GENSCAN 1.0	Date run:  4-Nov-116	Time: 09:31:50

Sequence gi568815586f:10113130_10321849 : 208720 bp : 39.54% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.07 PlyA -   2585   2580    6                               1.05
 1.06 Term -   2900   2751  150  2  0   72   48    81 0.036  -0.57
 1.05 Intr -  12319  12168  152  2  2   83  111     5 0.414   1.26
 1.04 Intr -  14716  14618   99  2  0   93   92    67 0.539   6.76
 1.03 Intr -  15370  15194  177  2  0    8   28   157 0.470   0.67
 1.02 Intr -  17022  16851  172  0  1  125   71   122 0.998  12.79
 1.01 Init -  25850  25773   78  2  0   24   91    75 0.351   2.51
 1.00 Prom -  28550  28511   40                              -6.45

 2.00 Prom +  34244  34283   40                              -2.55
 2.01 Sngl +  40273  40779  507  0  0   53   48   265 0.883  14.79
 2.02 PlyA +  41444  41449    6                               1.05

 3.07 PlyA -  43126  43121    6                               1.05
 3.06 Term -  46892  46751  142  1  1   84   38   117 0.833   2.72
 3.05 Intr -  47333  47218  116  2  2   64   89    17 0.456  -2.27
 3.04 Intr -  47796  47657  140  1  2   86  105    34 0.791   4.16
 3.03 Intr -  53828  53565  264  0  0  -31   82   277 0.500  11.76
 3.02 Intr -  56046  55945  102  1  0  110  101   -21 0.587   0.63
 3.01 Init -  58948  58873   76  1  1   54   74   106 0.881   7.10
 3.00 Prom -  61804  61765   40                              -7.45

 4.00 Prom +  65796  65835   40                              -5.45
 4.01 Init +  66446  66499   54  1  0   51  105   146 0.994  11.95
 4.02 Intr +  69421  69464   44  0  2   74   98    28 0.972  -1.48
 4.03 Intr +  73291  73460  170  1  2   83   84   171 0.999  14.87
 4.04 Term +  76767  77011  245  1  2  112   45   255 0.983  18.68
 4.05 PlyA +  78640  78645    6                               1.05

 5.00 Prom +  81994  82033   40                              -4.55
 5.01 Init + 100001 100090   90  1  0   81   86   197 0.958  19.34
 5.02 Intr + 104934 105012   79  2  1  120   55    82 0.984   6.31
 5.03 Intr + 107311 107570  260  2  2   66   56   187 0.718   9.56
 5.04 Term + 108658 108723   66  0  0  121   48    81 0.734   4.36
 5.05 PlyA + 109974 109979    6                               1.05

 6.00 Prom + 111329 111368   40                              -8.35
 6.01 Init + 111430 111532  103  0  1   60   68   109 0.421   4.57
 6.02 Term + 112399 113102  704  2  2   47   49   302 0.396  14.90
 6.03 PlyA + 114881 114886    6                               1.05

 7.00 Prom + 117549 117588   40                              -2.35
 7.01 Init + 121099 121280  182  0  2   75  -16   193 0.144   4.38
 7.02 Intr + 124241 124421  181  2  1   92   56   103 0.167   6.45
 7.03 Intr + 138813 139031  219  2  0  100   80    98 0.772   7.78
 7.04 Intr + 164011 164034   24  0  0  117   90    20 0.013   2.40
 7.05 Intr + 167523 167651  129  2  0   65   78    69 0.014   3.57
 7.06 Intr + 188192 188240   49  1  1   62   97    38 0.001  -0.57
 7.07 Intr + 194865 194955   91  1  1   90   91    34 0.021   2.03
 7.08 Intr + 201544 201644  101  1  2   97   58   103 0.116   7.03
 7.09 Term + 205855 205964  110  2  2   78   36    77 0.054  -0.81
 7.10 PlyA + 206352 206357    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586f:10113130_10321849|GENSCAN_predicted_peptide_1|275_aa
MSNKVTKVNAMEHRAAMGKIKRDDPQTVISGAERKELPNAISIQGLSRTMEYHPDLENLD
EDGYTQLHFDSQSNTRIAVVSEKAISSKNQWDFRDPTNVKTCRCQCGTEIRSIQLSSQCA
EITIPAIEEEGILTGGEAQQILGSCAASPPWRLIAVILGILCLVILVIAVVLGTMGVLSS
PCPPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNELLIWKYTLINRKHPP
FSKRQKTSTLFQETENIHTFPRDRKGEIAASRTSV

