GENSCAN 1.0	Date run:  4-Nov-116	Time: 10:54:45

Sequence gi568815584f:51889640_52104513 : 214874 bp : 40.80% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   6229   6340  112  0  1   52   93    64 0.264   3.78
 1.02 Intr +  33042  33161  120  1  0   93   84    56 0.055   5.25
 1.03 Intr +  53426  53503   78  0  0   73   94    64 0.318   4.10
 1.04 Intr +  61011  61126  116  1  2  106  100   101 0.376  12.35
 1.05 Term +  61698  61703    6  2  0  113   37     0 0.157  -5.71
 1.06 PlyA +  62063  62068    6                               1.05

 2.06 PlyA -  62125  62120    6                               1.05
 2.05 Term -  62762  62571  192  2  0   99   39   172 0.396   9.84
 2.04 Intr -  74974  74907   68  2  2   80   42    96 0.108   1.91
 2.03 Intr -  76951  76715  237  2  0   47   10   213 0.029   6.06
 2.02 Intr -  80357  80333   25  2  1  112   57    10 0.028  -3.02
 2.01 Init -  82852  82694  159  1  0   72   77   132 0.073  10.38
 2.00 Prom -  85430  85391   40                              -3.55

 3.03 PlyA -  88364  88359    6                               1.05
 3.02 Term -  89698  89412  287  2  2   22   40   170 0.187   0.18
 3.01 Init -  93780  93630  151  0  1   77   75   122 0.535  10.05
 3.00 Prom -  96571  96532   40                              -8.35

 4.00 Prom +  97282  97321   40                              -5.85
 4.01 Init +  99347  99386   40  1  1   70   72    72 0.735   4.20
 4.02 Intr +  99807 100061  255  1  0   73  100    96 0.720   5.79
 4.03 Intr + 101678 101802  125  0  2   79   90   136 0.995  12.28
 4.04 Intr + 104084 104183  100  1  1   87   88   107 0.992   9.36
 4.05 Intr + 108855 108941   87  1  0   70  101   116 0.997  10.12
 4.06 Intr + 110069 110157   89  0  2   64   82   115 0.950   7.27
 4.07 Intr + 112159 112227   69  0  0   49   94    79 0.892   3.06
 4.08 Intr + 114555 114603   49  2  1  108  107    43 0.999   5.53
 4.09 Term + 114723 114877  155  1  2   48   47   155 0.880   4.50
 4.10 PlyA + 115036 115041    6                               1.05

 5.24 PlyA - 115065 115060    6                               1.05
 5.23 Term - 115857 115847   11  1  2  112   42     0 0.898  -4.82
 5.22 Intr - 116210 116098  113  1  2  115   98    71 0.952   9.90
 5.21 Intr - 117021 116898  124  1  1   77   83    76 0.988   4.72
 5.20 Intr - 118328 118171  158  1  2   53   90   108 0.999   6.23
 5.19 Intr - 121408 121237  172  2  1  105   44   284 0.999  23.78
 5.18 Intr - 122044 121915  130  1  1   18   76   216 0.947  12.75
 5.17 Intr - 124817 124630  188  0  2  150   17   177 0.768  15.29
 5.16 Intr - 125636 125415  222  0  0   55   60   274 0.899  18.48
 5.15 Intr - 126567 126457  111  1  0   46   38   106 0.598   0.83
 5.14 Intr - 129655 129422  234  2  0   11   99   214 0.929  11.54
 5.13 Intr - 130539 130420  120  1  0   97  119    67 0.327  10.25
 5.12 Intr - 137705 137562  144  0  0  116  105   151 0.985  18.93
 5.11 Intr - 139211 139083  129  0  0   79   65   150 0.974  11.55
 5.10 Intr - 140051 139908  144  0  0   75   86    49 0.767   2.73
 5.09 Intr - 144009 143881  129  1  0    9   81    91 0.476   0.25
 5.08 Intr - 149338 149108  231  2  0   77  116   180 0.963  16.52
 5.07 Intr - 151212 151012  201  1  0  110   47   154 0.991  11.84
 5.06 Intr - 152711 152466  246  0  0   83  109   368 0.991  34.91
 5.05 Intr - 153292 153143  150  2  0   59   86   119 0.807   8.01
 5.04 Intr - 164682 163940  743  2  2   72   96   741 0.862  63.46
 5.03 Intr - 170717 170485  233  2  2  136   89   143 0.923  14.85
 5.02 Intr - 178524 178219  306  0  0  141  107   213 0.966  24.22
 5.01 Init - 179355 179128  228  0  0  100  102   393 0.997  38.32
 5.00 Prom - 192538 192499   40                              -3.55

