Result of FASTA (omim) for pF1KB7611
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB7611, 302 aa
  1>>>pF1KB7611 302 - 302 aa - 302 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 8.8862+/-0.000349; mu= 2.3701+/- 0.022
 mean_var=309.5729+/-62.841, 0's: 0 Z-trim(124.4): 222  B-trim: 134 in 2/57
 Lambda= 0.072894
 statistics sampled from 45777 (46061) to 45777 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.834), E-opt: 0.2 (0.54), width:  16
 Scan time:  6.540

The best scores are:                                      opt bits E(85289)
NP_005020 (OMIM: 107250,602669,610623) pituitary h ( 302) 2058 229.0 8.8e-60
XP_011530329 (OMIM: 137600,180500,180550,601542,60 ( 271) 1011 118.9 1.1e-26
NP_001191328 (OMIM: 137600,180500,180550,601542,60 ( 271) 1011 118.9 1.1e-26
NP_700476 (OMIM: 137600,180500,180550,601542,60422 ( 271) 1011 118.9 1.1e-26
NP_001191327 (OMIM: 137600,180500,180550,601542,60 ( 317) 1010 118.9 1.4e-26
NP_001191326 (OMIM: 137600,180500,180550,601542,60 ( 317) 1010 118.9 1.4e-26
NP_700475 (OMIM: 137600,180500,180550,601542,60422 ( 317) 1010 118.9 1.4e-26
NP_000316 (OMIM: 137600,180500,180550,601542,60422 ( 324) 1008 118.7 1.6e-26
NP_002644 (OMIM: 119800,186550,602149) pituitary h ( 314)  801 96.9 5.6e-20
NP_620689 (OMIM: 300004,300215,300382,300419,30835 ( 562)  442 59.4 1.9e-08
NP_006483 (OMIM: 136760,606014) homeobox protein a ( 343)  366 51.2 3.5e-06
NP_005160 (OMIM: 602078,602753) paired mesoderm ho ( 284)  363 50.8 3.8e-06
NP_038463 (OMIM: 601881,611038) retinal homeobox p ( 346)  363 50.9 4.4e-06
NP_068745 (OMIM: 605420,609597,613451,615529) home ( 411)  364 51.0 4.5e-06
XP_011537084 (OMIM: 601527,613456) PREDICTED: ALX  ( 231)  342 48.4 1.6e-05
NP_008913 (OMIM: 601527,613456) ALX homeobox prote ( 326)  342 48.6 1.9e-05
NP_055377 (OMIM: 600036) homeobox protein OTX1 [Ho ( 354)  340 48.4 2.4e-05
NP_001186699 (OMIM: 600036) homeobox protein OTX1  ( 354)  340 48.4 2.4e-05
NP_001306003 (OMIM: 605726,610362,610381,613757) r ( 230)  336 47.8 2.4e-05
NP_001128726 (OMIM: 167410,268220) paired box prot ( 505)  342 48.8 2.6e-05
NP_039236 (OMIM: 167410,268220) paired box protein ( 518)  342 48.9 2.6e-05
NP_002575 (OMIM: 167410,268220) paired box protein ( 520)  342 48.9 2.6e-05
NP_757379 (OMIM: 607410) diencephalon/mesencephalo ( 377)  338 48.3 2.9e-05
XP_016855778 (OMIM: 607410) PREDICTED: diencephalo ( 377)  338 48.3 2.9e-05
XP_011538970 (OMIM: 607410) PREDICTED: diencephalo ( 377)  338 48.3 2.9e-05
NP_671725 (OMIM: 607410) diencephalon/mesencephalo ( 382)  338 48.3 2.9e-05
NP_852125 (OMIM: 122880,148820,193500,268220,60659 ( 407)  335 48.0 3.7e-05
NP_852126 (OMIM: 122880,148820,193500,268220,60659 ( 403)  332 47.7 4.6e-05
NP_001263380 (OMIM: 606701) dorsal root ganglia ho ( 263)  328 47.0 4.7e-05
NP_115485 (OMIM: 604529) homeobox protein orthoped ( 325)  329 47.2   5e-05
NP_852122 (OMIM: 122880,148820,193500,268220,60659 ( 479)  332 47.8 5.2e-05
NP_001120838 (OMIM: 122880,148820,193500,268220,60 ( 483)  332 47.8 5.2e-05
NP_852123 (OMIM: 122880,148820,193500,268220,60659 ( 484)  332 47.8 5.2e-05
NP_852124 (OMIM: 122880,148820,193500,268220,60659 ( 505)  332 47.8 5.4e-05
NP_057391 (OMIM: 604675) paired mesoderm homeobox  ( 253)  322 46.4 7.1e-05
NP_703149 (OMIM: 300154) homeobox protein ESX1 [Ho ( 406)  325 46.9 7.7e-05
XP_016870292 (OMIM: 604675) PREDICTED: paired meso ( 193)  317 45.7 8.6e-05
NP_001257454 (OMIM: 600037,610125,613986) homeobox ( 297)  318 46.0 0.00011
NP_068374 (OMIM: 600037,610125,613986) homeobox pr ( 297)  318 46.0 0.00011
NP_001257452 (OMIM: 600037,610125,613986) homeobox ( 289)  310 45.2 0.00019
NP_758840 (OMIM: 600037,610125,613986) homeobox pr ( 289)  310 45.2 0.00019
NP_001257453 (OMIM: 600037,610125,613986) homeobox ( 289)  310 45.2 0.00019
NP_001297088 (OMIM: 106210,120430,136520,148190,16 ( 401)  312 45.6  0.0002
NP_116142 (OMIM: 605726,610362,610381,613757) reti ( 184)  303 44.2 0.00023
NP_001290437 (OMIM: 612019) intestine-specific hom ( 245)  304 44.5 0.00026
NP_003915 (OMIM: 209880,603851,613013) paired meso ( 314)  305 44.7 0.00028
NP_005306 (OMIM: 601845) homeobox protein goosecoi ( 205)  284 42.3 0.00099
NP_001297090 (OMIM: 106210,120430,136520,148190,16 ( 286)  286 42.7  0.0011
NP_001297089 (OMIM: 106210,120430,136520,148190,16 ( 286)  286 42.7  0.0011
NP_000545 (OMIM: 120970,268000,602225,613829) cone ( 299)  284 42.5  0.0013


