GENSCAN 1.0	Date run:  4-Nov-116	Time: 11:27:29

Sequence gi568815580r:5190861_5392205 : 201345 bp : 38.88% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   5452   5638  187  1  1   54   20   260 0.787  14.57
 1.02 Intr +   6466   6550   85  0  1   76   92    89 0.653   6.57
 1.03 Intr +   6802   6921  120  2  0   39   34   133 0.034   2.55
 1.04 Intr +  15597  15759  163  1  1   86   81    32 0.025   0.41
 1.05 Intr +  18876  19111  236  0  2  -13   95   145 0.033   1.51
 1.06 Intr +  21342  21447  106  1  1   73  102    14 0.695  -0.35
 1.07 Intr +  23375  23485  111  2  0   87  106    34 0.670   3.68
 1.08 Term +  28505  28640  136  2  1   88   41    70 0.399  -1.19
 1.09 PlyA +  29023  29028    6                               1.05

 2.07 PlyA -  29336  29331    6                               1.05
 2.06 Term -  41297  41041  257  0  2   14   38   186 0.516   0.96
 2.05 Intr -  42342  42259   84  1  0   82  100    91 0.825   8.57
 2.04 Intr -  46571  46454  118  2  1   64   74   126 0.942   7.92
 2.03 Intr -  47706  47559  148  2  1  -21   93   220 0.068  10.92
 2.02 Intr -  60331  60238   94  2  1  133   56    69 0.117   6.30
 2.01 Init -  60544  60514   31  1  1   86   46    39 0.503  -0.55
 2.00 Prom -  61686  61647   40                              -4.15

 3.00 Prom +  66304  66343   40                              -2.35
 3.01 Init +  68848  68858   11  0  2   88  110     5 0.619   2.85
 3.02 Intr +  69651  69865  215  0  2   34   64   145 0.671   4.14
 3.03 Term +  71408  71634  227  0  2   84   55   180 0.983  10.26
 3.04 PlyA +  73113  73118    6                               1.05

 4.04 PlyA -  79474  79469    6                               1.05
 4.03 Term -  80380  79944  437  2  2   17   32   279 0.522   9.66
 4.02 Intr -  80641  80509  133  1  1   52   55    70 0.045  -0.60
 4.01 Init -  97009  96917   93  1  0   45   70    98 0.557   4.13
 4.00 Prom -  98186  98147   40                              -3.95

 5.10 PlyA -  98977  98972    6                               1.05
 5.09 Term - 101344  99998 1347  1  0   96   44  1284 0.941 115.28
 5.08 Intr - 103141 103112   30  1  0   71  111    23 0.536   0.31
 5.07 Intr - 104020 103941   80  2  2   20   92    77 0.904  -0.35
 5.06 Intr - 104666 104476  191  1  2   40   61   113 0.910   2.11
 5.05 Intr - 105000 104792  209  0  2   39   54   149 0.647   3.55
 5.04 Intr - 106251 106213   39  0  0   14   88   104 0.028   0.50
 5.03 Intr - 107994 107806  189  0  0   78   28    87 0.015   0.56
 5.02 Intr - 132506 132434   73  1  1   66  102    29 0.001   0.59
 5.01 Init - 143914 142272 1643  1  2   94   53   553 0.657  44.01
 5.00 Prom - 147802 147763   40                              -6.95

 6.00 Prom + 158423 158462   40                              -3.55
 6.01 Init + 159254 159329   76  1  1   85   89    71 0.857   8.20
 6.02 Intr + 174025 174155  131  2  2   21   70   154 0.045   6.39
 6.03 Intr + 179275 179394  120  0  0    9  101    76 0.025   0.77
 6.04 Term + 185934 186188  255  2  0   77   43   135 0.689   2.50
 6.05 PlyA + 188499 188504    6                               1.05

 7.02 PlyA - 189503 189498    6                               1.05
 7.01 Sngl - 192887 192663  225  2  0  101   38   117 0.498   2.89