 6.04 PlyA - 193754 193749    6                               1.05
 6.03 Term - 194889 194627  263  1  2   40   29   300 0.799  14.00
 6.02 Intr - 210511 210371  141  2  0   74   61   110 0.889   6.30
 6.01 Init - 212447 212252  196  2  1   71   55    88 0.677   2.94

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  46154  46076   79  2  1   85   48    79 0.977   4.88


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815584f:51889640_52104513|GENSCAN_predicted_peptide_1|143_aa
MGVVLHMLSLPAAIHVRRDLLILVFHHDCEASPAMWNYFSEGAQFFLKSKKQKSLSVGVC
LRHNGLVLIKGPFILFAEKVKSTAGHASGVVLWQPQSQCGPYKVFLKDLSSTPMASNNTA
SIAQARKLVEQLKMEANIDRIKT

>gi568815584f:51889640_52104513|GENSCAN_predicted_CDS_1|432_bp
atgggagttgtcctgcacatgctctctttgcctgctgccatccacgtaagacgtgactta
ctcatcctggtcttccaccatgactgtgaggcttccccagctatgtggaactacttttca
gaaggagctcagtttttcctaaagagtaagaaacaaaaaagcctttctgtgggagtctgt
ttaagacataacggactcgtgcttataaaaggccctttcattctgtttgctgaaaaagtg
aagtctactgctgggcatgcctctggggtggtcctctggcagccccaaagccagtgtggg
ccctacaaagtgtttctgaaagatctatccagcactccgatggccagcaacaacaccgcc
agcatagcacaagccaggaagctggtagagcagcttaagatggaagccaatatcgacagg
ataaagacctaa

>gi568815584f:51889640_52104513|GENSCAN_predicted_peptide_2|226_aa
MNWKRGFGWQDGISQVGPLKGLESQVVEIGHDVVDKEHHEPENLGFLNMVKDEAVPKMYR
PIGHQICSCLGHLERETKTTNTGVWYSQSRPKALEPNVLASNPCSMKQDTQPLKASASSS
AKKKVDDTDLTGLLPASLGLEQIEATFWTEAAPSASIPDEGDMQESEKEEARKEEKRKMA
KEHGKVALVISVMKKEEELRLLKEEQELIKSCGPLLGIKFYKGDLG

>gi568815584f:51889640_52104513|GENSCAN_predicted_CDS_2|681_bp
atgaactggaaaagagggtttggatggcaagatgggattagccaagtggggcctctcaag
ggccttgagagccaggtagttgagattggacatgatgtggttgacaaagagcaccatgaa
ccagagaaccttgggtttctgaacatggtgaaagatgaggctgtacccaagatgtacaga
cctataggccatcaaatctgcagctgccttggacacctggaaagggagacaaaaacaacc
aacactggagtctggtacagtcagtcaaggcccaaggctttagagcccaatgtcctggca
tcaaatccttgctccatgaagcaagatactcagcctctaaaagcttctgcttcctcatct
gcaaagaagaaagttgacgacactgaccttacaggattgttgccagcaagtctgggacta
gaacagatagaagcaacattctggacagaggctgctccatctgccagcatccctgatgaa
ggtgacatgcaagagagtgaaaaagaagaagcaagaaaagaggagaagaggaagatggca
aaggagcacggtaaggtcgctttagtgatctcagtcatgaagaaagaagaagaattaagg
ctgttgaaagaagagcaggagctgattaaatcctgtggtccattactaggcatcaaattt
tacaaaggagatttaggataa

