Result of FASTA (omim) for pF1KB8242
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB8242, 198 aa
  1>>>pF1KB8242 198 - 198 aa - 198 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.3102+/-0.000336; mu= 10.6873+/- 0.021
 mean_var=139.1361+/-27.462, 0's: 0 Z-trim(120.5): 110  B-trim: 584 in 1/54
 Lambda= 0.108731
 statistics sampled from 35623 (35748) to 35623 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.767), E-opt: 0.2 (0.419), width:  16
 Scan time:  5.860

The best scores are:                                      opt bits E(85289)
NP_003121 (OMIM: 182520) sorcin isoform A [Homo sa ( 198) 1386 227.9 8.6e-60
NP_001243820 (OMIM: 182520) sorcin isoform C [Homo ( 195) 1331 219.2 3.4e-57
NP_944490 (OMIM: 182520) sorcin isoform B [Homo sa ( 183) 1249 206.3 2.4e-53
NP_001243821 (OMIM: 182520) sorcin isoform D [Homo ( 180) 1194 197.7 9.4e-51
XP_011514830 (OMIM: 182520) PREDICTED: sorcin isof ( 155) 1051 175.2 4.8e-44
NP_001317200 (OMIM: 607030) grancalcin isoform d [ ( 198)  811 137.7 1.2e-32
NP_001317199 (OMIM: 607030) grancalcin isoform d [ ( 198)  811 137.7 1.2e-32
NP_036330 (OMIM: 607030) grancalcin isoform b [Hom ( 217)  811 137.7 1.3e-32
NP_001317194 (OMIM: 607030) grancalcin isoform a [ ( 232)  811 137.7 1.4e-32
NP_001317196 (OMIM: 607030) grancalcin isoform a [ ( 232)  811 137.7 1.4e-32
NP_001317195 (OMIM: 607030) grancalcin isoform a [ ( 232)  811 137.7 1.4e-32
NP_001317197 (OMIM: 607030) grancalcin isoform c [ ( 243)  811 137.7 1.4e-32
XP_011509228 (OMIM: 607030) PREDICTED: grancalcin  ( 214)  785 133.6 2.2e-31
XP_016859256 (OMIM: 607030) PREDICTED: grancalcin  ( 214)  785 133.6 2.2e-31
XP_005246503 (OMIM: 607030) PREDICTED: grancalcin  ( 233)  785 133.6 2.3e-31
XP_006712463 (OMIM: 607030) PREDICTED: grancalcin  ( 248)  785 133.7 2.4e-31
XP_006712461 (OMIM: 607030) PREDICTED: grancalcin  ( 259)  785 133.7 2.5e-31
XP_011509230 (OMIM: 607030) PREDICTED: grancalcin  ( 137)  529 93.3   2e-19
XP_011540048 (OMIM: 610033) PREDICTED: peflin isof ( 214)  418 76.0 4.7e-14
XP_016857169 (OMIM: 610033) PREDICTED: peflin isof ( 214)  418 76.0 4.7e-14
XP_011540049 (OMIM: 610033) PREDICTED: peflin isof ( 214)  418 76.0 4.7e-14
XP_011540047 (OMIM: 610033) PREDICTED: peflin isof ( 279)  418 76.2 5.6e-14
NP_036524 (OMIM: 610033) peflin [Homo sapiens]     ( 284)  418 76.2 5.6e-14
NP_037364 (OMIM: 601057) programmed cell death pro ( 191)  414 75.4 6.6e-14
NP_001254485 (OMIM: 601057) programmed cell death  ( 189)  402 73.5 2.4e-13
XP_016857170 (OMIM: 610033) PREDICTED: peflin isof ( 184)  398 72.8 3.7e-13
NP_775111 (OMIM: 114240,253600) calpain-3 isoform  ( 309)  362 67.4 2.6e-11
XP_011525661 (OMIM: 114170) PREDICTED: calpain sma ( 200)  359 66.8 2.7e-11
NP_001740 (OMIM: 114170) calpain small subunit 1 i ( 268)  359 66.9 3.3e-11
NP_001289561 (OMIM: 114170) calpain small subunit  ( 268)  359 66.9 3.3e-11
NP_001003962 (OMIM: 114170) calpain small subunit  ( 268)  359 66.9 3.3e-11
NP_775110 (OMIM: 114240,253600) calpain-3 isoform  ( 729)  362 67.8 4.8e-11
NP_077320 (OMIM: 114240,253600) calpain-3 isoform  ( 815)  362 67.9 5.1e-11
NP_000061 (OMIM: 114240,253600) calpain-3 isoform  ( 821)  362 67.9 5.2e-11
XP_005259352 (OMIM: 114170) PREDICTED: calpain sma ( 322)  346 64.9 1.5e-10
XP_005259353 (OMIM: 114170) PREDICTED: calpain sma ( 322)  346 64.9 1.5e-10
NP_001289562 (OMIM: 114170) calpain small subunit  ( 156)  337 63.2 2.5e-10
NP_115706 (OMIM: 616767) calpain small subunit 2 [ ( 248)  339 63.7 2.8e-10
XP_016855588 (OMIM: 606401) PREDICTED: calpain-9 i ( 495)  336 63.6 6.2e-10
NP_001306605 (OMIM: 606401) calpain-9 isoform 3 [H ( 627)  336 63.7 7.2e-10
NP_057536 (OMIM: 606401) calpain-9 isoform 2 [Homo ( 664)  336 63.7 7.5e-10
NP_006606 (OMIM: 606401) calpain-9 isoform 1 [Homo ( 690)  336 63.7 7.7e-10
NP_775113 (OMIM: 114240,253600) calpain-3 isoform  ( 156)  318 60.2   2e-09
NP_775112 (OMIM: 114240,253600) calpain-3 isoform  ( 156)  318 60.2   2e-09
NP_001254487 (OMIM: 601057) programmed cell death  ( 121)  315 59.6 2.3e-09
XP_006718761 (OMIM: 114220,616907) PREDICTED: calp ( 714)  322 61.5 3.6e-09
NP_005177 (OMIM: 114220,616907) calpain-1 catalyti ( 714)  322 61.5 3.6e-09
NP_001185798 (OMIM: 114220,616907) calpain-1 catal ( 714)  322 61.5 3.6e-09
XP_011543594 (OMIM: 114220,616907) PREDICTED: calp ( 714)  322 61.5 3.6e-09
NP_001185797 (OMIM: 114220,616907) calpain-1 catal ( 714)  322 61.5 3.6e-09


