GENSCAN 1.0	Date run:  4-Nov-116	Time: 09:42:07

Sequence gi568815597r:167446100_167653741 : 207642 bp : 44.95% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  12153  12246   94  2  1   80   94    64 0.049   4.77
 1.02 Intr +  16129  16247  119  2  2   80   79    29 0.033   1.38
 1.03 Intr +  52144  52262  119  0  2   78   68    79 0.051   4.16
 1.04 Intr +  55709  55783   75  2  0  125   75    42 0.056   5.23
 1.05 Intr +  71303  71471  169  2  1   95   78    46 0.011   4.25
 1.06 Intr +  73431  73581  151  2  1   36   66    97 0.019   2.04
 1.07 Term +  74043  74434  392  1  2  -21   43   210 0.438   0.75
 1.08 PlyA +  75318  75323    6                               1.05

 2.00 Prom +  76209  76248   40                              -3.26
 2.01 Init +  86660  86749   90  1  0   97   78    90 0.971   9.39
 2.02 Intr +  89332  89434  103  0  1   66   43    40 0.168  -2.95
 2.03 Term +  94211  94359  149  0  2   75   49   144 0.663   7.26
 2.04 PlyA +  94856  94861    6                               1.05

 3.05 PlyA -  95718  95713    6                               1.05
 3.04 Term -  96202  96199    4  0  1  132   48     0 0.152  -3.22
 3.03 Intr - 100186 100002  185  1  2   66   89    99 0.516   6.39
 3.02 Intr - 102022 101903  120  1  0   53  115    67 0.929   6.59
 3.01 Init - 107642 107289  354  2  0  111   99   764 0.986  74.94
 3.00 Prom - 117091 117052   40                              -2.46

 4.07 PlyA - 117306 117301    6                              -0.45
 4.06 Term - 117716 117569  148  1  1   78   51    64 0.127  -0.93
 4.05 Intr - 123381 123293   89  0  2  112   86    17 0.265   2.67
 4.04 Intr - 129169 129047  123  1  0   64  100    36 0.025   3.18
 4.03 Intr - 141430 141298  133  0  1   60   37   122 0.007   4.95
 4.02 Intr - 151266 151188   79  1  1   55   66    34 0.004  -3.49
 4.01 Init - 152232 152139   94  0  1  100   86    26 0.251   4.14
 4.00 Prom - 162931 162892   40                              -3.06

 5.00 Prom + 171016 171055   40                              -6.56
 5.01 Init + 177223 177302   80  0  2   75   74    49 0.248   0.78
 5.02 Intr + 184144 184365  222  1  0  136   89    75 0.082   9.64
 5.03 Intr + 200637 200732   96  0  0  114   80    44 0.018   5.32

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  72366  72309   58  0  1   86   91   113 0.952  11.09


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:167446100_167653741|GENSCAN_predicted_peptide_1|372_aa
MLFTVPAVPTCLALVWAGMSGIGMFSHRSFSGHGPSWDLGLLLGYQPASLKPLPKCHWGP
VTIEEASVGHTVRSTAKTNNALTSFYMNPHLPNIYFGMLRSLRSQKSRDTGVRMPLQTTV
CGAEMSELEQRRGARRLKFSLPHFSGRCHEADPPEQFVLSSFHWFSSSLPGLENMVEAKG
LQQSWAPTIGNEDTMKKVSPANHRIPLSDGNSIPIIRLGTYSEPKLTPKGADDLLKATQQ
VGAGQLELIQNNPGLKPKPVSNEVECHPYYTQPKLLKFRQQHDIVMIAYSPLGTTRNPTW
TNMSSLPSLKDALLKRCNKITAQVILRFNIQQGVVVIPKSFNPEKIKENLQAFDFSLTES
RTLKPGVKMSAS

>gi568815597r:167446100_167653741|GENSCAN_predicted_CDS_1|1119_bp
atgctcttcaccgtccctgctgtccccacgtgcctagccctggtgtgggcaggaatgagt
gggattgggatgttttctcacaggtctttctcaggacatggaccaagttgggatttaggg
ttgctcttgggttaccagccagcgtccctgaagcccctcccaaaatgtcactggggccct
gtgaccatagaagaggcctctgtgggccacacagtaagatcaactgctaaaaccaacaat
gccttgacatccttctacatgaatccacatcttcctaacatctattttggaatgctcagg
tccctcaggagtcagaagagcagggacactggggtccgtatgccacttcagaccactgta
tgtggagccgagatgtcagagctggagcagagaagaggagcacgcagattgaaattcagc
ctgccccacttctcaggaagatgccacgaggctgatccccctgagcagtttgtcctgtcc
tcttttcactggttttcttcctcattacctgggctagaaaacatggtggaagctaaaggc
ttgcagcaaagctgggctcccacgatcgggaatgaggacactatgaagaaagtgagtcct
gcaaatcaccgcatacctctaagtgatggaaacagcattcccatcatcagacttggtacc
tactcagagcctaaattgacccctaagggggccgatgacttactcaaggccacacagcaa
gtaggtgcaggccagctggagctcatccagaacaacccaggactcaaacccaagccagtc
agcaacgaggttgagtgccacccatattacacccaaccaaaacttttgaaatttcgccaa
caacatgacattgtcatgattgcatatagccctttggggaccactaggaatccaacctgg
acaaatatgtcttctctgccttcgttaaaggatgcacttctaaaaaggtgcaataagatc
acagctcaagttattttgcgtttcaacatccagcaaggggtggttgtcattcctaaaagc
tttaatcctgaaaagatcaaggaaaaccttcaggcctttgacttttctctcactgaatca
aggacattgaagcctggagtgaaaatgtccgcttcatag

