GENSCAN 1.0	Date run:  4-Nov-116	Time: 11:21:41

Sequence gi568815582r:84876346_85090618 : 214273 bp : 50.50% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   1093   1165   73  2  1  120  116    84 0.951  12.86
 1.02 Intr +   4164   4239   76  0  1  106   76    57 0.795   5.82
 1.03 Intr +  12885  13018  134  2  2   88   97   292 0.923  29.54
 1.04 Intr +  20544  20667  124  0  1   92   43    50 0.121   1.49
 1.05 Intr +  26883  26917   35  2  2   99   80    18 0.150  -0.88
 1.06 Term +  31022  31082   61  2  1   68   49   103 0.169   1.68
 1.07 PlyA +  31285  31290    6                              -0.45

 2.00 Prom +  31538  31577   40                              -4.66
 2.01 Init +  44132  44262  131  1  2   96   10   144 0.645   7.02
 2.02 Term +  44280  44532  253  0  1   80   36   379 0.997  27.01
 2.03 PlyA +  44697  44702    6                               1.05

 3.00 Prom +  45222  45261   40                              -1.06
 3.01 Init +  53162  53233   72  1  0   84   26   112 0.491   5.67
 3.02 Intr +  56657  56791  135  1  0   60   64   131 0.574   8.66
 3.03 Intr +  61658  61711   54  1  0   76  117    13 0.200   2.18
 3.04 Intr +  64978  65201  224  0  2   92  100    57 0.340   4.23
 3.05 Intr +  69298  69343   46  1  1  135   61    25 0.239   2.91
 3.06 Term +  71474  71620  147  1  0   82   54    66 0.348   0.50
 3.07 PlyA +  71755  71760    6                               1.05

 4.18 PlyA -  74375  74370    6                               1.05
 4.17 Term -  78109  78020   90  1  0   73   37    88 0.078  -0.08
 4.16 Intr -  82894  82779  116  2  2   88   34    74 0.076   2.17
 4.15 Intr -  85689  85521  169  0  1   79   34    90 0.441   2.22
 4.14 Intr -  86701  86598  104  2  2  100   66    38 0.409   2.69
 4.13 Intr -  88218  88096  123  1  0   74   44    61 0.338   0.86
 4.12 Intr -  90492  90417   76  0  1  108   77     6 0.331   0.59
 4.11 Intr -  91668  91544  125  1  2   88   47    54 0.069   1.60
 4.10 Intr - 100174 100021  154  1  1  109   32    63 0.047   2.45
 4.09 Intr - 100793 100750   44  0  2   82  115    59 0.627   5.96
 4.08 Intr - 101660 101579   82  2  1   92  119    11 0.898   3.81
 4.07 Intr - 102940 102844   97  0  1   59   93    31 0.810   0.71
 4.06 Intr - 105649 105480  170  1  2   67   87   189 0.422  15.44
 4.05 Intr - 110173 110101   73  0  1   55   53   176 0.255  10.21
 4.04 Intr - 111374 111298   77  2  2   61   86    64 0.894   1.81
 4.03 Intr - 112528 112418  111  1  0   69   70    74 0.915   4.28
 4.02 Intr - 114290 113959  332  0  2  123   76   471 0.972  44.75
 4.01 Init - 117884 117755  130  2  1  102  103    12 0.940   4.44
 4.00 Prom - 130560 130521   40                              -5.86

 5.00 Prom + 134137 134176   40                              -6.16
 5.01 Init + 135047 135202  156  1  0   75   78   145 0.855  10.11
 5.02 Intr + 135353 135550  198  1  0   -8   78   156 0.434   4.55
 5.03 Intr + 156926 156992   67  1  1   88   71     6 0.015  -2.62
 5.04 Intr + 158892 158991  100  1  1   87   29    78 0.082   0.97
 5.05 Term + 160831 160996  166  1  1   92   48   109 0.771   4.69
 5.06 PlyA + 161133 161138    6                               1.05

