FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB8319, 299 aa 1>>>pF1KB8319 299 - 299 aa - 299 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.7111+/-0.000773; mu= 14.7756+/- 0.047 mean_var=89.0114+/-17.687, 0's: 0 Z-trim(109.9): 8 B-trim: 46 in 1/51 Lambda= 0.135941 statistics sampled from 11197 (11201) to 11197 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.729), E-opt: 0.2 (0.344), width: 16 Scan time: 1.760 The best scores are: opt bits E(32554) CCDS76876.1 CIAPIN1 gene_id:57019|Hs108|chr16 ( 299) 1940 390.0 1.1e-108 CCDS10781.2 CIAPIN1 gene_id:57019|Hs108|chr16 ( 312) 1606 324.5 6.2e-89 CCDS76877.1 CIAPIN1 gene_id:57019|Hs108|chr16 ( 266) 914 188.8 3.9e-48 >>CCDS76876.1 CIAPIN1 gene_id:57019|Hs108|chr16 (299 aa) initn: 1940 init1: 1940 opt: 1940 Z-score: 2064.4 bits: 390.0 E(32554): 1.1e-108 Smith-Waterman score: 1940; 99.0% identity (99.3% similar) in 299 aa overlap (1-299:1-299) 10 20 30 40 50 60 pF1KB8 MADFGISAGQFVAVVWDKSSPVEALKGLVDKLQALTGNEGRVSVENIKQLLQCLVPGSTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 MADFGISAGQFVAVVWDKSSPVEALKGLVDKLQALTGNEGRVSVENIKQLLQCLVPGSTT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB8 LHSAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGLVEVKELQRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 LHSAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGLVEVKELQRE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB8 PLTPEEVQFVREHLGHESDNLLFVQITGKKPNFEVGSSRQLKLSITKKSSPSVKPAVDPA :::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 PLTPEEVQSVREHLGHESDNLLFVQITGKKPNFEVGSSRQLKLSITKKSSPSVKPAVDPA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB8 AAKLWTLSANDMEDDSMDLIDSDELLDPEDLKKPDPASLRAASCGEGKKRKACKNCTCGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 AAKLWTLSANDMEDDSMDLIDSDELLDPEDLKKPDPASLRAASCGEGKKRKACKNCTCGL 190 200 210 220 230 240 250 260 270 280 290 pF1KB8 AEELEKEKSREQMSSQPKSACGNCYLGDAFRCASCTYLGMPAFKPGEKVLLSDSNLNDA ::::::::::::::::::::::::::::::::::: ::::::::::::::::::::.:: CCDS76 AEELEKEKSREQMSSQPKSACGNCYLGDAFRCASCPYLGMPAFKPGEKVLLSDSNLHDA 250 260 270 280 290 >>CCDS10781.2 CIAPIN1 gene_id:57019|Hs108|chr16 (312 aa) initn: 1603 init1: 1603 opt: 1606 Z-score: 1710.1 bits: 324.5 E(32554): 6.2e-89 Smith-Waterman score: 1890; 94.6% identity (94.9% similar) in 312 aa overlap (1-299:1-312) 10 20 30 40 50 pF1KB8 MADFGISAGQFVAVVWDKSSPVEALKGLVDKLQALTGNEGRVSVENIKQLLQC------- :::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 MADFGISAGQFVAVVWDKSSPVEALKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSF 10 20 30 40 50 60 60 70 80 90 100 pF1KB8 ------LVPGSTTLHSAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALT :::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 DIILSGLVPGSTTLHSAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALT 70 80 90 100 110 120 110 120 130 140 150 160 pF1KB8 LSGLVEVKELQREPLTPEEVQFVREHLGHESDNLLFVQITGKKPNFEVGSSRQLKLSITK ::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::: CCDS10 LSGLVEVKELQREPLTPEEVQSVREHLGHESDNLLFVQITGKKPNFEVGSSRQLKLSITK 130 140 150 160 170 180 170 180 190 200 210 220 pF1KB8 KSSPSVKPAVDPAAAKLWTLSANDMEDDSMDLIDSDELLDPEDLKKPDPASLRAASCGEG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 KSSPSVKPAVDPAAAKLWTLSANDMEDDSMDLIDSDELLDPEDLKKPDPASLRAASCGEG 190 200 210 220 230 240 230 240 250 260 270 280 pF1KB8 KKRKACKNCTCGLAEELEKEKSREQMSSQPKSACGNCYLGDAFRCASCTYLGMPAFKPGE :::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::: CCDS10 KKRKACKNCTCGLAEELEKEKSREQMSSQPKSACGNCYLGDAFRCASCPYLGMPAFKPGE 250 260 270 280 290 300 290 pF1KB8 KVLLSDSNLNDA :::::::::.:: CCDS10 KVLLSDSNLHDA 310 >>CCDS76877.1 CIAPIN1 gene_id:57019|Hs108|chr16 (266 aa) initn: 1221 init1: 907 opt: 914 Z-score: 977.6 bits: 188.8 E(32554): 3.9e-48 Smith-Waterman score: 1198; 92.5% identity (92.5% similar) in 212 aa overlap (1-199:1-212) 10 20 30 40 50 pF1KB8 MADFGISAGQFVAVVWDKSSPVEALKGLVDKLQALTGNEGRVSVENIKQLLQC------- :::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 MADFGISAGQFVAVVWDKSSPVEALKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSF 10 20 30 40 50 60 60 70 80 90 100 pF1KB8 ------LVPGSTTLHSAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALT :::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 DIILSGLVPGSTTLHSAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALT 70 80 90 100 110 120 110 120 130 140 150 160 pF1KB8 LSGLVEVKELQREPLTPEEVQFVREHLGHESDNLLFVQITGKKPNFEVGSSRQLKLSITK ::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::: CCDS76 LSGLVEVKELQREPLTPEEVQSVREHLGHESDNLLFVQITGKKPNFEVGSSRQLKLSITK 130 140 150 160 170 180 170 180 190 200 210 220 pF1KB8 KSSPSVKPAVDPAAAKLWTLSANDMEDDSMDLIDSDELLDPEDLKKPDPASLRAASCGEG :::::::::::::::::::::::::::::: : CCDS76 KSSPSVKPAVDPAAAKLWTLSANDMEDDSMHLWPCRRTGKREVKGTDELPTQVSLWKLLP 190 200 210 220 230 240 230 240 250 260 270 280 pF1KB8 KKRKACKNCTCGLAEELEKEKSREQMSSQPKSACGNCYLGDAFRCASCTYLGMPAFKPGE CCDS76 GRCLPLCQLPLPWDASLQTWGKGASE 250 260 299 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Fri Nov 4 11:42:49 2016 done: Fri Nov 4 11:42:49 2016 Total Scan time: 1.760 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]