>>NP_005020 (OMIM: 107250,602669,610623) pituitary homeo  (302 aa)
 initn: 2058 init1: 2058 opt: 2058  Z-score: 1194.3  bits: 229.0 E(85289): 8.8e-60
Smith-Waterman score: 2058; 100.0% identity (100.0% similar) in 302 aa overlap (1-302:1-302)

               10        20        30        40        50        60
pF1KB7 MEFGLLSEAEARSPALSLSDAGTPHPQLPEHGCKGQEHSDSEKASASLPGGSPEDGSLKK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MEFGLLSEAEARSPALSLSDAGTPHPQLPEHGCKGQEHSDSEKASASLPGGSPEDGSLKK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 KQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 KQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKR
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 ERSQQAELCKGSFAAPLGGLVPPYEEVYPGYSYGNWPPKALAPPLAAKTFPFAFNSVNVG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 ERSQQAELCKGSFAAPLGGLVPPYEEVYPGYSYGNWPPKALAPPLAAKTFPFAFNSVNVG
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB7 PLASQPVFSPPSSIAASMVPSAAAAPGTVPGPGALQGLGGGPPGLAPAAVSSGAVSCPYA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 PLASQPVFSPPSSIAASMVPSAAAAPGTVPGPGALQGLGGGPPGLAPAAVSSGAVSCPYA
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB7 SAAAAAAAAASSPYVYRDPCNSSLASLRLKAKQHASFSYPAVHGPPPAANLSPCQYAVER
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 SAAAAAAAAASSPYVYRDPCNSSLASLRLKAKQHASFSYPAVHGPPPAANLSPCQYAVER
              250       260       270       280       290       300

