Result of FASTA (omim) for pF1KB8332
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB8332, 612 aa
  1>>>pF1KB8332 612 - 612 aa - 612 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 8.9192+/-0.000372; mu= 5.2773+/- 0.024
 mean_var=228.8766+/-45.808, 0's: 0 Z-trim(120.9): 54  B-trim: 6 in 2/54
 Lambda= 0.084776
 statistics sampled from 36789 (36843) to 36789 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.751), E-opt: 0.2 (0.432), width:  16
 Scan time: 11.580

The best scores are:                                      opt bits E(85289)
NP_001258717 (OMIM: 603331) cytoplasmic dynein 1 i ( 612) 4100 514.4 4.6e-145
NP_001258718 (OMIM: 603331) cytoplasmic dynein 1 i ( 612) 4100 514.4 4.6e-145
NP_001258719 (OMIM: 603331) cytoplasmic dynein 1 i ( 611) 4081 512.0 2.3e-144
NP_001307813 (OMIM: 603331) cytoplasmic dynein 1 i ( 611) 4081 512.0 2.3e-144
NP_001258716 (OMIM: 603331) cytoplasmic dynein 1 i ( 630) 3669 461.7 3.5e-129
NP_001258715 (OMIM: 603331) cytoplasmic dynein 1 i ( 630) 3669 461.7 3.5e-129
NP_001369 (OMIM: 603331) cytoplasmic dynein 1 inte ( 638) 3451 435.0 3.7e-121
NP_001258714 (OMIM: 603331) cytoplasmic dynein 1 i ( 638) 3451 435.0 3.7e-121
NP_001307811 (OMIM: 603331) cytoplasmic dynein 1 i ( 632) 3446 434.4 5.7e-121
NP_001307812 (OMIM: 603331) cytoplasmic dynein 1 i ( 632) 3446 434.4 5.7e-121
XP_006712410 (OMIM: 603331) PREDICTED: cytoplasmic ( 631) 3427 432.1 2.8e-120
XP_016859014 (OMIM: 603331) PREDICTED: cytoplasmic ( 631) 3427 432.1 2.8e-120
NP_001129029 (OMIM: 603772) cytoplasmic dynein 1 i ( 608) 3252 410.7 7.6e-114
NP_001265351 (OMIM: 603772) cytoplasmic dynein 1 i ( 602) 3113 393.6  1e-108
NP_001265350 (OMIM: 603772) cytoplasmic dynein 1 i ( 625) 2907 368.5 3.9e-101
NP_001129028 (OMIM: 603772) cytoplasmic dynein 1 i ( 628) 2773 352.1 3.4e-96
XP_011514164 (OMIM: 603772) PREDICTED: cytoplasmic ( 628) 2773 352.1 3.4e-96
XP_016867294 (OMIM: 603772) PREDICTED: cytoplasmic ( 628) 2773 352.1 3.4e-96
NP_004402 (OMIM: 603772) cytoplasmic dynein 1 inte ( 645) 2748 349.0 2.9e-95
XP_016867293 (OMIM: 603772) PREDICTED: cytoplasmic ( 645) 2748 349.0 2.9e-95
XP_011514163 (OMIM: 603772) PREDICTED: cytoplasmic ( 645) 2748 349.0 2.9e-95
XP_016867295 (OMIM: 603772) PREDICTED: cytoplasmic ( 513) 2093 268.8 3.2e-71
XP_011514165 (OMIM: 603772) PREDICTED: cytoplasmic ( 530) 2068 265.8 2.7e-70
XP_016867296 (OMIM: 603772) PREDICTED: cytoplasmic ( 357)  970 131.4 5.3e-30
NP_075462 (OMIM: 605483,612444) dynein intermediat ( 605)  411 63.2   3e-09
XP_011523427 (OMIM: 605483,612444) PREDICTED: dyne ( 649)  411 63.2 3.2e-09
XP_006716821 (OMIM: 244400,604366) PREDICTED: dyne ( 522)  383 59.7 2.9e-08
NP_001166281 (OMIM: 605483,612444) dynein intermed ( 593)  384 59.9 2.9e-08
NP_036276 (OMIM: 244400,604366) dynein intermediat ( 699)  385 60.0 3.1e-08
NP_001268357 (OMIM: 244400,604366) dynein intermed ( 703)  385 60.0 3.1e-08
XP_011516149 (OMIM: 244400,604366) PREDICTED: dyne ( 621)  358 56.7 2.8e-07
XP_011516148 (OMIM: 244400,604366) PREDICTED: dyne ( 660)  358 56.7 2.9e-07
XP_011517481 (OMIM: 613363,615633) PREDICTED: WD r ( 508)  324 52.5 4.2e-06
XP_011516151 (OMIM: 244400,604366) PREDICTED: dyne ( 546)  260 44.7   0.001


>>NP_001258717 (OMIM: 603331) cytoplasmic dynein 1 inter  (612 aa)
 initn: 4100 init1: 4100 opt: 4100  Z-score: 2725.3  bits: 514.4 E(85289): 4.6e-145
Smith-Waterman score: 4100; 100.0% identity (100.0% similar) in 612 aa overlap (1-612:1-612)