>gi568815586f:10113130_10321849|GENSCAN_predicted_CDS_1|828_bp
atgtccaataaagtaacaaaagtgaatgcaatggaacacagagccgctatgggtaaaata
aagagggatgacccacagacagtcatctcaggagcagaaagaaaagagctcccaaatgct
atatctattcaggggctctcaagaacaatggaatatcatcctgatttagaaaatttggat
gaagatggatatactcaattacacttcgactctcaaagcaataccaggatagctgttgtt
tcagagaaagctatttcctctaagaatcagtgggatttcagggatcctactaatgtcaag
acctgtagatgtcaatgtggaactgaaattaggagcatacagttatcaagccaatgtgcc
gaaattacaattccagcaattgaagaagaaggtatccttactggtggagaagcacagcaa
atcctaggatcgtgtgctgcatctcctccttggcgcctcattgctgtaattttgggaatc
ctatgcttggtaatactggtgatagctgtggtcctgggtaccatgggggttctttccagc
ccttgtcctcctaattggattatatatgagaagagctgttatctattcagcatgtcacta
aattcctgggatggaagtaaaagacaatgctggcaactgggctctaatctcctaaagata
gacagctcaaatgaattgcttatatggaaatatacgttaataaacagaaaacatccaccc
ttttccaagagacagaaaacatccacacttttccaagagacagaaaacatccacactttt
ccaagagacagaaaaggtgaaatagctgctagccgaacctcagtctga

>gi568815586f:10113130_10321849|GENSCAN_predicted_peptide_2|168_aa
MAHKSNGQRCGFLRFSELATTSCGVAQRGELTPPAPLSSLRRVLSSHYRHSRISFARLSG
LGSSLRRTPMAGRPSAPAPNLGISLPRFSETRDSLPAGAQAMNLGPALRRCTPQPRALAP
ASTSAILHPRFRHGLRRGLGTAPKRLGKNSVRHVGLQSTQDGQWSLHR

>gi568815586f:10113130_10321849|GENSCAN_predicted_CDS_2|507_bp
atggcgcataagagtaacggccagcgctgcgggtttttacgtttcagcgagctcgcaaca
acgtcctgtggtgtggcccagcgcggggagctgaccccaccagctccgctctcaagcctt
cggagagtcctctccagtcactatcgtcattcccgcatttcctttgctaggctgtccggg
ctgggcagctccctcaggcggacacccatggctggcagaccttccgcgcctgcccctaat
ctgggcatatcactccctcggttttctgagactcgggactccttgcccgctggagcgcag
gccatgaatctgggtcccgcactgcggcgctgcacgccgcagcccagggctttggcccca
gccagcacatccgccatcctgcaccccaggttccggcacgggctgcgacggggcctcgga
actgctcccaagcggctgggaaagaactcagtcaggcatgtcggcctgcaaagcacccag
gatgggcagtggagtctgcaccgttga

>gi568815586f:10113130_10321849|GENSCAN_predicted_peptide_3|279_aa
MTFDDLKIQTVKDQPDEKSNGKKAKGLQFLYSPWWCLAAATLGVLCLGLVVTIMVLGMQL
SQVSDLLTQEQANLTHQKKKLEGQISARQQAEEASQESENELKEMIETLARKLNEKSKEQ
MELHHQNLNLQETLKRVANCSGIGRRVAPCPQDWIWHGENCYLFSSGSFNWEKSQEKCLS
LDAKLLKINSTADLDFIQQAISYSSFPFWMGLSRRNPSYPWLWEDGSPLMPHLFRVRGAV
SQTYPSGTCAYIQRGAVYAENCILAAFSICQKKANLRAQ

