GENSCAN 1.0	Date run:  4-Nov-116	Time: 08:35:23

Sequence gi568815581r:48830478_49044734 : 214257 bp : 46.92% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   2041   2125   85  1  1  111   46    71 0.752   5.02
 1.02 Intr +  11297  11410  114  1  0   87   89   112 0.071  11.84
 1.03 Intr +  12925  13083  159  0  0   40   77    59 0.527   0.18
 1.04 Intr +  17587  17689  103  0  1  118  100    45 0.994   8.45
 1.05 Intr +  17845  17978  134  2  2   52   72   216 0.983  16.76
 1.06 Intr +  18775  18900  126  0  0   46   80   171 0.997  12.98
 1.07 Intr +  20612  20700   89  1  2   59   70    86 0.997   2.67
 1.08 Intr +  21082  21151   70  1  1   75   96    69 0.926   5.58
 1.09 Intr +  22029  22151  123  2  0   80   80   134 0.990  12.58
 1.10 Intr +  24356  24430   75  1  0   65   75    85 0.836   4.61
 1.11 Intr +  25615  25710   96  0  0   80   95     9 0.586   1.01
 1.12 Intr +  29837  29972  136  1  1   49   99    65 0.883   3.84
 1.13 Intr +  31799  31827   29  0  2  121  131    -8 0.994   4.63
 1.14 Term +  32361  32528  168  2  0  114   48   115 0.982   7.98
 1.15 PlyA +  33340  33345    6                               1.05

 2.00 Prom +  35061  35100   40                              -5.16
 2.01 Init +  41074  41086   13  0  1  110   95     8 0.824   3.40
 2.02 Intr +  50643  50843  201  1  0  114   72   167 0.981  16.96
 2.03 Intr +  51222  51288   67  1  1   92   68    44 0.393   0.76
 2.04 Intr +  52869  53022  154  0  1   43  117    41 0.303   2.57
 2.05 Intr +  62153  62320  168  1  0  -13   31   187 0.116   3.04
 2.06 Intr +  62932  62979   48  0  0  103   95    -8 0.417   0.28
 2.07 Intr +  64679  64857  179  1  2  100  111   230 0.983  25.22
 2.08 Term +  65178  65292  115  0  1  116   54   138 0.812  11.24
 2.09 PlyA +  69610  69615    6                               1.05

 3.00 Prom +  71334  71373   40                              -5.46
 3.01 Init +  78027  78343  317  2  2  108   89   288 0.999  25.71
 3.02 Intr +  80331  80403   73  0  1   90   95    69 0.998   7.21
 3.03 Intr +  82357  82544  188  0  2   71   90   180 0.999  14.99
 3.04 Intr +  85599  85710  112  0  1   89  110    89 0.999  11.58
 3.05 Intr +  90683  90795  113  1  2   38   92    53 0.969  -0.12
 3.06 Intr +  92370  92460   91  0  1   97   90   138 0.952  14.90
 3.07 Term +  96487  96657  171  0  0  116   41   119 0.958   7.83
 3.08 PlyA +  98558  98563    6                               1.05

 4.15 PlyA -  99641  99636    6                               1.05
 4.14 Term - 100135  99998  138  1  0  152   42    69 0.999   6.66
 4.13 Intr - 101240 101166   75  2  0  106   72   110 0.983  10.91
 4.12 Intr - 102869 102728  142  1  1   47   69   222 0.692  16.56
 4.11 Intr - 105765 105693   73  1  1  114   39    19 0.853  -1.94
 4.10 Intr - 106647 106543  105  1  0   87   78   104 0.974   9.49
 4.09 Intr - 110585 110447  139  2  1  105   58   239 0.892  22.64
 4.08 Intr - 112080 111991   90  0  0   72   42   119 0.976   5.89
 4.07 Intr - 113498 113448   51  2  0  123  111    33 0.996   8.20
 4.06 Intr - 114361 114204  158  2  2   46   83    82 0.056   3.23
 4.05 Intr - 123934 123912   23  0  2   94   90    27 0.074   0.69
 4.04 Intr - 130510 130409  102  0  0   51   91   115 0.864   7.39
 4.03 Intr - 131342 131250   93  1  0   92  105    79 0.998   9.08
 4.02 Intr - 134003 133833  171  1  0  102   61   167 0.998  14.46
 4.01 Init - 136755 136670   86  0  2   73   91   196 0.999  16.69
 4.00 Prom - 139745 139706   40                              -5.46

