Result of FASTA (ccds) for pF1KB8197
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB8197, 165 aa
  1>>>pF1KB8197 165 - 165 aa - 165 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 4.9454+/-0.000787; mu= 13.4612+/- 0.047
 mean_var=58.6522+/-11.500, 0's: 0 Z-trim(106.8): 38  B-trim: 0 in 0/51
 Lambda= 0.167468
 statistics sampled from 9184 (9223) to 9184 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.679), E-opt: 0.2 (0.283), width:  16
 Scan time:  1.550

The best scores are:                                      opt bits E(32554)
CCDS5494.1 PPIA gene_id:5478|Hs108|chr7            ( 165) 1130 281.0 2.2e-76
CCDS72898.1 PPIAL4C gene_id:653598|Hs108|chr1      ( 164)  973 243.1 5.8e-65
CCDS76197.1 PPIAL4A gene_id:653505|Hs108|chr1      ( 164)  966 241.4 1.9e-64
CCDS41375.2 PPIAL4G gene_id:644591|Hs108|chr1      ( 164)  958 239.5 7.1e-64
CCDS76201.1 PPIAL4E gene_id:730262|Hs108|chr1      ( 164)  954 238.5 1.4e-63
CCDS76202.1 PPIAL4F gene_id:728945|Hs108|chr1      ( 164)  954 238.5 1.4e-63
CCDS59199.1 PPIAL4D gene_id:645142|Hs108|chr1      ( 164)  946 236.6 5.3e-63
CCDS7358.1 PPIF gene_id:10105|Hs108|chr10          ( 207)  893 223.8 4.6e-59
CCDS443.1 PPIE gene_id:10450|Hs108|chr1            ( 301)  790 199.0 1.9e-51
CCDS2079.1 RANBP2 gene_id:5903|Hs108|chr2          (3224)  773 195.5 2.4e-49
CCDS75592.1 PPIA gene_id:5478|Hs108|chr7           ( 105)  720 181.9   1e-46
CCDS442.1 PPIE gene_id:10450|Hs108|chr1            ( 296)  716 181.2 4.6e-46
CCDS53299.1 PPIE gene_id:10450|Hs108|chr1          ( 314)  713 180.5   8e-46
CCDS10191.1 PPIB gene_id:5479|Hs108|chr15          ( 216)  699 177.0 6.1e-45
CCDS3801.1 PPID gene_id:5481|Hs108|chr4            ( 370)  659 167.4 7.8e-42
CCDS469.1 PPIH gene_id:10465|Hs108|chr1            ( 177)  620 157.8 2.9e-39
CCDS4133.1 PPIC gene_id:5480|Hs108|chr5            ( 212)  609 155.2 2.1e-38
CCDS2235.1 PPIG gene_id:9360|Hs108|chr2            ( 754)  558 143.2 3.1e-34
CCDS2702.1 NKTR gene_id:4820|Hs108|chr3            (1462)  547 140.7 3.4e-33
CCDS69169.1 PPIL6 gene_id:285755|Hs108|chr6        ( 279)  457 118.6   3e-27
CCDS5074.1 PPIL6 gene_id:285755|Hs108|chr6         ( 311)  457 118.6 3.3e-27
CCDS81308.1 PPIH gene_id:10465|Hs108|chr1          ( 134)  452 117.2 3.8e-27
CCDS4826.1 PPIL1 gene_id:51645|Hs108|chr6          ( 166)  432 112.4 1.3e-25
CCDS64162.1 PPWD1 gene_id:23398|Hs108|chr5         ( 490)  411 107.6 1.1e-23
CCDS64161.1 PPWD1 gene_id:23398|Hs108|chr5         ( 616)  411 107.7 1.3e-23
CCDS3985.1 PPWD1 gene_id:23398|Hs108|chr5          ( 646)  411 107.7 1.3e-23
CCDS2333.1 PPIL3 gene_id:53938|Hs108|chr2          ( 161)  392 102.7   1e-22
CCDS13793.1 PPIL2 gene_id:23759|Hs108|chr22        ( 520)  367 97.0 1.8e-20
CCDS46670.1 PPIL2 gene_id:23759|Hs108|chr22        ( 527)  367 97.0 1.8e-20
CCDS75252.1 CWC27 gene_id:10283|Hs108|chr5         ( 381)  312 83.6 1.4e-16
CCDS3982.2 CWC27 gene_id:10283|Hs108|chr5          ( 472)  312 83.7 1.6e-16
CCDS2332.1 PPIL3 gene_id:53938|Hs108|chr2          ( 165)  296 79.5   1e-15