         
pF1KB7 PV
       ::
NP_005 PV
         

>>XP_011530329 (OMIM: 137600,180500,180550,601542,604229  (271 aa)
 initn: 1012 init1: 712 opt: 1011  Z-score: 599.8  bits: 118.9 E(85289): 1.1e-26
Smith-Waterman score: 1011; 61.0% identity (79.8% similar) in 277 aa overlap (33-302:12-271)

             10        20        30        40        50        60  
pF1KB7 FGLLSEAEARSPALSLSDAGTPHPQLPEHGCKGQEHSDSEKASASLPGGSPEDGSLKKKQ
                                     :   :.. :....    :.  :: : ::.:
XP_011                    METNCRKLVSACVQLEKDKSQQGKNEDVGA--EDPSKKKRQ
                                  10        20        30           

             70        80        90       100       110       120  
pF1KB7 RRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRER
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRER
      40        50        60        70        80        90         

            130       140       150       160        170       180 
pF1KB7 SQQAELCKGSFAAPLGGLVPPYEEVYPGYSYGNWPPKAL-APPLAAKTFPFAFNSVNVGP
       .:::::::..:.  ..::. ::...::::::.::  :.: .  :..:.::: :::.::.:
XP_011 NQQAELCKNGFGPQFNGLMQPYDDMYPGYSYNNWAAKGLTSASLSTKSFPF-FNSMNVNP
     100       110       120       130       140       150         

             190       200       210         220           230     
pF1KB7 LASQPVFSPPSSIAASMVPSAAAAPGTVPG-PGA-LQGLGG----GPPGLAPAAVSSGAV
       :.:: .::::.::. ::  :.. .:..: : ::. :..:..    . :.:  .:: . : 
XP_011 LSSQSMFSPPNSIS-SMSMSSSMVPSAVTGVPGSSLNSLNNLNNLSSPSLN-SAVPTPA-
      160       170        180       190       200        210      

         240       250       260       270       280       290     
pF1KB7 SCPYASAAAAAAAAASSPYVYRDPCNSSLASLRLKAKQHASFSYPAVHGPPPAANLSPCQ
        ::::          . :::::: :::::::::::::::.::.: .:..:  :.::: ::
XP_011 -CPYAPP--------TPPYVYRDTCNSSLASLRLKAKQHSSFGYASVQNP--ASNLSACQ
          220               230       240       250         260    

         300  
pF1KB7 YAVERPV
       :::.:::
XP_011 YAVDRPV
          270 

>>NP_001191328 (OMIM: 137600,180500,180550,601542,604229  (271 aa)
 initn: 1012 init1: 712 opt: 1011  Z-score: 599.8  bits: 118.9 E(85289): 1.1e-26
Smith-Waterman score: 1011; 61.0% identity (79.8% similar) in 277 aa overlap (33-302:12-271)

             10        20        30        40        50        60  
pF1KB7 FGLLSEAEARSPALSLSDAGTPHPQLPEHGCKGQEHSDSEKASASLPGGSPEDGSLKKKQ
                                     :   :.. :....    :.  :: : ::.:
NP_001                    METNCRKLVSACVQLEKDKSQQGKNEDVGA--EDPSKKKRQ
                                  10        20        30           

             70        80        90       100       110       120  
pF1KB7 RRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRER
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRER
      40        50        60        70        80        90         

            130       140       150       160        170       180 
pF1KB7 SQQAELCKGSFAAPLGGLVPPYEEVYPGYSYGNWPPKAL-APPLAAKTFPFAFNSVNVGP
       .:::::::..:.  ..::. ::...::::::.::  :.: .  :..:.::: :::.::.:
NP_001 NQQAELCKNGFGPQFNGLMQPYDDMYPGYSYNNWAAKGLTSASLSTKSFPF-FNSMNVNP
     100       110       120       130       140       150         

