Result of FASTA (ccds) for pF1KB8101
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB8101, 447 aa
  1>>>pF1KB8101 447 - 447 aa - 447 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.4771+/-0.00103; mu= 16.4588+/- 0.062
 mean_var=62.8857+/-12.529, 0's: 0 Z-trim(102.6): 23  B-trim: 50 in 2/47
 Lambda= 0.161733
 statistics sampled from 7000 (7012) to 7000 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.58), E-opt: 0.2 (0.215), width:  16
 Scan time:  2.750

The best scores are:                                      opt bits E(32554)
CCDS35452.1 GDI1 gene_id:2664|Hs108|chrX           ( 447) 2986 705.7 2.3e-203
CCDS7071.1 GDI2 gene_id:2665|Hs108|chr10           ( 445) 2642 625.5 3.3e-179
CCDS44352.1 GDI2 gene_id:2665|Hs108|chr10          ( 400) 1864 443.9 1.3e-124
CCDS31073.1 CHML gene_id:1122|Hs108|chr1           ( 656)  435 110.6 4.9e-24
CCDS14454.1 CHM gene_id:1121|Hs108|chrX            ( 653)  399 102.2 1.7e-21


>>CCDS35452.1 GDI1 gene_id:2664|Hs108|chrX                (447 aa)
 initn: 2986 init1: 2986 opt: 2986  Z-score: 3764.5  bits: 705.7 E(32554): 2.3e-203
Smith-Waterman score: 2986; 100.0% identity (100.0% similar) in 447 aa overlap (1-447:1-447)

               10        20        30        40        50        60
pF1KB8 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 GPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 GPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVP
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 STETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQTTSMRDVYRKFDLGQD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 STETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQTTSMRDVYRKFDLGQD
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB8 VIDFTGHALALYRTDDYLDQPCLETVNRIKLYSESLARYGKSPYLYPLYGLGELPQGFAR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 VIDFTGHALALYRTDDYLDQPCLETVNRIKLYSESLARYGKSPYLYPLYGLGELPQGFAR
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB8 LSAIYGGTYMLNKPVDDIIMENGKVVGVKSEGEVARCKQLICDPSYIPDRVRKAGQVIRI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 LSAIYGGTYMLNKPVDDIIMENGKVVGVKSEGEVARCKQLICDPSYIPDRVRKAGQVIRI
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB8 ICILSHPIKNTNDANSCQIIIPQNQVNRKSDIYVCMISYAHNVAAQGKYIAIASTTVETT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 ICILSHPIKNTNDANSCQIIIPQNQVNRKSDIYVCMISYAHNVAAQGKYIAIASTTVETT
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB8 DPEKEVEPALELLEPIDQKFVAISDLYEPIDDGCESQVFCSCSYDATTHFETTCNDIKDI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 DPEKEVEPALELLEPIDQKFVAISDLYEPIDDGCESQVFCSCSYDATTHFETTCNDIKDI
              370       380       390       400       410       420

              430       440       
pF1KB8 YKRMAGTAFDFENMKRKQNDVFGEAEQ
       :::::::::::::::::::::::::::
CCDS35 YKRMAGTAFDFENMKRKQNDVFGEAEQ
              430       440       

>>CCDS7071.1 GDI2 gene_id:2665|Hs108|chr10                (445 aa)
 initn: 2642 init1: 2642 opt: 2642  Z-score: 3330.7  bits: 625.5 E(32554): 3.3e-179
Smith-Waterman score: 2642; 86.5% identity (96.8% similar) in 444 aa overlap (1-444:1-444)