               10        20        30        40        50        60
pF1KB8 MSDKSELKAELERKKQRLAQIREEKKRKEEERKKKETDQKKEAVAPVQEESDLEKKRREA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSDKSELKAELERKKQRLAQIREEKKRKEEERKKKETDQKKEAVAPVQEESDLEKKRREA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 EALLQSMGLTPESPIVPPPMSPSSKSVSTPSEAGSQDSGDGAVGSRRGPIKLGMAKITQV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EALLQSMGLTPESPIVPPPMSPSSKSVSTPSEAGSQDSGDGAVGSRRGPIKLGMAKITQV
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 DFPPREIVTYTKETQTPVMAQPKEDEEEDDDVVAPKPPIEPEEEKTLKKDEENDSKAPPH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DFPPREIVTYTKETQTPVMAQPKEDEEEDDDVVAPKPPIEPEEEKTLKKDEENDSKAPPH
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB8 ELTEEEKQQILHSEEFLSFFDHSTRIVERALSEQINIFFDYSGRDLEDKEGEIQAGAKLS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ELTEEEKQQILHSEEFLSFFDHSTRIVERALSEQINIFFDYSGRDLEDKEGEIQAGAKLS
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB8 LNRQFFDERWSKHRVVSCLDWSSQYPELLVASYNNNEDAPHEPDGVALVWNMKYKKTTPE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LNRQFFDERWSKHRVVSCLDWSSQYPELLVASYNNNEDAPHEPDGVALVWNMKYKKTTPE
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB8 YVFHCQSAVMSATFAKFHPNLVVGGTYSGQIVLWDNRSNKRTPVQRTPLSAAAHTHPVYC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YVFHCQSAVMSATFAKFHPNLVVGGTYSGQIVLWDNRSNKRTPVQRTPLSAAAHTHPVYC
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB8 VNVVGTQNAHNLISISTDGKICSWSLDMLSHPQDSMELVHKQSKAVAVTSMSFPVGDVNN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VNVVGTQNAHNLISISTDGKICSWSLDMLSHPQDSMELVHKQSKAVAVTSMSFPVGDVNN
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB8 FVVGSEEGSVYTACRHGSKAGISEMFEGHQGPITGIHCHAAVGAVDFSHLFVTSSFDWTV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FVVGSEEGSVYTACRHGSKAGISEMFEGHQGPITGIHCHAAVGAVDFSHLFVTSSFDWTV
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB8 KLWTTKNNKPLYSFEDNADYVYDVMWSPTHPALFACVDGMGRLDLWNLNNDTEVPTASIS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KLWTTKNNKPLYSFEDNADYVYDVMWSPTHPALFACVDGMGRLDLWNLNNDTEVPTASIS
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KB8 VEGNPALNRVRWTHSGREIAVGDSEGQIVIYDVGEQIAVPRNDEWARFGRTLAEINANRA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VEGNPALNRVRWTHSGREIAVGDSEGQIVIYDVGEQIAVPRNDEWARFGRTLAEINANRA
              550       560       570       580       590       600

              610  
pF1KB8 DAEEEAATRIPA
       ::::::::::::
NP_001 DAEEEAATRIPA
              610  

>>NP_001258718 (OMIM: 603331) cytoplasmic dynein 1 inter  (612 aa)
 initn: 4100 init1: 4100 opt: 4100  Z-score: 2725.3  bits: 514.4 E(85289): 4.6e-145
Smith-Waterman score: 4100; 100.0% identity (100.0% similar) in 612 aa overlap (1-612:1-612)

               10        20        30        40        50        60
pF1KB8 MSDKSELKAELERKKQRLAQIREEKKRKEEERKKKETDQKKEAVAPVQEESDLEKKRREA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSDKSELKAELERKKQRLAQIREEKKRKEEERKKKETDQKKEAVAPVQEESDLEKKRREA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 EALLQSMGLTPESPIVPPPMSPSSKSVSTPSEAGSQDSGDGAVGSRRGPIKLGMAKITQV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EALLQSMGLTPESPIVPPPMSPSSKSVSTPSEAGSQDSGDGAVGSRRGPIKLGMAKITQV
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 DFPPREIVTYTKETQTPVMAQPKEDEEEDDDVVAPKPPIEPEEEKTLKKDEENDSKAPPH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DFPPREIVTYTKETQTPVMAQPKEDEEEDDDVVAPKPPIEPEEEKTLKKDEENDSKAPPH
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB8 ELTEEEKQQILHSEEFLSFFDHSTRIVERALSEQINIFFDYSGRDLEDKEGEIQAGAKLS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ELTEEEKQQILHSEEFLSFFDHSTRIVERALSEQINIFFDYSGRDLEDKEGEIQAGAKLS
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB8 LNRQFFDERWSKHRVVSCLDWSSQYPELLVASYNNNEDAPHEPDGVALVWNMKYKKTTPE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LNRQFFDERWSKHRVVSCLDWSSQYPELLVASYNNNEDAPHEPDGVALVWNMKYKKTTPE
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB8 YVFHCQSAVMSATFAKFHPNLVVGGTYSGQIVLWDNRSNKRTPVQRTPLSAAAHTHPVYC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YVFHCQSAVMSATFAKFHPNLVVGGTYSGQIVLWDNRSNKRTPVQRTPLSAAAHTHPVYC
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB8 VNVVGTQNAHNLISISTDGKICSWSLDMLSHPQDSMELVHKQSKAVAVTSMSFPVGDVNN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VNVVGTQNAHNLISISTDGKICSWSLDMLSHPQDSMELVHKQSKAVAVTSMSFPVGDVNN
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB8 FVVGSEEGSVYTACRHGSKAGISEMFEGHQGPITGIHCHAAVGAVDFSHLFVTSSFDWTV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FVVGSEEGSVYTACRHGSKAGISEMFEGHQGPITGIHCHAAVGAVDFSHLFVTSSFDWTV
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB8 KLWTTKNNKPLYSFEDNADYVYDVMWSPTHPALFACVDGMGRLDLWNLNNDTEVPTASIS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KLWTTKNNKPLYSFEDNADYVYDVMWSPTHPALFACVDGMGRLDLWNLNNDTEVPTASIS
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KB8 VEGNPALNRVRWTHSGREIAVGDSEGQIVIYDVGEQIAVPRNDEWARFGRTLAEINANRA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VEGNPALNRVRWTHSGREIAVGDSEGQIVIYDVGEQIAVPRNDEWARFGRTLAEINANRA
              550       560       570       580       590       600