             190       200       210         220           230     
pF1KB7 LASQPVFSPPSSIAASMVPSAAAAPGTVPG-PGA-LQGLGG----GPPGLAPAAVSSGAV
       :.:: .::::.::. ::  :.. .:..: : ::. :..:..    . :.:  .:: . : 
NP_001 LSSQSMFSPPNSIS-SMSMSSSMVPSAVTGVPGSSLNSLNNLNNLSSPSLN-SAVPTPA-
      160       170        180       190       200        210      

         240       250       260       270       280       290     
pF1KB7 SCPYASAAAAAAAAASSPYVYRDPCNSSLASLRLKAKQHASFSYPAVHGPPPAANLSPCQ
        ::::          . :::::: :::::::::::::::.::.: .:..:  :.::: ::
NP_001 -CPYAPP--------TPPYVYRDTCNSSLASLRLKAKQHSSFGYASVQNP--ASNLSACQ
          220               230       240       250         260    

         300  
pF1KB7 YAVERPV
       :::.:::
NP_001 YAVDRPV
          270 

>>NP_700476 (OMIM: 137600,180500,180550,601542,604229) p  (271 aa)
 initn: 1012 init1: 712 opt: 1011  Z-score: 599.8  bits: 118.9 E(85289): 1.1e-26
Smith-Waterman score: 1011; 61.0% identity (79.8% similar) in 277 aa overlap (33-302:12-271)

             10        20        30        40        50        60  
pF1KB7 FGLLSEAEARSPALSLSDAGTPHPQLPEHGCKGQEHSDSEKASASLPGGSPEDGSLKKKQ
                                     :   :.. :....    :.  :: : ::.:
NP_700                    METNCRKLVSACVQLEKDKSQQGKNEDVGA--EDPSKKKRQ
                                  10        20        30           

             70        80        90       100       110       120  
pF1KB7 RRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRER
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_700 RRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRER
      40        50        60        70        80        90         

            130       140       150       160        170       180 
pF1KB7 SQQAELCKGSFAAPLGGLVPPYEEVYPGYSYGNWPPKAL-APPLAAKTFPFAFNSVNVGP
       .:::::::..:.  ..::. ::...::::::.::  :.: .  :..:.::: :::.::.:
NP_700 NQQAELCKNGFGPQFNGLMQPYDDMYPGYSYNNWAAKGLTSASLSTKSFPF-FNSMNVNP
     100       110       120       130       140       150         

             190       200       210         220           230     
pF1KB7 LASQPVFSPPSSIAASMVPSAAAAPGTVPG-PGA-LQGLGG----GPPGLAPAAVSSGAV
       :.:: .::::.::. ::  :.. .:..: : ::. :..:..    . :.:  .:: . : 
NP_700 LSSQSMFSPPNSIS-SMSMSSSMVPSAVTGVPGSSLNSLNNLNNLSSPSLN-SAVPTPA-
      160       170        180       190       200        210      

         240       250       260       270       280       290     
pF1KB7 SCPYASAAAAAAAAASSPYVYRDPCNSSLASLRLKAKQHASFSYPAVHGPPPAANLSPCQ
        ::::          . :::::: :::::::::::::::.::.: .:..:  :.::: ::
NP_700 -CPYAPP--------TPPYVYRDTCNSSLASLRLKAKQHSSFGYASVQNP--ASNLSACQ
          220               230       240       250         260    

         300  
pF1KB7 YAVERPV
       :::.:::
NP_700 YAVDRPV
          270 

>>NP_001191327 (OMIM: 137600,180500,180550,601542,604229  (317 aa)
 initn: 1012 init1: 712 opt: 1010  Z-score: 598.4  bits: 118.9 E(85289): 1.4e-26
Smith-Waterman score: 1010; 61.1% identity (80.4% similar) in 275 aa overlap (35-302:59-317)

