GENSCAN 1.0	Date run:  4-Nov-116	Time: 11:32:57

Sequence gi568815588r:101727356_101939840 : 212485 bp : 45.78% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   5629   5755  127  2  1  109   38    88 0.094   5.64
 1.02 Term +  22035  22086   52  0  1  115   39    36 0.009  -1.70
 1.03 PlyA +  24620  24625    6                               1.05

 2.05 PlyA -  26004  25999    6                               1.05
 2.04 Term -  32205  32078  128  1  2  100   53   127 0.987   8.84
 2.03 Intr -  32606  32392  215  1  2   59   77   115 0.865   5.86
 2.02 Intr -  39347  39223  125  2  2  106   90    80 0.625   9.38
 2.01 Init -  39648  39640    9  0  0   69   65     4 0.313  -3.43
 2.00 Prom -  39714  39675   40                              -9.26

 3.06 PlyA -  41120  41115    6                              -1.75
 3.05 Term -  43264  42974  291  1  0   90   43   720 0.999  63.04
 3.04 Intr -  44214  44108  107  1  2   58  100   167 0.857  14.83
 3.03 Intr -  47524  47377  148  1  1   55   99   333 0.814  30.91
 3.02 Intr -  48757  48514  244  0  1   38   76   171 0.356   8.40
 3.01 Init -  50149  50133   17  1  2   94   81    -3 0.539  -0.52
 3.00 Prom -  51986  51947   40                             -10.84

 4.23 PlyA -  53994  53989    6                               1.05
 4.22 Term -  54499  54381  119  2  2   73   41   155 0.992   8.00
 4.21 Intr -  54996  54903   94  0  1   87   77   103 0.999   8.64
 4.20 Intr -  55242  55123  120  0  0   58  101   169 0.994  15.89
 4.19 Intr -  55569  55484   86  1  2   59   77   146 0.972  10.14
 4.18 Intr -  56131  56026  106  1  1  101   41    54 0.494   1.79
 4.17 Intr -  63683  63541  143  0  2   76   75    76 0.451   5.17
 4.16 Intr -  70799  70625  175  2  1   49   82   104 0.881   5.41
 4.15 Intr -  72100  71487  614  2  2   96   87   539 0.916  46.70
 4.14 Intr -  73045  72887  159  2  0   81   73   128 0.867  10.56
 4.13 Intr -  76664  76380  285  0  0  103   80   180 0.981  16.01
 4.12 Intr -  78788  78690   99  0  0   87  111   -19 0.565   0.38
 4.11 Intr -  80546  80375  172  2  1  130   72    -3 0.991   1.82
 4.10 Intr -  82959  82829  131  1  2   42   93   100 0.967   6.31
 4.09 Intr -  90946  90469  478  1  1   65  105   120 0.005   4.02
 4.08 Intr - 100396 100334   63  1  0   71   87    53 0.727   2.41
 4.07 Intr - 100638 100534  105  0  0   63   80   125 0.993   9.61
 4.06 Intr - 100903 100796  108  1  0   92   46   154 0.999  12.08
 4.05 Intr - 101104 101034   71  2  2   58   83    99 0.738   5.30
 4.04 Intr - 101341 101272   70  1  1  123   78    67 0.932   7.95
 4.03 Intr - 101844 101720  125  1  2   98   92   221 0.999  23.80
 4.02 Intr - 103812 103672  141  1  0  110   28    65 0.792   3.02
 4.01 Init - 107014 106912  103  1  1  100   84   153 0.966  14.70
 4.00 Prom - 111855 111816   40                              -5.26

 5.03 PlyA - 112843 112838    6                               1.05
 5.02 Term - 113691 113516  176  1  2   63   48    69 0.427  -1.68
 5.01 Init - 116213 116141   73  2  1   93  100   134 0.995  16.33
 5.00 Prom - 120714 120675   40                              -9.16

 6.04 PlyA - 122115 122110    6                               1.05
 6.03 Term - 122271 122134  138  0  0   53   37   151 0.424   4.46
 6.02 Intr - 122537 122421  117  2  0  110  105   250 0.235  29.56
 6.01 Init - 127914 127912    3  0  0   98   53     0 0.101  -2.50
 6.00 Prom - 128568 128529   40                              -4.06

 7.00 Prom + 137066 137105   40                              -2.46
 7.01 Init + 140001 140201  201  2  0   95   46   155 0.785  10.88
 7.02 Term + 141241 141300   60  0  0  124   39    86 0.996   5.10
 7.03 PlyA + 142023 142028    6                               1.05