               10        20        30        40        50        60
pF1KB8 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLE
       :.:::::::::::::::::::::::::::::::::::::::::.::::::.:::::..  
CCDS70 MNEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESASITPLEDLYKRFKIPG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 GPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVP
       .:::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::
CCDS70 SPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVTEGSFVYKGGKIYKVP
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 STETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQTTSMRDVYRKFDLGQD
       :::.:::::.:::.:::::::::::.::::::.::.::::.::. :.:::::.:::::::
CCDS70 STEAEALASSLMGLFEKRRFRKFLVYVANFDEKDPRTFEGIDPKKTTMRDVYKKFDLGQD
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB8 VIDFTGHALALYRTDDYLDQPCLETVNRIKLYSESLARYGKSPYLYPLYGLGELPQGFAR
       :::::::::::::::::::::: ::.::::::::::::::::::::::::::::::::::
CCDS70 VIDFTGHALALYRTDDYLDQPCYETINRIKLYSESLARYGKSPYLYPLYGLGELPQGFAR
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB8 LSAIYGGTYMLNKPVDDIIMENGKVVGVKSEGEVARCKQLICDPSYIPDRVRKAGQVIRI
       ::::::::::::::...::..::::.:::::::.::::::::::::. :::.:.:::::.
CCDS70 LSAIYGGTYMLNKPIEEIIVQNGKVIGVKSEGEIARCKQLICDPSYVKDRVEKVGQVIRV
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB8 ICILSHPIKNTNDANSCQIIIPQNQVNRKSDIYVCMISYAHNVAAQGKYIAIASTTVETT
       ::::::::::::::::::::::::::::::::::::::.:::::::::::::.:::::: 
CCDS70 ICILSHPIKNTNDANSCQIIIPQNQVNRKSDIYVCMISFAHNVAAQGKYIAIVSTTVETK
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB8 DPEKEVEPALELLEPIDQKFVAISDLYEPIDDGCESQVFCSCSYDATTHFETTCNDIKDI
       .::::..:::::::::.::::.::::  : : : :::.: : .:::::::::::.:::.:
CCDS70 EPEKEIRPALELLEPIEQKFVSISDLLVPKDLGTESQIFISRTYDATTHFETTCDDIKNI
              370       380       390       400       410       420

              430       440       
pF1KB8 YKRMAGTAFDFENMKRKQNDVFGEAEQ
       ::::.:. ::::.::::.::..::   
CCDS70 YKRMTGSEFDFEEMKRKKNDIYGED  
              430       440       

>>CCDS44352.1 GDI2 gene_id:2665|Hs108|chr10               (400 aa)
 initn: 1862 init1: 1862 opt: 1864  Z-score: 2350.4  bits: 443.9 E(32554): 1.3e-124
Smith-Waterman score: 2281; 77.0% identity (86.7% similar) in 444 aa overlap (1-444:1-399)

               10        20        30        40        50        60
pF1KB8 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLE
       :.:::::::::::::::::::::::::::::::::::::::::.::::::.:::::..  
CCDS44 MNEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESASITPLEDLYKRFKIPG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 GPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVP
       .::::::::::::::::::::::::                                   
CCDS44 SPPESMGRGRDWNVDLIPKFLMANG-----------------------------------
               70        80                                        

              130       140       150       160       170       180
pF1KB8 STETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQTTSMRDVYRKFDLGQD
                 :::.:::::::::::.::::::.::.::::.::. :.:::::.:::::::
CCDS44 ----------LMGLFEKRRFRKFLVYVANFDEKDPRTFEGIDPKKTTMRDVYKKFDLGQD
                    90       100       110       120       130     

              190       200       210       220       230       240
pF1KB8 VIDFTGHALALYRTDDYLDQPCLETVNRIKLYSESLARYGKSPYLYPLYGLGELPQGFAR
       :::::::::::::::::::::: ::.::::::::::::::::::::::::::::::::::
CCDS44 VIDFTGHALALYRTDDYLDQPCYETINRIKLYSESLARYGKSPYLYPLYGLGELPQGFAR
         140       150       160       170       180       190     

              250       260       270       280       290       300
pF1KB8 LSAIYGGTYMLNKPVDDIIMENGKVVGVKSEGEVARCKQLICDPSYIPDRVRKAGQVIRI
       ::::::::::::::...::..::::.:::::::.::::::::::::. :::.:.:::::.
CCDS44 LSAIYGGTYMLNKPIEEIIVQNGKVIGVKSEGEIARCKQLICDPSYVKDRVEKVGQVIRV
         200       210       220       230       240       250     