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr -  47865  47757  109  0  1   38   49   132 0.852   3.24
S.002 Term + 134305 134814  510  0  0   11   41   228 0.867   3.79
S.003 Term + 174025 174206  182  2  2   21   47   219 0.804   7.89


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815580r:5190861_5392205|GENSCAN_predicted_peptide_1|381_aa
XGADSNAHARTRRQAGQPQTNLTLRQLVATESSKGTKVLHRLLQKDTATSSGAAVAASVL
QPPLGDVHCCLGSKALPPLSRDEGRKSKREKGREQEEGHSDYGALEEGATIRFRSQVANP
ALKAPKLEGPQGKAQASFWKLSVLHAGLSVPPLSCKNPYVHVCVSSALDYNELLPSLLNY
EFLKESWRPRRAGGIIQSNPEDLRTRGANGEVLVQVPRPENQKCQCPKARVDECPSSNTE
HQCSLPLPFCFIGHSVDRMMPIHTGPSHNVWEFWEIQFKLRFGRDTAKPYHMTSQVENST
SWLPTESLCSALLPYVKITRDSITKHVIFCAACDSGGKMSVHTVMKEELLLPWIPESRAH
IPVLLTGLHVCKKQTSTVLSH

>gi568815580r:5190861_5392205|GENSCAN_predicted_CDS_1|1146_bp
nntggggcggactcaaatgcgcacgcacgcacacgccgccaagccggtcaaccgcagaca
aatctgactcttcgccaactagtagccacggagagcagcaaagggaccaaggtccttcac
cgcctgctccaaaaagacacggcaacctccagcggcgccgcagtagctgcctctgtgctg
cagcctccgctcggcgacgtacactgctgcttagggagcaaagcacttccaccgctttca
cgcgacgaaggtcggaagagcaagagagagaaaggaagagagcaagaggaaggacacagt
gactatggagcgctcgaggagggcgctactatcaggttccgctcccaggtggcaaatccg
gctctgaaagctcctaagcttgaaggtcctcaaggcaaggcccaggcctccttctggaag
ctttctgtgctccatgcagggttaagtgtccctcccctgtcttgcaagaatccctatgtt
catgtctgtgtgagtagtgcactggactataatgaactgctgccttccttactaaactat
gagttcctcaaggaaagctggaggcccaggagagctggtggtataattcagtccaaccct
gaagacctgagaaccaggggagccaatggtgaagtcttggtccaagttccaaggcctgag
aaccagaaatgccaatgtccaaaagcaagagtggatgaatgtcccagctcaaatacagaa
caccagtgttcccttcctctgcctttttgttttattgggcactcagtggaccggatgatg
cccatccacactggtccctcccacaacgtgtgggaattctgggagatacaattcaagttg
agatttggtagggacacagccaaaccatatcacatgacatcacaagtagaaaattctacg
agctggctgcctacagaaagcctgtgttctgctctgcttccctatgtgaaaattaccaga
gacagcataacaaagcatgtgattttctgtgctgcctgtgactctggtggcaagatgtca
gtgcacacagtgatgaaagaagagcttctgttaccctggatccctgaaagcagagcccat
atcccggtcttattgactggacttcacgtttgtaagaaacaaacatctaccgtgttgagc
cactaa

>gi568815580r:5190861_5392205|GENSCAN_predicted_peptide_2|243_aa
MTSVNNGLEGRKTMKGDEEKWKCTPNIPDWREKKHFPHPVYLRSPDTGDPARLFPTHDGE
DPLQRVHEAPVLSQDGALPLDVGDYELLRQPANQQLIQTLGPQSRWNNGRRLPECQVLQD
ELKLRVVGRLAPSSWKLLHHESQAEKEVNAQAETQKKKEKEFRRSIIKLIKEAPEGEVQL
KIIKNMIQDTKGKFISETDSINKKQSQVLEIKDTLREMQNAMESLSNQTEQAEENFRARR
QGF

