GENSCAN 1.0	Date run:  4-Nov-116	Time: 08:44:38

Sequence gi568815578r:17924639_18157634 : 232996 bp : 44.90% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   4334   4377   44  1  2   78   93    42 0.141   3.59
 1.02 Intr +  14581  14677   97  1  1   82   91    76 0.459   7.31
 1.03 Intr +  15402  15552  151  2  1   69  103    14 0.369   0.74
 1.04 Term +  18857  18984  128  0  2   72   42    73 0.371  -0.46
 1.05 PlyA +  19434  19439    6                               1.05

 2.12 PlyA -  19919  19914    6                              -0.45
 2.11 Term -  23007  22843  165  0  0   77   53   181 0.967  11.42
 2.10 Intr -  24338  24252   87  2  0   89   97   127 0.999  13.87
 2.09 Intr -  24465  24426   40  2  1   75   86     6 0.927  -2.67
 2.08 Intr -  25569  25494   76  1  1   92  106    55 0.987   6.27
 2.07 Intr -  25758  25653  106  0  1  109   33    68 0.984   3.19
 2.06 Intr -  26957  26862   96  2  0   87  115    48 0.994   7.61
 2.05 Intr -  28072  27949  124  0  1   72   67    55 0.993   2.39
 2.04 Intr -  29479  29358  122  1  2   69   94   221 0.998  20.09
 2.03 Intr -  30837  30727  111  0  0  113   68    51 0.985   6.18
 2.02 Intr -  32399  32295  105  2  0   19  115   110 0.963   7.21
 2.01 Init -  38206  38150   57  1  0   65  111   -37 0.303  -2.11
 2.00 Prom -  39789  39750   40                              -7.06

 3.00 Prom +  43423  43462   40                              -6.26
 3.01 Init +  43631  44302  672  1  0   73   63   236 0.608  14.79
 3.02 Intr +  45336  45492  157  2  1    8  100   124 0.596   5.18
 3.03 Intr +  51046  51265  220  2  1  131   89   107 0.739  12.46
 3.04 Intr +  63528  63660  133  0  1   69   71    91 0.972   6.15
 3.05 Term +  65301  65471  171  2  0   73   50   188 0.999  11.33
 3.06 PlyA +  66024  66029    6                               1.05

 4.00 Prom +  66055  66094   40                              -6.26
 4.01 Init +  87318  87571  254  2  2   67   21   509 0.727  38.91
 4.02 Term +  89310  89499  190  0  1   96   51    90 0.933   3.02
 4.03 PlyA +  90347  90352    6                               1.05

 5.06 PlyA -  93763  93758    6                               1.05
 5.05 Term - 100314  99998  317  1  2  101   55   490 0.616  42.10
 5.04 Intr - 117085 116896  190  1  1  114   99   325 0.491  35.36
 5.03 Intr - 118490 118398   93  2  0   62   66    48 0.235   0.16
 5.02 Intr - 132239 132019  221  0  2   68   79   411 0.152  36.22
 5.01 Init - 132996 132897  100  0  1  104   99   121 0.977  15.24
 5.00 Prom - 144465 144426   40                              -3.76

 6.00 Prom + 185714 185753   40                              -2.86
 6.01 Init + 201388 202514 1127  0  2   60   41   339 0.070  20.07
 6.02 Intr + 213179 213413  235  2  1   59   67   216 0.048  14.29
 6.03 Term + 217570 217719  150  0  0   88   38   119 0.324   4.81
 6.04 PlyA + 217838 217843    6                               1.05

 7.00 Prom + 217850 217889   40                             -13.15
 7.01 Init + 218023 218281  259  0  1   66   72   327 0.965  26.20
 7.02 Intr + 220595 220713  119  0  2  126   89    16 0.927   5.68
 7.03 Intr + 226183 226304  122  0  2  119   63    42 0.226   4.09

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr +  72836  72960  125  2  2   92   90    70 0.822   7.83


