GENSCAN 1.0	Date run:  4-Nov-116	Time: 11:28:43

Sequence gi568815586r:53611947_53825242 : 213296 bp : 45.74% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.02 PlyA -   1581   1576    6                               1.05
 1.01 Sngl -  21209  20832  378  2  0   79   44   340 0.999  24.86
 1.00 Prom -  40693  40654   40                              -3.26

 2.08 PlyA -  41251  41246    6                               1.05
 2.07 Term -  53482  53368  115  0  1   95   49   143 0.991   9.14
 2.06 Intr -  57395  57202  194  2  2   96  110    97 0.808  10.99
 2.05 Intr -  58002  57925   78  0  0   99   67    23 0.527   1.05
 2.04 Intr -  60685  60630   56  2  2   74   97    42 0.184   2.40
 2.03 Intr -  64295  64183  113  1  2   44   14   120 0.115   0.22
 2.02 Intr -  86393  86087  307  0  1   27  -82   629 0.129  35.31
 2.01 Init -  90493  90406   88  1  1   88   92    17 0.598   2.99
 2.00 Prom -  98144  98105   40                              -6.66

 3.15 PlyA -  99236  99231    6                               1.05
 3.14 Term - 100175  99998  178  1  1  103   39   130 0.971   6.76
 3.13 Intr - 101260 101154  107  1  2   59  109   123 0.915  10.51
 3.12 Intr - 101954 101755  200  0  2  109   97    88 0.883  10.87
 3.11 Intr - 102747 102615  133  0  1   76   94   183 0.637  17.92
 3.10 Intr - 103379 103254  126  2  0   87   81   148 0.999  14.88
 3.09 Intr - 104101 103847  255  1  0   30   65   212 0.938  10.74
 3.08 Intr - 104469 104314  156  0  0  101   89   169 0.998  18.51
 3.07 Intr - 107883 107793   91  2  1   67   94   110 0.999   9.50
 3.06 Intr - 109669 109521  149  1  2   24   94   229 0.995  16.13
 3.05 Intr - 110237 110079  159  2  0   95   81   213 0.998  21.48
 3.04 Intr - 111837 111647  191  1  2   72   94   263 0.985  24.60
 3.03 Intr - 112801 112699  103  1  1   96   82    51 0.706   5.05
 3.02 Intr - 113320 113141  180  1  0   72   65   154 0.837  11.56
 3.01 Init - 113525 113400  126  2  0   83   68    62 0.495   3.86
 3.00 Prom - 116057 116018   40                              -5.86

 4.05 PlyA - 116464 116459    6                               1.05
 4.04 Term - 127962 127756  207  0  0  118   48   155 0.939  11.84
 4.03 Intr - 128586 128542   45  0  0   87   88    52 0.793   3.71
 4.02 Intr - 131898 131802   97  2  1  103   11   115 0.710   5.31
 4.01 Init - 132713 132640   74  2  2   43   53    73 0.666  -0.16
 4.00 Prom - 133546 133507   40                              -4.06

 5.00 Prom + 138041 138080   40                              -4.46
 5.01 Init + 138239 138394  156  1  0   44   99    28 0.280  -0.59
 5.02 Intr + 144620 144679   60  1  0   94   92    63 0.584   6.23
 5.03 Term + 184247 184339   93  1  0  114   48   103 0.923   6.73
 5.04 PlyA + 184354 184359    6                               1.05

 6.03 PlyA - 185087 185082    6                               1.05
 6.02 Term - 187204 187112   93  1  0   77   44   119 0.623   4.23
 6.01 Init - 207894 207832   63  0  0   81  116     9 0.611   4.15
 6.00 Prom - 211880 211841   40                              -1.36


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586r:53611947_53825242|GENSCAN_predicted_peptide_1|125_aa
MARKEGWREEKGLFCHQQGGDREYTVNLHRCIHGVGFKKRSPWACKEIWKFAMKEMGTPD
VRIDTRLNKAVWAKGIRNVQDLIRMRLSRKHNEDEDSPNKLYTLVTNVPVTAFKNLQAMW
MRTNC

>gi568815586r:53611947_53825242|GENSCAN_predicted_CDS_1|378_bp
atggcccgcaaagaagggtggcgagaagaaaaagggctgttctgtcatcaacaaggtggt
gaccgagaatacaccgtcaaccttcacaggtgcatccacggagtgggcttcaagaagcgt
tccccttgggcatgcaaagagatctggaaatttgccatgaaggagatgggaactccagat
gtgcgcattgatactagactcaacaaagctgtctgggccaaaggaataaggaatgtccaa
gaccttatccgtatgcggttgtccagaaaacataatgaggatgaagattcaccaaataag
ctctatactttggttaccaatgtacccgttaccgctttcaaaaatctacaggcaatgtgg
atgagaactaactgctga