>gi568815580r:5190861_5392205|GENSCAN_predicted_CDS_2|732_bp
atgaccagtgtgaacaatggactagaagggagaaagaccatgaaaggcgatgaagaaaaa
tggaaatgtacccccaatattcccgactggagagagaagaaacacttcccacatcctgtt
tatctccgctccccagacaccggggatccggcccgactgtttcctacccacgacggcgaa
gacccgctacagcgcgtccacgaagccccagtactgagccaggacggggctctccctctc
gatgtaggcgactacgaactgctccgccagccggcaaatcagcagcttatacagacattg
gggccacaaagccggtggaacaacgggagacggcttcctgagtgtcaggtcctccaagat
gagcttaaacttcgggtggtgggcaggctcgcgccatcttcttggaaacttctgcaccat
gagagccaagcagagaaagaagtgaatgcgcaggctgaaacgcaaaagaagaaagaaaaa
gaattcagaaggtcgattattaagctaattaaggaggcaccagagggtgaagtccaactt
aagataatcaaaaacatgatacaggatacgaaaggaaaattcatcagtgaaacagatagc
ataaataaaaaacaatcacaagttctggaaatcaaggacacacttagagaaatgcaaaat
gcaatggaaagtcttagcaatcaaactgaacaagcagaagaaaacttcagagctcgaaga
caaggcttttga

>gi568815580r:5190861_5392205|GENSCAN_predicted_peptide_3|150_aa
MATGQRIQNSCFEETQRNSDNIEKEFRIQSYKLNREIEITEKNQAEILKLKSVTGIPKIA
SESLNSRINQAEETIRHREDTQTCTGQPLTPKPTLPPVQLCTLSPTGPPTSCIASTNMVN
AHSEDGTPASASTLLKLPHLGPPSTVDSKP

>gi568815580r:5190861_5392205|GENSCAN_predicted_CDS_3|453_bp
atggccacaggacagagaattcaaaatagctgttttgaggaaactcaaagaaattcagat
aatatagagaaggaattcagaattcaatcatacaaactaaacagagagattgaaattact
gaaaagaatcaagcagaaattctgaagctgaaaagtgtaactggcataccgaagattgca
tcagagtctttaaatagcagaattaatcaagcagaagaaacaattaggcacagagaagac
acccagacctgcactggccagcccttgacccccaagccaacactacctccagtacaacta
tgcacactgtctccaacaggaccccccaccagctgcattgcctccaccaatatggtgaat
gcccatagtgaggatggaacccctgcatctgccagcactctgttgaagctgccacacctt
ggccctcccagcacagtggactccaaaccttga

>gi568815580r:5190861_5392205|GENSCAN_predicted_peptide_4|220_aa
MLPTCVEHHMRGTGLDPGDAKAEAVWSLAVRSRDLVPSVPAVPAMTKRGQDTAWAVASEG
GSPKPWQLPCGVEATVWKGNVESDPPHRVPTGAPPSRAMRRGPVSSRPQNGRSTDSLHRV
PGKAADTQCQPMKAAKRGAIPCKATGMEQPKTMGTHLLHQCDLDVRHGVKGDHFGALRFD
CPAGFQTRMGSAALLFWPISPIWNSYIYPVSVPPLYLRSN

>gi568815580r:5190861_5392205|GENSCAN_predicted_CDS_4|663_bp
atgttgcctacttgtgttgagcatcatatgcgaggcactgggctggaccctggagatgca
aaggcagaagcagtttggtccctggctgttagatctagggacttggtgccctctgtccca
gctgttccagccatgactaaaagaggccaagatacagcttgggctgttgcttcagagggt
ggaagccccaagccttggcagcttccatgtggtgttgaagctacagtgtggaagggaaat
gtggagtctgatcccccacacagagtccccactggggcaccacctagtagagctatgaga
agagggccagtgtcctccagaccccagaatggtagatccactgacagcttgcaccgtgtg
cctggaaaagctgcagacactcaatgccagcccatgaaagcagccaagaggggagctata
ccctgcaaagccacagggatggagcagcccaaaaccatgggaacccacctcttgcatcag
tgtgacctggatgtgagacatggagtcaaaggggatcattttggagctttaagatttgac
tgccctgctggatttcagactcgcatggggtctgcagcccttttgttttggccaatttct
cccatttggaacagctatatttacccagtgtctgtgcccccattgtatctaagaagtaac
taa