 5.00 Prom + 149743 149782   40                              -3.46
 5.01 Init + 167269 167443  175  0  1  110  111   465 0.970  50.51
 5.02 Intr + 168632 168692   61  0  1   94   97    65 0.789   5.79
 5.03 Intr + 195141 195189   49  0  1  109  100    44 0.967   6.38
 5.04 Intr + 195989 196040   52  1  1   94  116    54 0.992   7.28
 5.05 Intr + 201433 201496   64  2  1  116   73    96 0.896   8.68
 5.06 Intr + 207691 207972  282  1  0   83   89   388 0.896  34.93
 5.07 Intr + 209480 209614  135  2  0   97  111   112 0.999  14.08
 5.08 Intr + 210901 211023  123  1  0   81   71   102 0.994   7.50
 5.09 Intr + 211765 211900  136  1  1   64   75   171 0.999  13.97
 5.10 Intr + 212951 213073  123  1  0  134   78    16 0.954   5.98
 5.11 Intr + 213490 213609  120  0  0   74   53   200 0.636  15.79

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  11231  11410  180  1  0   92   89   151 0.879  14.79
S.002 Init - 114257 114204   54  2  0   62   83    79 0.929   6.12


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815581r:48830478_49044734|GENSCAN_predicted_peptide_1|502_aa
XIIIISGKVLEDFLALAMHFADEETGQKRVIFNSVEKFYIPGGDVTCHYTFTQHFIPRRK
DWIGIFRYVMCLFASAIHPEIRHHSQLHCEGAVAYLYPSLNSFSIIVWNIKLIDEQRKLE
VGWKTTREYYTFMWVTLPIDLNNKSAKQQEVQFKAYYLPKDDEYYQFCYVDEDGVVRGAS
IPFQFRPENEEDILVVTTQGEVEEIEQHNKELCKENQELKDSCISLQKQNSDMQAELQKK
QEELETLQSINKKLELKVKEQKDYWETELLQLKEQNQKMSSENEKMGIRVDQLQAQLSTQ
EKEMEKLVQGDQDKTEQLEQLKKENDHLFLSLTEQEPRNKKAALTVEEQLAQEVERLKAK
DENFDLSKRLSENEIICNALQRQKERLEGENDLLKRENSRLLSYMGLDFNSLPYQVPTSD
EGGARQNPGLAYGNPYSGIQESSSPSPLSIKKCPICKADDICDHTLEQQQMQPLCFNCPI
CDKIFPATEKQIFEDHVFCHSL

>gi568815581r:48830478_49044734|GENSCAN_predicted_CDS_1|1509_bp
nngatcatcattatatcaggcaaggtccttgaagattttctagccttagccatgcatttt
gctgatgaggaaacaggccagaaaagggtcatctttaacagtgtggagaagttctacatc
cctggaggggacgtcacatgtcattataccttcacccagcatttcatccctcgtcgaaag
gattggattggcatctttagatatgtcatgtgcctatttgccagtgctattcatcctgaa
atcagacaccattctcaactgcactgtgaaggagctgttgcttatttatatccttcattg
aattccttttccataattgtttggaacatcaagcttattgatgagcaacggaagctggag
gtggggtggaagacaacccgtgagtattacaccttcatgtgggttactttgcccattgac
ctaaacaacaaatcagctaaacagcaggaagtccaattcaaagcttactacctgcccaag
gatgatgagtattaccagttctgctatgtggatgaggatggtgtggtccggggagcaagt
attcctttccaattccgtccagaaaatgaggaagacatcctggttgttaccactcaggga
gaggtggaagagattgagcagcacaacaaggagctttgcaaagaaaaccaggagctgaag
gacagctgtatcagcctccagaagcagaactcagacatgcaggctgagctccaaaagaag
caggaggagctagaaaccctacagagcatcaataagaagttggaactgaaagtgaaagaa
cagaaggactattgggagacagagctgcttcaactgaaagaacaaaaccagaagatgtcc
tcagaaaatgagaagatgggaatcagagtggatcagcttcaggcccagctgtcaactcaa
gagaaagaaatggagaagcttgttcagggagatcaagataagacagagcagttagagcag
ctgaaaaaggaaaatgaccacctctttctcagtttaactgaacaggagcctaggaacaag
aaagcggcactaactgtggaggagcagttagcacaagaggtggaacgccttaaggcaaag
gatgaaaactttgacctgtcaaaaagactgagtgagaacgaaattatatgtaatgctctg
cagagacagaaagagagattggaaggagaaaatgatcttttgaagagggagaacagcaga
ttgctcagttacatgggtctggattttaattctttgccgtatcaagtacctacttcagat
gaaggaggcgcaagacaaaatccaggacttgcctatggaaacccatattctggtatccaa
gaaagttcttcccccagcccgctctccatcaagaaatgccctatctgcaaagcagatgat
atttgtgatcacaccttggagcaacagcagatgcagcccctttgtttcaattgtccaatt
tgtgacaagatcttcccagctacagagaagcagatctttgaagaccacgtgttctgccac
tctctctga

