GENSCAN 1.0	Date run:  4-Nov-116	Time: 11:26:50

Sequence gi568815587f:125251306_125531389 : 280084 bp : 47.25% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   3315   3390   76  1  1   72  109    49 0.472   3.97
 1.02 Intr +   3449   3500   52  2  1  115   68    34 0.196   3.01
 1.03 Intr +  12016  12208  193  0  1   89   68    89 0.280   6.07
 1.04 Term +  17711  17808   98  0  2   93   48    44 0.164  -0.97
 1.05 PlyA +  17811  17816    6                               1.05

 2.14 PlyA -  18023  18018    6                               1.05
 2.13 Term -  21638  21572   67  1  1  107   47   113 0.988   6.51
 2.12 Intr -  22696  22576  121  2  1   66   32   138 0.617   5.55
 2.11 Intr -  27062  26960  103  2  1  100   57    54 0.006   3.25
 2.10 Intr -  48553  48433  121  0  1   72   94    30 0.200   2.50
 2.09 Intr -  57349  57069  281  1  2   61   59   172 0.703   7.88
 2.08 Intr -  61173  61120   54  0  0   45   81    96 0.700   3.78
 2.07 Intr -  61491  61379  113  1  2   49   90    49 0.574   1.30
 2.06 Intr -  62723  62624  100  2  1   62  115    -4 0.596  -0.62
 2.05 Intr -  63037  62869  169  0  1   75   67    92 0.102   5.75
 2.04 Intr -  68170  68091   80  1  2   82   78    28 0.028  -0.45
 2.03 Intr -  68518  68410  109  0  1  120  115   -22 0.027   3.99
 2.02 Intr -  77005  76879  127  2  1  146   32    36 0.129   3.54
 2.01 Init -  79723  79624  100  1  1   90   84    55 0.885   3.83
 2.00 Prom -  84731  84692   40                              -5.46

 3.00 Prom +  85308  85347   40                              -8.26
 3.01 Sngl +  85867  86055  189  0  0   78   33   194 0.431   8.01
 3.02 PlyA +  86081  86086    6                               1.05

 4.00 Prom +  88890  88929   40                              -6.06
 4.01 Init +  90543  90630   88  2  1   94   65    52 0.702   4.24
 4.02 Intr + 100023 100087   65  1  2   54  109    69 0.029   4.04
 4.03 Intr + 111652 111804  153  0  0  108  -20    91 0.198   0.57
 4.04 Intr + 115595 115702  108  1  0   -3   26   154 0.553   0.58
 4.05 Intr + 116541 116680  140  2  2  153   91   117 0.953  17.76
 4.06 Intr + 134246 134417  172  2  1   79   63   308 0.995  27.35
 4.07 Intr + 146569 146757  189  0  0  128   92   253 0.997  29.48
 4.08 Intr + 158891 159020  130  1  1   73   67    99 0.863   6.57
 4.09 Intr + 159474 159571   98  1  2   84  109    34 0.973   4.83
 4.10 Intr + 160381 160560  180  0  0   50  101   102 0.777   7.76
 4.11 Intr + 162137 162256  120  1  0   39   52    89 0.055   1.09
 4.12 Intr + 177707 177783   77  1  2   89  105    85 0.595   8.61
 4.13 Intr + 178658 178836  179  2  2   91   95   214 0.991  21.96
 4.14 Term + 179861 180087  227  0  2  138   38   484 0.995  45.34
 4.15 PlyA + 186146 186151    6                               1.05

 5.10 PlyA - 186453 186448    6                               1.05
 5.09 Term - 188732 188653   80  0  2   26   45   111 0.066  -1.47
 5.08 Intr - 197262 197197   66  1  0   83  116    84 0.784   9.58
 5.07 Intr - 201104 201029   76  2  1   99   79   106 0.999   9.89
 5.06 Intr - 202905 202825   81  0  0  112  101   131 0.997  16.63
 5.05 Intr - 204801 204530  272  1  2   62  100   458 0.792  41.66
 5.04 Intr - 209361 209193  169  0  1   76  100   242 0.992  23.72
 5.03 Intr - 212265 212179   87  0  0   83   75   159 0.950  14.27
 5.02 Intr - 230328 230229  100  2  1  103   67   123 0.417  11.81
 5.01 Init - 238472 238162  311  2  2   85   46   508 0.365  43.09
 5.00 Prom - 240824 240785   40                              -7.06

