Result of FASTA (omim) for
pF1KB8306
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8306, 142 aa
1>>>pF1KB8306 142 - 142 aa - 142 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.7533+/-0.000281; mu= 6.9317+/- 0.018
mean_var=139.2480+/-28.046, 0's: 0 Z-trim(122.3): 13 B-trim: 0 in 0/56
Lambda= 0.108688
statistics sampled from 40224 (40237) to 40224 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.812), E-opt: 0.2 (0.472), width: 16
Scan time: 5.180
The best scores are: opt bits E(85289)
NP_001273549 (OMIM: 611110) MAP3K7 C-terminal-like ( 142) 902 151.3 4.8e-37
NP_001273548 (OMIM: 611110) MAP3K7 C-terminal-like ( 142) 902 151.3 4.8e-37
NP_001273546 (OMIM: 611110) MAP3K7 C-terminal-like ( 142) 902 151.3 4.8e-37
NP_001273547 (OMIM: 611110) MAP3K7 C-terminal-like ( 142) 902 151.3 4.8e-37
NP_001273551 (OMIM: 611110) MAP3K7 C-terminal-like ( 136) 768 130.3 9.9e-31
NP_001273563 (OMIM: 611110) MAP3K7 C-terminal-like ( 242) 760 129.3 3.6e-30
NP_064537 (OMIM: 611110) MAP3K7 C-terminal-like pr ( 242) 760 129.3 3.6e-30
NP_001273553 (OMIM: 611110) MAP3K7 C-terminal-like ( 87) 523 91.7 2.6e-19
XP_016866715 (OMIM: 157800,602614,617137) PREDICTE ( 449) 453 81.4 1.8e-15
XP_006715616 (OMIM: 157800,602614,617137) PREDICTE ( 476) 453 81.4 1.8e-15
NP_003179 (OMIM: 157800,602614,617137) mitogen-act ( 579) 453 81.5 2.1e-15
NP_663304 (OMIM: 157800,602614,617137) mitogen-act ( 606) 453 81.5 2.2e-15
>>NP_001273549 (OMIM: 611110) MAP3K7 C-terminal-like pro (142 aa)
initn: 902 init1: 902 opt: 902 Z-score: 786.0 bits: 151.3 E(85289): 4.8e-37
Smith-Waterman score: 902; 97.9% identity (99.3% similar) in 142 aa overlap (1-142:1-142)
10 20 30 40 50 60
pF1KB8 MISTARVPADKPVRIAFSLNDASDDTPPEDSIPLVFPELDQQLQPLPPCHDSEESMEVFR
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.
NP_001 MISTARVPADKPVRIAFSLNDASDDTPPEDSIPLVFPELDQQLQPLPPCHDSEESMEVFK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 QHCQIAEEYLEVKKEITLLEQRKKELIAKLDQAEEEKVDAAELVREFEALTEENRTLRLA
::::::::: ::::::::::::::::::::::::.:::::::::::::::::::::::::
NP_001 QHCQIAEEYHEVKKEITLLEQRKKELIAKLDQAEKEKVDAAELVREFEALTEENRTLRLA
70 80 90 100 110 120
130 140
pF1KB8 QSQCVEQLEKLRIQYQKRQGSS
::::::::::::::::::::::
NP_001 QSQCVEQLEKLRIQYQKRQGSS
130 140
>>NP_001273548 (OMIM: 611110) MAP3K7 C-terminal-like pro (142 aa)
initn: 902 init1: 902 opt: 902 Z-score: 786.0 bits: 151.3 E(85289): 4.8e-37
Smith-Waterman score: 902; 97.9% identity (99.3% similar) in 142 aa overlap (1-142:1-142)
10 20 30 40 50 60
pF1KB8 MISTARVPADKPVRIAFSLNDASDDTPPEDSIPLVFPELDQQLQPLPPCHDSEESMEVFR
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.