              610  
pF1KB8 DAEEEAATRIPA
       ::::::::::::
NP_001 DAEEEAATRIPA
              610  

>>NP_001258719 (OMIM: 603331) cytoplasmic dynein 1 inter  (611 aa)
 initn: 3860 init1: 3860 opt: 4081  Z-score: 2712.8  bits: 512.0 E(85289): 2.3e-144
Smith-Waterman score: 4081; 99.8% identity (99.8% similar) in 612 aa overlap (1-612:1-611)

               10        20        30        40        50        60
pF1KB8 MSDKSELKAELERKKQRLAQIREEKKRKEEERKKKETDQKKEAVAPVQEESDLEKKRREA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSDKSELKAELERKKQRLAQIREEKKRKEEERKKKETDQKKEAVAPVQEESDLEKKRREA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 EALLQSMGLTPESPIVPPPMSPSSKSVSTPSEAGSQDSGDGAVGSRRGPIKLGMAKITQV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EALLQSMGLTPESPIVPPPMSPSSKSVSTPSEAGSQDSGDGAVGSRRGPIKLGMAKITQV
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 DFPPREIVTYTKETQTPVMAQPKEDEEEDDDVVAPKPPIEPEEEKTLKKDEENDSKAPPH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DFPPREIVTYTKETQTPVMAQPKEDEEEDDDVVAPKPPIEPEEEKTLKKDEENDSKAPPH
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB8 ELTEEEKQQILHSEEFLSFFDHSTRIVERALSEQINIFFDYSGRDLEDKEGEIQAGAKLS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ELTEEEKQQILHSEEFLSFFDHSTRIVERALSEQINIFFDYSGRDLEDKEGEIQAGAKLS
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB8 LNRQFFDERWSKHRVVSCLDWSSQYPELLVASYNNNEDAPHEPDGVALVWNMKYKKTTPE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LNRQFFDERWSKHRVVSCLDWSSQYPELLVASYNNNEDAPHEPDGVALVWNMKYKKTTPE
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB8 YVFHCQSAVMSATFAKFHPNLVVGGTYSGQIVLWDNRSNKRTPVQRTPLSAAAHTHPVYC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YVFHCQSAVMSATFAKFHPNLVVGGTYSGQIVLWDNRSNKRTPVQRTPLSAAAHTHPVYC
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB8 VNVVGTQNAHNLISISTDGKICSWSLDMLSHPQDSMELVHKQSKAVAVTSMSFPVGDVNN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VNVVGTQNAHNLISISTDGKICSWSLDMLSHPQDSMELVHKQSKAVAVTSMSFPVGDVNN
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB8 FVVGSEEGSVYTACRHGSKAGISEMFEGHQGPITGIHCHAAVGAVDFSHLFVTSSFDWTV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FVVGSEEGSVYTACRHGSKAGISEMFEGHQGPITGIHCHAAVGAVDFSHLFVTSSFDWTV
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB8 KLWTTKNNKPLYSFEDNADYVYDVMWSPTHPALFACVDGMGRLDLWNLNNDTEVPTASIS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KLWTTKNNKPLYSFEDNADYVYDVMWSPTHPALFACVDGMGRLDLWNLNNDTEVPTASIS
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KB8 VEGNPALNRVRWTHSGREIAVGDSEGQIVIYDVGEQIAVPRNDEWARFGRTLAEINANRA
       ::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::
NP_001 VEGNPALNRVRWTHSGREIAVGDSEGQIVIYDVGE-IAVPRNDEWARFGRTLAEINANRA
              550       560       570        580       590         

              610  
pF1KB8 DAEEEAATRIPA
       ::::::::::::
NP_001 DAEEEAATRIPA
     600       610 

>>NP_001307813 (OMIM: 603331) cytoplasmic dynein 1 inter  (611 aa)
 initn: 3860 init1: 3860 opt: 4081  Z-score: 2712.8  bits: 512.0 E(85289): 2.3e-144
Smith-Waterman score: 4081; 99.8% identity (99.8% similar) in 612 aa overlap (1-612:1-611)