>>CCDS5494.1 PPIA gene_id:5478|Hs108|chr7                 (165 aa)
 initn: 1130 init1: 1130 opt: 1130  Z-score: 1484.8  bits: 281.0 E(32554): 2.2e-76
Smith-Waterman score: 1130; 100.0% identity (100.0% similar) in 165 aa overlap (1-165:1-165)

               10        20        30        40        50        60
pF1KB8 MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGF
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 MCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 MCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTE
               70        80        90       100       110       120

              130       140       150       160     
pF1KB8 WLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQLE
       :::::::::::::::::::::::::::::::::::::::::::::
CCDS54 WLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQLE
              130       140       150       160     

>>CCDS72898.1 PPIAL4C gene_id:653598|Hs108|chr1           (164 aa)
 initn: 991 init1: 973 opt: 973  Z-score: 1279.8  bits: 243.1 E(32554): 5.8e-65
Smith-Waterman score: 973; 86.6% identity (95.1% similar) in 164 aa overlap (1-164:1-164)

               10        20        30        40        50        60
pF1KB8 MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGF
       ::: .:::::.:::.::::.:..:::::.::::::::::::::::: :::::::::::::
CCDS72 MVNSVVFFDITVDGKPLGRISIKLFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGF
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 MCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTE
       ::::::::: :::: ::::::::.:::.: :::: :::::::::::::::::::::::::
CCDS72 MCQGGDFTRPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICTAKTE
               70        80        90       100       110       120

              130       140       150       160     
pF1KB8 WLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQLE
       :::::::.:::::: .:::::::.:: ::.:::::::::::::. 
CCDS72 WLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQF 
              130       140       150       160     

>>CCDS76197.1 PPIAL4A gene_id:653505|Hs108|chr1           (164 aa)
 initn: 984 init1: 966 opt: 966  Z-score: 1270.7  bits: 241.4 E(32554): 1.9e-64
Smith-Waterman score: 966; 86.0% identity (95.1% similar) in 164 aa overlap (1-164:1-164)

               10        20        30        40        50        60
pF1KB8 MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGF
       ::: .:::::.:::.::::.:..:::::. :::::::::::::::: :::::::::::::
CCDS76 MVNSVVFFDITVDGKPLGRISIKLFADKILKTAENFRALSTGEKGFRYKGSCFHRIIPGF
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 MCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTE
       :::::::::::::: ::::::::.:::.: :::: ::::::::::::::::::::.::::
CCDS76 MCQGGDFTRHNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTE
               70        80        90       100       110       120

              130       140       150       160     
pF1KB8 WLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQLE
       :::::::.:::::: .:::::::.:: ::.:::::::::::::. 
CCDS76 WLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQF 
              130       140       150       160     

>>CCDS41375.2 PPIAL4G gene_id:644591|Hs108|chr1           (164 aa)
 initn: 976 init1: 958 opt: 958  Z-score: 1260.2  bits: 239.5 E(32554): 7.1e-64
Smith-Waterman score: 958; 84.8% identity (94.5% similar) in 164 aa overlap (1-164:1-164)

               10        20        30        40        50        60
pF1KB8 MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGF
       ::: ..::::.:::.::::.:.. ::::.::::::::::::::::: :::::::::::::
CCDS41 MVNSVIFFDITVDGKPLGRISIKQFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGF
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 MCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTE
       ::::::::. :::: ::::::::.:::.: :::: :::::::::::::::::::::::::
CCDS41 MCQGGDFTHPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICTAKTE
               70        80        90       100       110       120