           10        20        30        40        50        60    
pF1KB7 LLSEAEARSPALSLSDAGTPHPQLPEHGCKGQEHSDSEKASASLPGGSPEDGSLKKKQRR
                                     : ...:. . . .   :. :: : ::.:::
NP_001 DSEIKKVEFTDSPESRKEAASSKFFPRQHPGANEKDKSQQGKNEDVGA-EDPSKKKRQRR
       30        40        50        60        70         80       

           70        80        90       100       110       120    
pF1KB7 QRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRERSQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:
NP_001 QRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRERNQ
        90       100       110       120       130       140       

          130       140       150       160        170       180   
pF1KB7 QAELCKGSFAAPLGGLVPPYEEVYPGYSYGNWPPKAL-APPLAAKTFPFAFNSVNVGPLA
       ::::::..:.  ..::. ::...::::::.::  :.: .  :..:.::: :::.::.::.
NP_001 QAELCKNGFGPQFNGLMQPYDDMYPGYSYNNWAAKGLTSASLSTKSFPF-FNSMNVNPLS
       150       160       170       180       190        200      

           190       200       210         220           230       
pF1KB7 SQPVFSPPSSIAASMVPSAAAAPGTVPG-PGA-LQGLGG----GPPGLAPAAVSSGAVSC
       :: .::::.::. ::  :.. .:..: : ::. :..:..    . :.:  .:: . :  :
NP_001 SQSMFSPPNSIS-SMSMSSSMVPSAVTGVPGSSLNSLNNLNNLSSPSLN-SAVPTPA--C
        210        220       230       240       250        260    

       240       250       260       270       280       290       
pF1KB7 PYASAAAAAAAAASSPYVYRDPCNSSLASLRLKAKQHASFSYPAVHGPPPAANLSPCQYA
       :::          . :::::: :::::::::::::::.::.: .:..:  :.::: ::::
NP_001 PYAPP--------TPPYVYRDTCNSSLASLRLKAKQHSSFGYASVQNP--ASNLSACQYA
                    270       280       290       300         310  

       300  
pF1KB7 VERPV
       :.:::
NP_001 VDRPV
            

>>NP_001191326 (OMIM: 137600,180500,180550,601542,604229  (317 aa)
 initn: 1012 init1: 712 opt: 1010  Z-score: 598.4  bits: 118.9 E(85289): 1.4e-26
Smith-Waterman score: 1010; 61.1% identity (80.4% similar) in 275 aa overlap (35-302:59-317)

           10        20        30        40        50        60    
pF1KB7 LLSEAEARSPALSLSDAGTPHPQLPEHGCKGQEHSDSEKASASLPGGSPEDGSLKKKQRR
                                     : ...:. . . .   :. :: : ::.:::
NP_001 DSEIKKVEFTDSPESRKEAASSKFFPRQHPGANEKDKSQQGKNEDVGA-EDPSKKKRQRR
       30        40        50        60        70         80       

           70        80        90       100       110       120    
pF1KB7 QRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRERSQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:
NP_001 QRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRERNQ
        90       100       110       120       130       140       

          130       140       150       160        170       180   
pF1KB7 QAELCKGSFAAPLGGLVPPYEEVYPGYSYGNWPPKAL-APPLAAKTFPFAFNSVNVGPLA
       ::::::..:.  ..::. ::...::::::.::  :.: .  :..:.::: :::.::.::.
NP_001 QAELCKNGFGPQFNGLMQPYDDMYPGYSYNNWAAKGLTSASLSTKSFPF-FNSMNVNPLS
       150       160       170       180       190        200      

           190       200       210         220           230       
pF1KB7 SQPVFSPPSSIAASMVPSAAAAPGTVPG-PGA-LQGLGG----GPPGLAPAAVSSGAVSC
       :: .::::.::. ::  :.. .:..: : ::. :..:..    . :.:  .:: . :  :
NP_001 SQSMFSPPNSIS-SMSMSSSMVPSAVTGVPGSSLNSLNNLNNLSSPSLN-SAVPTPA--C
        210        220       230       240       250        260    