               10        20        30        40        50        60
pF1KB8 MSDKSELKAELERKKQRLAQIREEKKRKEEERKKKETDQKKEAVAPVQEESDLEKKRREA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSDKSELKAELERKKQRLAQIREEKKRKEEERKKKETDQKKEAVAPVQEESDLEKKRREA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 EALLQSMGLTPESPIVPPPMSPSSKSVSTPSEAGSQDSGDGAVGSRRGPIKLGMAKITQV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EALLQSMGLTPESPIVPPPMSPSSKSVSTPSEAGSQDSGDGAVGSRRGPIKLGMAKITQV
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 DFPPREIVTYTKETQTPVMAQPKEDEEEDDDVVAPKPPIEPEEEKTLKKDEENDSKAPPH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DFPPREIVTYTKETQTPVMAQPKEDEEEDDDVVAPKPPIEPEEEKTLKKDEENDSKAPPH
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB8 ELTEEEKQQILHSEEFLSFFDHSTRIVERALSEQINIFFDYSGRDLEDKEGEIQAGAKLS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ELTEEEKQQILHSEEFLSFFDHSTRIVERALSEQINIFFDYSGRDLEDKEGEIQAGAKLS
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB8 LNRQFFDERWSKHRVVSCLDWSSQYPELLVASYNNNEDAPHEPDGVALVWNMKYKKTTPE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LNRQFFDERWSKHRVVSCLDWSSQYPELLVASYNNNEDAPHEPDGVALVWNMKYKKTTPE
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB8 YVFHCQSAVMSATFAKFHPNLVVGGTYSGQIVLWDNRSNKRTPVQRTPLSAAAHTHPVYC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YVFHCQSAVMSATFAKFHPNLVVGGTYSGQIVLWDNRSNKRTPVQRTPLSAAAHTHPVYC
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB8 VNVVGTQNAHNLISISTDGKICSWSLDMLSHPQDSMELVHKQSKAVAVTSMSFPVGDVNN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VNVVGTQNAHNLISISTDGKICSWSLDMLSHPQDSMELVHKQSKAVAVTSMSFPVGDVNN
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB8 FVVGSEEGSVYTACRHGSKAGISEMFEGHQGPITGIHCHAAVGAVDFSHLFVTSSFDWTV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FVVGSEEGSVYTACRHGSKAGISEMFEGHQGPITGIHCHAAVGAVDFSHLFVTSSFDWTV
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB8 KLWTTKNNKPLYSFEDNADYVYDVMWSPTHPALFACVDGMGRLDLWNLNNDTEVPTASIS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KLWTTKNNKPLYSFEDNADYVYDVMWSPTHPALFACVDGMGRLDLWNLNNDTEVPTASIS
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KB8 VEGNPALNRVRWTHSGREIAVGDSEGQIVIYDVGEQIAVPRNDEWARFGRTLAEINANRA
       ::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::
NP_001 VEGNPALNRVRWTHSGREIAVGDSEGQIVIYDVGE-IAVPRNDEWARFGRTLAEINANRA
              550       560       570        580       590         

              610  
pF1KB8 DAEEEAATRIPA
       ::::::::::::
NP_001 DAEEEAATRIPA
     600       610 

>>NP_001258716 (OMIM: 603331) cytoplasmic dynein 1 inter  (630 aa)
 initn: 3642 init1: 3642 opt: 3669  Z-score: 2440.3  bits: 461.7 E(85289): 3.5e-129
Smith-Waterman score: 4054; 97.1% identity (97.1% similar) in 630 aa overlap (1-612:1-630)

               10        20        30        40        50        60
pF1KB8 MSDKSELKAELERKKQRLAQIREEKKRKEEERKKKETDQKKEAVAPVQEESDLEKKRREA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSDKSELKAELERKKQRLAQIREEKKRKEEERKKKETDQKKEAVAPVQEESDLEKKRREA
               10        20        30        40        50        60

               70                          80        90       100  
pF1KB8 EALLQSMGLTPESPI------------------VPPPMSPSSKSVSTPSEAGSQDSGDGA
       :::::::::::::::                  :::::::::::::::::::::::::::
NP_001 EALLQSMGLTPESPIAEQPLRVVTADTCLFHYLVPPPMSPSSKSVSTPSEAGSQDSGDGA
               70        80        90       100       110       120

            110       120       130       140       150       160  
pF1KB8 VGSRRGPIKLGMAKITQVDFPPREIVTYTKETQTPVMAQPKEDEEEDDDVVAPKPPIEPE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VGSRRGPIKLGMAKITQVDFPPREIVTYTKETQTPVMAQPKEDEEEDDDVVAPKPPIEPE
              130       140       150       160       170       180

            170       180       190       200       210       220  
pF1KB8 EEKTLKKDEENDSKAPPHELTEEEKQQILHSEEFLSFFDHSTRIVERALSEQINIFFDYS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EEKTLKKDEENDSKAPPHELTEEEKQQILHSEEFLSFFDHSTRIVERALSEQINIFFDYS
              190       200       210       220       230       240

            230       240       250       260       270       280  
pF1KB8 GRDLEDKEGEIQAGAKLSLNRQFFDERWSKHRVVSCLDWSSQYPELLVASYNNNEDAPHE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GRDLEDKEGEIQAGAKLSLNRQFFDERWSKHRVVSCLDWSSQYPELLVASYNNNEDAPHE
              250       260       270       280       290       300

            290       300       310       320       330       340  
pF1KB8 PDGVALVWNMKYKKTTPEYVFHCQSAVMSATFAKFHPNLVVGGTYSGQIVLWDNRSNKRT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PDGVALVWNMKYKKTTPEYVFHCQSAVMSATFAKFHPNLVVGGTYSGQIVLWDNRSNKRT
              310       320       330       340       350       360

            350       360       370       380       390       400  
pF1KB8 PVQRTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKICSWSLDMLSHPQDSMELVHKQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PVQRTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKICSWSLDMLSHPQDSMELVHKQ
              370       380       390       400       410       420

            410       420       430       440       450       460  
pF1KB8 SKAVAVTSMSFPVGDVNNFVVGSEEGSVYTACRHGSKAGISEMFEGHQGPITGIHCHAAV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SKAVAVTSMSFPVGDVNNFVVGSEEGSVYTACRHGSKAGISEMFEGHQGPITGIHCHAAV
              430       440       450       460       470       480