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815578r:17924639_18157634|GENSCAN_predicted_peptide_1|139_aa
MRSLSTGSVAGVCQRQKADGARFPSKRKSPFTELSLGITTKKPHKEKQDSCGFPPDAVPP
AAKCLPAFPGLSTPHRSQSASKPIPPPQTTMNAPSHTGTSDWEQGWSMGGGEPHTSPMAC
ENASQKKTYQVHANNVQQH

>gi568815578r:17924639_18157634|GENSCAN_predicted_CDS_1|420_bp
atgaggagcctatccacgggatcagttgctggtgtttgccaaaggcagaaagcggatggt
gcaaggtttccttccaaacggaaatcgcccttcacagagctgagcctgggaattaccaca
aagaaacctcacaaagaaaagcaagatagctgtggattcccacctgatgctgttcctcct
gctgccaagtgcctgcctgcctttccaggtctcagcacaccacacaggtcgcagtcagca
tctaaacccatccccccaccccagaccactatgaatgcaccctcacatacaggtaccagt
gactgggaacagggctggagtatgggtggtggtgagccacatacttcaccaatggcttgt
gaaaatgcttctcaaaagaagacataccaggttcatgcaaacaacgttcagcagcactag

>gi568815578r:17924639_18157634|GENSCAN_predicted_peptide_2|362_aa
MPCSLQCSTVNCLCVGRLPLRSVSVDLNVDPSLQIDIPDALSERDKVKFTVHTKTTLPTF
QSPEFSVTRQHEDFVWLHDTLIETTDYAGLIIPPAPTKPDFDGPREKMQKLGEGEGSMTK
EEFAKMKQELEAEYLAVFKKTVSSHEVFLQRLSSHPVLSKDRNFHVFLEYDQDLSVRRKN
TKEMFGGFFKSVVKSADEVLFTGVKEVDDFFEQEKNFLINYYNRIKDSCVKADKMTRSHK
NVADDYIHTAACLHSLALEEPTVIKKYLLKVAELFEKLRKVEGRVSSDEDLKLTELLRYY
MLNIEAAKDLLYRRTKALIDYENSNKALDKARLKSKDVKLAEAHQQECCQKFEQLSESAK
EG

>gi568815578r:17924639_18157634|GENSCAN_predicted_CDS_2|1089_bp
atgccctgcagtctgcagtgttctactgtgaactgcttgtgtgttggcaggctaccgctg
agatctgtatctgtggacctgaatgttgatccctcgcttcagattgacatacctgatgcg
ctcagtgagagagacaaagtcaaatttacagtgcacacaaagaccacactgcccacgttt
cagagcccagagttttctgttacaaggcaacatgaagactttgtgtggctacatgacact
cttattgaaacaacagactatgctgggcttattattccacctgctcctacgaagcccgac
tttgatggtcctcgagagaagatgcagaaactgggagaaggtgaagggtctatgaccaaa
gaagaatttgccaagatgaaacaagaactggaagctgagtatctcgctgtgtttaagaag
actgtgtcctcccatgaagtctttcttcagcggctttcttctcaccctgttctcagtaaa
gatcgcaactttcatgttttcctggaatatgatcaggatctaagtgttaggcggaaaaat
actaaagagatgtttggtggcttcttcaaaagtgtggtgaaaagtgctgatgaagtcctt
tttactggagttaaggaggtagatgacttctttgagcaagagaagaacttccttattaac
tattacaataggatcaaagattcttgtgtgaaagctgacaaaatgaccagatctcataaa
aatgttgccgatgactatatccacaccgcagcctgcttacatagcctggctttagaagag
cccacagtcatcaaaaagtacctattgaaggttgctgagctatttgaaaaactaaggaaa
gtagagggtcgagtttcatcagatgaagatttgaagctaacagagctcctccgatactac
atgctcaacattgaagctgctaaggatctcttatacagacgcaccaaagccctcattgac
tatgagaactcaaacaaagctctggataaggcccggttaaagagcaaagacgtcaagttg
gctgaggcacaccagcaggagtgctgccagaaatttgaacaactttccgaatctgcaaaa
gaaggttga