>>NP_003121 (OMIM: 182520) sorcin isoform A [Homo sapien  (198 aa)
 initn: 1386 init1: 1386 opt: 1386  Z-score: 1194.4  bits: 227.9 E(85289): 8.6e-60
Smith-Waterman score: 1386; 100.0% identity (100.0% similar) in 198 aa overlap (1-198:1-198)

               10        20        30        40        50        60
pF1KB8 MAYPGHPGAGGGYYPGGYGGAPGGPAFPGQTQDPLYGYFAAVAGQDGQIDADELQRCLTQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 MAYPGHPGAGGGYYPGGYGGAPGGPAFPGQTQDPLYGYFAAVAGQDGQIDADELQRCLTQ
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 SGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNGWRQHFISFDTDRSGTV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 SGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNGWRQHFISFDTDRSGTV
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 DPQELQKALTTMGFRLSPQAVNSIAKRYSTNGKITFDDYIACCVKLRALTDSFRRRDTAQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 DPQELQKALTTMGFRLSPQAVNSIAKRYSTNGKITFDDYIACCVKLRALTDSFRRRDTAQ
              130       140       150       160       170       180

              190        
pF1KB8 QGVVNFPYDDFIQCVMSV
       ::::::::::::::::::
NP_003 QGVVNFPYDDFIQCVMSV
              190        

>>NP_001243820 (OMIM: 182520) sorcin isoform C [Homo sap  (195 aa)
 initn: 1331 init1: 1331 opt: 1331  Z-score: 1147.9  bits: 219.2 E(85289): 3.4e-57
Smith-Waterman score: 1331; 100.0% identity (100.0% similar) in 190 aa overlap (1-190:1-190)

               10        20        30        40        50        60
pF1KB8 MAYPGHPGAGGGYYPGGYGGAPGGPAFPGQTQDPLYGYFAAVAGQDGQIDADELQRCLTQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAYPGHPGAGGGYYPGGYGGAPGGPAFPGQTQDPLYGYFAAVAGQDGQIDADELQRCLTQ
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 SGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNGWRQHFISFDTDRSGTV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNGWRQHFISFDTDRSGTV
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 DPQELQKALTTMGFRLSPQAVNSIAKRYSTNGKITFDDYIACCVKLRALTDSFRRRDTAQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DPQELQKALTTMGFRLSPQAVNSIAKRYSTNGKITFDDYIACCVKLRALTDSFRRRDTAQ
              130       140       150       160       170       180