            470       480       490       500       510       520  
pF1KB8 GAVDFSHLFVTSSFDWTVKLWTTKNNKPLYSFEDNADYVYDVMWSPTHPALFACVDGMGR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GAVDFSHLFVTSSFDWTVKLWTTKNNKPLYSFEDNADYVYDVMWSPTHPALFACVDGMGR
              490       500       510       520       530       540

            530       540       550       560       570       580  
pF1KB8 LDLWNLNNDTEVPTASISVEGNPALNRVRWTHSGREIAVGDSEGQIVIYDVGEQIAVPRN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LDLWNLNNDTEVPTASISVEGNPALNRVRWTHSGREIAVGDSEGQIVIYDVGEQIAVPRN
              550       560       570       580       590       600

            590       600       610  
pF1KB8 DEWARFGRTLAEINANRADAEEEAATRIPA
       ::::::::::::::::::::::::::::::
NP_001 DEWARFGRTLAEINANRADAEEEAATRIPA
              610       620       630

>>NP_001258715 (OMIM: 603331) cytoplasmic dynein 1 inter  (630 aa)
 initn: 3642 init1: 3642 opt: 3669  Z-score: 2440.3  bits: 461.7 E(85289): 3.5e-129
Smith-Waterman score: 4054; 97.1% identity (97.1% similar) in 630 aa overlap (1-612:1-630)

               10        20        30        40        50        60
pF1KB8 MSDKSELKAELERKKQRLAQIREEKKRKEEERKKKETDQKKEAVAPVQEESDLEKKRREA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSDKSELKAELERKKQRLAQIREEKKRKEEERKKKETDQKKEAVAPVQEESDLEKKRREA
               10        20        30        40        50        60

               70                          80        90       100  
pF1KB8 EALLQSMGLTPESPI------------------VPPPMSPSSKSVSTPSEAGSQDSGDGA
       :::::::::::::::                  :::::::::::::::::::::::::::
NP_001 EALLQSMGLTPESPIAEQPLRVVTADTCLFHYLVPPPMSPSSKSVSTPSEAGSQDSGDGA
               70        80        90       100       110       120

            110       120       130       140       150       160  
pF1KB8 VGSRRGPIKLGMAKITQVDFPPREIVTYTKETQTPVMAQPKEDEEEDDDVVAPKPPIEPE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VGSRRGPIKLGMAKITQVDFPPREIVTYTKETQTPVMAQPKEDEEEDDDVVAPKPPIEPE
              130       140       150       160       170       180

            170       180       190       200       210       220  
pF1KB8 EEKTLKKDEENDSKAPPHELTEEEKQQILHSEEFLSFFDHSTRIVERALSEQINIFFDYS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EEKTLKKDEENDSKAPPHELTEEEKQQILHSEEFLSFFDHSTRIVERALSEQINIFFDYS
              190       200       210       220       230       240

            230       240       250       260       270       280  
pF1KB8 GRDLEDKEGEIQAGAKLSLNRQFFDERWSKHRVVSCLDWSSQYPELLVASYNNNEDAPHE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GRDLEDKEGEIQAGAKLSLNRQFFDERWSKHRVVSCLDWSSQYPELLVASYNNNEDAPHE
              250       260       270       280       290       300

            290       300       310       320       330       340  
pF1KB8 PDGVALVWNMKYKKTTPEYVFHCQSAVMSATFAKFHPNLVVGGTYSGQIVLWDNRSNKRT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PDGVALVWNMKYKKTTPEYVFHCQSAVMSATFAKFHPNLVVGGTYSGQIVLWDNRSNKRT
              310       320       330       340       350       360

            350       360       370       380       390       400  
pF1KB8 PVQRTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKICSWSLDMLSHPQDSMELVHKQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PVQRTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKICSWSLDMLSHPQDSMELVHKQ
              370       380       390       400       410       420

            410       420       430       440       450       460  
pF1KB8 SKAVAVTSMSFPVGDVNNFVVGSEEGSVYTACRHGSKAGISEMFEGHQGPITGIHCHAAV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SKAVAVTSMSFPVGDVNNFVVGSEEGSVYTACRHGSKAGISEMFEGHQGPITGIHCHAAV
              430       440       450       460       470       480

            470       480       490       500       510       520  
pF1KB8 GAVDFSHLFVTSSFDWTVKLWTTKNNKPLYSFEDNADYVYDVMWSPTHPALFACVDGMGR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GAVDFSHLFVTSSFDWTVKLWTTKNNKPLYSFEDNADYVYDVMWSPTHPALFACVDGMGR
              490       500       510       520       530       540

            530       540       550       560       570       580  
pF1KB8 LDLWNLNNDTEVPTASISVEGNPALNRVRWTHSGREIAVGDSEGQIVIYDVGEQIAVPRN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LDLWNLNNDTEVPTASISVEGNPALNRVRWTHSGREIAVGDSEGQIVIYDVGEQIAVPRN
              550       560       570       580       590       600

            590       600       610  
pF1KB8 DEWARFGRTLAEINANRADAEEEAATRIPA
       ::::::::::::::::::::::::::::::
NP_001 DEWARFGRTLAEINANRADAEEEAATRIPA
              610       620       630

>>NP_001369 (OMIM: 603331) cytoplasmic dynein 1 intermed  (638 aa)
 initn: 3885 init1: 3434 opt: 3451  Z-score: 2296.1  bits: 435.0 E(85289): 3.7e-121
Smith-Waterman score: 4028; 95.9% identity (95.9% similar) in 638 aa overlap (1-612:1-638)

