GENSCAN 1.0	Date run:  4-Nov-116	Time: 09:01:25

Sequence gi568815593r:134928782_135133881 : 205100 bp : 47.54% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +   4085   4124   40                              -2.46
 1.01 Init +  14888  14932   45  1  0   68   74    74 0.284   2.69
 1.02 Intr +  20904  20942   39  2  0   92   77    40 0.663   1.72
 1.03 Intr +  30259  30339   81  0  0   93   88    48 0.923   5.13
 1.04 Term +  31805  31900   96  1  0  110   34    96 0.948   4.37
 1.05 PlyA +  39188  39193    6                               1.05

 2.00 Prom +  40980  41019   40                              -3.96
 2.01 Init +  43031  43141  111  1  0   68   50    71 0.107   1.51
 2.02 Intr +  67492  67731  240  0  0   73  100   489 0.979  46.35
 2.03 Term +  68973  69011   39  2  0   85   41     4 0.186  -7.41
 2.04 PlyA +  69590  69595    6                               1.05

 3.02 PlyA -  70380  70375    6                               1.05
 3.01 Sngl -  71897  71430  468  2  0   70   41   292 0.998  18.84
 3.00 Prom -  72889  72850   40                              -4.96

 4.02 PlyA -  73058  73053    6                               1.05
 4.01 Sngl -  74292  73894  399  0  0   88   44   360 0.932  27.86
 4.00 Prom -  74723  74684   40                             -10.74

 5.00 Prom +  74975  75014   40                             -12.68
 5.01 Init +  75131  75204   74  1  2   74   44   127 0.813   5.45
 5.02 Intr +  79160  79358  199  2  1   53   36   266 0.415  17.25
 5.03 Intr +  80060  80200  141  1  0   71   78   198 0.980  17.65
 5.04 Intr +  80590  80709  120  0  0  102  109   169 0.997  21.09
 5.05 Intr +  81592  81749  158  0  2  118   34   178 0.998  14.21
 5.06 Term +  82740  82842  103  0  1  107   37   157 0.901  10.25
 5.07 PlyA +  88682  88687    6                               1.05

 6.12 PlyA -  89422  89417    6                               1.05
 6.11 Term - 100540  99998  543  1  0  162   47  1128 0.999 110.37
 6.10 Intr - 101952 101902   51  0  0   73   94    42 0.840   2.40
 6.09 Intr - 102727 102495  233  2  2   89   88   398 0.996  37.39
 6.08 Intr - 105168 104932  237  1  0  111  115   292 0.913  31.79
 6.07 Intr - 106830 106774   57  1  0  104   94    29 0.841   3.96
 6.06 Intr - 107545 107398  148  1  1   54   52    40 0.166  -3.19
 6.05 Intr - 110254 110131  124  0  1   61   52   169 0.647  11.19
 6.04 Intr - 110633 110467  167  2  2   21   28   155 0.672   1.56
 6.03 Intr - 111047 110815  233  0  2   79   78   103 0.577   5.89
 6.02 Intr - 117111 116971  141  1  0  145   45    25 0.058   4.22
 6.01 Init - 121863 121710  154  0  1  104   41   139 0.279   9.07
 6.00 Prom - 125442 125403   40                              -5.66

 7.04 PlyA - 126137 126132    6                               1.05
 7.03 Term - 136952 136764  189  2  0  121   52   134 0.348  10.55
 7.02 Intr - 137473 137287  187  0  1   45   63   111 0.733   3.99
 7.01 Init - 140669 140512  158  2  2   93   63   106 0.833   8.02
 7.00 Prom - 154575 154536   40                              -2.46