 6.05 PlyA - 162071 162066    6                               1.05
 6.04 Term - 168871 168845   27  1  0   94   42    53 0.440  -0.63
 6.03 Intr - 169688 169304  385  1  1   53   41   201 0.366   6.75
 6.02 Intr - 171300 171181  120  2  0   95   29    59 0.168   0.31
 6.01 Init - 178555 178458   98  1  2   79   94    86 0.510   8.09
 6.00 Prom - 182400 182361   40                              -4.76

 7.00 Prom + 182653 182692   40                              -7.56
 7.01 Init + 190727 191055  329  1  2   91   86   499 0.997  46.80
 7.02 Intr + 195438 195537  100  0  1  125  110   150 0.980  21.01
 7.03 Intr + 196580 196653   74  1  2  114   91    47 0.995   5.80
 7.04 Intr + 199499 199569   71  2  2   87  103   103 0.977  10.53
 7.05 Intr + 201080 201287  208  0  1   85   53   421 0.928  36.44
 7.06 Intr + 202070 202110   41  2  2  102  105    40 0.915   4.97
 7.07 Intr + 202580 202658   79  0  1  110   95   178 0.964  19.31
 7.08 Intr + 206285 206454  170  2  2   79   75    58 0.472   3.19
 7.09 Intr + 209935 210379  445  2  1   16   74   375 0.356  21.36
 7.10 Intr + 210727 210821   95  1  2   97  100   208 0.999  22.51
 7.11 Intr + 211197 211233   37  1  1  108   65    42 0.820   1.22
 7.12 Intr + 211357 211400   44  1  2   95   55    60 0.434   1.28

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815582r:84876346_85090618|GENSCAN_predicted_peptide_1|167_aa
XQDLDCYTTVAQLCPFEKPATHCPRIHCPAHCKDEPSYWAPVFGTNIYADTSSICKTAVH
AGVISNESGGDVDVMPVDKKKTYVGSLRNGVQSESAGFRTPQGSFPVCLWNQNRPSTLLN
PVCVLGDAKRQALPPQPGPFLDLPQEPRPFVFMAHLFSAVTFGPIED

>gi568815582r:84876346_85090618|GENSCAN_predicted_CDS_1|504_bp
ntgcaggatttggactgctacacgaccgttgctcagctgtgcccgtttgaaaagccagca
actcactgcccaagaatccattgtccggcacactgcaaagacgaaccttcctactgggct
ccggtgtttggaaccaacatctatgcagatacctcaagcatctgcaagacagccgtgcac
gcgggagtcatcagcaacgagagtgggggtgacgtggacgtgatgcccgtggataaaaag
aagacctacgtgggctcgctcaggaatggagttcagtctgaaagtgctggcttcaggact
ccacagggcagcttccctgtctgcctctggaaccagaaccggccgtccaccctccttaat
cccgtctgtgtgttgggtgatgccaaaaggcaagctcttcctcctcagcctggccccttc
ctggacctcccccaagaacccaggcccttcgtcttcatggcccacctgttttctgccgtg
acctttggtcccattgaggactaa

>gi568815582r:84876346_85090618|GENSCAN_predicted_peptide_2|127_aa
MNYTVQTFFTPANSSRSPNYKMLKEEQEVAVLGAPHNPAPLTSTETSVTDHVIWSLFNTL
FMNSCCLGFIAFAYSVKSRDRKMVDDLNRAQAYASTAKHVNIWALTVGILMTILLIIIPV
LTFQIYR

>gi568815582r:84876346_85090618|GENSCAN_predicted_CDS_2|384_bp
atgaactacaccgtccaaaccttcttcactcccgccaacagcagccgttcccctaactat
aagatgctcaaggaggagcaagaggtggctgtgctgggggcaccccacaaccctgctccc
ctgacgtccaccgagacctctgtgaccgaccatgtcatctggtccctgtttaacaccctc
ttcatgaactcctgctgcctgggcttcatagcatttgcctactccgtgaagtctagggac
aggaagatggttgacgacctgaacagggcccaggcctatgcctccaccgccaagcatgtg
aacatctgggccctgactgtgggcatcctcatgaccattctgctcatcatcatcccggtg
ctgaccttccaaatctatcgatag