>gi568815578r:17924639_18157634|GENSCAN_predicted_peptide_3|450_aa
MAASSHGLWTRKGKNAATPELAGPPAQESEAGRTSPCCGPPPAAAATREPRPWRRGTRAG
AAWLCEERRSWAAAAAAWAPLGGGHGPASAGLPARRRQEASGLRHHPSCPGSRRAGRHVL
PQSSLPVPAAVHLGAGQRRHVGPTLAPLHEEAANRRAATRTGSNGHSPSKTRLEKDRVSV
RGEFITQPESKMAASADVTRSRESRRARFGGSRASETPALPLGEKKVNPYEEVDQEKYSN
LVQSVLSSRGVAQTPGSVEEDALLCGPVSKHKLPNQDVFLQGKRFHEALESILSPQETLK
ERDENLLKSGYIESVQHILKDVSGVRALESAVQHETLNYIGLLDCVAEYQGKLCVIDWKT
SEKPKPFIQSTFDNPLQVVAYMGAMNHDTNYSFQVQCGLIVVAYKDGSPAHPHFMDAELC
SQYWTKWLLRLEEYTEKKKNQNIQKPEYSE

>gi568815578r:17924639_18157634|GENSCAN_predicted_CDS_3|1353_bp
atggcggcgagcagccacggcctatggacgcgcaagggaaagaatgcagcgaccccggag
ctcgcagggccgcccgcccaggagtctgaggctgggaggacctcaccttgctgcggtcct
cctcctgctgctgcagcaactcgggaaccgcggccatggcgacgcgggactcgagcaggg
gccgcctggctgtgcgaggaaagaagaagctgggccgccgccgccgccgcctgggcgcct
ctcgggggcggccacggccccgcctccgccggcctccctgcccgacggcggcaggaggcc
tccggactccgccaccatcccagctgccccgggagcaggcgagcagggcgccacgtgctc
ccccagagcagcctcccagtccccgctgccgtccatcttggagccgggcaaagacgccac
gtggggcctacccttgctccgctccacgaggaggccgccaaccgcagggccgcgacacgg
acgggaagcaacggacactctcccagcaagacgcgtctagagaaagaccgcgtttcggtg
cggggggaatttattactcagcccgagtccaagatggcagcgagcgctgacgtcaccaga
tctcgtgagagcagaagggcgcgatttggaggctcccgcgcttcggagacgccggccctt
ccgctcggagagaaaaaagtgaacccatatgaagaagtggaccaagaaaaatactctaat
ttagttcagtctgtcttgtcatccagaggcgtcgcccagaccccgggatcggtggaggaa
gatgctttgctctgtggacccgtgagcaagcataagctgccaaaccaagacgtcttttta
caagggaaacggttccacgaagccttggaaagcatactttcaccccaggaaaccttaaaa
gagagagatgaaaatctcctcaagtctggttacattgaaagtgtccagcatattctgaaa
gatgtcagtggagtgcgagctcttgaaagtgctgttcaacatgaaaccttaaactatata
ggtctgctggactgtgtggctgagtatcagggcaagctctgtgtgattgattggaagaca
tcagagaaaccaaagccttttattcaaagtacatttgacaacccactgcaagttgtggca
tacatgggtgccatgaaccatgataccaactacagctttcaggttcaatgtggcttaatt
gtggtggcctacaaagatggatcacctgcccacccacatttcatggatgcagagctctgt
tcccagtactggaccaagtggcttcttcgactagaagaatatacggaaaagaaaaagaac
cagaatattcagaaaccagaatattcagaatag

>gi568815578r:17924639_18157634|GENSCAN_predicted_peptide_4|147_aa
MSDAAVDTSSEITTKDLKKKEAVEEAENGRDTPANGKANEENGEQEADNEVDEEEEEGGE
EDEEEEEGDGEEEDGDEDEEAESARTFSFGTYHVLGAQTSPHREETIRRGPCGEELRPLA
NHQHELPGSRENGPSDEAQAPAFESFS