NP_001 MISTARVPADKPVRIAFSLNDASDDTPPEDSIPLVFPELDQQLQPLPPCHDSEESMEVFK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 QHCQIAEEYLEVKKEITLLEQRKKELIAKLDQAEEEKVDAAELVREFEALTEENRTLRLA
::::::::: ::::::::::::::::::::::::.:::::::::::::::::::::::::
NP_001 QHCQIAEEYHEVKKEITLLEQRKKELIAKLDQAEKEKVDAAELVREFEALTEENRTLRLA
70 80 90 100 110 120
130 140
pF1KB8 QSQCVEQLEKLRIQYQKRQGSS
::::::::::::::::::::::
NP_001 QSQCVEQLEKLRIQYQKRQGSS
130 140
>>NP_001273546 (OMIM: 611110) MAP3K7 C-terminal-like pro (142 aa)
initn: 902 init1: 902 opt: 902 Z-score: 786.0 bits: 151.3 E(85289): 4.8e-37
Smith-Waterman score: 902; 97.9% identity (99.3% similar) in 142 aa overlap (1-142:1-142)
10 20 30 40 50 60
pF1KB8 MISTARVPADKPVRIAFSLNDASDDTPPEDSIPLVFPELDQQLQPLPPCHDSEESMEVFR
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.
NP_001 MISTARVPADKPVRIAFSLNDASDDTPPEDSIPLVFPELDQQLQPLPPCHDSEESMEVFK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 QHCQIAEEYLEVKKEITLLEQRKKELIAKLDQAEEEKVDAAELVREFEALTEENRTLRLA
::::::::: ::::::::::::::::::::::::.:::::::::::::::::::::::::
NP_001 QHCQIAEEYHEVKKEITLLEQRKKELIAKLDQAEKEKVDAAELVREFEALTEENRTLRLA
70 80 90 100 110 120
130 140
pF1KB8 QSQCVEQLEKLRIQYQKRQGSS
::::::::::::::::::::::
NP_001 QSQCVEQLEKLRIQYQKRQGSS
130 140
>>NP_001273547 (OMIM: 611110) MAP3K7 C-terminal-like pro (142 aa)
initn: 902 init1: 902 opt: 902 Z-score: 786.0 bits: 151.3 E(85289): 4.8e-37
Smith-Waterman score: 902; 97.9% identity (99.3% similar) in 142 aa overlap (1-142:1-142)
10 20 30 40 50 60
pF1KB8 MISTARVPADKPVRIAFSLNDASDDTPPEDSIPLVFPELDQQLQPLPPCHDSEESMEVFR
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.
NP_001 MISTARVPADKPVRIAFSLNDASDDTPPEDSIPLVFPELDQQLQPLPPCHDSEESMEVFK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 QHCQIAEEYLEVKKEITLLEQRKKELIAKLDQAEEEKVDAAELVREFEALTEENRTLRLA
::::::::: ::::::::::::::::::::::::.:::::::::::::::::::::::::
NP_001 QHCQIAEEYHEVKKEITLLEQRKKELIAKLDQAEKEKVDAAELVREFEALTEENRTLRLA
70 80 90 100 110 120
130 140
pF1KB8 QSQCVEQLEKLRIQYQKRQGSS
::::::::::::::::::::::
NP_001 QSQCVEQLEKLRIQYQKRQGSS
130 140
>>NP_001273551 (OMIM: 611110) MAP3K7 C-terminal-like pro (136 aa)
initn: 772 init1: 760 opt: 768 Z-score: 672.7 bits: 130.3 E(85289): 9.9e-31
Smith-Waterman score: 768; 85.2% identity (90.1% similar) in 142 aa overlap (1-142:2-136)
10 20 30 40 50
pF1KB8 MISTARVPADKPVRIAFSLNDASDDTPPEDSIPLVFPELDQQLQPLPPCHDSEESMEVF
..:.. . ::: : ::::::::::::::::::::::::::::::::::::
NP_001 MLVSSSSLTPFPPVRTA-------DDTPPEDSIPLVFPELDQQLQPLPPCHDSEESMEVF
10 20 30 40 50
60 70 80 90 100 110
pF1KB8 RQHCQIAEEYLEVKKEITLLEQRKKELIAKLDQAEEEKVDAAELVREFEALTEENRTLRL
.::::::::: ::::::::::::::::::::::::.::::::::::::::::::::::::
NP_001 KQHCQIAEEYHEVKKEITLLEQRKKELIAKLDQAEKEKVDAAELVREFEALTEENRTLRL