>gi568815581r:48830478_49044734|GENSCAN_predicted_peptide_2|314_aa
MPGLDRDAGTQHRTWAHFIQIMKVEETAASKCNWPAVTQLHDSKVEFLLPHWVLCGQQQA
TCHHQEARHLTGILSSPSTGCETLRKSLNDALAGLCSSEPSLRYMTLTNQSVARKRNGQH
SLQALPLCELLTHRTSQRRNTGPKPESPASIRMEAGIATKLLWRERKQLRKANKSGESMT
STNGDAGILRPMRMEKVQDTWTEKMQTAGALFISPALPSYSNFPLQVARREFQTSVVSRD
IDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMG
LFCLMVAFLILFAM

>gi568815581r:48830478_49044734|GENSCAN_predicted_CDS_2|945_bp
atgcctggcctagaccgagacgcgggcacccagcaccgcacctgggcccacttcatccag
atcatgaaggtggaggagactgcagccagcaagtgcaactggccagcagtcacacagctc
catgactccaaggttgagttcctgctgcctcactgggtcctctgtggccagcaacaagcc
acgtgtcaccaccaagaggcccgacatcttacaggaatcctgtcttcaccatcaactggc
tgcgagaccttgagaaagtcacttaatgatgcactggctgggctatgctctagtgaaccc
agcctaagatacatgacgcttactaaccagtcagtagcaaggaaacggaatggccagcac
tcgcttcaggctctgcctctgtgtgagttgctgacacacagaacatcgcagaggaggaac
accgggcccaaaccggaaagccccgcctctatccgcatggaggcgggaattgccacgaag
ctcctgtggagggagaggaagcagctgcggaaagccaataagagtggggaatcgatgacg
tcaaccaatggggacgcggggatattacggccaatgagaatggagaaggtccaggacacg
tggactgaaaaaatgcagaccgccggggcattattcatttctccagctctgccttcctac
agcaacttcccactccaggtggccagacgggagttccagaccagtgttgtctcccgggac
attgacacagcagccaagtttattggtgctggggcagccacagttggtgtggctggttca
ggggctggcattggaaccgtgtttggcagcttgatcattggctatgccaggaacccgtct
ctcaagcagcagctcttctcctatgccattcttggctttgccctgtctgaggccatgggg
cttttctgtttgatggtcgccttcctcatcctcttcgccatgtga

>gi568815581r:48830478_49044734|GENSCAN_predicted_peptide_3|354_aa
MAESPTEEAATAGAGAAGPGASSVAGVVGVSGSGGGFGPPFLPDVWAAAAAAGGAGGPGS
GLAPLPGLPPSAAAHGAALLSHWDPTLSSDWDGERTAPQCLLRIKRDIMSIYKEPPPGMF
VVPDTVDMTKIHALITGPFDTPYEGGFFLFVFRCPPDYPIHPPRVKLMTTGNNTVRFNPN
FYRNGKVCLSILGTWTGPAWSPAQSISSVLISIQSLMTENPYHNEPGFEQERHPGDSKNY
NECIRHETIRVAVCDMMEGKCPCPEPLRGVMEKSFLEYYDFYEVACKDRLHLQGQTMQDP
FGEKRGHFDYQSLLMRLGLIRQKVLERLHNENAEMDSDSSSSGTETDLHGSLRV

>gi568815581r:48830478_49044734|GENSCAN_predicted_CDS_3|1065_bp
atggcggagagtccgactgaggaggcggcaacggcgggcgccggggcggcgggccccggg
gcgagcagcgttgctggtgttgttggcgttagcggcagcggcggcgggttcgggccgcct
ttcctgccggatgtgtgggcggcggcggcggcagcgggcggggccgggggcccggggagc
ggcctggctccgctgcccgggctcccgccctcagccgctgcccacggggccgcgctgctt
agccactgggaccccacgctcagctccgactgggacggcgagcgcaccgcgccgcagtgt
ctactccggatcaagcgggatatcatgtccatttataaggagcctcctccaggaatgttc
gttgtacctgatactgttgacatgactaagattcatgcattgatcacaggcccatttgac
actccttatgaagggggtttcttcctgttcgtgtttcggtgtccgcccgactatcccatc
cacccacctcgggtcaaactgatgacaacgggcaataacacagtgaggtttaaccccaac
ttctaccgcaatgggaaagtctgcttgagtattctaggtacatggactggacctgcctgg
agcccagcccagagcatctcctcagtgctcatctctatccagtccctgatgactgagaac
ccctatcacaatgagcccggctttgaacaggagagacatccaggagacagcaaaaactat
aatgaatgtatccggcacgagaccatcagagttgcagtctgtgacatgatggaaggaaag
tgtccctgtcctgaacccctacgaggggtgatggagaagtcctttctggagtattacgac
ttctacgaggtggcctgcaaagatcgcctgcaccttcaaggccaaactatgcaggaccct
tttggagagaagcggggccactttgactaccagtccctcttgatgcgcctgggactgata
cgtcagaaagtgctggagaggctccataatgagaatgcagaaatggactctgatagcagt
tcatctgggacagagacagaccttcatgggagcctgagggtttag