>gi568815580r:5190861_5392205|GENSCAN_predicted_peptide_5|1266_aa
MDFSCFAFLYLRHRKKFNQKREFCFPRRLYANSFQTLLEKWSRGTKAPRSSHGTCFHGNI
ILNGQKLEAFPLKTGTRQGCPLSPLLFNIVLEVLARAIRQEKEIKGIQLGKEEVKLSLFA
DDMIVYLENPIVSAQNLLKLISNFSKVSGYKINVQKSQAFLYTNNRQTESQIMGELPFTI
ASKRIKYLGIQLTRDVKDLFKENYKPLLKEIKEDTNKWKNIPCSWVGRINIVKMAILPKV
IYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRARIAKSILSQKNKAGGITLPDFKLYYKA
TVTKTAWYWYQNRDIDQWNRTEPSEIMPHIYNYLIFDKPEKNKQWGKDSLFNKWCRENWL
AICRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTLEENLGITIQDIGVGKDFMSKTPKA
MATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTTREKIFATYSSDKGLISRIYNELKQIY
KKKTNNPIKKWAKDMNRHFSKEDIYAAKKHTKKCSSSLAIREMQIKTTMRYHLTPVRMAI
IKKSGNNRCSASFHPLLKYPYRKGVKRELKSKAWLCSGFGLASFSGLFVIQGPKLKRGLW
PNHGRVVLDVTAEEEAQNKGCSQNLYSDPAHSHLLILNYAFRGNFACERARGTHGSVCAC
ARLQVSAGQGAEGAGAVRKAGAGAAGGWRGGPEDARSRRALGHQPAPGCAAAASGAARAS
AAEFMAAPARTAAVHRGGGGDGPNPARSAARRAPPLRAAGPAAPPTAAGGGGGRDPAHAL
PVASLQQGSRAAAIVGLPGAGEAAAAAYDMGLQDGVLPEFFISMSETIKYNDDDHKTLFL
KTLNEQRLEGEFCDIAIVVEDVKFRAHRCVLAACSTYFKKLFKKLEVDSSSVIEIDFLRS
DIFEEVLNYMYTAKISVKKEDVNLMMSSGQILGIRFLDKLCSQKRDVSSPDENNGQSKSK
YCLKINRPIGDAADTQDDDVEEIGDQDDSPSDDTVEGTPPSQEDGKSPTTTLRVQEAILK
ELGSEEVRKVNCYGQEVESMETPESKDLGSQTPQALTFNDGMSEVKDEQTPGWTTAASDM
KFEYLLYGHHREQIACQACGKTFSDEGRLRKHEKLHTADRPFVCEMCTKGFTTQAHLKEH
LKIHTGYKPYSCEVCGKSFIRAPDLKKHERVHSNERPFACHMCDKAFKHKSHLKDHERRH
RGEKPFVCGSCTKAFAKASDLKRHENNMHSERKQVTPSAIQSETEQLQAAAMAAEAEQQL
ETIACS