 8.00 Prom + 161030 161069   40                              -6.06
 8.01 Init + 162690 162782   93  2  0  108   50    81 0.601   6.92
 8.02 Intr + 182043 182210  168  2  0   94   26    78 0.013   2.34
 8.03 Intr + 186189 186209   21  2  0   89  109    11 0.005   1.04
 8.04 Intr + 199217 199328  112  1  1   43   53    91 0.034   1.05
 8.05 Intr + 202421 202552  132  0  0  115   79    22 0.086   4.62
 8.06 Term + 204446 204528   83  0  2  108   45    51 0.032   0.66
 8.07 PlyA + 204661 204666    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  35785  35682  104  2  2   72   48    52 0.921  -1.96
S.002 Init + 116795 116882   88  1  1   90   64   155 0.916  14.10


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593r:134928782_135133881|GENSCAN_predicted_peptide_1|86_aa
MVLVKLSWVLCLLGPRLEQLTVFHVKVLAFGFMSRVALQAEKMNHHPEWFNVYNKVQITL
TSHDCGELTKKDVKLAKFIEKAAASV

>gi568815593r:134928782_135133881|GENSCAN_predicted_CDS_1|261_bp
atggtgttggtcaagttgtcttgggttctgtgccttctgggaccgcggctagaacagtta
acagtgttccacgtgaaagtcttggcatttggctttatgtcccgagttgccctacaagca
gagaagatgaatcatcacccagaatggttcaatgtatacaacaaggtccagataactctc
acctcacatgactgtggtgaactgaccaaaaaagatgtgaagctggccaagtttattgaa
aaagcagctgcttctgtgtga

>gi568815593r:134928782_135133881|GENSCAN_predicted_peptide_2|129_aa
MKEEKVQIKLEEEPGYLKNQATAFLNTTQKQKNELSEFSEIFFVSICTSELSMKVYVDPI
NYWKNGYNLLDVIIIIVMFLPYALRQLMGKQFTYLYIADGMQSLRILKLIGYSQGIRDPP
PAYPSLFDL

>gi568815593r:134928782_135133881|GENSCAN_predicted_CDS_2|390_bp
atgaaggaagagaaggttcagataaaattggaggaggaaccaggatacctcaaaaatcaa
gctactgcgtttttaaacacaacacaaaagcagaagaatgagctcagtgagttctcggag
atcttctttgtgtccatctgcacatctgagttgtccatgaaggtctatgtggaccccatc
aactactggaagaacggctacaacctgctggatgtgatcattatcatcgttatgttttta
ccctatgccctccgccagctcatgggcaaacagttcacttacctgtatatcgctgatggc
atgcagtccctgcgcatcctcaagcttatcggctatagccagggcatccgggaccctcca
cctgcctacccctctctctttgacctttag

>gi568815593r:134928782_135133881|GENSCAN_predicted_peptide_3|155_aa
MDKFLDTYTLPRLNQEEVESLNRPITGSEIEAVINSLPTKKTPGPDGFTAKFYQRYKEEL
VPFLLKLFQLIEKEGILPNSFYEANIILIPKPGKDTTKKENFRPISLMNINAKILNKILA
NRIQQHIKKLIHHDQVGFIPGMQGCILWDATYANQ

>gi568815593r:134928782_135133881|GENSCAN_predicted_CDS_3|468_bp
atggataaattcctggacacctacaccctcccaagactaaaccaggaagaagttgaatcc
ctgaatagaccaataacaggctctgaaattgaggcagtaattaatagcctaccaaccaaa
aaaactccaggaccagatggattcacagccaaattctaccagaggtacaaggaggagctg
gtaccattccttctgaaactattccaattgatagaaaaagagggaatcctccctaactca
ttttatgaggccaacatcatcctgataccaaagcctggcaaagacacaacaaaaaaagag
aattttagaccaatatccctgatgaacatcaatgcaaaaatcctcaataaaatactggca
aaccgaatccagcagcacatcaaaaagcttatccaccatgatcaagtgggcttcatccct
gggatgcaaggctgcatcctatgggacgcaacatatgcaaatcaataa