>gi568815584f:51889640_52104513|GENSCAN_predicted_peptide_3|145_aa
MEEVTSKPAIKYELLPDFPMGKGQSMNKSMSTKAPCQQGFASVKLKEDQGEHLQTKDAMM
WRLLRTDQQRALLRKKNDVQDCSGQGWQIPHRRHHLAVIIVKNGKGKWISTEHEPEQPWS
DSGANCGKPSGEPSQSGIQARISSL

>gi568815584f:51889640_52104513|GENSCAN_predicted_CDS_3|438_bp
atggaggaggttacatctaagccagctatcaaatatgagctattaccggatttcccaatg
gggaaagggcagagcatgaacaaaagcatgagcacaaaggccccttgtcagcaagggttt
gcttctgtgaaactgaaggaagatcagggagagcatctgcagacgaaagacgcgatgatg
tggcgccttctgagaactgaccagcagagggcgctcttgagaaagaagaacgatgtgcaa
gattgttccggtcagggatggcaaattccacacaggaggcaccacttagctgtaattatt
gtaaagaatggtaaaggcaagtggatttccacagaacatgaaccagaacagccatggagt
gatagcggtgccaattgcgggaaacctagcggagaaccttcccaaagtggtattcaggct
aggatttcaagcctctag

>gi568815584f:51889640_52104513|GENSCAN_predicted_peptide_4|322_aa
MAGIGDLLDAVTEAGAAIGGHLPAATAFKPRLAKAAVISERLSACPPSRRVAGACASRST
SLLLSRPRPGGPEREAGTMFRRKLTALDYHNPAGFNCKDETEFRNFIVWLEDQKIRHYKI
EDRGNLRNIHSSDWPKFFEKYLRDVNCPFKIQDRQEAIDWLLGLAVRLEYGDNAEKYKDL
VPDNSKTADNATKNAEPLINLDVNNPDFKAGVMALANLLQIQRHDDYLVMLKAIRILVQE
RLTQDAVAKANQTKEGLPVALDKHILGFDTGDAVLNEAAQILRLLHIEELRELQTKINEA
IVAVQAIIADPKTDHRLGKVGR

>gi568815584f:51889640_52104513|GENSCAN_predicted_CDS_4|969_bp
atggcaggaattggtgacctactggatgctgtgaccgaggccggagccgcgattggtggg
catttgccggcggccaccgcttttaagccacgattggcgaaggccgccgtcatttcggag
cgactcagcgcctgcccgccctctcgccgcgtcgccggtgcctgcgcctcccgctccacc
tcgcttcttctctcccggccgaggcccgggggaccagagcgagaagcggggaccatgttc
cgacgcaagttgacggctctcgactaccacaaccccgccggcttcaactgcaaagatgaa
acagaatttagaaacttcatcgtttggcttgaagaccagaaaatcaggcactacaagatt
gaagacagagggaatttaagaaacatccacagcagcgactggcccaagttctttgaaaag
tatctcagagatgttaactgtcctttcaagattcaagatcgacaagaagctattgactgg
cttcttggtttagctgttagacttgaatatggagataatgctgaaaaatacaaggattta
gtacctgataattcaaaaactgctgacaatgcaactaaaaatgcagaaccattgatcaat
ttggatgtaaataatcctgattttaaggctggtgtgatggctttggctaacctgcttcag
attcagcgtcatgatgattacctggtaatgcttaaggcaattcggattttggttcaggag
cgcctgacacaggatgcagttgctaaggcaaatcaaacaaaagagggcttacctgttgct
ttagacaaacatattcttggttttgacacaggagatgcagttcttaatgaagctgctcaa
attctgcgattgctgcacatagaggagctcagagagctacagacaaaaatcaacgaagcc
atagtagctgttcaggcaattattgctgatccaaagacagaccacagactgggaaaagtt
ggaagatga