>gi568815580r:5190861_5392205|GENSCAN_predicted_CDS_5|3801_bp
atggacttttcctgctttgcttttctctacttgagacacagaaagaaattcaatcagaag
cgtgaattctgctttcccaggaggctctatgctaacagttttcaaactttacttgagaaa
tggtcccgaggaacaaaagcacctagaagcagtcatggcacgtgtttccatggcaatatc
atactgaatgggcaaaaactggaagcattccctttgaaaactggcacaagacagggatgc
cctctctcaccgctcctattcaacatagtgttggaagttctggccagggcaatcaggcag
gagaaggaaataaagggtattcaattaggaaaagaggaagtcaaattgtccctgtttgca
gacgacatgattgtttatctagaaaaccccatcgtctcagcccaaaatctccttaagctg
ataagcaacttcagcaaagtctcaggatacaaaatcaatgtacaaaaatcacaagcattc
ttatacaccaacaacagacaaacagagagccaaatcatgggtgaactcccattcacaatt
gcttcaaagagaataaaatacctaggaatccaacttacaagggatgtgaaggacctcttc
aaggagaactacaaaccactgctcaaggaaataaaagaggacacgaacaaatggaagaac
attccatgctcatgggtaggaagaatcaatatcgtgaaaatggccatactgcccaaggta
atttacagattcaatgccatccccatcaagctaccaatgactttcttcacagaattggaa
aaaactactttaaagttcatatggaaccaaaaaagagcccgcattgccaagtcaatccta
agccaaaagaacaaagctggaggcatcacactacctgacttcaaactatactacaaggct
acagtaaccaaaacagcatggtactggtaccaaaacagagatatagatcaatggaacaga
acagagccctcagaaataatgccgcatatctacaactatctgatctttgacaaacctgag
aaaaacaagcaatggggaaaggattccctatttaataaatggtgccgggaaaactggcta
gccatatgcagaaagctgaaactggatcccttccttacaccttatacaaaaatcaattca
agatggattaaagatttaaacgttagacctaaaaccataaaaaccctagaagaaaaccta
ggcattaccattcaggacataggcgtgggcaaggacttcatgtccaaaacaccaaaagca
atggcaacaaaagccaaaattgacaaatgggatctaattaaactaaagagcttctgcaca
gcaaaagaaactaccatcagagtgaacaggcaacctacaacacgggagaaaattttcgca
acctactcatctgacaaagggctaatatccagaatctacaatgaactcaaacaaatttac
aagaaaaaaacaaacaaccccatcaaaaagtgggcgaaggacatgaacagacacttctca
aaagaagacatttatgcagccaaaaaacacacgaagaaatgctcatcatcactggccatc
agagaaatgcaaatcaaaaccactatgagatatcatctcacaccagttagaatggcaatc
attaaaaagtcaggaaacaacaggtgctctgctagctttcatcctttgctgaagtatccc
tacagaaaaggagttaagagggagttgaagtcaaaggcttggctgtgctcaggttttggg
ttggcttcattctcaggtctgtttgtcattcaagggcccaagctgaagagggggttgtgg
cctaaccatggtcgtgttgtgctggacgtcacagcagaggaggaggcgcagaacaaaggc
tgctctcaaaacctctactcagacccggcccactctcatctgctgatattaaattacgcg
tttcggggaaacttcgcgtgtgagcgagcgcggggaacccacggcagtgtctgtgcctgt
gccaggctgcaggtaagcgcgggccagggtgcggaaggggctggggccgtccgcaaggcg
ggcgcgggggcggccggcggctggcggggcggcccggaagacgcgcgttctcgccgagct
ctggggcaccagccagctccaggatgtgcggcggccgccagcggcgcggcgcgagcctcg
gcggccgagttcatggccgcccccgctcgcaccgccgcagtgcaccgcggtgggggtggg
gacggcccgaacccagcgcggagcgcggcccgccgggcgccgcccctccgagccgcgggc
cccgccgcgccgcctacagccgccggcggaggagggggccgggacccagcgcacgcactc
ccggttgcaagcttgcaacaaggaagtcgtgcagccgccattgtcgggctgcccggggca
ggggaggcggctgcagctgcttatgatatgggtctgcaggatggagttcttccggagttt
ttcatcagtatgtctgaaaccattaaatataatgacgatgatcataaaactctgtttctg
aaaacactaaatgaacaacgcctggaaggagaattttgtgatattgctattgtggttgag
gatgtgaaattcagagcacacagatgtgttcttgctgcctgcagcacttactttaaaaag
cttttcaagaagcttgaggttgatagttcttcggtcatagaaatagattttcttcgttct
gatatatttgaagaggtcctgaactacatgtacacagcaaagatttccgtgaaaaaagaa
gatgttaacttaatgatgtcatcgggtcagattcttggtatccgatttttggataaactg
tgttctcagaagcgtgatgtgtccagtcccgatgaaaacaatggtcagtccaaaagtaag
tattgccttaaaataaatcgccccattggagatgctgctgacacccaggatgatgatgta
gaggaaatcggggatcaggatgacagtccttctgatgacacagtagaaggcacacccccg
agtcaggaggacggcaagtcgcccaccacaacgctcagggttcaggaagcgatcctgaaa
gagctggggagtgaggaagttcggaaggtcaattgctacggccaggaagtagaatccatg
gagaccccagaatcaaaagacttggggtcccagacccctcaagccttaacatttaatgat
gggatgagtgaagtgaaagatgaacagacaccaggctggacaacagccgccagtgacatg
aagtttgagtatttgctttatggtcaccatcgggagcagattgcctgccaggcgtgtggg
aagacgttttctgatgaaggcagattgaggaagcatgagaaactccacacggcggacagg
ccatttgtttgtgaaatgtgcacaaaaggtttcaccacacaggcccacctgaaagaacac
ctaaaaatccacacaggatataagccctatagctgtgaggtgtgtggaaaatcatttatc
cgtgccccagacttaaagaagcatgagagagttcacagtaatgaaagaccgtttgcgtgc
cacatgtgtgacaaagccttcaaacacaagtctcacctcaaggatcatgaaagaagacac
agaggggaaaagccttttgtgtgtggctcctgcaccaaggcatttgccaaggcatctgat
ctgaaaaggcacgagaacaatatgcacagtgaaaggaagcaggttacccccagtgccatc
cagagcgagacagaacagttgcaggcggcagcgatggctgcggaagcagaacagcagctg
gagacgatagcctgtagctag

