaagtcagcgagaccaagacccactggaaggaaccaactccggaca
tatcttggcgacccagatgggactattgccaaggaatggaattcgggggctaaatactgg
gcacctgtcggccagttaaaagcaactagtgcagccactggactaaagacacgggtgtca
ggctttctgggaaaggactctctaacaacccctgactcttcagagttgggagcattggtt
ttcgagaatgcatctgtaagggccaataaatccgactttcctcggtcctctttgtggtct
aagaggaaaattaaggtttttgctgctgtgtcagtgaatgcaactattccaatcagcagg
gtccagggaccatttcgggttcttgggcaagaggagtttctgctgctgcatcagaaggaa
acaagcaaagaaatctccaagggaccacaaaaacccctgggctattggttatgtcccctt
caagctgtagggggaggggaatttggcccaacctgggtacatgtccccttctccctctct
gatttaaagcagatcaaggcatacctggggaagttttcagatgatcctgataggtatgta
gatgtcctacagggtctaggtcataccttcgacctcacttggagagaagtcatgctattg
ttagatcaaaccctggcctttcatgaaaagaatgcggctttagttgcagcccgagagttt
ggagatacctggtatcttagtcaagtaaatgatagaatgacagccgaagaaagggacaaa
ttccctagcggtcagcaagccatccccagtatggatccccactgggatctagactcagat
catggagactggagtcgtaaacatctgctcacctgtgttctagaaggactagggagaatt
aggaaaaagcccatgagtcctgtgacagccatcttgctattactcgccttcgggccctgt
atttttaacctccttgtcaaatttgtttcctctaggattgaggccatccagctacagatg
gtcttacaaatggaaccccaaatgagctcaactaacaacttctaccgaggacccctggac
caaccagctggccctttgactggcctaaagagttcccctctggaggacactacaactgca
gggccccttcttcacccctatccagcagaaagtagctag

>gi568815590r:106661040_106870190|GENSCAN_predicted_peptide_4|69_aa
MNRRQIEGKRSLIVSRVGSFWWVLGLADFKNEAADLHDRQKSSPSPHSTQEVQLASPLIT
FNSLLQLDI

>gi568815590r:106661040_106870190|GENSCAN_predicted_CDS_4|210_bp
atgaatcgtagacaaattgagggcaaaaggagccttattgtgtccagagttggttccttc
tggtgggttcttggtctcgctgacttcaagaatgaagctgcagaccttcacgatagacag
aaaagttctccaagtccccactcgacccaggaagtccagctggcttcacctctcattacc
tttaactccttgctccaattagatatttaa

>gi568815590r:106661040_106870190|GENSCAN_predicted_peptide_5|313_aa
MAEGKGEAKALSYMAAGKRACAGELSFIKPSDLVRLIHYCENSMKEPTPMIELSPPGPIL
YTWGLLQFKMFIAAIHNSQKVEISKVFIMDKQNLVYTYNGMGKQMGKQNVVYTYNGRVFS
DIKGKKHCYMLQHGRILKALCQRDDNFSETFLKDEVFMREQKDDQKKPEKLEKVDYCKLI
RQHREAEGGTWLGKQSECGRHDFQGQVIQSNMTAAWLSLETHVFGALSHHVRSLKTEATM
LKRALGEATETQRKMPRRPSVADAAYSRPLSLEAFKKTQPQPLWDCSPMREPEREPPTWT
QPNLSTFRDNNHQ

>gi568815590r:106661040_106870190|GENSCAN_predicted_CDS_5|942_bp
atggcagaaggtaaaggagaagcaaaggcactctcttacatggcagctggcaagagagct
tgtgcgggggaactgtcatttataaaaccatcagatctcgtgagacttattcactactgt
gagaacagtatgaaggaacccacccccatgattgaattatctccacctggccccatcctt
tacacgtggggattattacaattcaagatgttcatagcagctattcacaatagtcaaaag
gtggaaatatccaaagtgttcataatggataaacaaaatttggtatatacatacaatgga
atgggtaaacaaatgggtaaacaaaatgtggtatatacatacaatggaagagtcttcagt
gatataaaaggaaagaagcactgctacatgctacaacatggacgaatcttgaaagcatta
tgccaaagagatgataacttcagtgaaacctttctgaaggacgaggtcttcatgcgagaa
caaaaagatgatcagaaaaagcctgaaaaattggaaaaggtagactattgcaagttgata
agacaacacagagaagctgaaggaggaacctggttgggaaagcagtcagaatgtggaaga
catgacttccagggccaggtcatacaaagcaacatgactgctgcttggctgtctcttgag
acacatgtgtttggagccctgagtcaccatgtaagaagtctgaaaactgaagccaccatg
ctgaagagagcccttggagaggccacagagacccagagaaagatgcccaggagacccagt
gtggcagacgcagcctacagcagacctttgagtttggaggccttcaagaagacccagcct
cagccactatgggactgcagtcccatgagagaacctgagcgagagccacctacctggact
cagccaaacctcagcactttcagagataataatcatcagtga