              310       320       330       340       350       360
pF1KB8 ICILSHPIKNTNDANSCQIIIPQNQVNRKSDIYVCMISYAHNVAAQGKYIAIASTTVETT
       ::::::::::::::::::::::::::::::::::::::.:::::::::::::.:::::: 
CCDS44 ICILSHPIKNTNDANSCQIIIPQNQVNRKSDIYVCMISFAHNVAAQGKYIAIVSTTVETK
         260       270       280       290       300       310     

              370       380       390       400       410       420
pF1KB8 DPEKEVEPALELLEPIDQKFVAISDLYEPIDDGCESQVFCSCSYDATTHFETTCNDIKDI
       .::::..:::::::::.::::.::::  : : : :::.: : .:::::::::::.:::.:
CCDS44 EPEKEIRPALELLEPIEQKFVSISDLLVPKDLGTESQIFISRTYDATTHFETTCDDIKNI
         320       330       340       350       360       370     

              430       440       
pF1KB8 YKRMAGTAFDFENMKRKQNDVFGEAEQ
       ::::.:. ::::.::::.::..::   
CCDS44 YKRMTGSEFDFEEMKRKKNDIYGED  
         380       390       400  

>>CCDS31073.1 CHML gene_id:1122|Hs108|chr1                (656 aa)
 initn: 456 init1: 213 opt: 435  Z-score: 545.0  bits: 110.6 E(32554): 4.9e-24
Smith-Waterman score: 435; 25.1% identity (60.4% similar) in 331 aa overlap (69-389:226-546)

       40        50        60        70        80        90        
pF1KB8 YGGESSSITPLEELYKRFQLLEGPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTR
                                     :: .:.::. :.:...: :. .:. ..:.:
CCDS31 GDKDESKSTVEDKADEPIRNRITYSQIVKEGRRFNIDLVSKLLYSQGLLIDLLIKSDVSR
         200       210       220       230       240       250     

      100       110       120       130       140       150        
pF1KB8 YLDFKVVEGSFVYKGGKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTF
       :..:: :   .... ::. .:: ...... :. . : ::: . :::.:  ..... :  .
CCDS31 YVEFKNVTRILAFREGKVEQVPCSRADVFNSKELTMVEKRMLMKFLTFCLEYEQH-PDEY
         260       270       280       290       300       310     

      160       170       180       190       200         210      
pF1KB8 EGVDPQTTSMRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQPC--LETVNRIKLYSESL
       ..   .  :. .  .   :  ..  :. :..:.       .. :  .. .:  : . . :
CCDS31 QAF--RQCSFSEYLKTKKLTPNLQHFVLHSIAMTS-----ESSCTTIDGLNATKNFLQCL
            320       330       340            350       360       

        220       230       240       250       260         270    
pF1KB8 ARYGKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDDIIM--ENGKVVGVKSE-GE
       .:.:..:.:.:::: ::.:::: :. :..:: : : . :. ...  :.:.  .. .. :.
CCDS31 GRFGNTPFLFPLYGQGEIPQGFCRMCAVFGGIYCLRHKVQCFVVDKESGRCKAIIDHFGQ
       370       380       390       400       410       420       

           280       290          300       310        320         
pF1KB8 VARCKQLICDPSYIPDRV---RKAGQVIRIICILSHPIKNTN-DANSCQIIIPQNQVNRK
           : .: . ::. ...    .  :. : . : .. : .:. : ..  .:.:  . .  
CCDS31 RINAKYFIVEDSYLSEETCSNVQYKQISRAVLITDQSILKTDLDQQTSILIVPPAEPG-A
       430       440       450       460       470       480       

     330       340       350       360       370        380        
pF1KB8 SDIYVCMISYAHNVAAQGKYIAIASTTVETTDPEKEVEPALE-LLEPIDQKFVAISDLYE
         . :  .  .  .  .  :. .  :   .   ....: ... :. :  .  .   .: .
CCDS31 CAVRVTELCSSTMTCMKDTYL-VHLTCSSSKTAREDLESVVKKLFTPYTETEINEEELTK
        490       500        510       520       530       540     