>gi568815586r:53611947_53825242|GENSCAN_predicted_peptide_2|316_aa
MRELQGLEGPKILRQMLTWTLRQERMVKTDWATERDSISKKKKEEEEKRKKKKEKKKKMR
RRRRKKKKEKKKKKKKKKKKKKKKKKKKKKKKEEEQEQEQEQEEQEEQEEEQEEDNRDED
RGLQPSSGIWRQWSNRPDTATALAGGAVMPELILYVAITLSVAERLVGPAPHPLKMFACS
KFVSTPSLVKSTSQLLSRPLSAVVLKRPEILTDESLSSLAVSCPLTSLVSSRSFQTSAIS
RDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEA
MGLFCLMVAFLILFAM

>gi568815586r:53611947_53825242|GENSCAN_predicted_CDS_2|951_bp
atgagggagctacagggccttgagggtccgaagatcctgagacagatgcttacatggacg
ttgagacaggaaagaatggtcaagacagactgggcgacagagcgagactccatctcaaaa
aaaaagaaggaggaggaggagaagaggaagaagaagaaggagaagaagaagaagatgagg
aggaggaggaggaagaagaagaaggagaagaagaagaagaagaagaagaagaagaagaag
aagaagaagaagaagaagaagaagaagaagaagaaggaagaagaacaagaacaagaacaa
gaacaagaagaacaagaagaacaagaagaagaacaagaagaagacaacagagatgaggac
aggggactccaaccatcctcgggcatctggaggcagtggagcaaccggccggataccgcc
acagccctggcaggcggcgctgtgatgcctgagctgatcctgtatgttgcaatcactcta
tccgtggctgagcgactcgttggcccggctcctcaccccctgaaaatgttcgcctgctcc
aagtttgtctccactccctccttggtcaagagcacctcacagctgctgagccgtccgcta
tctgcagtggtgctgaaacgaccggagatactgacagatgagagcctcagcagcttggca
gtctcatgtccccttacctcacttgtctctagccgcagcttccaaaccagcgccatttca
agggacatcgacacagcagccaagttcattggagctggggctgccacagttggggtggct
ggttctggggctgggattggaactgtgtttgggagcctcatcattggttatgccaggaac
ccttctctgaagcaacagctcttctcctacgccattctgggctttgccctctcggaggcc
atggggctcttttgtctgatggtagcctttctcatcctctttgccatgtga

>gi568815586r:53611947_53825242|GENSCAN_predicted_peptide_3|717_aa
MGTDLEGQTYVLETKSDTSKMSRNPQGLETRYALSPGVVAGAEDRYLKARMEESPLSRAP
SRGGVNFLNVARTYIPNTKVECHYTLPPGTMPSASDWIGIFKVEAACVRDYHTFVWSSVP
ESTTDGSPIHTSVQFQASYLPKPGAQLYQFRYVNRQGQVCGQSPPFQFREPRPMDELVTL
EEADGGSDILLVVPKATVLQNQLDESQQERNDLMQLKLQLEGQVTELRSRVQELERALAT
ARQEHTELMEQYKGISRSHGEITEERDILSRQQGDHVARILELEDDIQTISEKVLTKEVE
LDRLRDTVKALTREQEKLLGQLKEVQADKEQSEAELQVAQQENHHLNLDLKEAKSWQEEQ
SAQAQRLKDKVAQMKDTLGQAQQRVAELEPLKEQLRGAQELAASSQQKATLLGEELASAA
AARDRTIAELHRSRLEVAEVNGRLAELGLHLKEEKCQWSKERAGLLQSVEAEKDKILKLS
AEILRLEKAVQEERTQNQVFKTELAREKDSSLVQLSESKRELTELRSALRVLQKEKEQLQ
EEKQVSTHNPGPVDATGCPAALTDSEDESPEDMRLPPYGLCERGDPGSSPAGPREASPLV
VISQPAPISPHLSGPAEDSSSDSEAEDEKSVLMAAVQSGGEEANLLLPELGSAFYDMASG
FTVGTLSETSTGGPATPTWKECPICKERFPAESDKDALEDHMDGHFFFSTQDPFTFE