>gi568815586f:10113130_10321849|GENSCAN_predicted_CDS_3|840_bp
atgacttttgatgacctaaagatccagactgtgaaggaccagcctgatgagaagtcaaat
ggaaaaaaagctaaaggtcttcagtttctttactctccatggtggtgcctggctgctgcg
actctaggggtcctttgcctgggattagtagtgaccattatggtgctgggcatgcaatta
tcccaggtgtctgacctcctaacacaagagcaagcaaacctaactcaccagaaaaagaaa
ctggagggacagatctcagcccggcaacaagcagaagaagcttcacaggagtcagaaaac
gaactcaaggaaatgatagaaacccttgctcggaagctgaatgagaaatccaaagagcaa
atggaacttcaccaccagaatctgaatctccaagaaacactgaagagagtagcaaattgt
tcaggtattgggagaagggtggctccttgtccgcaagactggatctggcatggagaaaac
tgttacctattttcctcgggctcatttaactgggaaaagagccaagagaagtgcttgtct
ttggatgccaagttgctgaaaattaatagcacagctgatctggacttcatccagcaagca
atttcctattccagttttccattctggatggggctgtctcggaggaaccccagctaccca
tggctctgggaggacggttctcctttgatgccccacttatttagagtccgaggcgctgtc
tcccagacatacccttcaggtacctgtgcatatatacaacgaggagctgtttatgcggaa
aactgcattttagctgccttcagtatatgtcagaagaaggcaaacctaagagcacagtga

>gi568815586f:10113130_10321849|GENSCAN_predicted_peptide_4|170_aa
MGVRVHVVAASALLYFILLSGTRCEENCGNPEQLLVVIGALLLLCGLTSLCFRCCCLSRQ
QNGEDGGPPPCEVTVIAFDHDSTLQSTITSLQSVFGPAARRILAVAHSHSSLGQLPSSLD
TLPGYEEALHMSRFTVAMCGQKAPDLPPVPEEKQLPPTEKESTRIVDSWN

>gi568815586f:10113130_10321849|GENSCAN_predicted_CDS_4|513_bp
atgggagtccgagttcatgtcgtggcggcctcagccctgctgtatttcatcctgctttct
gggacgagatgtgaggaaaactgtggtaatcctgaacagttgctagtggtaattggcgcg
ctgcttctcctgtgtggcctgacgtccctgtgcttccgctgctgctgtctgagccgccag
caaaatggggaagatgggggcccaccaccctgtgaagtgaccgtcattgctttcgatcac
gacagcactctccagagcactatcacatctctgcagtcggtgtttggccctgcagctcgg
aggatcctggctgtggctcactcccacagctccctgggccagctgccctcctctttggac
accctcccagggtatgaagaagctcttcacatgagtcgcttcacagtagccatgtgcggg
cagaaagcacctgatctacccccagtacctgaagaaaagcagctgcctccaacagagaag
gagtcgactcgaatagttgactcttggaactga

>gi568815586f:10113130_10321849|GENSCAN_predicted_peptide_5|164_aa
MKFQYKEDHPFEYRKKEGEKIRKKYPDRVPVIVEKAPKARVPDLDKRKYLVPSDLTVGQF
YFLIRKRIHLRPEDALFFFVNNTIPPTSATMGQLYEVMVLVAQYWMPSSAVWHPLALVLD
ALITHLRSGAEGVIYPDPLTYGSDNHEEDYFLYVAYSDESVYGK

>gi568815586f:10113130_10321849|GENSCAN_predicted_CDS_5|495_bp
atgaagttccagtacaaggaggaccatccctttgagtatcggaaaaaggaaggagaaaag
atccggaagaaatatccggacagggtccccgtgattgtagagaaggctccaaaagccagg
gtgcctgatctggacaagaggaagtacctagtgccctctgaccttactgttggccagttc
tacttcttaatccggaagagaatccacctgagacctgaggacgccttattcttctttgtc
aacaacaccatccctcccaccagtgctaccatgggccaactgtatgaggtaatggttctg
gttgcacaatactggatgccgtccagtgcagtctggcatcctctagcccttgttctagat
gcgttgataacacatctgagaagtggggcagaaggtgttatttatccggatcctcttaca
tatggcagtgacaatcatgaggaagactattttctgtatgtggcctacagtgatgagagt
gtctatgggaaatga

>gi568815586f:10113130_10321849|GENSCAN_predicted_peptide_6|268_aa
MKPRTLAVSVTALKVACLESVPSDVQMCSEFLPSDSGAQLASPSGSHTGAAGGAACQSRA
VRSHSSALGLFVPSRSMGLGAVEQGVVLVGEARAAQVPMEWVGGSGMAGCRSRALPRGKA
AKARREIERSAGGPALLGDPVHPPQPLARVLSPPLPRASRAGWLAAPSAGPAKSTPTRNS
SWRASAPRSPGSARASPSTPPSKLREWAPALASPERGSHSAVGGLKGSSNATKVGAQAGE
VPRASEGSEDCQHAVTSQQAGLDLALLY