>gi568815597r:167446100_167653741|GENSCAN_predicted_peptide_2|113_aa
MGNGVTVLVERVGDEEEERGGGVDKPSYGELGPLCRIQPAKACRKTTVQSRNGLETIEDK
SSCVAGGVQGDQKPDVEAHGVEGMINPGKPSSSSSSSSSSSSKSGLCFSSCPC

>gi568815597r:167446100_167653741|GENSCAN_predicted_CDS_2|342_bp
atggggaatggggtcactgtcttggtggaaagggtgggagatgaagaggaggaaagagga
ggtggtgtggacaagccctcctatggggagctggggcctttgtgcaggatacaacctgca
aaagcgtgtcgtaaaaccacagtccagagcaggaatggactagaaaccattgaggataaa
tcttcttgcgtggcaggtggggtgcaaggagaccagaagcctgatgtagaagcacatggt
gtggagggaatgataaacccaggaaaacctagcagcagcagcagcagcagcagcagcagc
agcagcaaatcaggcctctgcttctcctcttgcccctgctga

>gi568815597r:167446100_167653741|GENSCAN_predicted_peptide_3|220_aa
MAGLSRGSARALLAALLASTLLALLVSPARGRGGRDHGDWDEASRLPPLPPREDAARVAR
FVTHVSDWGALATISTLEAVRGRPFADVLSLSDGPPGAGSGVPYFYLSPLQLSVSNLQEN
PYATLTMTLAQTNFCKKHGFDPQSPLCVHIMLSGTVTKVNETEMDIAKHSLFIRHPEMKT
WPSSHNWFFAKLNITNIWVLDYFGGPKIVTPEEYYNVTVQ

>gi568815597r:167446100_167653741|GENSCAN_predicted_CDS_3|663_bp
atggccgggctatcccgcgggtccgcgcgcgcactgctcgccgccctgctggcgtcgacg
ctgttggcgctgctcgtgtcgcccgcgcggggtcgcggcggccgggaccacggggactgg
gacgaggcctcccggctgccgccgctaccaccccgcgaggacgcggcgcgcgtggcccgc
ttcgtgacgcacgtctccgactggggcgctctggccaccatctccacgctggaggcggtg
cgcggccggcccttcgccgacgtcctctcgctcagcgacgggcccccgggcgcgggcagc
ggcgtgccctatttctacctgagcccgctgcagctctccgtgagcaacctgcaggagaat
ccatatgctacactgaccatgactttggcacagaccaacttctgcaagaaacatggattt
gatccacaaagtcccctttgtgttcacataatgctgtcaggaactgtgaccaaggtgaat
gaaacagaaatggatattgcaaagcattcgttattcattcgacaccctgagatgaaaacc
tggccttccagccataattggttctttgctaagttgaatataaccaatatctgggtcctg
gactactttggtggaccaaaaatcgtgacaccagaagaatattataatgtcacagttcag
tga

>gi568815597r:167446100_167653741|GENSCAN_predicted_peptide_4|221_aa
MAERDQHRVQAVASEGESPKPWQLPCGIEFAVNKSHGSDGFISGFCFCFFLSSLAAIMAV
AASVLAAVVIITSSPHTASSFSLPLETACFYMASIMLMGTAQDMLFWENGSQISLGDLSK
GPGKRGHHPSLQLHDHLEFNGLKTSFGGRGIYSTLIQDTSGQSTHNLEHSNLGLQMSHFH
GELLHRILQLCTGLQPPGIIETGPPLLPNITANICTFSSCC

>gi568815597r:167446100_167653741|GENSCAN_predicted_CDS_4|666_bp
atggctgaaagggaccaacatagagttcaggctgtggcttcagagggtgaaagccctaag
ccttggcagcttccatgtggtattgagtttgcagtgaataagtctcatggatctgatggg
tttatcagcggtttctgcttttgcttcttcctctcctctcttgccgccatcatggctgtg
gctgccagtgtgcttgctgctgtggtcatcatcacttcatctcctcatactgccagcagc
ttcagcctccccctggagacagcctgcttctacatggcttctataatgcttatggggaca
gcacaggatatgctgttttgggaaaatggtagtcagatctcccttggagacctatctaag
ggtcctggtaaaaggggccatcatccgagtctccagttgcatgaccacttggagtttaat
ggcctgaagaccagctttggtgggagagggatctactctacactgatccaagatacaagt
ggacagagcacccacaatctggaacacagcaacctaggccttcagatgagccactttcat
ggggaactgttgcaccggatactgcagctctgcactggcctacaaccaccgggcatcatc
gaaactggacctccactattgccaaacattactgccaacatatgcactttcagttcatgt
tgttga

>gi568815597r:167446100_167653741|GENSCAN_predicted_peptide_5|133_aa
MRLSLGLSLSMASALRPQLVCGSLWWGAPAAGAVPQPSAAGRAPPPTRPVPAAARNWPRP
GAEGTAGIVSSGPGERVRLPQSRHLKDMEVKDPGGRRGAERALSQAQGVDASREIGSSEL
LGHRPKPGVVLAS

>gi568815597r:167446100_167653741|GENSCAN_predicted_CDS_5|399_bp
atgaggctctctctgggcctgtctctctccatggccagtgccctcaggccccagcttgtc
tgtggatctctgtggtggggggcccccgcggccggggcagtcccgcagccgagcgcagcc
gggcgcgcgccaccgcccactcgccctgtgcccgccgcagcccgaaactggccacggccg
ggagcggaggggacagcggggatcgtgagctccggcccgggcgagcgggtgcgtctgccg
cagagtcggcacctgaaggacatggaggtaaaggaccccggagggagacgcggggctgag
cgagctctttctcaagctcagggagtagatgcctcaagagaaataggatcctcggaactt
ctggggcatcgcccaaaacctggggtagtgttagccagn