>gi568815582r:84876346_85090618|GENSCAN_predicted_peptide_3|225_aa
MPPDAADAVAMSEGGTPSSQQDGEGIPGFSIESPTSQTTPQCQAIWDSWSPYEELMSPEQ
PSSKEGQEQKGHPAHGSLYSGKAIKTPGRMGQLRPVSPTLPSGLSAGRSCRCRPWCCPCA
ACGVPEPTHPCTFEHSPFPERSLNYPNSSVTSGPALPNPLPHHVKKVLASALPSAMIPTQ
VRRECGQFNSADGPKTNQEEAARLGASLIGTIQNDAGDVRAVLAI

>gi568815582r:84876346_85090618|GENSCAN_predicted_CDS_3|678_bp
atgccgccggatgctgcggatgctgtggccatgagcgagggtgggacccccagcagccag
caggacggggagggcattcctggtttcagcattgaaagtcccacgtcccagacaacccct
cagtgccaggcaatctgggacagctggtcaccctacgaggagctgatgtccccagagcag
ccctccagcaaggaaggtcaagaacagaagggccacccggctcacggttctctttattca
ggcaaagccatcaagaccccgggccgcatgggccagctgcgtcccgtgtccccaacctta
ccctcgggcctcagtgctgggcgctcctgccgttgccggccctggtgctgcccgtgcgcc
gcctgcggtgtcccggagcccacgcatccctgcacctttgagcacagtccttttcctgag
cgctccctaaattatcccaactcaagtgtgacttcggggcctgctcttcccaaccccctt
ccccaccatgtaaagaaggtgcttgcttctgctttaccttctgccatgattcccacccag
gtcagaagggaatgtggccaatttaactctgcggacggccccaaaaccaaccaggaagaa
gctgcacgcctcggagcctcactgataggcacgattcagaatgacgctggggatgttcgt
gcagtcctggccatttga

>gi568815582r:84876346_85090618|GENSCAN_predicted_peptide_4|690_aa
MPLLCARQHARHEGDRAGGDPDPPGGADIRPGGRTCKSSQVASGCVREIMQPSGHRLRDV
EHHPLLAENDNYDSSSSSSSEADVADRVWFIRDGCGMICAVMTWLLVAYADFVVTFVMLL
PSKDFWYSVVNGVIFNCLAVLALSSHLRTMLTDPEKSSDCRPSACTVKTGLDPTLVGICG
EGTESVQSLLLPSLVDGHLGEFCFSAVTNHAALNGRVACVFNASPVDAYEPSRQPCECLP
EGAVPKGNATKEYMESLQLKPGEVIYKCPKCCCIKPERAHHCRYVRCCIKPERIRHCGIC
KRCIRKMDHHCPWVNNCVGEKNQRFFVLFTMYIALSSVHALILCGFQFISCVRGQWTVMF
GTQIHSICNDETEIERLKSEKPTWERRLRWEGMKSVFGGPPSLLWMNPFVGFRFRRLPTR
PRKGSAHVVARVQTSCLFMAEHDSITCLRLYRRYPPSIPQQPRGRGKQLRKDGVNRRGAP
AMATTVPHHKDLEQMLVNYMNEEMNGYFSLIVQGLAQNPPLPGSLPGHPWQDRAVWDPSS
YSGYIHKGCLYEEIVRKFSLQGRHEQEERLTVPVASDEHARNFSRLTVLAAPSKCRQATA
HADSPPQGKIKGGETQTPESCQRRALPVIVGVKVPGTASRRNSSSWDLSVLFWNMESEGV
KRPEVTGIPWLLAASSTFRAGNVASLLLLR

