FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB8109, 153 aa 1>>>pF1KB8109 153 - 153 aa - 153 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.2196+/-0.000539; mu= 12.7757+/- 0.033 mean_var=57.3603+/-11.127, 0's: 0 Z-trim(113.0): 2 B-trim: 48 in 1/54 Lambda= 0.169344 statistics sampled from 13651 (13652) to 13651 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.784), E-opt: 0.2 (0.419), width: 16 Scan time: 1.140 The best scores are: opt bits E(32554) CCDS9295.2 SAP18 gene_id:10284|Hs108|chr13 ( 172) 1024 257.3 3.1e-69 >>CCDS9295.2 SAP18 gene_id:10284|Hs108|chr13 (172 aa) initn: 1024 init1: 1024 opt: 1024 Z-score: 1356.5 bits: 257.3 E(32554): 3.1e-69 Smith-Waterman score: 1024; 100.0% identity (100.0% similar) in 153 aa overlap (1-153:20-172) 10 20 30 40 pF1KB8 MAVESRVTQEEIKKEPEKPIDREKTCPLLLRVFTTNNGRHH ::::::::::::::::::::::::::::::::::::::::: CCDS92 MLAAGVGGQGERLAGRRRKMAVESRVTQEEIKKEPEKPIDREKTCPLLLRVFTTNNGRHH 10 20 30 40 50 60 50 60 70 80 90 100 pF1KB8 RMDEFSRGNVPSSELQIYTWMDATLKELTSLVKEVYPEARKKGTHFNFAIVFTDVKRPGY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS92 RMDEFSRGNVPSSELQIYTWMDATLKELTSLVKEVYPEARKKGTHFNFAIVFTDVKRPGY 70 80 90 100 110 120 110 120 130 140 150 pF1KB8 RVKEIGSTMSGRKGTDDSMTLQSQKFQIGDYLDIAITPPNRAPPPSGRMRPY :::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS92 RVKEIGSTMSGRKGTDDSMTLQSQKFQIGDYLDIAITPPNRAPPPSGRMRPY 130 140 150 160 170 153 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Fri Nov 4 09:35:28 2016 done: Fri Nov 4 09:35:28 2016 Total Scan time: 1.140 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]