              130       140       150       160     
pF1KB8 WLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQLE
       :::::::.:::::: .:::::::.:: ::.:::::::::::::. 
CCDS41 WLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQF 
              130       140       150       160     

>>CCDS76201.1 PPIAL4E gene_id:730262|Hs108|chr1           (164 aa)
 initn: 972 init1: 954 opt: 954  Z-score: 1255.0  bits: 238.5 E(32554): 1.4e-63
Smith-Waterman score: 954; 84.8% identity (94.5% similar) in 164 aa overlap (1-164:1-164)

               10        20        30        40        50        60
pF1KB8 MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGF
       ::: .:::.:. ::.::::.:..:::::.::::::::::::::::: :::::::::::::
CCDS76 MVNSVVFFEITRDGKPLGRISIKLFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGF
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 MCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTE
       ::::::::: :::: ::::::::.:::.: :::: ::::::::::::::::::::.::::
CCDS76 MCQGGDFTRPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTE
               70        80        90       100       110       120

              130       140       150       160     
pF1KB8 WLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQLE
       :::::::.:::::: .:::::::.:: ::.:::::::::::::. 
CCDS76 WLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQF 
              130       140       150       160     

>>CCDS76202.1 PPIAL4F gene_id:728945|Hs108|chr1           (164 aa)
 initn: 972 init1: 954 opt: 954  Z-score: 1255.0  bits: 238.5 E(32554): 1.4e-63
Smith-Waterman score: 954; 84.8% identity (94.5% similar) in 164 aa overlap (1-164:1-164)

               10        20        30        40        50        60
pF1KB8 MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGF
       ::: .:::.:. ::.::::.:..:::::.::::::::::::::::: :::::::::::::
CCDS76 MVNSVVFFEITRDGKPLGRISIKLFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGF
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 MCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTE
       ::::::::: :::: ::::::::.:::.: :::: ::::::::::::::::::::.::::
CCDS76 MCQGGDFTRPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTE
               70        80        90       100       110       120

              130       140       150       160     
pF1KB8 WLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQLE
       :::::::.:::::: .:::::::.:: ::.:::::::::::::. 
CCDS76 WLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQF 
              130       140       150       160     

>>CCDS59199.1 PPIAL4D gene_id:645142|Hs108|chr1           (164 aa)
 initn: 964 init1: 946 opt: 946  Z-score: 1244.6  bits: 236.6 E(32554): 5.3e-63
Smith-Waterman score: 946; 84.1% identity (93.9% similar) in 164 aa overlap (1-164:1-164)

               10        20        30        40        50        60
pF1KB8 MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGF
       ::: .:::.:. ::.::::.:..:::::.::::::::::::::::: :::::::::::::
CCDS59 MVNSVVFFEITRDGKPLGRISIKLFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGF
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 MCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTE
       ::::::::: :::: ::::::::.:::.: :::: ::::::::::::::::::::.::::
CCDS59 MCQGGDFTRPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTE
               70        80        90       100       110       120

              130       140       150       160     
pF1KB8 WLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQLE
       :::::::.:::::: .::::: :.:: ::.:::::::::::::. 
CCDS59 WLDGKHVAFGKVKERVNIVEATEHFGYRNSKTSKKITIADCGQF 
              130       140       150       160     

>>CCDS7358.1 PPIF gene_id:10105|Hs108|chr10               (207 aa)
 initn: 893 init1: 893 opt: 893  Z-score: 1173.8  bits: 223.8 E(32554): 4.6e-59
Smith-Waterman score: 893; 76.5% identity (91.4% similar) in 162 aa overlap (3-164:45-206)

                                           10        20        30  
pF1KB8                             MVNPTVFFDIAVDGEPLGRVSFELFADKVPKT
                                     :: :..:. ..:.::::: .:: :: ::::
CCDS73 SVPRSVPLRLPAARACSKGSGDPSSSSSSGNPLVYLDVDANGKPLGRVVLELKADVVPKT
           20        30        40        50        60        70    