 6.03 PlyA - 241081 241076    6                               1.05
 6.02 Term - 244282 244028  255  1  0  102   48    79 0.650   0.89
 6.01 Init - 245082 244816  267  0  0   70   55   215 0.921  11.38
 6.00 Prom - 246865 246826   40                              -4.76

 7.03 PlyA - 247704 247699    6                               1.05
 7.02 Term - 268176 268015  162  0  0   78   38   108 0.804   2.74
 7.01 Init - 278683 278597   87  1  0   70   93    74 0.528   6.74

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  23384  23300   85  2  1   88   33   118 0.826   5.28
S.002 Init - 214443 214438    6  0  0  108   59     0 0.804  -0.03


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587f:125251306_125531389|GENSCAN_predicted_peptide_1|139_aa
XCVGDHNRIVTLPVIRAGSKLSPRCRAEPCSHLTFCNIDDGVQQWGKPHEEERRGSKWRG
SAGGPSLGKQQGLLATAPAPTPAVTAAVQLLASLLGERAKPLRGQHCDAAKGGPWNSDHK
VSHGRKKDERDGNSCKFLI

>gi568815587f:125251306_125531389|GENSCAN_predicted_CDS_1|420_bp
ngttgtgtaggggatcacaaccgcattgtgacactacctgtcatccgagctgggtcaaag
ctgagccccaggtgcagagctgagccctgttcccacctcaccttctgtaacattgatgac
ggtgtccagcagtgggggaagccgcatgaggaggagcggcgtgggagcaaatggagggga
tctgctggcgggcctagtttaggcaaacagcagggactgctggcgacggctccagccccc
actcccgcggtaacagctgcagtccagctgctggcatccctgctgggggagcgtgctaaa
cctctccggggtcagcactgtgatgctgccaaaggtggtccctggaacagtgaccacaaa
gtgtctcatgggaggaagaaggatgaaagagatgggaattcttgtaaatttttaatctga

>gi568815587f:125251306_125531389|GENSCAN_predicted_peptide_2|514_aa
MAGSGEGAALRPGRHFQSSIGRTAGQEGLPYARGVYSLVGKIEGKEIIATYNVCVMLLLT
VSLQIPQWPEQGSGPGAFAQATHVPGRCSFSCFAFTSQLKSHFLRGATVTSQILHFLQIE
GSWQHRIEQVYQYNFSNSRTQSRSKLAMVTLRASDVAVRAPHCRCSEITEIPQVPLFGDS
RRADHDTNPKFSNWKYNNGQCLLGVTCVPGIVPSALHTELTGLHSILCVISASVLPSPEH
TCMVLLSPLNWHYGHVRLLHSMELLEQGDFPQNLVLSVNSDGFELLVIMKLLSGEDISDW
GKASPESCEHIVEVAISFAGVINLALHSGELLLGEIMVAMTCGIWKRASIFSCASPDMSG
GMQLPLSLPQSMSRTEQSFWEAPRSLLAQNRGSGKQSSPVGGCEGIQPYPQRSPSPNRGK
PRLPYEDLFPQKPFLLGTALSLMSHILQKWEMGSYVFGPSLASLTISKKILILLVPAHMT
IRVHVSRKISFQRPFSLRFGQTRQSVLNAASVTA