>gi568815582r:84876346_85090618|GENSCAN_predicted_CDS_4|2073_bp
atgcccttgctgtgcgccagacagcatgcaaggcatgagggggacagggcaggaggagac
ccagacccccctggaggggctgacatcaggccgggaggtcggacctgcaagagctctcag
gtagcaagtgggtgcgtcagggaaatcatgcagccatcaggacacaggctccgggacgtc
gagcatcatcctctcctggctgaaaatgacaactatgactcttcatcgtcctcctcctcc
gaggctgacgtggctgaccgggtctggttcatccgtgacggctgcggcatgatctgtgct
gtcatgacgtggcttctggtcgcctatgcagacttcgtggtgactttcgtcatgctgctg
ccttccaaagacttctggtactctgtggtcaacggggtcatctttaactgcttggccgtg
cttgccctgtcatcccacctgagaaccatgctcaccgaccctgaaaaatccagtgactgc
cgaccatctgcctgcacagtgaaaactgggctggacccaacccttgtgggcatttgtggt
gagggaaccgagtctgtgcaaagcctcctgcttccatcgttagttgatgggcatctgggc
gagttctgcttttcggctgttacaaatcatgctgctctgaacggccgcgtagcctgtgtc
ttcaatgccagccccgtggatgcctacgagccttctcggcagccgtgcgagtgccttccg
gagggggcagtacccaaaggaaacgctacgaaagaatacatggagagcttgcagctgaag
cccggggaagtcatctacaagtgccccaagtgctgctgtattaaacccgagcgcgcccac
cactgcaggtacgtgcgctgctgtattaaacccgagcgcatccgccactgcggtatttgc
aaaagatgtattcggaaaatggatcatcactgcccgtgggtgaacaattgtgtaggagaa
aagaatcaaagattttttgtgctcttcactatgtatatagctctgtcttcagtccatgct
ctgatcctttgtggatttcagttcatctcctgtgtccgagggcagtggactgttatgttt
ggcacccaaatccactccatatgcaacgacgagacggagatcgagcgattgaaaagtgag
aagcccacatgggagcggaggctgcgatgggaagggatgaagtccgtctttggggggccc
ccctcactcctctggatgaatccctttgtgggcttccgatttaggcgactgcccacgaga
cccagaaaaggttctgcccatgtggtagcgcgtgtccagacttcatgcctttttatggca
gaacacgacagcatcacgtgtttgcgcctgtatcgccgttatccacccagtatcccacag
caacctcgaggcaggggcaagcagctccggaaggacggagtaaacaggcggggagcgcca
gccatggccaccactgtcccccatcacaaagacttggaacagatgcttgttaactacatg
aatgaagaaatgaatggctacttctcactcattgttcaaggcctggctcagaatccacct
cttccagggagcctccctggtcacccctggcaggaccgagctgtctgggaccctagctca
tattcgggttacatccataaaggctgtctctacgaggaaattgttaggaaattttctcta
caaggcagacatgagcaggaggagcgcttgaccgttccagtcgcctcagacgagcatgca
cgcaacttcagtagactcacagtgctggcggccccttctaagtgccgacaggccactgca
catgcagacagcccaccccagggaaaaatcaagggaggagagacgcaaaccccagaatca
tgccaacgacgggccttgcctgtcattgtgggtgtcaaagtaccagggactgccagcagg
aggaattcctcctcctgggacctcagcgtcctcttctggaatatggagtctgagggtgtg
aagcgtccagaggtcactggcatcccatggctcctggccgcttcgtccaccttcagagcc
ggcaatgttgcatctctgctgctgcttcggtaa