>gi568815578r:17924639_18157634|GENSCAN_predicted_CDS_4|444_bp
atgtcagacgcagccgtagacaccagctccgaaatcaccaccaaggacttaaagaagaag
gaagctgtggaggaagcggaaaatggaagagacacccctgctaatgggaaggctaatgag
gaaaatggggagcaggaagctgacaatgaagtagatgaagaagaggaagaaggtggggag
gaagacgaggaggaagaagaaggcgatggtgaggaagaggatggtgatgaagacgaggaa
gctgagtccgctaggaccttctcctttggaacctaccacgtccttggagcccaaaccagc
ccacacagagaggagaccataaggagaggtccatgtggagaggaattgaggcccctagcc
aaccaccagcatgaactaccaggttcacgagagaatgggccttcagatgaagcccaggcc
ccagcctttgagtctttcagctga

>gi568815578r:17924639_18157634|GENSCAN_predicted_peptide_5|306_aa
MPKVFLVKRRSLGVSVRSWDELPDEKRADTYIPVGLGRLLHDPPEDCRSDGGSSSGSGSS
SAGEPGGAESSSSPHAPESETPEPGDAEGPDGHLATKQRPVARSKIKVTVGALVSRKEWR
RKKAPFAPLQGDFYFIGQFTTGTCSDSVVHSCDLCGKGFRLQRMLNRHLKCHNQVKRHLC
TFCGKGFNDTFDLKRHVRTHTGIRPYKCNVCNKAFTQRCSLESHLKKIHGVQQQYAYKQR
RDKLYVCEDCGYTGPTQEDLYLHVNSAHPGSSFLKKTSKKLAALLQGKLTSAHQENTSLS
EEEERK

>gi568815578r:17924639_18157634|GENSCAN_predicted_CDS_5|921_bp
atgcccaaagtcttcctggtgaagaggaggagcctgggggtctcggtccgcagctgggat
gagctcccggatgagaaaagggcagacacctacatcccagtgggcctaggccgcctgctc
cacgacccccccgaggactgccgcagcgacggcggcagcagcagcggcagcggcagcagc
agcgcgggggagcctggaggagcagagagcagctcgtccccgcacgcccccgagagcgaa
acccccgagcccggcgacgccgagggccccgatggacacctggcgaccaagcagcgcccg
gtcgccagatcgaaaatcaaggtgactgttggtgctctagtcagcaggaaggagtggagg
aggaagaaggcaccgtttgctccccttcaaggagatttctatttcattggccagttcacc
acaggcacgtgcagcgactcggtggttcacagctgtgacctgtgtggcaagggcttccgt
ctgcagcgcatgctgaaccgtcacctcaagtgccacaaccaggtgaaaagacacctgtgc
accttctgcggcaagggcttcaacgacaccttcgacctgaagaggcacgtccgcacacac
acaggcattcgtccctacaaatgcaacgtctgcaataaagccttcacccagcgctgctct
ctggagtcccacctgaagaaaatccatggggtgcagcagcagtatgcctataagcagcgg
cgggacaagctctacgtctgcgaggattgcggctacacgggccccacccaggaggacctg
tacctgcacgtgaacagtgcccatccgggcagctcgtttctcaaaaagacatctaaaaaa
ctggcagcccttctgcagggcaagctgacatccgcacaccaggagaataccagcctgagt
gaggaggaggagaggaagtga

>gi568815578r:17924639_18157634|GENSCAN_predicted_peptide_6|503_aa
MSELPFTTASKRIKYLGIQLTMDVKDLFKENYKLLLSEIKEFTNKWNNIPCSWIGRLNIV
RMAILPQVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRTHIATSILSQKSKAGSITLP
DFKLYYKAAVTKTAWYWYQNRDIDQWNRIEPSEIIPHIYNHLIFDKPDKNKKWGKDFVFN
KWCWENWLAVCRKLKLDPFLTPYAKINSRWFKDLNVRLKTIKTLEENLGNTIQAIGMGKD
FMTKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTEWEKIFTIYPSDKGLISRI
YKELKQIYKKKSNNPIKKWAKDMNRHFSKEDIYAANRHMKKCSSSLAIREMQIKTTMRYH
LTPVRMAIIKKSGNNSGERRTRRLGLCARGVEPGQYRRRCALCGGLCASGGREREAAAAS
VGMSRSSKVVLGLSVLLTAATVAGVHVKQQWDQQRLRDGVIRDIERQIRKKENIRLLGEQ
IILTEQLEAEREKMLLAKGSQKS