>gi568815593r:134928782_135133881|GENSCAN_predicted_peptide_4|132_aa
MGRNQSRKTENSKNQSTCPPPKERSSSPAMEQSWMENDFDELREEGFRRSNFSKLKEDVR
THHKEAKNLEKRLDKWLTRITSVEKALNDLTELKTMVRELRDACTSFSSRFNQLEERVSV
IEDQMNEMKREV

>gi568815593r:134928782_135133881|GENSCAN_predicted_CDS_4|399_bp
atggggagaaaccagagcagaaaaactgaaaattctaaaaatcagagcacctgtccccct
ccaaaggaacgcagctcctcaccagcaatggaacaaagctggatggagaatgactttgat
gagttgagagaagaaggcttcagacgatcaaacttctccaagctaaaggaggatgttcga
acccatcacaaagaagctaaaaaccttgaaaaaagattagacaaatggctaactagaata
accagtgtagagaaggccttaaatgacctgacggagctgaaaaccatggtacgagaacta
cgcgatgcatgcacaagcttcagtagccgattcaatcaactggaagaaagggtatcagtg
attgaagatcaaatgaatgaaatgaagcgagaagtttag

>gi568815593r:134928782_135133881|GENSCAN_predicted_peptide_5|264_aa
MPRPASALTQWAPPTVLHPLSDKPHVPALQTLITAVGQTVYTVASVLLLLFLLMYIFAIL
GFCLFGSPDNGDHDNWGNLAAAFFTLFSLATVDGWTDLQKQLDNREFALSRAFTIIFILL
ASFIFLNMFVGVMIMHTEDSIRKFERELMLEQQEMLMGEKQVILQRQQEEISRLMHIQKN
ADCTSFSELVENFKKTLSHTDPMVLDDFGTSLPFIDIYFSTLDYQDTTVHKLQELYYEIV
HVLSLMLEDLPQEKPQSLEKVDEK

>gi568815593r:134928782_135133881|GENSCAN_predicted_CDS_5|795_bp
atgcctcgccctgcttcggctctcactcagtgggctccacccactgtcctgcacccgctg
tccgacaagccccatgtccctgccttgcagacgctgatcaccgccgtggggcagacagtc
tacaccgtggcctctgtgctcctcctgctcttcctcctcatgtacatcttcgctatcttg
ggcttctgcctgtttggatctccagacaatggtgaccatgataactgggggaacctggct
gcagcttttttcaccctcttcagcttggccacggttgatggctggacagacctgcagaag
cagttggacaatcgggaatttgctttgagccgggcattcaccatcatcttcatcttgctc
gcctctttcatcttcctcaacatgttcgtgggtgtgatgatcatgcacacagaggactcc
atcagaaagtttgagcgagagctgatgttggagcagcaggagatgctcatgggagagaag
caggtgattctgcagcggcagcaggaggagatcagcaggctgatgcacatacagaaaaat
gctgactgcacaagtttcagtgagctggtggagaactttaagaagaccttgagccacact
gacccaatggtcttggatgattttggcactagcttacccttcatcgatatctacttttcc
actctggactaccaggacacaactgtccacaagcttcaagagctgtactatgagatcgtg
catgtgctgagcctaatgctggaagacttgccccaggagaagccccagtccttggaaaag
gtggatgagaagtag