>gi568815582r:84876346_85090618|GENSCAN_predicted_peptide_5|228_aa
MAGLERAPRLGSAWSPGSRRAGRKEAAAKQMPQPGALAGERGGASAGSEPDERCRQTEVR
RRKDRGYGLQQGPSHAVRLRNRVGNALSGVCTRARGGVSEAAPVACTICGDVTEGNGKSP
QHLYPSQQGRHSSRDATAASGQKWLCKFCVVLLVLRFPRPSPVLSMEQVTKKRWCVWRHF
PGLYITARRDSQADDSVAKVTNELGENENLGTVEQMENARVSACGRLL

>gi568815582r:84876346_85090618|GENSCAN_predicted_CDS_5|687_bp
atggccgggctggagcgggccccgcggctcggctcggcttggtcccctgggtcccgccgg
gcaggtcggaaggaggctgcagccaagcaaatgcctcagcccggagccttggctggagag
cggggcggtgcgagcgccggaagtgaacccgacgagagatgccgccaaactgaagtccgg
aggagaaaggataggggctacgggctgcagcagggtccaagccacgccgttaggctgcgg
aaccgggttgggaatgcccttagcggagtgtgtacccgcgcccgcggcggtgtctcagag
gcagctccagtggcctgtactatatgcggggatgtgaccgaaggaaatgggaaaagccca
caacatctttacccctcccagcagggacgccacagcagcagggatgccacagctgcttca
ggtcagaagtggctctgcaagttctgtgttgtcctgctcgttcttcggttccccaggcct
agcccagtgctcagcatggagcaggtgacgaagaaacgctggtgtgtttggagacatttt
cctggcctttacatcacagccaggcgtgactcacaagcagatgactcagtggcaaaagtg
accaatgagctaggggaaaatgagaatctgggaacagtggaacaaatggaaaatgccaga
gtcagtgcgtgtggacggctgctgtga

>gi568815582r:84876346_85090618|GENSCAN_predicted_peptide_6|209_aa
MPFNEPSQSEYVHAATTRARTYNIAIPFRPPQRKFHSGSGGNSDSASRGVSLQVSEALRK
PSFPAGGTVVQRGGCGTTHPLRHFLWILPRVVVPLRCTLSAAIICLALQEHSHGTKISTE
SPSQMGRWKWATHWSSTKPCEVPADAGGTRPHSLHRLEQRPTHRAEPGPLPDDNLGPLTL
QNGSRFQEFHVMSLKQGHWGWHRDVQKRI

>gi568815582r:84876346_85090618|GENSCAN_predicted_CDS_6|630_bp
atgccgttcaatgaaccctcacaaagcgaatacgtccatgcagccaccacccgcgccagg
acgtacaacattgccatcccctttaggcctccccaaaggaaattccacagcggcagtggt
ggcaacagtgacagtgccagcagaggggtcagcctgcaggtgtctgaagctctgaggaaa
ccttcctttccagctggaggaacggtggtccaaagagggggctgtggcacgacccacccc
ctgcgacatttcctgtggatccttcctcgggtggtcgtccctttgagatgcacattgtcg
gctgccatcatctgcctggccctgcaggagcacagccatgggactaagataagtacagaa
agtccaagccagatgggcagatggaagtgggctactcactggagctcaacaaagccttgc
gaggtgcccgctgatgcaggtggcactcgtccacacagcctgcacaggctggagcagagg
ccaacgcacagagcagaacctggtcccctgcctgatgacaacttaggaccactgactctt
caaaacggatcccggttccaggaattccatgtcatgtccttaaaacaaggtcactggggc
tggcacagagatgtccagaaacgcatctga