       240       250       260       270       280       290       
pF1KB7 PYASAAAAAAAAASSPYVYRDPCNSSLASLRLKAKQHASFSYPAVHGPPPAANLSPCQYA
       :::          . :::::: :::::::::::::::.::.: .:..:  :.::: ::::
NP_001 PYAPP--------TPPYVYRDTCNSSLASLRLKAKQHSSFGYASVQNP--ASNLSACQYA
                    270       280       290       300         310  

       300  
pF1KB7 VERPV
       :.:::
NP_001 VDRPV
            

>>NP_700475 (OMIM: 137600,180500,180550,601542,604229) p  (317 aa)
 initn: 1012 init1: 712 opt: 1010  Z-score: 598.4  bits: 118.9 E(85289): 1.4e-26
Smith-Waterman score: 1010; 61.1% identity (80.4% similar) in 275 aa overlap (35-302:59-317)

           10        20        30        40        50        60    
pF1KB7 LLSEAEARSPALSLSDAGTPHPQLPEHGCKGQEHSDSEKASASLPGGSPEDGSLKKKQRR
                                     : ...:. . . .   :. :: : ::.:::
NP_700 DSEIKKVEFTDSPESRKEAASSKFFPRQHPGANEKDKSQQGKNEDVGA-EDPSKKKRQRR
       30        40        50        60        70         80       

           70        80        90       100       110       120    
pF1KB7 QRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRERSQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:
NP_700 QRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRERNQ
        90       100       110       120       130       140       

          130       140       150       160        170       180   
pF1KB7 QAELCKGSFAAPLGGLVPPYEEVYPGYSYGNWPPKAL-APPLAAKTFPFAFNSVNVGPLA
       ::::::..:.  ..::. ::...::::::.::  :.: .  :..:.::: :::.::.::.
NP_700 QAELCKNGFGPQFNGLMQPYDDMYPGYSYNNWAAKGLTSASLSTKSFPF-FNSMNVNPLS
       150       160       170       180       190        200      

           190       200       210         220           230       
pF1KB7 SQPVFSPPSSIAASMVPSAAAAPGTVPG-PGA-LQGLGG----GPPGLAPAAVSSGAVSC
       :: .::::.::. ::  :.. .:..: : ::. :..:..    . :.:  .:: . :  :
NP_700 SQSMFSPPNSIS-SMSMSSSMVPSAVTGVPGSSLNSLNNLNNLSSPSLN-SAVPTPA--C
        210        220       230       240       250        260    

       240       250       260       270       280       290       
pF1KB7 PYASAAAAAAAAASSPYVYRDPCNSSLASLRLKAKQHASFSYPAVHGPPPAANLSPCQYA
       :::          . :::::: :::::::::::::::.::.: .:..:  :.::: ::::
NP_700 PYAPP--------TPPYVYRDTCNSSLASLRLKAKQHSSFGYASVQNP--ASNLSACQYA
                    270       280       290       300         310  

       300  
pF1KB7 VERPV
       :.:::
NP_700 VDRPV
            

>>NP_000316 (OMIM: 137600,180500,180550,601542,604229) p  (324 aa)
 initn: 932 init1: 712 opt: 1008  Z-score: 597.2  bits: 118.7 E(85289): 1.6e-26
Smith-Waterman score: 1013; 56.9% identity (77.6% similar) in 304 aa overlap (6-302:47-324)

                                        10        20        30     
pF1KB7                          MEFGLLSEAEARSPALSLSDAGTPHPQLPEHGCKG
                                     :. .. :  . ..::...:.    ... .:
NP_000 TKLSAVSSSSCHHPQPLAMASVLAPGQPRSLDSSKHRLEVHTISDTSSPEAAEKDKSQQG
         20        30        40        50        60        70      