              190        
pF1KB8 QGVVNFPYDDFIQCVMSV
       ::::::::::        
NP_001 QGVVNFPYDDVSLRN   
              190        

>>NP_944490 (OMIM: 182520) sorcin isoform B [Homo sapien  (183 aa)
 initn: 1249 init1: 1249 opt: 1249  Z-score: 1078.7  bits: 206.3 E(85289): 2.4e-53
Smith-Waterman score: 1249; 100.0% identity (100.0% similar) in 181 aa overlap (18-198:3-183)

               10        20        30        40        50        60
pF1KB8 MAYPGHPGAGGGYYPGGYGGAPGGPAFPGQTQDPLYGYFAAVAGQDGQIDADELQRCLTQ
                        :::::::::::::::::::::::::::::::::::::::::::
NP_944                MQYGGAPGGPAFPGQTQDPLYGYFAAVAGQDGQIDADELQRCLTQ
                              10        20        30        40     

               70        80        90       100       110       120
pF1KB8 SGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNGWRQHFISFDTDRSGTV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_944 SGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNGWRQHFISFDTDRSGTV
          50        60        70        80        90       100     

              130       140       150       160       170       180
pF1KB8 DPQELQKALTTMGFRLSPQAVNSIAKRYSTNGKITFDDYIACCVKLRALTDSFRRRDTAQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_944 DPQELQKALTTMGFRLSPQAVNSIAKRYSTNGKITFDDYIACCVKLRALTDSFRRRDTAQ
         110       120       130       140       150       160     

              190        
pF1KB8 QGVVNFPYDDFIQCVMSV
       ::::::::::::::::::
NP_944 QGVVNFPYDDFIQCVMSV
         170       180   

>>NP_001243821 (OMIM: 182520) sorcin isoform D [Homo sap  (180 aa)
 initn: 1194 init1: 1194 opt: 1194  Z-score: 1032.2  bits: 197.7 E(85289): 9.4e-51
Smith-Waterman score: 1194; 100.0% identity (100.0% similar) in 173 aa overlap (18-190:3-175)

               10        20        30        40        50        60
pF1KB8 MAYPGHPGAGGGYYPGGYGGAPGGPAFPGQTQDPLYGYFAAVAGQDGQIDADELQRCLTQ
                        :::::::::::::::::::::::::::::::::::::::::::
NP_001                MQYGGAPGGPAFPGQTQDPLYGYFAAVAGQDGQIDADELQRCLTQ
                              10        20        30        40     

               70        80        90       100       110       120
pF1KB8 SGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNGWRQHFISFDTDRSGTV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNGWRQHFISFDTDRSGTV
          50        60        70        80        90       100     

              130       140       150       160       170       180
pF1KB8 DPQELQKALTTMGFRLSPQAVNSIAKRYSTNGKITFDDYIACCVKLRALTDSFRRRDTAQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DPQELQKALTTMGFRLSPQAVNSIAKRYSTNGKITFDDYIACCVKLRALTDSFRRRDTAQ
         110       120       130       140       150       160     

              190        
pF1KB8 QGVVNFPYDDFIQCVMSV
       ::::::::::        
NP_001 QGVVNFPYDDVSLRN   
         170       180   

>>XP_011514830 (OMIM: 182520) PREDICTED: sorcin isoform   (155 aa)
 initn: 1051 init1: 1051 opt: 1051  Z-score: 911.7  bits: 175.2 E(85289): 4.8e-44
Smith-Waterman score: 1051; 100.0% identity (100.0% similar) in 154 aa overlap (45-198:2-155)

           20        30        40        50        60        70    
pF1KB8 PGGYGGAPGGPAFPGQTQDPLYGYFAAVAGQDGQIDADELQRCLTQSGIAGGYKPFNLET
                                     ::::::::::::::::::::::::::::::
XP_011                              MQDGQIDADELQRCLTQSGIAGGYKPFNLET
                                            10        20        30 

           80        90       100       110       120       130    
pF1KB8 CRLMVSMLDRDMSGTMGFNEFKELWAVLNGWRQHFISFDTDRSGTVDPQELQKALTTMGF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CRLMVSMLDRDMSGTMGFNEFKELWAVLNGWRQHFISFDTDRSGTVDPQELQKALTTMGF
              40        50        60        70        80        90 