>gi568815586f:10113130_10321849|GENSCAN_predicted_CDS_6|807_bp
atgaagccgcggaccctcgcggtgagtgttacagctcttaaggtggcgtgtctggagtct
gtcccttctgatgttcagatgtgttcggagtttcttccttctgactcgggagcccagctg
gcttcacccagtggatcccacaccggggctgcaggtggagctgcctgccagtcccgcgcc
gtgcgctcgcattcctcagcccttgggttgtttgttccttcccggtcgatgggactgggc
gccgtggagcagggggtggtgctcgtcggggaggctcgggccgcacaggtgcccatggag
tgggtgggaggctcaggcatggcgggctgcaggtcccgagccctgccccgcgggaaggca
gctaaggcccggcgagaaatcgagcgcagcgccggtgggccagcactgctgggggaccca
gtacaccctccgcagccactggcccgggtgctaagtcccccattgccccgggccagcagg
gctggctggctggctgctccgagtgcggggcccgccaagtccacgcccacccggaactcc
agctggcgcgcaagcgccccacgcagccccggttccgctcgtgcctctccctccacacct
ccctccaagctgagggagtgggctccagccttggccagcccagaaaggggctcccacagt
gcagtgggggggctgaagggctcctcaaatgccaccaaagtgggagcccaggcaggggag
gtgccgagagcaagcgagggctctgaggactgccagcatgctgtcacttctcagcaggct
ggattggatttggcacttctttactga

>gi568815586f:10113130_10321849|GENSCAN_predicted_peptide_7|361_aa
MALGISAPVALQGTAPLLAVLSGCSFPKHMLQTVNGSPFWGLENGGPLLRARLGSAPVET
LELFSSLNKILHSYHSSVVKCDLILLGRWTKAWDPLSAGGGCHTGPLPLQVEGNHPTGSY
RVPNRPQYRSVAWGLGTSGLVNYTFLLNSGETTYQFLRGNKDFLKNHIKLNYCFLLIEVD
NLTLVFVIEKTLGQIFDIPKVELLFSYQCFPMVENRQKPEGEEDCVIQLSELSCTECSKK
AWRMEVLHTNKTTNATQCGGPAQLQQFNAVLSEKVHIVPSLLRSWNIISHGRFPSFETFN
TKNCIAYNPNGNALDESCEDKNRYIWVEKLFSKSSIAYIFNFVDQSLLKLLNLAMVVLKK
T

>gi568815586f:10113130_10321849|GENSCAN_predicted_CDS_7|1086_bp
atggccttgggaatctctgcccctgtggctttgcagggtacagccccactcctggctgtg
cttagtggctgcagctttcccaagcacatgttgcaaactgtcaatggatcaccattctgg
ggtttggagaatggtggccctcttctcagagctcgactaggcagtgctccagtggagact
ctagaactgttttcatcgctcaataaaattctccactcttaccattcttcagttgtcaag
tgtgacctcattcttcttggacgctggacaaaagcttgggacccactaagtgcaggtgga
ggctgtcacactggccctttgcccttgcaagtggagggcaaccaccccactggcagctac
agggttcctaacaggccacagtaccggtctgtggcctggggcttggggacctctggtctg
gtcaattacacatttctcctgaattctggagagacaacataccagttcctcagaggaaac
aaagattttcttaaaaatcacatcaaattaaattactgctttttgcttattgaagtggat
aatcttactcttgtttttgtcattgaaaagacactaggccagatatttgatattccaaag
gtagagcttctcttctcctaccaatgctttccaatggttgaaaacagacagaagccagag
ggtgaggaagactgtgtgatacagttgtcagagctcagctgcacagaatgcagcaaaaaa
gcatggagaatggaggttctgcataccaacaaaaccaccaatgccacccagtgtggaggg
cccgctcagcttcaacaattcaacgctgttctttctgaaaaagtacacatcgtgccttct
ctacttcgctcttggaacataatttctcatggcagatttccatcatttgaaacttttaat
acaaagaactgcatagcgtataatccaaatggaaatgctttagatgaatcctgtgaagat
aaaaatcgttatatctgggttgaaaaacttttctcaaaaagctctatagcatatattttc
aactttgtggaccagtctctgttgaaacttctcaaccttgccatggtggtgctaaagaag
acataa