 8.06 PlyA - 144065 144060    6                               1.05
 8.05 Term - 153531 153368  164  1  2   48   43    94 0.133  -1.00
 8.04 Intr - 155755 155707   49  1  1   74   75    33 0.157  -1.15
 8.03 Intr - 162188 162057  132  2  0   58  115    59 0.141   6.44
 8.02 Intr - 200124 200038   87  0  0   17   96   119 0.789   5.77
 8.01 Init - 202633 202580   54  1  0   54  119    14 0.848   2.38

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815588r:101727356_101939840|GENSCAN_predicted_peptide_1|59_aa
XCVFRLRKKQIPPSSMKMQEAAVACSKHNVIVTGPHGPWCMERFSLTLMFFPLLHNKPF

>gi568815588r:101727356_101939840|GENSCAN_predicted_CDS_1|180_bp
ngctgtgtcttcaggcttaggaaaaagcagatacctcccagtagcatgaagatgcaagaa
gctgcagttgcctgtagcaaacacaacgtgattgtaacaggtccccatggcccttggtgc
atggaaaggttttccttgactctgatgtttttccccctgctgcacaacaagcccttctga

>gi568815588r:101727356_101939840|GENSCAN_predicted_peptide_2|158_aa
MARTLTSSHLNIPEKRMSVKGGGDFKQGDQEDLVDNFGSEHTPSGDYPNQKLPFGTKLPG
MKPELPLRGSQANWEVAGKGRENLQSTGSLREAVKPEDKRPASGLVLRSCHRLLQKAAST
YSNGLLEQSVMGPPAAMGACTRSAKGGQRRGIAMVTMY

>gi568815588r:101727356_101939840|GENSCAN_predicted_CDS_2|477_bp
atggctaggactctgacatccagccatctcaatattccagagaagaggatgagtgtgaag
ggtggtggcgattttaaacaaggtgatcaggaagaccttgtggataacttcgggtctgag
cacactccatcaggggattatcccaaccagaaacttccatttggaacaaagctcccagga
atgaaacccgagctgccactaagaggctcccaggctaactgggaagtggctgggaaaggg
agggaaaacttgcaaagcactgggagcctcagggaggctgtgaaacctgaagacaaacga
ccagccagcggactggtgctgcggagctgccaccgccttctgcagaaagctgcttccact
tactccaatgggctgctggagcagtcagtcatggggccgccagcagcaatgggggcctgc
acccgctcagccaagggagggcagaggagaggaatagccatggtgaccatgtactga

>gi568815588r:101727356_101939840|GENSCAN_predicted_peptide_3|268_aa
MGHRESQRPPAPAAAHSDSVRRGEHDVPRDPRSRVVIAAGLPHPHPLRSRPAQRVLPRRP
AGRRDPPGSRCPGAARHGQPPLRAELPHVREQSLVTDQLSRRLIRTYQLYSRTSGKHVQV
LANKRINAMAEDGDPFAKLIVETDTFGSRVRVRGAETGLYICMNKKGKLIAKSNGKGKDC
VFTEIVLENNYTALQNAKYEGWYMAFTRKGRPRKGSKTRQHQREVHFMKRLPRGHHTTEQ
SLRFEFLNYPPFTRSLRGSQRTWAPEPR

>gi568815588r:101727356_101939840|GENSCAN_predicted_CDS_3|807_bp
atggggcacagggaaagccagcggccaccggctccggcagcggcgcacagcgattcggtg
cggcgcggcgagcacgacgttccacgggacccgcggagccgcgtcgtgatcgccgccggc
ctcccgcacccgcaccctctccgctcgcgccctgctcagcgcgtcctcccgcggcggccc
gcgggacggcgtgacccgccgggctctcggtgccccggggccgcgcgccatgggcagccc
ccgctccgcgctgagctgcctcatgtgagggagcagagcctggtgacggatcagctcagc
cgccgcctcatccggacctaccaactctacagccgcaccagcgggaagcacgtgcaggtc
ctggccaacaagcgcatcaacgccatggcagaggacggcgaccccttcgcaaagctcatc
gtggagacggacacctttggaagcagagttcgagtccgaggagccgagacgggcctctac
atctgcatgaacaagaaggggaagctgatcgccaagagcaacggcaaaggcaaggactgc
gtcttcacggagattgtgctggagaacaactacacagcgctgcagaatgccaagtacgag
ggctggtacatggccttcacccgcaagggccggccccgcaagggctccaagacgcggcag
caccagcgtgaggtccacttcatgaagcggctgccccggggccaccacaccaccgagcag
agcctgcgcttcgagttcctcaactacccgcccttcacgcgcagcctgcgcggcagccag
aggacttgggcccccgagccccgatag