>gi568815584f:51889640_52104513|GENSCAN_predicted_peptide_5|1488_aa
MEGDRVAGRPVLSSLPVLLLLPLLMLRAAALHPDELFPHGESWGDQLLQEGDDESSAVVK
LANPLHFYEARFSNLYVGTNGIISTQDFPRETQYVDYDFPTDFPAIAPFLADIDTSHGRG
RVLYREDTSPAVLGLAARYVRAGFPRSARFTPTHAFLATWEQVGAYEEVKRGALPSGELN
TFQAVLASDGSDSYALFLYPANGLQFLGTRPKESYNVQLQLPARVGFCRGEADDLKSEGP
YFSLTSTEQSVKNLYQLSNLGIPGVWAFHIGSTSPLDNVRPAAVGDLSAAHSSVPLGRSF
SHATALESDYNEDNLDYYDVNEEEAEYLPGEPEEALNGHSSIDVSFQSKVDTKPLEGRIS
PPDSDLSSPLHPTPTYWPFYPETESSTLDPHTKEGTSLGEVGGPDLKGQVEPWDERETRS
PAPPEVDRDSLAPSWETPPPYPENGSIQPYPDGGPVPSEMDVPPAHPEEEIVLRSYPASG
HTTPLSRGTYEVGLEDNIGSNTEVFTYNAANKETCEHNHRQCSRHAFCTDYATGFCCHCQ
SKFYGNGKHCLPEGAPHRVNGKVSGHLHVGHTPVHFTDVDLHAYIVGNDGRAYTAISHIP
QPAAQALLPLTPIGGLFGWLFALEKPGSENGFSLAGAAFTHDMEVTFYPGEETVRITQTA
EGLDPENYLSIKTNIQGQVPYVSANFTAHISPYKELYHYSDSTVTSTSSRDYSLTFGAIN
QTWSYRIHQNITYQVCRHAPRHPSFPTTQQLNVDRVFALYNDEERVLRFAVTNQIGPVKE
LLSFSRGNDSCWNSCETAQLSTPDVGVVRLPRARMQNWGVFPKDSDPTPGNPCYDGSHMC
DTTARCHPGTGVDYTCECASGYQGDGRNCVDENECATGFHRCGPNSVCINLPGSYRCECR
SGYEFADDRHTCILITPPANPCEDGSHTCAPAGQARCVHHGGSTFSCACLPGYAGDGHQC
TDVDECSENRCHPAATCYNTPGSFSCRCQPGYYGDGFQCIPDSTSSLTPCEQQQRHAQAQ
YAYPGARFHIPQCDEQGNFLPLQCHGSTGFCWCVDPDGHEVPGTQTPPGSTPPHCGPSPA
ESSQNNLYFGQSLNGTVEAAWEETALQPKPAGLQPWKPTQRPPTICERWRENLLEHYGGT
PRDDQYVPQCDDLGHFIPLQCHGKSDFCWCVDKDGREVQGTRSQPGTTPACIPTVAPPMV
RPTPRPDVTPPSVGTFLLYTQGQQIGYLPLNGTRLQKDAAKTLLSLHVKWISPGSIIVGI
DYDCRERMVYWTDVAGRTISRAGLELGAEPETIVNSGLISPEGLAIDHIRRTMYWTDSVL
DKIESALLDGSERKVLFYTDLVNPRAIAVDPIRGNLYWTDWNREAPKIETSSLDGENRRI
LINTDIGLPNGLTFDPFSKLLCWADAGTKKLECTLPDGTGRRVIQNNLKYPFSIVSYADH
FYHTDWRRDGVVSVNKHSGQFTDEYLPEQRSHLYGITAVYPYCPTGRK