               10        20        30        40        50        60
pF1KB8 MSDKSELKAELERKKQRLAQIREEKKRKEEERKKKETDQKKEAVAPVQEESDLEKKRREA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSDKSELKAELERKKQRLAQIREEKKRKEEERKKKETDQKKEAVAPVQEESDLEKKRREA
               10        20        30        40        50        60

               70              80        90       100              
pF1KB8 EALLQSMGLTPESPIV------PPPMSPSSKSVSTPSEAGSQDSGDGAVGSR--------
       ::::::::::::::::      ::::::::::::::::::::::::::::::        
NP_001 EALLQSMGLTPESPIVFSEYWVPPPMSPSSKSVSTPSEAGSQDSGDGAVGSRTLHWDTDP
               70        80        90       100       110       120

                    110       120       130       140       150    
pF1KB8 ------------RGPIKLGMAKITQVDFPPREIVTYTKETQTPVMAQPKEDEEEDDDVVA
                   ::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SVLQLHSDSDLGRGPIKLGMAKITQVDFPPREIVTYTKETQTPVMAQPKEDEEEDDDVVA
              130       140       150       160       170       180

          160       170       180       190       200       210    
pF1KB8 PKPPIEPEEEKTLKKDEENDSKAPPHELTEEEKQQILHSEEFLSFFDHSTRIVERALSEQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PKPPIEPEEEKTLKKDEENDSKAPPHELTEEEKQQILHSEEFLSFFDHSTRIVERALSEQ
              190       200       210       220       230       240

          220       230       240       250       260       270    
pF1KB8 INIFFDYSGRDLEDKEGEIQAGAKLSLNRQFFDERWSKHRVVSCLDWSSQYPELLVASYN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 INIFFDYSGRDLEDKEGEIQAGAKLSLNRQFFDERWSKHRVVSCLDWSSQYPELLVASYN
              250       260       270       280       290       300

          280       290       300       310       320       330    
pF1KB8 NNEDAPHEPDGVALVWNMKYKKTTPEYVFHCQSAVMSATFAKFHPNLVVGGTYSGQIVLW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NNEDAPHEPDGVALVWNMKYKKTTPEYVFHCQSAVMSATFAKFHPNLVVGGTYSGQIVLW
              310       320       330       340       350       360

          340       350       360       370       380       390    
pF1KB8 DNRSNKRTPVQRTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKICSWSLDMLSHPQD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DNRSNKRTPVQRTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKICSWSLDMLSHPQD
              370       380       390       400       410       420

          400       410       420       430       440       450    
pF1KB8 SMELVHKQSKAVAVTSMSFPVGDVNNFVVGSEEGSVYTACRHGSKAGISEMFEGHQGPIT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SMELVHKQSKAVAVTSMSFPVGDVNNFVVGSEEGSVYTACRHGSKAGISEMFEGHQGPIT
              430       440       450       460       470       480

          460       470       480       490       500       510    
pF1KB8 GIHCHAAVGAVDFSHLFVTSSFDWTVKLWTTKNNKPLYSFEDNADYVYDVMWSPTHPALF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GIHCHAAVGAVDFSHLFVTSSFDWTVKLWTTKNNKPLYSFEDNADYVYDVMWSPTHPALF
              490       500       510       520       530       540

          520       530       540       550       560       570    
pF1KB8 ACVDGMGRLDLWNLNNDTEVPTASISVEGNPALNRVRWTHSGREIAVGDSEGQIVIYDVG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ACVDGMGRLDLWNLNNDTEVPTASISVEGNPALNRVRWTHSGREIAVGDSEGQIVIYDVG
              550       560       570       580       590       600

          580       590       600       610  
pF1KB8 EQIAVPRNDEWARFGRTLAEINANRADAEEEAATRIPA
       ::::::::::::::::::::::::::::::::::::::
NP_001 EQIAVPRNDEWARFGRTLAEINANRADAEEEAATRIPA
              610       620       630        

>>NP_001258714 (OMIM: 603331) cytoplasmic dynein 1 inter  (638 aa)
 initn: 3885 init1: 3434 opt: 3451  Z-score: 2296.1  bits: 435.0 E(85289): 3.7e-121
Smith-Waterman score: 4028; 95.9% identity (95.9% similar) in 638 aa overlap (1-612:1-638)

               10        20        30        40        50        60
pF1KB8 MSDKSELKAELERKKQRLAQIREEKKRKEEERKKKETDQKKEAVAPVQEESDLEKKRREA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSDKSELKAELERKKQRLAQIREEKKRKEEERKKKETDQKKEAVAPVQEESDLEKKRREA
               10        20        30        40        50        60

               70              80        90       100              
pF1KB8 EALLQSMGLTPESPIV------PPPMSPSSKSVSTPSEAGSQDSGDGAVGSR--------
       ::::::::::::::::      ::::::::::::::::::::::::::::::        
NP_001 EALLQSMGLTPESPIVFSEYWVPPPMSPSSKSVSTPSEAGSQDSGDGAVGSRTLHWDTDP
               70        80        90       100       110       120

                    110       120       130       140       150    
pF1KB8 ------------RGPIKLGMAKITQVDFPPREIVTYTKETQTPVMAQPKEDEEEDDDVVA
                   ::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SVLQLHSDSDLGRGPIKLGMAKITQVDFPPREIVTYTKETQTPVMAQPKEDEEEDDDVVA
              130       140       150       160       170       180

          160       170       180       190       200       210    
pF1KB8 PKPPIEPEEEKTLKKDEENDSKAPPHELTEEEKQQILHSEEFLSFFDHSTRIVERALSEQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PKPPIEPEEEKTLKKDEENDSKAPPHELTEEEKQQILHSEEFLSFFDHSTRIVERALSEQ
              190       200       210       220       230       240