          40        50        60        70        80        90     
pF1KB7 QEHSDSEKASASLPGGSPEDGSLKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEI
       .    .: ..:       :: : ::.::::::::::::::::::::::::::::::::::
NP_000 K----NEDVGA-------EDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEI
             80               90       100       110       120     

         100       110       120       130       140       150     
pF1KB7 AVWTNLTEARVRVWFKNRRAKWRKRERSQQAELCKGSFAAPLGGLVPPYEEVYPGYSYGN
       :::::::::::::::::::::::::::.:::::::..:.  ..::. ::...::::::.:
NP_000 AVWTNLTEARVRVWFKNRRAKWRKRERNQQAELCKNGFGPQFNGLMQPYDDMYPGYSYNN
         130       140       150       160       170       180     

         160        170       180       190       200       210    
pF1KB7 WPPKAL-APPLAAKTFPFAFNSVNVGPLASQPVFSPPSSIAASMVPSAAAAPGTVPG-PG
       :  :.: .  :..:.::: :::.::.::.:: .::::.::. ::  :.. .:..: : ::
NP_000 WAAKGLTSASLSTKSFPF-FNSMNVNPLSSQSMFSPPNSIS-SMSMSSSMVPSAVTGVPG
         190       200        210       220        230       240   

            220           230       240       250       260        
pF1KB7 A-LQGLGG----GPPGLAPAAVSSGAVSCPYASAAAAAAAAASSPYVYRDPCNSSLASLR
       . :..:..    . :.:  .:: . :  ::::          . :::::: :::::::::
NP_000 SSLNSLNNLNNLSSPSLN-SAVPTPA--CPYAPP--------TPPYVYRDTCNSSLASLR
           250       260          270               280       290  

      270       280       290       300  
pF1KB7 LKAKQHASFSYPAVHGPPPAANLSPCQYAVERPV
       ::::::.::.: .:..:  :.::: :::::.:::
NP_000 LKAKQHSSFGYASVQNP--ASNLSACQYAVDRPV
            300         310       320    

>>NP_002644 (OMIM: 119800,186550,602149) pituitary homeo  (314 aa)
 initn: 841 init1: 558 opt: 801  Z-score: 479.7  bits: 96.9 E(85289): 5.6e-20
Smith-Waterman score: 969; 56.3% identity (75.3% similar) in 300 aa overlap (3-296:31-312)

                                           10        20        30  
pF1KB7                             MEFGLLSEAEARSPALSLSDAGTPHPQLPEHG
                                     : :   :. : : :  : . .   .:::. 
NP_002 MDAFKGGMSLERLPEGLRPPPPPPHDMGPAFHLARPADPREP-LENSASESSDTELPEKE
               10        20        30        40         50         

             40        50         60        70        80        90 
pF1KB7 CKGQEHSDSEKASASLPG-GSPEDGSLKKKQRRQRTHFTSQQLQELEATFQRNRYPDMST
        .: : .  : ..:.  : :. .: . :::::::::::::::::::::::::::::::: 
NP_002 -RGGEPKGPEDSGAGGTGCGGADDPAKKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSM
       60        70        80        90       100       110        

             100       110       120       130       140        150
pF1KB7 REEIAVWTNLTEARVRVWFKNRRAKWRKRERSQQAELCKGSFAAPLGGLVPPYEEVYP-G
       :::::::::::: ::::::::::::::::::.:: .::::...  ..::: :::.::  :
NP_002 REEIAVWTNLTEPRVRVWFKNRRAKWRKRERNQQLDLCKGGYVPQFSGLVQPYEDVYAAG
      120       130       140       150       160       170        

              160        170       180       190       200         
pF1KB7 YSYGNWPPKALAP-PLAAKTFPFAFNSVNVGPLASQPVFSPPSSIAASMVPSAAAAPGTV
       :::.::  :.::: ::..:.: : :::..  ::.:: .:: ::::..  .::. . ::.:
NP_002 YSYNNWAAKSLAPAPLSTKSFTF-FNSMS--PLSSQSMFSAPSSISSMTMPSSMG-PGAV
      180       190       200          210       220       230     