>gi568815588r:101727356_101939840|GENSCAN_predicted_peptide_4|1188_aa
MNLEGLEMVAVLVVLALFVKVLEQFGLFEPVSLEGHPPGPTKKALKQRFLKLLPCCGPQA
LPSVSESKCLSCASGGGARCVHSVDDEFELSTVCHRPEGLEQLQEQTKFTRKELQVLYRG
FKNECPSGIVNEENFKQIYSQFFPQGDSSTYATFLFNAFDTNHDGSVSFEDFVAGLSVIL
RGTVDDRLNWAFNLYDLNKDGCITKEEMLDIMKSIYDMMGKYTYPALREEAPREHVESFF
QKMDRNKDGVVTIEEFIESCQKGTRGHSLALRLGFWRPSLKPRLRLTKGSRRCRRPSHPG
IRVPAEREGEGQRGRGRSRRGAHLELKPSPGLRAGAPTDRGRGGPAEVAAAGGRRMVQKE
SQATLEERESELSSNPAASAGASLEPPAAPAPGEDNPAGAGGAAVAGAAGGARRFLCGVV
EEQLMTLISAAREYEIEFIYAISPGLDITFSNPKEVSTLKRKLDQVSQFGCRSFALLFDD
IDHNMCAADKEVFSSFAHAQVSITNEIYQYLGEPETFLFCPTEYCGTFCYPNVSQSPYLR
TVGEKLLPGIEVLWTGPKVVSKEIPVESIEEVSKIIKRAPVIWDNIHANDYDQKRLFLGP
YKGRSTELIPRLKGVLTNPNCEFEANYVAIHTLATWYKSNMNGVRKDVVMTDSEDSTVSI
QIKLENEGSDEDIETDVLYSPQMALKLALTEWLQEFGVPHQYSSRQVAHSGAKASVVDGT
PLVAAPSLNATTVVTTVYQEPIMSQGAALSGEPTTLTKEEEKKQPDEEPMDMVVEKQEET
DHKNDNQILSEIVEAKMAEELKPMDTDKESIAESKSPEMSMQEDCISDIAPMQTDEQTNK
EQFVPGPNEKPLYTAEPVTLEDLQLLADLFYLPYEHGPKGAQMLREFQWLRANSSVVSVN
CKGKDSEKIEEWRSRAAKFEEMCGLVMGMFTRLSNCANRTILYDMYSYVWDIKSIMSMVK
SFVQWLEDEDGICGYALGTVDVTPFIKKCKISWIPFMQEKYTKPNGDKELSEAEDCASPL
MGGAGTGRGSPALCVSGAEFEEGSYSMAAGCELSGHTRSFTFKVEEEDDAEHVLALTMLC
LTEGAKDECNVVEVVARNHDHQEIAVPVANLKLSCQPMLSLDDFQLQPPVTFRLKSGSGP
VRITGRHQIVTMSNDVSEEESEEEEEDSDEEEVELCPILPAKKQGGRP