>gi568815580r:5190861_5392205|GENSCAN_predicted_peptide_6|193_aa
MDEAGSHYPKRTNTGTENQIPHVLTLYSVLYLRGGKDEKDTISGAKELVISGDKALWDTE
KEDLSWCLKCSHMHSLYVNSNALTIVLAFAQKLTRGKGIWKLDIHRAENGLSELSPTSGA
AFIQQSRLIEKVTTNHKQGEFESQLYETADLGWNVGSTFSFSWEAASSVSFWSPNALYHL
AAQHSWTTPLKST

>gi568815580r:5190861_5392205|GENSCAN_predicted_CDS_6|582_bp
atggatgaagctggaagccattatcctaagcgaactaacacaggaacggaaaaccagata
ccacatgttctcactttgtatagtgtactgtatctccgaggaggcaaagatgagaaagat
accatctctggtgccaaggagcttgtcatctcaggagacaaggcactgtgggacacggag
aaggaggacttgtcttggtgtctgaagtgtagccacatgcacagcctctatgttaatagc
aatgctctgacaatagtgctggcctttgctcagaagctcaccagaggaaagggtatttgg
aagttagacattcacagggcagagaatggattatcagagttgagccccacatctggagca
gcattcatccagcagtcgaggctaattgaaaaagtcaccacaaatcataagcagggggaa
tttgaaagtcagctttatgaaacagcagacttgggttggaatgtaggcagcaccttctca
tttagttgggaggcagctagctcagtgtccttctggtccccaaatgccttgtatcatttg
gctgctcaacattcgtggacaactcctctgaaatcaacctag

>gi568815580r:5190861_5392205|GENSCAN_predicted_peptide_7|74_aa
MALKKQTKTIDSEGSNPVLCHLLALIPQANYLDTLSLSLPAVIKGSTASYTGGCSCDETL
QPYEKVYEQVGHSS

>gi568815580r:5190861_5392205|GENSCAN_predicted_CDS_7|225_bp
atggccttaaaaaagcaaacaaaaaccatagactctgaaggcagcaatcctgtgctttgc
cacttactagctctgatacctcaggccaattatctagacactctgagcctcagtttaccc
gcagttataaagggaagcacagccagctacacaggtggttgtagttgtgatgaaaccctt
cagccatatgagaaagtatatgagcaagtaggacattcttcgtaa