60 70 80 90 100 110
120 130 140
pF1KB8 AQSQCVEQLEKLRIQYQKRQGSS
:::::::::::::::::::::::
NP_001 AQSQCVEQLEKLRIQYQKRQGSS
120 130
>>NP_001273563 (OMIM: 611110) MAP3K7 C-terminal-like pro (242 aa)
initn: 759 init1: 759 opt: 760 Z-score: 662.6 bits: 129.3 E(85289): 3.6e-30
Smith-Waterman score: 760; 91.6% identity (93.9% similar) in 131 aa overlap (12-142:115-242)
10 20 30 40
pF1KB8 MISTARVPADKPVRIAFSLNDASDDTPPEDSIPLVFPELDQ
::.: : ::::::::::::::::::
NP_001 SLAMLEDNPKVSKLATGDWMLTLKPKSITVPVEIPSS---PLDDTPPEDSIPLVFPELDQ
90 100 110 120 130 140
50 60 70 80 90 100
pF1KB8 QLQPLPPCHDSEESMEVFRQHCQIAEEYLEVKKEITLLEQRKKELIAKLDQAEEEKVDAA
::::::::::::::::::.::::::::: ::::::::::::::::::::::::.::::::
NP_001 QLQPLPPCHDSEESMEVFKQHCQIAEEYHEVKKEITLLEQRKKELIAKLDQAEKEKVDAA
150 160 170 180 190 200
110 120 130 140
pF1KB8 ELVREFEALTEENRTLRLAQSQCVEQLEKLRIQYQKRQGSS
:::::::::::::::::::::::::::::::::::::::::
NP_001 ELVREFEALTEENRTLRLAQSQCVEQLEKLRIQYQKRQGSS
210 220 230 240
>>NP_064537 (OMIM: 611110) MAP3K7 C-terminal-like protei (242 aa)
initn: 759 init1: 759 opt: 760 Z-score: 662.6 bits: 129.3 E(85289): 3.6e-30
Smith-Waterman score: 760; 91.6% identity (93.9% similar) in 131 aa overlap (12-142:115-242)
10 20 30 40
pF1KB8 MISTARVPADKPVRIAFSLNDASDDTPPEDSIPLVFPELDQ
::.: : ::::::::::::::::::
NP_064 SLAMLEDNPKVSKLATGDWMLTLKPKSITVPVEIPSS---PLDDTPPEDSIPLVFPELDQ
90 100 110 120 130 140
50 60 70 80 90 100
pF1KB8 QLQPLPPCHDSEESMEVFRQHCQIAEEYLEVKKEITLLEQRKKELIAKLDQAEEEKVDAA
::::::::::::::::::.::::::::: ::::::::::::::::::::::::.::::::
NP_064 QLQPLPPCHDSEESMEVFKQHCQIAEEYHEVKKEITLLEQRKKELIAKLDQAEKEKVDAA
150 160 170 180 190 200
110 120 130 140
pF1KB8 ELVREFEALTEENRTLRLAQSQCVEQLEKLRIQYQKRQGSS
:::::::::::::::::::::::::::::::::::::::::
NP_064 ELVREFEALTEENRTLRLAQSQCVEQLEKLRIQYQKRQGSS
210 220 230 240
>>NP_001273553 (OMIM: 611110) MAP3K7 C-terminal-like pro (87 aa)
initn: 523 init1: 523 opt: 523 Z-score: 467.6 bits: 91.7 E(85289): 2.6e-19
Smith-Waterman score: 523; 96.6% identity (98.9% similar) in 87 aa overlap (56-142:1-87)
30 40 50 60 70 80
pF1KB8 TPPEDSIPLVFPELDQQLQPLPPCHDSEESMEVFRQHCQIAEEYLEVKKEITLLEQRKKE
::::.::::::::: :::::::::::::::
NP_001 MEVFKQHCQIAEEYHEVKKEITLLEQRKKE
10 20 30
90 100 110 120 130 140
pF1KB8 LIAKLDQAEEEKVDAAELVREFEALTEENRTLRLAQSQCVEQLEKLRIQYQKRQGSS
:::::::::.:::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LIAKLDQAEKEKVDAAELVREFEALTEENRTLRLAQSQCVEQLEKLRIQYQKRQGSS
40 50 60 70 80
>>XP_016866715 (OMIM: 157800,602614,617137) PREDICTED: m (449 aa)
initn: 450 init1: 410 opt: 453 Z-score: 398.9 bits: 81.4 E(85289): 1.8e-15
Smith-Waterman score: 453; 46.9% identity (79.0% similar) in 143 aa overlap (1-142:307-449)
10 20
pF1KB8 MISTARVPADKPVRI-AFSLNDASDDTPPE
::.:. ..::.: .. .:..: . .