          220       230       240       250       260       270    
pF1KB8 INIFFDYSGRDLEDKEGEIQAGAKLSLNRQFFDERWSKHRVVSCLDWSSQYPELLVASYN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 INIFFDYSGRDLEDKEGEIQAGAKLSLNRQFFDERWSKHRVVSCLDWSSQYPELLVASYN
              250       260       270       280       290       300

          280       290       300       310       320       330    
pF1KB8 NNEDAPHEPDGVALVWNMKYKKTTPEYVFHCQSAVMSATFAKFHPNLVVGGTYSGQIVLW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NNEDAPHEPDGVALVWNMKYKKTTPEYVFHCQSAVMSATFAKFHPNLVVGGTYSGQIVLW
              310       320       330       340       350       360

          340       350       360       370       380       390    
pF1KB8 DNRSNKRTPVQRTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKICSWSLDMLSHPQD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DNRSNKRTPVQRTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKICSWSLDMLSHPQD
              370       380       390       400       410       420

          400       410       420       430       440       450    
pF1KB8 SMELVHKQSKAVAVTSMSFPVGDVNNFVVGSEEGSVYTACRHGSKAGISEMFEGHQGPIT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SMELVHKQSKAVAVTSMSFPVGDVNNFVVGSEEGSVYTACRHGSKAGISEMFEGHQGPIT
              430       440       450       460       470       480

          460       470       480       490       500       510    
pF1KB8 GIHCHAAVGAVDFSHLFVTSSFDWTVKLWTTKNNKPLYSFEDNADYVYDVMWSPTHPALF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GIHCHAAVGAVDFSHLFVTSSFDWTVKLWTTKNNKPLYSFEDNADYVYDVMWSPTHPALF
              490       500       510       520       530       540

          520       530       540       550       560       570    
pF1KB8 ACVDGMGRLDLWNLNNDTEVPTASISVEGNPALNRVRWTHSGREIAVGDSEGQIVIYDVG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ACVDGMGRLDLWNLNNDTEVPTASISVEGNPALNRVRWTHSGREIAVGDSEGQIVIYDVG
              550       560       570       580       590       600

          580       590       600       610  
pF1KB8 EQIAVPRNDEWARFGRTLAEINANRADAEEEAATRIPA
       ::::::::::::::::::::::::::::::::::::::
NP_001 EQIAVPRNDEWARFGRTLAEINANRADAEEEAATRIPA
              610       620       630        

>>NP_001307811 (OMIM: 603331) cytoplasmic dynein 1 inter  (632 aa)
 initn: 4086 init1: 3434 opt: 3446  Z-score: 2292.8  bits: 434.4 E(85289): 5.7e-121
Smith-Waterman score: 4050; 96.8% identity (96.8% similar) in 632 aa overlap (1-612:1-632)

               10        20        30        40        50        60
pF1KB8 MSDKSELKAELERKKQRLAQIREEKKRKEEERKKKETDQKKEAVAPVQEESDLEKKRREA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSDKSELKAELERKKQRLAQIREEKKRKEEERKKKETDQKKEAVAPVQEESDLEKKRREA
               10        20        30        40        50        60

               70        80        90       100                    
pF1KB8 EALLQSMGLTPESPIVPPPMSPSSKSVSTPSEAGSQDSGDGAVGSR--------------
       ::::::::::::::::::::::::::::::::::::::::::::::              
NP_001 EALLQSMGLTPESPIVPPPMSPSSKSVSTPSEAGSQDSGDGAVGSRTLHWDTDPSVLQLH
               70        80        90       100       110       120

              110       120       130       140       150       160
pF1KB8 ------RGPIKLGMAKITQVDFPPREIVTYTKETQTPVMAQPKEDEEEDDDVVAPKPPIE
             ::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SDSDLGRGPIKLGMAKITQVDFPPREIVTYTKETQTPVMAQPKEDEEEDDDVVAPKPPIE
              130       140       150       160       170       180

              170       180       190       200       210       220
pF1KB8 PEEEKTLKKDEENDSKAPPHELTEEEKQQILHSEEFLSFFDHSTRIVERALSEQINIFFD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PEEEKTLKKDEENDSKAPPHELTEEEKQQILHSEEFLSFFDHSTRIVERALSEQINIFFD
              190       200       210       220       230       240

              230       240       250       260       270       280
pF1KB8 YSGRDLEDKEGEIQAGAKLSLNRQFFDERWSKHRVVSCLDWSSQYPELLVASYNNNEDAP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YSGRDLEDKEGEIQAGAKLSLNRQFFDERWSKHRVVSCLDWSSQYPELLVASYNNNEDAP
              250       260       270       280       290       300

              290       300       310       320       330       340
pF1KB8 HEPDGVALVWNMKYKKTTPEYVFHCQSAVMSATFAKFHPNLVVGGTYSGQIVLWDNRSNK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HEPDGVALVWNMKYKKTTPEYVFHCQSAVMSATFAKFHPNLVVGGTYSGQIVLWDNRSNK
              310       320       330       340       350       360

              350       360       370       380       390       400
pF1KB8 RTPVQRTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKICSWSLDMLSHPQDSMELVH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RTPVQRTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKICSWSLDMLSHPQDSMELVH
              370       380       390       400       410       420

              410       420       430       440       450       460
pF1KB8 KQSKAVAVTSMSFPVGDVNNFVVGSEEGSVYTACRHGSKAGISEMFEGHQGPITGIHCHA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KQSKAVAVTSMSFPVGDVNNFVVGSEEGSVYTACRHGSKAGISEMFEGHQGPITGIHCHA
              430       440       450       460       470       480