>gi568815587f:125251306_125531389|GENSCAN_predicted_CDS_2|1545_bp
atggcagggtcgggggagggggctgctctgaggcctgggcggcactttcagagcagcatc
gggagaaccgctggccaggagggcctgccctacgccagaggtgtttacagtctagtgggc
aaaatagaaggtaaagaaataattgccacctacaatgtgtgtgtgatgctgcttctgact
gtcagcctccagatcccacaatggccagagcagggctcagggccaggggcctttgcacaa
gctacccatgttcctggaaggtgctctttctcctgctttgctttcacatctcaactcaag
agtcacttcctcaggggagctacagtgacctctcagatattgcattttttacaaattgaa
ggttcatggcaacaccgcattgagcaagtttatcagtacaatttttccaacagcaggacc
cagagcagatccaaactggccatggtgacgttgcgagcaagtgatgtcgcagtgagggca
ccgcactgcaggtgctctgagatcactgaaatcccccaggtgcctctctttggtgattca
cgacgagctgaccatgacaccaaccccaaattctccaactggaagtataataatggccag
tgcttactgggggtcacttgtgtgcctggcattgtgcccagtgctttacacacagaactc
acagggctgcactccatcctgtgcgtaatttctgcctctgtgctcccatcacctgagcac
acctgtatggtgctgctgagcccgctgaattggcattatgggcacgtgcgtctcctccat
tccatggagctcctcgagcagggtgacttcccacagaacctggtgctcagcgtgaactca
gacggctttgaactcttggttattatgaaactcctgagtggggaagatatttctgattgg
ggcaaagcctcccccgagtcctgtgaacacattgtggaggtcgccatctcctttgctggt
gtaataaatctggccctgcattccggggagctgctcttgggagagatcatggtggccatg
acatgtggcatttggaaaagagccagcatcttctcttgtgcttctcctgacatgtctgga
ggaatgcagctcccgctgagtcttccccagagcatgagcaggactgagcagagcttttgg
gaagccccacggtcgcttctggctcagaaccgaggctcaggaaagcagagcagcccggtg
gggggatgcgaggggatccagccatatccccaacgctcaccctctccaaatcgggggaaa
cccagacttccctacgaggacctgtttcctcagaagccctttctgttggggacagctttg
tctcttatgtctcatatacttcagaagtgggagatgggaagctacgtctttggccccagc
ctggcctcactcacaatatccaagaagatcctgattctgctggttcctgctcacatgacc
atccgtgtccatgtgtctcggaagataagcttccaaaggccattctccctgcgcttcggc
cagacccgacagtcagtgctcaatgctgcttctgtcactgcctga

>gi568815587f:125251306_125531389|GENSCAN_predicted_peptide_3|62_aa
MAIYSTTELSSVNGLWKGRYNVAAVEEPSEPCGVMTGALSSHSFLFSVLRLFGFLRLLGY
NL

>gi568815587f:125251306_125531389|GENSCAN_predicted_CDS_3|189_bp
atggcaatatattcaaccacagaactaagcagtgtgaatggcctgtggaagggtcgttac
aacgtggctgctgtggaagaaccttctgagccctgtggtgtcatgactggtgccctgagc
agccactctttcttgttcagtgttctccgcctcttcggatttcttcgtttgctgggctac
aacctctag

>gi568815587f:125251306_125531389|GENSCAN_predicted_peptide_4|641_aa
MAVIFPSPGLAFLKLRNTEPVYPPSFQGGAPALTMMATQNVPPPPYQDSPQNGKRRNLQT
KNLGRVSLAASLRQNWFWLDGRQKSSGYSIYERDVHGGDGPRLEAGDEGVTKASEEKTDK
YMKPNTTCGESYHRAMDRMTATAQPPSKAQAVHISAPSAAASTPVPSAPIDPQAQLEADK
RAVYRHPLFPLLTLLFEKCEQATQGSECITSASFDVDIENFVHQQEQEHKPFFSDDPELD
NLMVKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLLRNDLGGPYSPNQPSI
NLHSQDLLQNSPNSMSGVSNNPQGIVVPASALQQGNIAMTTVNSQVVSGGALYQPVTMVT
SQGQVVTQAIPQGAIQIQNTQVPSRCPHRLLMLIFSPRALKVNLDLTSLLDNEDKKSKNK
RGVLPKHATNIMRSWLFQHLMLPAYLWEEGCIFCALTWHNQNESTTRSQLLVELSLAALI
VHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPMLDASNPDPAPKAKKIKSQHRP
TQRFWPNSIAAGVLQQQGGAPGTNPDGSINLDNLQSLSSDSATMAMQQAMMAAHDDSLDG
TEEEDEDEMEEEEEEELEEEVDELQTTNVSDLGLEHSDSLE