>gi568815582r:84876346_85090618|GENSCAN_predicted_peptide_7|565_aa
METPEVPVGSLIDFGPEAPTSSPLEAPPPVLQDGDGSLGDGASESETTESADSENDMGES
PSHPSWDQDRRSSSNESFSSNQSTESTQDEETLALRDFMRGYVEKIFSGGEDLDQEEKAK
FGEYCSSENGKGREWFARYVSAQRCNSKCVSEATFYRLVQSFAVVLFECHQMDDFGPAKN
LMTMCFTYYHIGKPQLLPPESREKPAGSIDSYLKSANSWLAEKKDIAERLLKNTSARTEN
VKGFFGGLETKLKGPLARRNEEDENKPQEKRPRAVTAYSPEDEKKGEKIYLYTHLKQQPI
CAGSCEGHCRVGAVHCAELLQQAQPRRRCSLVAGGEGGPGEVRPALGQAGNASQNWAGQA
QTPLSNRSKALGPPSLPVECLDSRVVLRAFRAIKSTFISTSLYLMKSEMNVGDPKRGVRI
PAGLVEGPAHGSPVEGTPFCARWGPYMGAASTCGSEQGEELGQGQHHLSPASVTSCACRE
KWCHMTQEERDDSLRFNENITFGQLGTFTHNMLAFGLNKKLCNDFLKKQAVIGNLDEDHT
AIMSIGGQGWRWFFFIEKDLHLGVX

>gi568815582r:84876346_85090618|GENSCAN_predicted_CDS_7|1695_bp
atggagaccccagaggtccccgtgggctcgctaatcgactttgggcctgaggcacccacc
tcttctcccctggaggcaccaccccctgtgctgcaggacggcgatggctccctgggggac
ggtgcatcagagagtgagaccactgagtctgcggacagtgagaatgacatgggcgagtcg
ccctcgcacccgtcctgggaccaagaccgccgttcctcctccaacgagtccttctcctcc
aaccagagcaccgagtctacccaggatgaagagaccctggcactcagggacttcatgcgt
ggctacgtggagaagatcttctctggaggggaggacttggatcaggaggagaaagccaag
tttggagagtactgcagcagtgaaaatggaaaaggccgggagtggtttgctcgatacgtg
agtgcccagcgctgcaactccaagtgtgtctcagaggcaaccttctaccgcctggtgcag
tcttttgcagtggtgctgttcgagtgtcatcagatggatgactttgggcctgccaagaac
ctcatgaccatgtgcttcacctactaccacatcggaaaaccacagctgctgcccccggag
tcccgggagaagcccgcgggcagcatcgactcctacctgaaatccgcaaacagctggctg
gccgaaaagaaggacatcgccgagcggctgctgaagaacacctcggccaggactgagaat
gtcaagggcttcttcggggggctggagaccaagctgaaggggcccctggccaggaggaac
gaggaagacgagaacaaaccccaggagaagcggcccagggctgtgaccgcgtacagcccc
gaggacgaaaagaagggggagaagatctacctgtacacgcacctgaagcaacagcccatc
tgtgcgggctcctgcgaaggccactgcagggtgggggctgtgcactgtgctgagctgctg
cagcaggcacagcccagacgcaggtgcagcctggtggccggcggggagggcggccctggg
gaggtgaggccagcgctagggcaggctggcaatgcgtcccagaactgggcaggacaggcc
cagaccccactctccaaccgtagtaaggctctggggccaccctcgctgcctgtagagtgc
ctggatagccgcgtggtgctccgtgccttcagggccataaagagcactttcatttccacg
tctctttatcttatgaagagtgagatgaatgttggggaccccaagcgcggtgtgaggatc
ccggcaggccttgtggaaggcccagcacacggctctccggtggaaggcacccccttctgt
gcccggtgggggccgtacatgggtgccgccagcacctgcgggtcagaacagggcgaggag
ctggggcaaggacagcaccatctgagccccgcttctgtcacctcctgtgcttgcagggag
aagtggtgccacatgacccaggaggagcgcgacgacagcctccggttcaacgagaacatc
accttcgggcagctgggcacattcacgcacaacatgctggcctttggactgaacaagaag
ctgtgcaatgacttcctgaagaagcaggctgtgattggcaacctggatgaagaccacact
gccatcatgagtatcgggggacaagggtggcgttggttcttcttcatcgaaaaggactta
cacttaggcgtggnn