     210         220       230       240       250        260      
pF1KB7 PG-PGA-LQGLGGGPPGLAPAAVSSGAVSCPYASAAAAAAAAASSPY-VYRDPCNSSLAS
       :: :.. :.....   .   .:.: ::  :::.. :        ::: :::: :::::::
NP_002 PGMPNSGLNNINNLTGSSLNSAMSPGA--CPYGTPA--------SPYSVYRDTCNSSLAS
          240       250       260                 270       280    

        270       280       290       300  
pF1KB7 LRLKAKQHASFSYPAVHGPPPAANLSPCQYAVERPV
       ::::.:::.::.: ...:  ::..:. :::      
NP_002 LRLKSKQHSSFGYGGLQG--PASGLNACQYNS    
          290       300         310        

>>NP_620689 (OMIM: 300004,300215,300382,300419,308350,30  (562 aa)
 initn: 385 init1: 329 opt: 442  Z-score: 272.7  bits: 59.4 E(85289): 1.9e-08
Smith-Waterman score: 445; 36.2% identity (61.0% similar) in 287 aa overlap (9-276:273-544)

                                     10        20           30     
pF1KB7                       MEFGLLSEAEARSPALSLSDAG---TPHPQLPEHGCKG
                                     : : . : ...  :   .:. .:  :  . 
NP_620 LLEDDEEELLEDDARALLKEPRRCPVAATGAVAAAAAAAVATEGGELSPKEELLLHP-ED
            250       260       270       280       290        300 

          40        50        60        70        80        90     
pF1KB7 QEHSDSEKASASLPGGSPEDGSLKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEI
        : .:.: .     :.. :.: ::.:::: :: ::: ::.::: .::...:::. ::::.
NP_620 AEGKDGEDSVCLSAGSDSEEGLLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREEL
             310       320       330       340       350       360 

         100       110       120       130        140         150  
pF1KB7 AVWTNLTEARVRVWFKNRRAKWRKRERSQQAELCKG-SFAAPLGGLVP--PYEEVYPGYS
       :.  .::::::.:::.::::::::::..       :  : .::..  :  :: .. :   
NP_620 AMRLDLTEARVQVWFQNRRAKWRKREKAGAQTHPPGLPFPGPLSATHPLSPYLDASP---
             370       380       390       400       410           

            160       170       180       190       200        210 
pF1KB7 YGNWPPKALAPPLAAKTFPFAFNSVNVGPLASQPVFSPPSSIAASMVPSAAAAP-GTVPG
          .::.   : : .     :.... ..  :. : . :: . .::. ::.:    .:  :
NP_620 ---FPPHH--PALDS-----AWTAAAAAAAAAFPSLPPPPG-SASLPPSGAPLGLSTFLG
         420              430       440        450       460       

             220              230            240       250         
pF1KB7 PGALQGLGGGPPG-------LAPAAVSSGAVS-----CPYASAAAAAAAAASSPYVYRDP
        ....  .   :.       .:: . .: :..      : . .:.:..: :.   .  : 
NP_620 AAVFRHPAFISPAFGRLFSTMAPLTSASTAAALLRQPTPAVEGAVASGALADPATAAADR
       470       480       490       500       510       520       

     260       270       280       290       300  
pF1KB7 CNSSLASLRLKAKQHASFSYPAVHGPPPAANLSPCQYAVERPV
         ::.:.::::::.::.                          
NP_620 RASSIAALRLKAKEHAAQLTQLNILPGTSTGKEVC        
       530       540       550       560          




302 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 08:57:23 2016 done: Fri Nov  4 08:57:24 2016
 Total Scan time:  6.540 Total Display time:  0.020

Function used was FASTA [36.3.4 Apr, 2011]
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