>gi568815593r:134928782_135133881|GENSCAN_predicted_peptide_6|695_aa
MRLGTDARVRPWLLHGSPVAQRALQRAALDLRASTCCWATRHLARKSEAARSEKIKPRED
NQQGIQHLGAMETLLGASLGSSWQQGQEGTQGVVHLAPVSPPSPRATGGGGGRSGPSRGS
PGLARWDVANQQGPKNRAVPEPELDPGPQPEPKPEPESAAGEPGAHEPQTQRCPGGGTVI
AAVTGCYLTQPAGSTLCFGSGHLKRVAASGARATAPRRAQPEKPVAAPRSVGNAAEKQQT
SVRALALFAPDPDVPPQRSEVPPAQGSLLSPAQAVLFGKTAKKRMVCEGTLPSTLQHLNI
SLKGGIFYCRRLVVKVAKKHGNGRQSWRSSLGLLCLVELITGRSQGGGARPAPAPGAPAA
VPTSMDAFKGGMSLERLPEGLRPPPPPPHDMGPAFHLARPADPREPLENSASESSDTELP
EKERGGEPKGPEDSGAGGTGCGGADDPAKKKKQRRQRTHFTSQQLQELEATFQRNRYPDM
SMREEIAVWTNLTEPRVRPSVGPFAFCPFRKVSRQVWFKNRRAKWRKRERNQQLDLCKGG
YVPQFSGLVQPYEDVYAAGYSYNNWAAKSLAPAPLSTKSFTFFNSMSPLSSQSMFSAPSS
ISSMTMPSSMGPGAVPGMPNSGLNNINNLTGSSLNSAMSPGACPYGTPASPYSVYRDTCN
SSLASLRLKSKQHSSFGYGGLQGPASGLNACQYNS

>gi568815593r:134928782_135133881|GENSCAN_predicted_CDS_6|2088_bp
atgaggctggggacagacgcccgagtgcggccctggctgctccacggttctccggtggca
cagcgggctctgcaacgcgccgctctggacctgcgcgcgagcacctgctgctgggccacc
cggcacctcgcgcggaagagtgaggcggcgcgtagtgagaaaataaagcccagagaggac
aatcagcaaggaatccagcaccttggagccatggaaacccttcttggtgcctctttaggc
tcctcatggcagcaggggcaggagggcacacagggtgttgtgcacctagccccagtgtcc
ccgccttccccgcgggcgacgggcggcggcggcgggaggagcgggccgagccgaggaagc
cccggcctcgcgcgctgggatgtagcgaaccagcaggggccgaagaaccgtgcagtgcca
gagccagagctggatccggggccccagccggagccgaaacctgagccagagtccgcggcg
ggcgagcccggagcccacgagccgcagacgcagcgctgcccaggtgggggcacagtcata
gccgccgtcaccgggtgctacctcacccaaccggcgggatcaaccctctgctttggctcc
gggcacctcaagagggtagcagcctcgggggcacgggccacggccccgcgaagggcacaa
cctgagaagcccgtggcagcccctcgcagcgtcggcaatgccgcagaaaagcagcagacg
tcggtccgcgccctggctctcttcgccccggaccccgacgtcccgccgcagcgctcggag
gtgcccccagcccaaggcagcctgctctcgccggcacaggctgttctttttggtaagaca
gctaaaaaaagaatggtctgtgaagggacactccctagcacgctgcaacacctgaatatc
tccttgaaaggagggatcttctactgcaggagactcgtggtaaaggtggccaagaaacat
ggcaacggcagacaatcctggcgcagctcccttgggttgctgtgtctggtggagctgatc
acaggtcgcagccagggcggcggggcgcgcccagccccggcccctggagcgcccgccgcg
gtccccacctccatggacgccttcaaggggggcatgagcctggagcggctgccggagggg
ctccggccgccgccgccgccaccccatgacatggggcccgccttccacctggcccggccc
gccgacccccgcgagccgctcgagaactccgccagcgagtcgtctgacacggagctgcca
gagaaggagcgcggcggggaacccaaggggcccgaggacagtggtgcgggaggcacgggc
tgcggcggcgcagacgacccagccaagaagaagaagcagcggcggcaacgtacgcacttc
acaagccagcagttgcaagagctagaggccacgttccagaggaaccgctaccccgacatg
agcatgagggaggagatcgccgtgtggaccaacctcaccgagccgcgcgtgcggccatca
gtaggaccctttgccttctgccctttccggaaggtctcccgtcaggtctggttcaagaac
cggcgagccaagtggcgtaagcgcgagcgtaaccagcagctggacctgtgcaagggtggc
tacgtgccgcagttcagcggcctagtgcagccctacgaggacgtgtacgccgccggctac
tcctacaacaactgggccgccaagagcctggcgccagcgccgctctccaccaagagcttc
accttcttcaactccatgagcccgctgtcgtcgcagtccatgttctcagcacccagctcc
atctcctccatgaccatgccgtccagcatgggcccaggcgccgtgcctggcatgcccaac
tcgggcctcaacaacatcaacaacctcaccggctcctcgctcaactcggccatgtcgccg
ggcgcttgcccgtacggcactcccgcctcgccctacagcgtctaccgggacacgtgcaac
tcgagcctagccagcctgcggctcaagtccaaacagcactcgtcgtttggctacggcggc
ctgcagggcccggcctcgggcctcaacgcgtgccagtacaacagctga