>gi568815584f:51889640_52104513|GENSCAN_predicted_CDS_5|4467_bp
atggagggggaccgggtggccgggcggccggtgctgtcgtcgttaccagtgctactgctg
ctgccgttgctaatgttgcgggccgcggcgctgcacccagacgagctcttcccacacggg
gagtcgtggggggaccagctcctgcaggaaggcgacgacgaaagctcagccgtggtgaag
ctggcgaatcccctgcacttctacgaagcccgattcagcaacctctacgtgggcaccaac
ggcatcatctccactcaggacttccccagggaaacgcagtatgtggactatgatttcccc
accgacttcccggccatcgccccttttctggcggacatcgacacgagccacggcagaggc
cgagtcctgtaccgagaggacacctcccccgcagtgctgggcctggccgcccgctatgtg
cgcgctggcttcccgcgctctgcgcgctttacccccacccacgccttcctggccacctgg
gagcaggtaggcgcttacgaggaggtcaagcgcggggcgctgccctcgggagagctgaac
actttccaggcagttttggcatctgatgggtctgatagctacgccctctttctttatcct
gccaacggcctgcagttccttggaacccgccccaaagagtcttacaatgtccagcttcag
cttccagctcgggtgggcttctgccgaggggaggctgatgatctgaagtcagaaggacca
tatttcagcttgactagcactgaacagtctgtgaaaaatctctatcaactaagcaacctg
gggatccctggagtgtgggctttccatatcggcagcacttccccgttggacaatgtcagg
ccagctgcagttggagacctttccgctgcccactcttctgttcccctgggacgttccttc
agccatgctacagccctggaaagtgactataatgaggacaatttggattactatgatgtg
aatgaggaggaagctgaataccttccgggtgaaccagaggaggcattgaatggccacagc
agcattgatgtttccttccaatccaaagtggatacaaagcctttagagggtaggatctcc
cctccagattctgatctgtcctcccccttgcatccaacacctacttattggccattctat
cctgaaacagaatcttccaccttggatcctcacaccaaagaaggaacatctctgggagag
gtagggggcccagatttaaaaggccaagttgagccctgggatgagagagagaccagaagc
ccagctccaccagaggtagacagagattcactggctccttcctgggaaaccccaccaccg
taccccgaaaacggaagcatccagccctacccagatggagggccagtgccttcggaaatg
gatgttcccccagctcatcctgaagaagaaattgttcttcgaagttaccctgcttcaggt
cacactacacccttaagtcgagggacgtatgaggtgggactggaagacaacataggttcc
aacaccgaggtcttcacgtataatgctgccaacaaggaaacctgtgaacacaaccacaga
caatgctcccggcatgccttctgcacggactatgccactggcttctgctgccactgccaa
tccaagttttatggaaatgggaagcactgtctgcctgaaggggcacctcaccgagtgaat
gggaaagtgagtggccacctccacgtgggccatacacccgtgcacttcactgatgtggac
ctgcatgcgtatatcgtgggcaatgatggcagagcctacacggccatcagccacatccca
cagccagcagcccaggccctcctccccctcacaccaattggaggcctgtttggctggctc
tttgctttagaaaaacctggctctgagaacggcttcagcctcgcaggtgctgcctttacc
catgacatggaagttacattctacccgggagaggagacggttcgtatcactcaaactgct
gagggacttgacccagagaactacctgagcattaagaccaacattcaaggccaggtgcct
tacgtctcagcaaatttcacagcccacatctctccctacaaggagctgtaccactactcc
gactccactgtgacctctacaagttccagagactactctctgacttttggtgcaatcaac
caaacatggtcctaccgcatccaccagaacatcacttaccaggtgtgcaggcacgccccc
agacacccgtccttccccaccacccagcagctgaacgtggaccgggtctttgccttgtat
aatgacgaagaaagagtgcttagatttgctgtgaccaatcaaattggcccggtcaaagaa
ctgctcagtttttccagagggaacgatagttgttggaattcatgtgaaacagcgcagctg
tccacacctgatgtgggtgtggtgcgacttcccagggcgaggatgcagaactggggtgtc
tttcccaaggattcagaccccactccggggaatccttgctatgatgggagccacatgtgt
gacacaacagcacggtgccatccagggacaggtgtagattacacctgtgagtgcgcatct
gggtaccagggagatggacggaactgtgtggatgaaaatgaatgtgcaactggctttcat
cgctgtggccccaactctgtatgtatcaacttgcctggaagctacaggtgtgagtgccgg
agtggttatgagtttgcagatgaccggcatacttgcatcttgatcaccccacctgccaac
ccctgtgaggatggcagtcatacctgtgctcctgctgggcaggcccggtgtgttcaccat
ggaggcagcacgttcagctgtgcctgcctgcctggttatgccggcgatgggcaccagtgc
actgatgtagatgaatgctcagaaaacagatgtcaccctgcagctacctgctacaatact
cctggttccttctcctgccgttgtcaacccggatattatggggatggatttcagtgcata
cctgactccacctcaagcctgacaccctgtgaacaacagcagcgccatgcccaggcccag
tatgcctaccctggggcccggttccacatcccccaatgcgacgagcagggcaacttcctg
cccctacagtgtcatggcagcactggtttctgctggtgcgtggaccctgatggtcatgaa
gttcctggtacccagactccacctggctccaccccgcctcactgtggaccatcaccagca
gagtcttctcagaacaacctgtattttggacaaagcctcaatggcactgtggaagcagcc
tgggaggaaactgctttgcaaccaaagccagcaggacttcaaccatggaagcccacccag
aggcccccgaccatctgtgagcgctggagggaaaacctgctggagcactacggtggcacc
ccccgggatgaccagtacgtgccccagtgcgatgacctgggccacttcatccccctgcag
tgccacggaaagagcgacttctgctggtgtgtggacaaagatggcagagaggtgcagggc
acccgctcccagccaggcaccacccctgcgtgtatacccaccgtcgctccacccatggtc
cggcccacgccccggccagatgtgacccctccatctgtgggcaccttcctgctctatact
cagggccagcagattggctacttacccctcaatggcaccaggcttcagaaggatgcagct
aagaccctgctgtctctgcatgtaaagtggatttctcctggctccataatcgtgggaatt
gattacgactgccgggagaggatggtgtactggacagatgttgctggacggacaatcagc
cgtgctggtctggaactgggagcagagcctgagacgatcgtgaattcaggtctgataagc
cctgaaggacttgccatagaccacatccgcagaacaatgtactggacggacagtgtcctg
gataagatagagagcgccctgctggatggctctgagcgcaaggtcctcttctacacagat
ctggtgaatccccgtgccatcgctgtggatccaatccgaggcaacttgtactggacagac
tggaatagagaagctcctaaaattgaaacgtcatctttagatggagaaaacagaagaatt
ctgatcaatacagacattggattgcccaatggcttaacctttgaccctttctctaaactg
ctctgctgggcagatgcaggaaccaaaaaactggagtgtacactacctgatggaactgga
cggcgtgtcattcaaaacaacctcaagtaccccttcagcatcgtaagctatgcagatcac
ttctaccacacagactggaggagggatggtgttgtatcagtaaataaacatagtggccag
tttactgatgagtatctcccagaacaacgatctcacctctacgggataactgcagtctac
ccctactgcccaacaggaagaaagtaa