>gi568815578r:17924639_18157634|GENSCAN_predicted_CDS_6|1512_bp
atgagtgaactcccatttacaactgcttcaaagagaataaaatacctaggaatccagctt
acaatggatgtgaaggacctcttcaaggagaactacaaattactgctcagtgaaataaaa
gagttcacaaacaaatggaataacattccatgctcatggataggaagactcaatattgtg
agaatggccatactgccccaggtaatttataggttcaatgccatccccatcaagctacca
atgactttcttcacagaattggaaaaaactactttaaagttcatatggaaccaaaaaaga
acccacattgccacatcaatcctaagccaaaagagcaaagctggaagcatcacactacct
gacttcaaactatactacaaggctgcagtaaccaaaacagcatggtactggtaccaaaac
agagatatagaccaatggaacagaatagagccctcggaaataataccacacatctacaac
catctgatctttgacaaacctgacaaaaacaagaaatggggaaaggatttcgtatttaat
aaatggtgctgggaaaactggctagccgtatgtagaaagctgaaactggatcccttcctt
acaccttatgcaaaaattaattcaagatggtttaaagacttaaatgttagacttaaaacc
ataaaaactctagaagaaaacctaggcaataccattcaggccataggcatgggcaaggac
ttcatgactaaaacaccaaaagcaatggcaacaaaagccaaaattgacaaatgggatcta
attaaactaaagagcttctgcacagcaaaagaaactaccatcagagtgaacaggcaacct
acagaatgggagaaaatttttacaatctacccatctgacaaagggttaatatccagaatc
tacaaagaacttaaacaaatttacaagaaaaaatcaaacaaccccatcaaaaagtgggca
aaggatatgaacagacacttctcaaaagaagacatttatgcagccaacagacacatgaaa
aaatgctcatcatcactggccatcagagaaatgcaaatcaaaaccacaatgagatatcat
ctcacaccagttagaatggcaatcattaaaaagtcaggaaataacagcggcgagcggcgc
acgcgacggctggggctctgcgctcgaggggtcgagcctgggcagtacaggcggcggtgc
gcactctgcggcggcctctgcgcctcgggcgggcgggagagagaggccgcggccgccagc
gtggggatgtctaggagctcgaaggtggtgctgggcctctcggtgctgctgacggcggcc
acagtggccggcgtacatgtgaagcagcagtgggaccagcagaggcttcgtgacggagtt
atcagagacattgagaggcaaattcggaaaaaagaaaacattcgtcttttgggagaacag
attattttgactgagcaacttgaagcagaaagagagaagatgttattggcaaaaggatct
caaaaatcatga

>gi568815578r:17924639_18157634|GENSCAN_predicted_peptide_7|167_aa
MDSSIHLSSLISRHDDEATRTSTSEGLEEGEVEGETLLIVESEDQASVDLSHDQSGDSLN
SDEGDVSWMEEQLSYFCDKCQKWIPASQLREQLSYLKGDNFFRFTCSDCSADGKEQYERL
KLTWQQVVMLAMYNLSLEGSGRQGYFRWKEDICAFIEKHWTFLLGNS

>gi568815578r:17924639_18157634|GENSCAN_predicted_CDS_7|501_bp
atggatagtagcatccacctgagtagtctgatcagtcggcatgatgacgaagccacgaga
acatcgacctcagaaggactggaggaaggtgaagtggagggagagacgctcctgatcgtc
gaatccgaggatcaggcatcagtggacttatcgcacgaccagagtggggattccctcaac
agtgatgaaggagacgtgtcttggatggaggagcagctgtcctacttctgtgacaagtgc
caaaaatggataccagccagtcagctgagggaacagctcagttaccttaagggtgataat
ttttttaggtttacttgttcggattgctcagcagatggcaaggagcagtatgaaaggctg
aagctgacatggcagcaagtcgtcatgttggcaatgtacaacttgtctctggaaggaagt
ggacgtcaaggttatttcaggtggaaagaagatatctgtgcttttattgagaaacattgg
acttttttactagggaatagn