XP_016 QPRRRSIQDLTVTGTEPGQVSSRSSSPSVRMITTSGPTSEKPTRSHPWTPDDSTDTNGSD
280 290 300 310 320 330
30 40 50 60 70 80
pF1KB8 DSIPLVFPELDQQLQPLPPCHDSEESMEVFRQHCQIAEEYLEVKKEITLLEQRKKELIAK
.:::... ::.::::: :: .:.::: ::.:::..:.::..:. ::.:: :::.::.:.
XP_016 NSIPMAYLTLDHQLQPLAPCPNSKESMAVFEQHCKMAQEYMKVQTEIALLLQRKQELVAE
340 350 360 370 380 390
90 100 110 120 130 140
pF1KB8 LDQAEEEKVDAAELVREFEALTEENRTLRLAQSQCVEQLEKLRIQYQKRQGSS
::: :... ....::.: . : .::..: .:: .::: .: : :::::.:
XP_016 LDQDEKDQQNTSRLVQEHKKLLDENKSLSTYYQQCKKQLEVIRSQQQKRQGTS
400 410 420 430 440
>>XP_006715616 (OMIM: 157800,602614,617137) PREDICTED: m (476 aa)
initn: 450 init1: 410 opt: 453 Z-score: 398.6 bits: 81.4 E(85289): 1.8e-15
Smith-Waterman score: 453; 46.9% identity (79.0% similar) in 143 aa overlap (1-142:334-476)
10 20
pF1KB8 MISTARVPADKPVRI-AFSLNDASDDTPPE
::.:. ..::.: .. .:..: . .
XP_006 QPRRRSIQDLTVTGTEPGQVSSRSSSPSVRMITTSGPTSEKPTRSHPWTPDDSTDTNGSD
310 320 330 340 350 360
30 40 50 60 70 80
pF1KB8 DSIPLVFPELDQQLQPLPPCHDSEESMEVFRQHCQIAEEYLEVKKEITLLEQRKKELIAK
.:::... ::.::::: :: .:.::: ::.:::..:.::..:. ::.:: :::.::.:.
XP_006 NSIPMAYLTLDHQLQPLAPCPNSKESMAVFEQHCKMAQEYMKVQTEIALLLQRKQELVAE
370 380 390 400 410 420
90 100 110 120 130 140
pF1KB8 LDQAEEEKVDAAELVREFEALTEENRTLRLAQSQCVEQLEKLRIQYQKRQGSS
::: :... ....::.: . : .::..: .:: .::: .: : :::::.:
XP_006 LDQDEKDQQNTSRLVQEHKKLLDENKSLSTYYQQCKKQLEVIRSQQQKRQGTS
430 440 450 460 470
142 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 11:35:36 2016 done: Fri Nov 4 11:35:37 2016
Total Scan time: 5.180 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]