             40        50        60        70        80        90  
pF1KB8 AENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKH
       ::::::: ::::::::::: :::.::.::::.:::: ::::::::::: .: :::: :::
CCDS73 AENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGSRFPDENFTLKH
           80        90       100       110       120       130    

            100       110       120       130       140       150  
pF1KB8 TGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKT
       .:::.::::::::::::::::::: ::.::::::::::.:::::..:. .: :::..:.:
CCDS73 VGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDVVKKIESFGSKSGRT
          140       150       160       170       180       190    

            160     
pF1KB8 SKKITIADCGQLE
       ::::.:.::::: 
CCDS73 SKKIVITDCGQLS
          200       

>>CCDS443.1 PPIE gene_id:10450|Hs108|chr1                 (301 aa)
 initn: 806 init1: 790 opt: 790  Z-score: 1036.9  bits: 199.0 E(32554): 1.9e-51
Smith-Waterman score: 790; 67.7% identity (85.7% similar) in 161 aa overlap (3-163:139-299)

                                           10        20        30  
pF1KB8                             MVNPTVFFDIAVDGEPLGRVSFELFADKVPKT
                                     :: :..:: . ..: ::... : .: :: :
CCDS44 TLEENKEEEGSEPPKAETQEGEPIAKKARSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMT
      110       120       130       140       150       160        

             40        50        60        70        80        90  
pF1KB8 AENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKH
       ::::: : : :::::.::: :::::: ::::::::: :::::::::::.::.::::::::
CCDS44 AENFRCLCTHEKGFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKH
      170       180       190       200       210       220        

            100       110       120       130       140       150  
pF1KB8 TGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKT
       ::::.:::::.::::::::::.   ::.::::::::::.: ::..... .:  ::..:: 
CCDS44 TGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEAQGSKDGKP
      230       240       250       260       270       280        

            160     
pF1KB8 SKKITIADCGQLE
       ..:. :::::.  
CCDS44 KQKVIIADCGEYV
      290       300 

>>CCDS2079.1 RANBP2 gene_id:5903|Hs108|chr2               (3224 aa)
 initn: 801 init1: 773 opt: 773  Z-score: 999.4  bits: 195.5 E(32554): 2.4e-49
Smith-Waterman score: 773; 66.7% identity (87.7% similar) in 162 aa overlap (3-164:3063-3224)

                                           10        20        30  
pF1KB8                             MVNPTVFFDIAVDGEPLGRVSFELFADKVPKT
                                     ::.::::. .:::::::...:::.. ::.:
CCDS20 FKKTFEECQQNLMKLQKGHVSLAAELSKETNPVVFFDVCADGEPLGRITMELFSNIVPRT
           3040      3050      3060      3070      3080      3090  

             40        50        60        70        80        90  
pF1KB8 AENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKH
       ::::::: :::::::.:.: :::.:: :.:::::.:.:.::::.::::.::::::: .::
CCDS20 AENFRALCTGEKGFGFKNSIFHRVIPDFVCQGGDITKHDGTGGQSIYGDKFEDENFDVKH
           3100      3110      3120      3130      3140      3150  

            100       110       120       130       140       150  
pF1KB8 TGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKT
       ::::.::::: : :::.::: :   :.: :: :::::: ::.::. :. .: ::: .:..
CCDS20 TGPGLLSMANQGQNTNNSQFVITLKKAEHLDFKHVVFGFVKDGMDTVKKIESFGSPKGSV
           3160      3170      3180      3190      3200      3210  

            160     
pF1KB8 SKKITIADCGQLE
        ..:::..:::. 
CCDS20 CRRITITECGQI 
           3220     




165 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 10:27:53 2016 done: Fri Nov  4 10:27:53 2016
 Total Scan time:  1.550 Total Display time:  0.000

Function used was FASTA [36.3.4 Apr, 2011]
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