>gi568815586r:53611947_53825242|GENSCAN_predicted_CDS_3|2154_bp
atggggacggacttggaaggccagacctacgtcctagagactaagagtgatacctcaaaa
atgtcccgtaaccctcagggactagaaaccaggtatgccttatctccaggtgtagtggca
ggggctgaggacagatatctcaaggccaggatggaagaatcaccactaagccgggcacca
tcccgtggtggagtcaactttctcaatgtagcccggacctacatccccaacaccaaggtg
gaatgtcactacacccttcccccaggcaccatgcccagtgccagtgactggattggcatc
ttcaaggtggaggctgcctgtgttcgggattaccacacatttgtgtggtcttccgtgcct
gaaagtacaactgatggttcccccattcacaccagtgtccagttccaagccagctacctg
cccaaaccaggagctcagctctaccagttccgatatgtgaaccgccagggccaggtgtgt
gggcagagcccccctttccagttccgagagccaaggcccatggatgaactggtgaccctg
gaggaggctgatgggggctctgacatcctgctggttgtccccaaggcaactgtgttacag
aaccagctcgatgagagccagcaagaacggaatgacctgatgcagctgaagctacagctg
gagggacaggtgacagagctgaggagccgagtgcaggagctcgagagggctctggcaact
gccaggcaggagcacacggagctgatggaacagtacaaggggatttcccggtcccatggg
gagatcacagaagagagggacatcctgagccggcaacagggagaccatgtggcacgcatc
ctggagctagaggatgacatccagaccatcagtgagaaagtgctgacgaaggaagtggag
ctggacaggcttagagacacagtgaaggccctgactcgggaacaagagaagctccttggg
caactgaaagaagtacaagcagacaaggagcaaagtgaggctgagctccaagtggcacaa
caggagaaccatcacttaaatttggacctgaaggaggcgaagagctggcaagaggagcag
agtgctcaggctcagcgactgaaagacaaggtggcccagatgaaggacaccctaggccag
gcccagcagcgggtggccgagctggagcccttgaaggagcagcttcgaggggcccaggag
cttgcagcctcaagccagcagaaagccacccttcttggggaggagttggccagtgcagca
gcagccagggaccgcaccatagccgaactacaccgcagccgcctggaagtggctgaagtt
aacggcaggctggctgagctcggtttgcacttgaaggaagaaaaatgccaatggagcaag
gagcgggcagggctgctgcagagtgtggaggcagagaaggacaagatcctgaagctgagt
gcagagatacttcgattggagaaggcagttcaggaggagaggacccaaaaccaagtgttc
aagactgagctggcccgggagaaggattctagcctggtacagttgtcagaaagtaagcgg
gagctgacagagctgcggtcagccctgcgtgtgctccagaaggaaaaggagcagttacag
gaggagaaacaggtgagcacccataacccaggccccgtggatgccacaggctgcccggca
gctctgacagactcagaggacgagtccccagaagacatgaggctcccaccctatggcctt
tgtgagcgtggagacccaggctcctctcctgctgggcctcgagaggcttctccccttgtt
gtcatcagccagccggctcccatttctcctcacctctctgggccagctgaggacagtagc
tctgactcggaggctgaagatgagaagtcagtcctgatggcagctgtgcagagtgggggt
gaggaggccaacttactgcttcctgaactgggcagtgccttctatgacatggccagtggc
tttacagtgggtaccctgtcagaaaccagcactgggggccctgccacccccacatggaag
gagtgtcctatctgtaaggagcgctttcctgctgagagtgacaaggatgccctggaggac
cacatggatggacacttctttttcagcacccaggaccccttcacctttgagtga

>gi568815586r:53611947_53825242|GENSCAN_predicted_peptide_4|140_aa
MVGTQKFRFPPVPMNPGAQVERILQRSHFQRRDPNPAVLRICHKVAAKASIDPELDLISG
PLVQITEMEPAKVAFSVITFNAAGHGPNVRDGVLGPAHQMDDEVLIIPQGAVPRKVVINF
SELHQFRDILYGQTVRETVI

>gi568815586r:53611947_53825242|GENSCAN_predicted_CDS_4|423_bp
atggttggaactcagaagttccgctttcccccagtacctatgaatcctggagcccaagtg
gagagaattctccaaagatcccactttcagcgcagggaccccaatcctgcagttctccgt
atctgccacaaggtggcagccaaagcatcgattgatccagagctagacctgatctctgga
cctctggtccagatcacggaaatggagcctgcaaaggtcgcgttttccgtaataaccttt
aatgcggctggccacggcccaaatgttcgcgatggagtgctgggccccgcgcatcagatg
gacgatgaagtgttaatcatcccccagggagccgtcccgcggaaagtcgtcattaatttc
tctgaattacaccaattccgagacattctttatggacagacagtgcgggagacagttata
tga

>gi568815586r:53611947_53825242|GENSCAN_predicted_peptide_5|102_aa
MTRANSESKPVSSSGKAARSGGVREVCKEKPNRACNRLGEEQEYLWLMVLRQVSDEEMEA
LERAGNLLKVMYLLQGARELGVNDNLEKQPQPEDLRGSKEDG

>gi568815586r:53611947_53825242|GENSCAN_predicted_CDS_5|309_bp
atgactagggcaaattcagaatccaagccagttagttcatcagggaaggctgctaggagt
gggggagttagagaggtgtgcaaagagaaacccaacagggcatgcaatagattaggagaa
gagcaggagtacctctggctgatggtgctgaggcaggtttcagatgaggaaatggaggcc
ttggagagggcaggtaacctgctcaaggttatgtatctgctgcaaggagctagagagctt
ggagtgaatgacaatttggagaaacagccgcagcctgaagatctaagaggctctaaagaa
gatggataa

>gi568815586r:53611947_53825242|GENSCAN_predicted_peptide_6|51_aa
MALSKFVVLKAREKRTVSVVKPLTDIVKKLGDSDLSNTMAKESPGNSSTST

>gi568815586r:53611947_53825242|GENSCAN_predicted_CDS_6|156_bp
atggcactgtccaaatttgtggttttaaaagcaagggaaaagaggacagtctctgtggtt
aagcccctcacagatattgtgaaaaagcttggggacagcgacctgagcaacacaatggcc
aaggaaagcccaggaaattctagcacctccacatga