>gi568815587f:125251306_125531389|GENSCAN_predicted_CDS_4|1926_bp
atggctgtcatcttcccttccccagggctggctttcctgaagctcaggaacacagagcca
gtgtacccgccctccttccaagggggtgcccccgctctgacgatgatggccacgcagaat
gtcccgcccccaccctaccaggacagcccacagaatgggaaaagaaggaaccttcaaacc
aagaatctgggcagggtttccttagctgcgagcttaaggcagaactggttctggctagat
ggcagacagaagtccagtggctatagcatctacgagagggacgtgcatggaggtgatggc
cccaggttggaagctggtgatgaaggagtgaccaaggcctcagaggagaagacagataag
tacatgaagcccaacaccacatgtggggagagctaccatcgtgctatggacaggatgacg
gcaaccgcccagccaccctccaaggcccaggctgtccacatctctgccccctcagctgct
gccagcacacctgtgcccagtgcccccatcgacccccaggcccagctggaggctgacaag
cgagctgtatacaggcaccctcttttcccgctcctgacgctgctgtttgagaaatgtgaa
caggccacccagggctctgagtgcatcacctccgccagctttgatgtggacatcgagaac
tttgtccaccagcaggaacaggagcacaaacccttcttcagcgatgacccagaactggac
aatctgatggtgaaggcaatccaggtcctgagaatccacctgctggagctggagaaagtc
aatgaactctgcaaggacttttgtaaccgttacatcacctgcctcaaaaccaagatgcac
agcgacaacctgctcaggaatgatctaggggggccctactcccccaaccagccctccatc
aaccttcactcacaggacctcctgcagaattcccccaattccatgtccggagtctccaat
aacccccaggggattgtggtcccagcctcagcgctccagcagggcaacatcgccatgaca
accgtcaactcacaagttgtgtcaggtggagccttataccaaccggttaccatggtaacc
tcccagggtcaggtggtcacccaagcaatcccccagggagccatccagatccagaacaca
caggtccccagccgctgccctcacaggctgctgatgctgattttctctccacgtgccctg
aaggttaaccttgacctcacctccctcctggacaatgaggataagaagtccaagaacaaa
cgaggagtcttgcccaagcatgccaccaatataatgcgttcttggctcttccagcatctc
atgctcccagcctacctgtgggaggaaggatgcatcttctgtgcactgacctggcacaac
caaaatgaaagcaccacccgctcccaactgctcgtggagctaagtctggctgcgctcatt
gtgcacccctaccccacggaggatgagaagaggcagatcgcagcccagaccaacctcacc
ctcctgcaagtaaacaactggttcatcaatgcccggaggcgcatcctgcagcccatgctt
gatgccagcaacccagatcctgcccccaaagccaagaagatcaagtctcagcaccggccc
acccaaagattctggcccaactccatcgctgcgggggtgctgcagcagcagggcggtgcc
ccagggacaaaccccgatggttccatcaacttggacaacctgcagtccctgtcctcagac
agtgccaccatggccatgcagcaggctatgatggctgcacacgatgactcattggatggg
acagaagaagaggatgaggatgagatggaagaggaggaggaggaggagctggaggaggag
gtcgacgagctgcagacgacaaatgtcagcgacctgggcttggaacacagtgactccctg
gagtag

>gi568815587f:125251306_125531389|GENSCAN_predicted_peptide_5|413_aa
MEAPLVSLDEEFEDLRPSCSEDPEEKPQCFYGSSPHHLEDPSLSELENFSSEIISFKSME
DLVNEFDEKLNVCFRNYNAKTENLAPVKNQLQIQEEEETLQDEEVWDALTDNYIPSLSED
WRDPNIEALNGNCSDTEIHEKEEEEFNEKSENDSGINEEPLLTADQVIEEIEEMMQNSPD
PEEEEEVLEEEDGGETSSQADSVLLQEMQALTQTFNNNWSYEGLRHMSGSELTELLDQVE
GAIRDFSEELVQQLARRDELEFEKEVKNSFITVLIEVQNKQKEQRELMKKRRKEKGLSLQ
SSRIEKGNQMPLKRFSMEGISNILQSGIRQTFGSSGTDKQYLNTVIPYEKKASPPSVEDL
QMLTNILFAMKEDNEKVPTLLTDYILKVVAQGALVLADSGTSGLQVHLDKKTK