>gi568815588r:101727356_101939840|GENSCAN_predicted_CDS_4|3567_bp
atgaacctggaagggctggagatggttgctgtgctcgtggtcctcgctctgtttgtcaag
gtcctggagcagtttggcctctttgagcctgtctccttggaaggccaccctccagggccc
actaaaaaagcgctgaagcagcgattcctcaagctgctgccgtgctgcgggccccaagcc
ctgccctcagtcagtgaaagcaagtgcctctcatgtgcttccgggggcggggctcgatgt
gtgcacagcgtggacgatgaatttgaattgtccaccgtgtgtcaccggcctgagggtctg
gagcagctgcaggagcaaaccaaattcacgcgcaaggagttgcaggtcctgtaccggggc
ttcaagaacgaatgtcccagcggaattgtcaatgaggagaacttcaagcagatttactcc
cagttctttcctcaaggagactccagcacctatgccacttttctcttcaatgcctttgac
accaaccatgatggctcggtcagttttgaggactttgtggctggtttgtccgtgattctt
cggggaactgtagatgacaggcttaattgggccttcaacctgtatgaccttaacaaggac
ggctgcatcaccaaggaggaaatgcttgacatcatgaagtccatctatgacatgatgggc
aagtacacgtaccctgcactccgggaggaggccccaagggaacacgtggagagcttcttc
cagaagatggacagaaacaaggatggtgtggtgaccattgaggaattcattgagtcttgt
caaaagggaacgagaggtcacagcctcgctctccgcttaggcttctggcgccccagctta
aagccgaggctgcggctgacaaagggctcgcgccggtgccgccgcccttctcatccgggc
attcgggtccctgcggagagggagggggaagggcagagggggaggggaaggagccggagg
ggcgcacacttggagctgaagccctctccagggctccgggccggtgccccaacggacaga
ggtcgaggaggacccgcagaggtggcagcggccgggggcaggaggatggtgcagaaggag
agtcaagcgacgttggaggagcgggagagcgagctcagctccaaccctgccgcctctgcg
ggggcatcgctggagccgccggcagctccggcacccggagaagacaaccccgccggggct
gggggagcggcggtggccggggctgcaggaggggctcggcggttcctctgcggtgtggtg
gaagagcaacttatgactctcatctctgctgcacgagaatatgagatagagttcatctat
gcgatctcacctggattggatatcactttttctaaccccaaggaagtatccacattgaaa
cgtaaattggaccaggtttctcagtttgggtgcagatcatttgctttgctttttgatgat
atagaccataatatgtgtgcagcagacaaagaggtattcagttcttttgctcatgcccaa
gtctccatcacaaatgaaatctatcagtacctaggagagccagaaactttcctcttctgt
cccacagaatactgtggcactttctgttatccaaatgtgtctcagtctccatatttaagg
actgtgggtgaaaagcttctacctggaattgaagtgctttggacaggtcccaaagttgtt
tctaaagaaattccagtagagtccatcgaagaggtttctaagattattaagagagctcca
gtaatctgggataacattcatgctaatgattatgatcagaagagactgtttctgggcccg
tacaaaggaagatccacagaactcatcccacggttaaaaggagtcctcactaatccaaat
tgtgaatttgaagccaactacgttgctatccacacccttgccacctggtacaaatcaaac
atgaatggagtgagaaaagatgtagtgatgactgacagtgaagatagtactgtgtccatc
cagataaaattagaaaatgaaggcagtgatgaagatattgaaactgatgtactctatagt
ccacagatggctctaaagctagcattaacagaatggttgcaagagtttggtgtgcctcat
caatacagcagtaggcaagttgcacacagtggagctaaagcaagtgtagttgatgggact
cctttagttgcagcaccctctttaaatgccacaaccgtagtaacaacagtttatcaggag
cccattatgagccagggagcagccttgagtggtgagcctactactctgaccaaggaagaa
gaaaagaaacagcctgatgaagaacccatggacatggtggtggaaaaacaagaagaaacg
gaccacaagaatgacaatcaaatactgagtgaaattgttgaagcgaaaatggcagaggaa
ttgaaaccaatggacactgataaagagagcatagctgaatcaaaatccccagagatgtcc
atgcaagaagattgtattagtgacattgcccccatgcaaactgatgaacagacaaacaag
gagcagtttgtgccaggtccaaatgaaaagcctttgtacactgcggaaccagtgaccctg
gaggatttgcagttacttgctgatctattctaccttccttacgagcatggacccaaagga
gcacagatgttacgggaatttcaatggcttcgagcaaatagtagtgttgtcagtgtcaat
tgcaaaggaaaagactctgaaaaaattgaagaatggcggtcacgagcagccaagtttgaa
gagatgtgtggactagtgatgggaatgttcactcggctctccaattgtgccaacaggaca
attctttatgacatgtactcctatgtttgggatatcaagagtataatgtctatggtgaag
tcttttgtacagtggttagaagatgaagatggcatatgtggttatgccttgggcactgta
gatgtgaccccctttattaaaaaatgtaaaatttcctggatccccttcatgcaggagaag
tataccaagccaaatggtgacaaggaactctctgaggctgaggactgtgcgtctccttta
atgggcggggccggaactggccgagggtccccggctttgtgcgtgtcgggggcggagttt
gaagaaggctcttacagcatggccgccggctgtgagctctccggccacacccgctccttc
acctttaaggtagaggaagaggatgatgcggagcacgtgctggcactaaccatgctctgc
ctcaccgagggagccaaagacgagtgtaatgtggtagaagttgtggcccggaaccatgac
catcaggagatcgcagtccctgtggccaacctcaagctgtcctgccaacccatgctcagt
ctggatgacttccagctccaaccacctgtaaccttccgcctgaagtcgggctctggccct
gtgcggatcactgggcggcaccagattgttacgatgagcaatgatgtttctgaggaggag
agcgaggaagaggaagaggacagtgatgaggaagaagttgagctgtgccccatccttcct
gccaaaaagcaggggggcaggccctag