              470       480       490       500       510       520
pF1KB8 AVGAVDFSHLFVTSSFDWTVKLWTTKNNKPLYSFEDNADYVYDVMWSPTHPALFACVDGM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AVGAVDFSHLFVTSSFDWTVKLWTTKNNKPLYSFEDNADYVYDVMWSPTHPALFACVDGM
              490       500       510       520       530       540

              530       540       550       560       570       580
pF1KB8 GRLDLWNLNNDTEVPTASISVEGNPALNRVRWTHSGREIAVGDSEGQIVIYDVGEQIAVP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GRLDLWNLNNDTEVPTASISVEGNPALNRVRWTHSGREIAVGDSEGQIVIYDVGEQIAVP
              550       560       570       580       590       600

              590       600       610  
pF1KB8 RNDEWARFGRTLAEINANRADAEEEAATRIPA
       ::::::::::::::::::::::::::::::::
NP_001 RNDEWARFGRTLAEINANRADAEEEAATRIPA
              610       620       630  

>>NP_001307812 (OMIM: 603331) cytoplasmic dynein 1 inter  (632 aa)
 initn: 4086 init1: 3434 opt: 3446  Z-score: 2292.8  bits: 434.4 E(85289): 5.7e-121
Smith-Waterman score: 4050; 96.8% identity (96.8% similar) in 632 aa overlap (1-612:1-632)

               10        20        30        40        50        60
pF1KB8 MSDKSELKAELERKKQRLAQIREEKKRKEEERKKKETDQKKEAVAPVQEESDLEKKRREA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSDKSELKAELERKKQRLAQIREEKKRKEEERKKKETDQKKEAVAPVQEESDLEKKRREA
               10        20        30        40        50        60

               70        80        90       100                    
pF1KB8 EALLQSMGLTPESPIVPPPMSPSSKSVSTPSEAGSQDSGDGAVGSR--------------
       ::::::::::::::::::::::::::::::::::::::::::::::              
NP_001 EALLQSMGLTPESPIVPPPMSPSSKSVSTPSEAGSQDSGDGAVGSRTLHWDTDPSVLQLH
               70        80        90       100       110       120

              110       120       130       140       150       160
pF1KB8 ------RGPIKLGMAKITQVDFPPREIVTYTKETQTPVMAQPKEDEEEDDDVVAPKPPIE
             ::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SDSDLGRGPIKLGMAKITQVDFPPREIVTYTKETQTPVMAQPKEDEEEDDDVVAPKPPIE
              130       140       150       160       170       180

              170       180       190       200       210       220
pF1KB8 PEEEKTLKKDEENDSKAPPHELTEEEKQQILHSEEFLSFFDHSTRIVERALSEQINIFFD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PEEEKTLKKDEENDSKAPPHELTEEEKQQILHSEEFLSFFDHSTRIVERALSEQINIFFD
              190       200       210       220       230       240

              230       240       250       260       270       280
pF1KB8 YSGRDLEDKEGEIQAGAKLSLNRQFFDERWSKHRVVSCLDWSSQYPELLVASYNNNEDAP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YSGRDLEDKEGEIQAGAKLSLNRQFFDERWSKHRVVSCLDWSSQYPELLVASYNNNEDAP
              250       260       270       280       290       300

              290       300       310       320       330       340
pF1KB8 HEPDGVALVWNMKYKKTTPEYVFHCQSAVMSATFAKFHPNLVVGGTYSGQIVLWDNRSNK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HEPDGVALVWNMKYKKTTPEYVFHCQSAVMSATFAKFHPNLVVGGTYSGQIVLWDNRSNK
              310       320       330       340       350       360

              350       360       370       380       390       400
pF1KB8 RTPVQRTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKICSWSLDMLSHPQDSMELVH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RTPVQRTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKICSWSLDMLSHPQDSMELVH
              370       380       390       400       410       420

              410       420       430       440       450       460
pF1KB8 KQSKAVAVTSMSFPVGDVNNFVVGSEEGSVYTACRHGSKAGISEMFEGHQGPITGIHCHA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KQSKAVAVTSMSFPVGDVNNFVVGSEEGSVYTACRHGSKAGISEMFEGHQGPITGIHCHA
              430       440       450       460       470       480

              470       480       490       500       510       520
pF1KB8 AVGAVDFSHLFVTSSFDWTVKLWTTKNNKPLYSFEDNADYVYDVMWSPTHPALFACVDGM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AVGAVDFSHLFVTSSFDWTVKLWTTKNNKPLYSFEDNADYVYDVMWSPTHPALFACVDGM
              490       500       510       520       530       540

              530       540       550       560       570       580
pF1KB8 GRLDLWNLNNDTEVPTASISVEGNPALNRVRWTHSGREIAVGDSEGQIVIYDVGEQIAVP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GRLDLWNLNNDTEVPTASISVEGNPALNRVRWTHSGREIAVGDSEGQIVIYDVGEQIAVP
              550       560       570       580       590       600

              590       600       610  
pF1KB8 RNDEWARFGRTLAEINANRADAEEEAATRIPA
       ::::::::::::::::::::::::::::::::
NP_001 RNDEWARFGRTLAEINANRADAEEEAATRIPA
              610       620       630  




612 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 11:50:20 2016 done: Fri Nov  4 11:50:22 2016
 Total Scan time: 11.580 Total Display time:  0.140

Function used was FASTA [36.3.4 Apr, 2011]
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