      390       400       410       420       430       440        
pF1KB8 PIDDGCESQVFCSCSYDATTHFETTCNDIKDIYKRMAGTAFDFENMKRKQNDVFGEAEQ 
       :                                                           
CCDS31 PRLLWALYFNMRDSSGISRSSYNGLPSNVYVCSGPDCGLGNEHAVKQAETLFQEIFPTEE
         550       560       570       580       590       600     

>>CCDS14454.1 CHM gene_id:1121|Hs108|chrX                 (653 aa)
 initn: 498 init1: 203 opt: 399  Z-score: 499.6  bits: 102.2 E(32554): 1.7e-21
Smith-Waterman score: 399; 26.0% identity (59.9% similar) in 327 aa overlap (69-386:224-534)

       40        50        60        70        80        90        
pF1KB8 YGGESSSITPLEELYKRFQLLEGPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTR
                                     :: .:.::. :.:.. : :. .:. ..:.:
CCDS14 EDMSENVPIAEDTTEQPKKNRITYSQIIKEGRRFNIDLVSKLLYSRGLLIDLLIKSNVSR
           200       210       220       230       240       250   

      100       110       120       130       140       150        
pF1KB8 YLDFKVVEGSFVYKGGKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTF
       : .:: .   .... :.. .:: ...... :. . : ::: . :::.:  .. :. :  .
CCDS14 YAEFKNITRILAFREGRVEQVPCSRADVFNSKQLTMVEKRMLMKFLTFCMEY-EKYPDEY
           260       270       280       290       300        310  

      160       170       180       190       200       210        
pF1KB8 EGVDPQTTSMRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQPCLETVNRIKLYSESLAR
       .: .  :  . .  .   :  ..  .. :..:.    .   .  .. ..  : . . :.:
CCDS14 KGYEEIT--FYEYLKTQKLTPNLQYIVMHSIAM---TSETASSTIDGLKATKNFLHCLGR
              320       330       340          350       360       

      220       230       240       250       260         270      
pF1KB8 YGKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDDIIM--ENGKVVGVKSE-GEVA
       ::..:.:.:::: ::::: : :. :..:: : : . :. ...  :. :  .. .. :.  
CCDS14 YGNTPFLFPLYGQGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAIIDQFGQRI
       370       380       390       400       410       420       

         280           290       300       310       320        330
pF1KB8 RCKQLICDPSYIPD----RVRKAGQVIRIICILSHPIKNTNDANSCQII-IPQNQVNRKS
         .... . ::.:.    :: .  :. : . : .. . .:.. .. .:. .: .. .  .
CCDS14 ISEHFLVEDSYFPENMCSRV-QYRQISRAVLITDRSVLKTDSDQQISILTVPAEEPGTFA
       430       440        450       460       470       480      

              340       350       360       370        380         
pF1KB8 DIYVCMISYAHNVAAQGKYIAIASTTVETTDPEKEVEPALELLEPIDQK-FVAISDLYEP
        . :  .  .  .  .: :..  . :   :        : : :: . :: ::  ...   
CCDS14 -VRVIELCSSTMTCMKGTYLVHLTCTSSKT--------AREDLESVVQKLFVPYTEMEIE
         490       500       510               520       530       

     390       400       410       420       430       440         
pF1KB8 IDDGCESQVFCSCSYDATTHFETTCNDIKDIYKRMAGTAFDFENMKRKQNDVFGEAEQ  
                                                                   
CCDS14 NEQVEKPRILWALYFNMRDSSDISRSCYNDLPSNVYVCSGPDCGLGNDNAVKQAETLFQE
       540       550       560       570       580       590       




447 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 09:28:17 2016 done: Fri Nov  4 09:28:18 2016
 Total Scan time:  2.750 Total Display time:  0.020

Function used was FASTA [36.3.4 Apr, 2011]
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