          140       150       160       170       180       190    
pF1KB8 RLSPQAVNSIAKRYSTNGKITFDDYIACCVKLRALTDSFRRRDTAQQGVVNFPYDDFIQC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RLSPQAVNSIAKRYSTNGKITFDDYIACCVKLRALTDSFRRRDTAQQGVVNFPYDDFIQC
             100       110       120       130       140       150 

           
pF1KB8 VMSV
       ::::
XP_011 VMSV
           

>>NP_001317200 (OMIM: 607030) grancalcin isoform d [Homo  (198 aa)
 initn: 817 init1: 782 opt: 811  Z-score: 707.0  bits: 137.7 E(85289): 1.2e-32
Smith-Waterman score: 811; 59.4% identity (82.3% similar) in 192 aa overlap (7-198:8-198)

                10        20        30        40        50         
pF1KB8  MAYPGHPGAGGGYYPGGYGGAPGGPAFPGQTQDPLYGYFAAVAGQDGQIDADELQRCLT
              : .: .    ::.: :.     ... : .: ::.:::::::..::.:::::::
NP_001 MQMGQPVPETGPAILLDGYSG-PAYSDTYSSAGDSVYTYFSAVAGQDGEVDAEELQRCLT
               10        20         30        40        50         

      60        70        80        90       100       110         
pF1KB8 QSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNGWRQHFISFDTDRSGT
       :::: : :.::.:::::.:..::::: .: :::: ::::::.::.:...:.. : : :::
NP_001 QSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAALNAWKENFMTVDQDGSGT
      60        70        80        90       100       110         

     120       130       140       150       160       170         
pF1KB8 VDPQELQKALTTMGFRLSPQAVNSIAKRYSTNGKITFDDYIACCVKLRALTDSFRRRDTA
       :. .::..:.  ::.:::::....:.:::: ::.: ::::.::::::::::: ::.::  
NP_001 VEHHELRQAIGLMGYRLSPQTLTTIVKRYSKNGRIFFDDYVACCVKLRALTDFFRKRDHL
     120       130       140       150       160       170         

     180       190        
pF1KB8 QQGVVNFPYDDFIQCVMSV
       ::: .:: ::::.: .:..
NP_001 QQGSANFIYDDFLQGTMAI
     180       190        

>>NP_001317199 (OMIM: 607030) grancalcin isoform d [Homo  (198 aa)
 initn: 817 init1: 782 opt: 811  Z-score: 707.0  bits: 137.7 E(85289): 1.2e-32
Smith-Waterman score: 811; 59.4% identity (82.3% similar) in 192 aa overlap (7-198:8-198)

                10        20        30        40        50         
pF1KB8  MAYPGHPGAGGGYYPGGYGGAPGGPAFPGQTQDPLYGYFAAVAGQDGQIDADELQRCLT
              : .: .    ::.: :.     ... : .: ::.:::::::..::.:::::::
NP_001 MQMGQPVPETGPAILLDGYSG-PAYSDTYSSAGDSVYTYFSAVAGQDGEVDAEELQRCLT
               10        20         30        40        50         

      60        70        80        90       100       110         
pF1KB8 QSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNGWRQHFISFDTDRSGT
       :::: : :.::.:::::.:..::::: .: :::: ::::::.::.:...:.. : : :::
NP_001 QSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAALNAWKENFMTVDQDGSGT
      60        70        80        90       100       110         

     120       130       140       150       160       170         
pF1KB8 VDPQELQKALTTMGFRLSPQAVNSIAKRYSTNGKITFDDYIACCVKLRALTDSFRRRDTA
       :. .::..:.  ::.:::::....:.:::: ::.: ::::.::::::::::: ::.::  
NP_001 VEHHELRQAIGLMGYRLSPQTLTTIVKRYSKNGRIFFDDYVACCVKLRALTDFFRKRDHL
     120       130       140       150       160       170         

     180       190        
pF1KB8 QQGVVNFPYDDFIQCVMSV
       ::: .:: ::::.: .:..
NP_001 QQGSANFIYDDFLQGTMAI
     180       190        

>>NP_036330 (OMIM: 607030) grancalcin isoform b [Homo sa  (217 aa)
 initn: 860 init1: 782 opt: 811  Z-score: 706.5  bits: 137.7 E(85289): 1.3e-32
Smith-Waterman score: 833; 56.2% identity (77.4% similar) in 217 aa overlap (1-198:1-217)