>gi568815588r:101727356_101939840|GENSCAN_predicted_peptide_5|82_aa
MRGQGRKESLSDSRDLDGSYDQLTARRGRWAVRFRGERPRLAAALSERKRERPREDAERV
GAWLASPELGPPTGISVESLRP

>gi568815588r:101727356_101939840|GENSCAN_predicted_CDS_5|249_bp
atgcggggccagggccgcaaggagagtttgtccgattcccgagacctggacggctcctac
gaccagctcacggcccggcggggccgctgggcagtgcggttccgaggggaaaggccgcgt
ttagcagcggccctgtctgagcggaagagagaaaggccaagagaagatgcggagagggtt
ggagcctggctggctagccctgagctcggtcccccgactgggatctcagtggagtccctc
cggccctga

>gi568815588r:101727356_101939840|GENSCAN_predicted_peptide_6|85_aa
MVLEVVRANYDTLTLKLQDGLDQYERYSEQHKEAAFFKELAVREDAIRGSIAYFSFAAME
TALAQLQLGLGFDVCSQQQIWLIIP

>gi568815588r:101727356_101939840|GENSCAN_predicted_CDS_6|258_bp
atggtgctggaggtggtgagagccaactatgacacgctcacgctgaagctgcaggatggc
ctggaccagtatgagcgctactcagagcagcacaaggaagctgccttcttcaaagagctg
gcagtaagagaagatgctattcgaggtagtattgcctacttctcctttgcagccatggag
acagcccttgcacagctccagctgggcctggggtttgacgtgtgttcccagcagcagatc
tggctcattattccttaa

>gi568815588r:101727356_101939840|GENSCAN_predicted_peptide_7|86_aa
MGAPKMSLIQPPNQRVIKTFKAHYIWYSMQRTVNAVGENPIGENIMKIWKDYNTEDAITV
TEKAMGEPTQHEDDEEDLYDPLPLNE

>gi568815588r:101727356_101939840|GENSCAN_predicted_CDS_7|261_bp
atgggtgccccaaagatgtctctaattcagcctccaaatcagagggtcataaagaccttt
aaggctcattacatatggtactctatgcaaaggactgtcaatgctgtgggagaaaaccca
attggagagaatatcatgaaaatctggaaggattacaacactgaagatgccatcactgtt
acagaaaaagccatgggcgagcctactcaacatgaagatgatgaggaagatctttatgac
ccacttccacttaatgaatag

>gi568815588r:101727356_101939840|GENSCAN_predicted_peptide_8|161_aa
MLIGTICVSDFWIRDAQLTVTDEIAKNIGEEMDDWQFAAEYYSSWSQMYPPLLSGTILIR
ILCFRAIINHFNPKIESYAAVNHISQLSEEQEKDFDIISCIILEMHPQRIEALIRGEPQF
VGNNIVRGPGWHPLRENIQEKNRKILGKGPENTKTYEENGA

>gi568815588r:101727356_101939840|GENSCAN_predicted_CDS_8|486_bp
atgctcattggaacaatttgtgtttcagatttctggattagggatgctcaactgacagtt
acagatgaaattgccaagaacattggagaagaaatggatgattggcagtttgctgcagaa
tattatagctcttggtcccagatgtatccacctcttctatctggcaccatattaatacga
attctttgtttcagagccatcatcaaccactttaaccccaaaattgagtcctacgctgct
gtgaatcacatatcccaactgtcagaggagcaggaaaaagattttgatattatcagctgc
atcatattagaaatgcatccacaaaggatcgaagcactcataagaggagaaccccagttt
gtggggaacaacattgttaggggccctgggtggcatccattacgtgagaacatccaggag
aagaacagaaagatcttggggaaagggccagagaacacaaagacttatgaggaaaatgga
gcctga