>gi568815584f:51889640_52104513|GENSCAN_predicted_peptide_6|199_aa
MNTWSTEELSRTVVEFVHCTRGCSPEGQRGLAKRLWLRLDSSGRGALSSHTKASSACKIM
YPPGGEVSPRTVRYCLPCVATATATHVATTKRPAELFCPIAETTSKLSFICANAIKNVHD
SWKKVKISTLTGVWKKLIPTLMDDFKELKTSVEEGAADVVETVRELELEGEPEDVTELLQ
PHDKTSVNEKLLLMDEQRK

>gi568815584f:51889640_52104513|GENSCAN_predicted_CDS_6|600_bp
atgaatacctggagtactgaagaattatcccgtacagttgtggagtttgtgcactgcaca
aggggttgcagcccggaaggccaacggggccttgcaaaacggctttggctcaggctggat
tcctcaggaaggggagcactttcttctcatactaaggcatcgtctgcttgtaaaatcatg
tacccacctggaggagaggtgtctcctcggactgtgaggtactgcttgccctgcgtggcc
actgccacagccacacatgtggccaccaccaagaggccagctgagctgttctgtccaatt
gctgagactacttctaagttgtcctttatctgtgcaaatgccattaagaatgttcatgat
tcatggaagaaggtcaaaatatcaacattaacaggagtttggaagaagttgattccaacc
ctcatggatgactttaaagagctcaagacttcagtggaggaaggagctgcagatgtggta
gaaacagtaagagaactagaattagaaggggagcccgaagatgtgactgaattgctgcaa
cctcatgataaaacttcagtgaatgagaagttacttcttatggatgagcaaagaaagtag