               10           20                        30        40 
pF1KB8 MAYPGHPGAGGGY---YPGGYGGAP-------------GGPAFP---GQTQDPLYGYFAA
       :::::. :. :..    ::   : :             .:::.    ... : .: ::.:
NP_036 MAYPGYGGGFGNFSIQVPGMQMGQPVPETGPAILLDGYSGPAYSDTYSSAGDSVYTYFSA
               10        20        30        40        50        60

              50        60        70        80        90       100 
pF1KB8 VAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAV
       ::::::..::.::::::::::: : :.::.:::::.:..::::: .: :::: ::::::.
NP_036 VAGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAA
               70        80        90       100       110       120

             110       120       130       140       150       160 
pF1KB8 LNGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRYSTNGKITFDDYIA
       ::.:...:.. : : ::::. .::..:.  ::.:::::....:.:::: ::.: ::::.:
NP_036 LNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSKNGRIFFDDYVA
              130       140       150       160       170       180

             170       180       190        
pF1KB8 CCVKLRALTDSFRRRDTAQQGVVNFPYDDFIQCVMSV
       :::::::::: ::.::  ::: .:: ::::.: .:..
NP_036 CCVKLRALTDFFRKRDHLQQGSANFIYDDFLQGTMAI
              190       200       210       

>>NP_001317194 (OMIM: 607030) grancalcin isoform a [Homo  (232 aa)
 initn: 817 init1: 782 opt: 811  Z-score: 706.1  bits: 137.7 E(85289): 1.4e-32
Smith-Waterman score: 811; 59.4% identity (82.3% similar) in 192 aa overlap (7-198:42-232)

                                       10        20        30      
pF1KB8                         MAYPGHPGAGGGYYPGGYGGAPGGPAFPGQTQDPLY
                                     : .: .    ::.: :.     ... : .:
NP_001 EGSQDLKFPRSQLFGNFSIQVPGMQMGQPVPETGPAILLDGYSG-PAYSDTYSSAGDSVY
              20        30        40        50         60        70

         40        50        60        70        80        90      
pF1KB8 GYFAAVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFK
        ::.:::::::..::.::::::::::: : :.::.:::::.:..::::: .: :::: ::
NP_001 TYFSAVAGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFK
               80        90       100       110       120       130

        100       110       120       130       140       150      
pF1KB8 ELWAVLNGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRYSTNGKITF
       ::::.::.:...:.. : : ::::. .::..:.  ::.:::::....:.:::: ::.: :
NP_001 ELWAALNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSKNGRIFF
              140       150       160       170       180       190

        160       170       180       190        
pF1KB8 DDYIACCVKLRALTDSFRRRDTAQQGVVNFPYDDFIQCVMSV
       :::.::::::::::: ::.::  ::: .:: ::::.: .:..
NP_001 DDYVACCVKLRALTDFFRKRDHLQQGSANFIYDDFLQGTMAI
              200       210       220       230  

>>NP_001317196 (OMIM: 607030) grancalcin isoform a [Homo  (232 aa)
 initn: 817 init1: 782 opt: 811  Z-score: 706.1  bits: 137.7 E(85289): 1.4e-32
Smith-Waterman score: 811; 59.4% identity (82.3% similar) in 192 aa overlap (7-198:42-232)

                                       10        20        30      
pF1KB8                         MAYPGHPGAGGGYYPGGYGGAPGGPAFPGQTQDPLY
                                     : .: .    ::.: :.     ... : .:
NP_001 EGSQDLKFPRSQLFGNFSIQVPGMQMGQPVPETGPAILLDGYSG-PAYSDTYSSAGDSVY
              20        30        40        50         60        70

         40        50        60        70        80        90      
pF1KB8 GYFAAVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFK
        ::.:::::::..::.::::::::::: : :.::.:::::.:..::::: .: :::: ::
NP_001 TYFSAVAGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFK
               80        90       100       110       120       130

        100       110       120       130       140       150      
pF1KB8 ELWAVLNGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRYSTNGKITF
       ::::.::.:...:.. : : ::::. .::..:.  ::.:::::....:.:::: ::.: :
NP_001 ELWAALNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSKNGRIFF
              140       150       160       170       180       190

        160       170       180       190        
pF1KB8 DDYIACCVKLRALTDSFRRRDTAQQGVVNFPYDDFIQCVMSV
       :::.::::::::::: ::.::  ::: .:: ::::.: .:..
NP_001 DDYVACCVKLRALTDFFRKRDHLQQGSANFIYDDFLQGTMAI
              200       210       220       230  




198 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 10:54:56 2016 done: Fri Nov  4 10:54:57 2016
 Total Scan time:  5.860 Total Display time: -0.010

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com