>gi568815593r:134928782_135133881|GENSCAN_predicted_peptide_7|177_aa
MVAFQQSEEARPAPVTLLPHAGLLCMAGMAPEGGYQNSHCRSLHSQGQIIWAELPSKGQE
VPGEQLQPLPFLRTTGSQTSTAQPETQAQRQPTPTHCHLGELAGSAYEERLVHRLTPTLC
PGASPEGQQTFGKPIFGSQKIDSLHWQLELCFWQTPLNVLTEERPTVCSANASAQGS

>gi568815593r:134928782_135133881|GENSCAN_predicted_CDS_7|534_bp
atggtggccttccagcaaagtgaagaagcccggccagctcctgtgacgctcttgccccac
gcaggccttctctgcatggcgggcatggccccagaaggtggctaccaaaactcacactgc
cgttctctccacagccagggccagatcatctgggcagagctgcccagcaagggccaggag
gtgccaggagagcagctccagcctctgcccttcctccgtactactggttcgcagacctcc
acagcccaacctgagacccaggcccaacggcagcccactcccacacactgccacctggga
gagctggcaggctcagcctacgaggagcggctcgttcacaggctgactccaaccctttgc
cccggagcaagcccagaaggccagcagaccttcgggaagcccatctttggctcacagaaa
atagactcactccattggcagctggagctgtgcttctggcagaccccactgaatgtgctg
accgaggaaaggcctactgtgtgttcagccaatgccagtgctcaagggagctga

>gi568815593r:134928782_135133881|GENSCAN_predicted_peptide_8|202_aa
MDMVMVQAMQGHGEACAGFLEEEALKGWENPWLSLGSYPPIFTPSPAGICEFQGQLKVKL
YHVGDEMQADVARLADGGHTLRTVLSPLVEANLQKLVNRGHSRDHRQLAAGIAQAPCLLG
VSFRTQSMGFVGESQIEKDRDGGSVVWKLLPYGGHGKLFSLSNMMMMPITMSITEDTQLC
DSQDPSHQVQSRTGSVSSSAAQ

>gi568815593r:134928782_135133881|GENSCAN_predicted_CDS_8|609_bp
atggacatggtcatggtgcaggctatgcagggtcatggtgaagcctgtgcaggcttcctg
gaggaggaggccttgaagggttgggaaaacccttggctttcacttggctcctatcccccc
attttcaccccctcccctgctggaatttgtgaatttcaaggtcagctgaaagtcaagctt
taccatgttggtgatgaaatgcaagcagatgtggctcgtttggcggatggtggccacacc
ctgagaactgtgctcagtcctcttgtggaggcaaaccttcagaaattagtcaacagaggc
cattcccgggaccacaggcagctggctgcaggcattgcgcaggcgccgtgcctgctggga
gtgtcttttcggacacagagcatgggcttcgtgggtgagagccagatagagaaagacaga
gatggtggctctgtggtttggaagctcctcccatatggtggacatggaaagttgtttagt
ctgtctaatatgatgatgatgccgattaccatgagcatcactgaagacactcagctctgt
gacagccaggaccccagtcaccaggttcaaagccgcacaggtagtgtgtccagcagcgct
gcccagtga