>gi568815587f:125251306_125531389|GENSCAN_predicted_CDS_5|1242_bp
atggaggccccactggtgagtctggatgaagagtttgaggaccttcgaccctcctgctcg
gaggacccggaggagaagccccagtgtttctatggttcatctccccaccatctcgaggac
ccctccctctccgagcttgagaatttttcttccgaaataatcagcttcaagtccatggag
gacctcgtaaatgaatttgatgagaagctcaatgtctgctttcggaactacaacgccaag
accgagaacctagctcccgtgaagaaccagttacagatccaagaggaggaggagaccctt
caggacgaggaggtttgggatgctctgacagacaattacatcccttcactctcagaagac
tggagggatccaaacatcgaggctctgaatggcaactgctctgacactgagatccatgag
aaagaagaggaagagttcaatgagaagagtgaaaatgattccggtatcaacgaggagcct
ctgctcacagcagatcaggtaattgaggagattgaggaaatgatgcagaactccccagac
cctgaggaagaagaggaggttctggaagaagaggatggaggagaaacttcctcccaggca
gactcggtcctcctgcaggagatgcaggcattgacacagaccttcaacaacaactggtcc
tatgaagggctgaggcacatgtctgggtctgagctgaccgagctgctggaccaggtggag
ggtgccatccgtgacttctcggaggagctggtgcagcagctggcccgccgggacgagctg
gagtttgagaaggaagtgaagaactcctttatcacggtgcttattgaggttcagaacaag
cagaaggagcagcgagaactgatgaaaaagaggcggaaagagaaagggctgagcctgcag
agcagccggatagagaagggaaaccagatgcctctcaagcgcttcagcatggaaggcatc
tccaacattctgcagagtggcatccgccagacctttggctcctcaggaactgacaaacag
tatctgaacacagtcattccttacgagaagaaagcctctcctccctcagtggaagacctg
cagatgctgacaaacattctctttgccatgaaggaggataatgagaaggtgcctactttg
ctaacggactacattttaaaagtggtagcccagggagccctggtgcttgcggattctgga
actagcggcctccaagtacatctggacaagaagacaaagtga

>gi568815587f:125251306_125531389|GENSCAN_predicted_peptide_6|173_aa
MTSSSRACQLGGCPSAGAPPEPGHERGEGVGWRRERSRAPPELRGERSLAGWLAGSPLRC
AALRPLPRPVDGGVRLSPGIRLPPPGPAQSAEPSPDRAFLQCQNRWQRPQTPGERLFYYR
RAGEGTGAAARWRGALPSGGPRALECGEQCLTASRRYHSPLFFPFAYPFSPRR

>gi568815587f:125251306_125531389|GENSCAN_predicted_CDS_6|522_bp
atgacgtccagctcccgcgcgtgccagttgggtgggtgcccgagcgcgggcgcgcccccg
gagcccgggcacgagcgcggggaaggggtggggtggaggcgggagcggagccgggcgccg
ccggagctgcgcggggagcgctcgctggctggctggctggctggctctccgctgcgctgc
gctgcgctccggccgctcccgcggcccgtggatgggggtgtccggctgagccccgggatc
cgcctccctccgccaggacccgcacagagtgcggagccttccccagaccgcgcattcctg
cagtgtcagaaccgctggcagcggccgcagacgccgggagagcgattgttttactacaga
cgggcgggagaagggaccggggcggctgcgcggtggcggggcgcgctgccgtcgggtggg
ccccgggctctggaatgcggggagcagtgtttgacggcgtcgaggaggtatcacagcccg
ctcttcttcccttttgcctatcccttctctcctcgccgctag

>gi568815587f:125251306_125531389|GENSCAN_predicted_peptide_7|82_aa
MTTTKTKQKMTSIDMDVEKLEPMYIAGGKYPYPVPIKRLAGRATQVADASGWGCKLLSTG
GCKLLSTGGCKRLMQTATFIAQ

>gi568815587f:125251306_125531389|GENSCAN_predicted_CDS_7|249_bp
atgacaacaacaaaaacaaaacagaaaatgacaagcattgacatggatgtggagaaattg
gaacccatgtacattgctggtgggaagtacccctatcctgtgcccataaaaagactagct
ggcagagcaacacaagtggctgatgcaagtggttggggatgcaagctgctgagcactggg
ggatgcaagctgctgagcactgggggatgcaagcggctgatgcaaactgccacctttatc
gcccagtaa