>gi568815581r:48830478_49044734|GENSCAN_predicted_peptide_4|481_aa
MVATKTFALLLLSLFLAVGLGEKKEGHFSALPSLPVGSHAKVSSPQPRGPRYAEGTFISD
YSIAMDKIHQQDFVNWLLAQKGKKNDWKHNITQREARALELASQANRKEEEAVEPQSSPA
KNPSDEDLLRDLLIQELLACLLDQTNLCRLRLRNRRERDDARLGLPPWGAGGGVRDVETR
GPGSRAARGPRVGMHRRGVGAGAIAKKKLAEAKYKERGTVLAEDQLAQPFPSLYVLRVYP
VIVIGEEVEEAVKQENGAMSKQLDMFKTNLEEFASKHKQEIRKNPEFRVQFQDMCATIGV
DPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLITLEELHQQVLKGRGKFAQ
DVSQDDLIRAIKKLKALGTGFGIIPVGGTYLIQSVPAELNMDHTVVLQLAEKNGYVTVSE
IKASLKWETERARQVLEHLLKEGLAWLDLQAPGEAHYWLPALFTDLYSQEITAEEAREAL
P

>gi568815581r:48830478_49044734|GENSCAN_predicted_CDS_4|1446_bp
atggtggccacgaagacctttgctctgctgctgctgtccctgttcctggcagtgggacta
ggagagaagaaagagggtcacttcagcgctctcccctccctgcctgttggatctcatgct
aaggtgagcagccctcaacctcgaggccccaggtacgcggaagggactttcatcagtgac
tacagtattgccatggacaagattcaccaacaagactttgtgaactggctgctggcccaa
aaggggaagaagaatgactggaaacacaacatcacccagagggaggctcgggcgctggag
ctggccagtcaagctaataggaaggaggaggaggcagtggagccacagagctccccagcc
aagaaccccagcgatgaagatttgctgcgggacttgctgattcaagagctgttggcctgc
ttgctggatcagacaaacctctgcaggctcaggctgaggaaccgtcgtgaaagagatgac
gcgcggctcgggcttccgccttggggagccggcggcggagtccgggacgtggagacccgg
ggtcccggcagccgggcggcccgcgggcccagggtggggatgcaccgccgcggggtggga
gctggcgccatcgccaagaagaaacttgcagaggccaagtataaggagcgagggacggtc
ttggctgaggaccagctagcccagcccttcccttctctgtacgtgctccgagtttaccca
gtgattgtgattggggaagaagtggaggaagccgttaagcaggaaaatggggctatgtca
aagcagttggacatgttcaagaccaacctggaggaatttgccagcaaacacaagcaggag
atccggaagaatcctgagttccgtgtgcagttccaggacatgtgtgcaaccattggcgtg
gatccgctggcctctggaaaaggattttggtctgagatgctgggcgtgggggacttctat
tacgaactaggtgtccaaattatcgaagtgtgcctggcgctgaagcatcggaatggaggt
ctgataactttggaggaactacatcaacaggtgttgaagggaaggggcaagttcgcccag
gatgtcagtcaagatgacctgatcagagccatcaagaaactaaaggcacttggcactggc
ttcggcatcatccctgtgggcggcacttacctcattcagtctgttccagctgagctcaat
atggatcacaccgtggtgctgcagctggcagagaagaatggctacgtgactgtcagtgag
atcaaagccagtcttaaatgggagaccgagcgagcgcggcaagtgctggaacacctgctg
aaggaagggttggcgtggctggacttacaggccccaggggaggcccactactggctgcca
gctctcttcactgacctctactcccaggagattacagctgaggaggccagagaagccctc
ccctga

>gi568815581r:48830478_49044734|GENSCAN_predicted_peptide_5|440_aa
MNKLYIGNLNESVTPADLEKVFAEHKISYSGQFLVKSGYAFVDCPDEHWAMKAIETFSGK
VELQGKRLEIEHSVPKKQRSRKIQIRNIPPQLRWEVLDSLLAQYGTVENCEQVNTESETA
VVNVTYSNREQTRQAIMKLNGHQLENHALKVSYIPDEQIAQGPENGRRGGFGSRGQPRQG
SPVAAGAPAKQQQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAA
EKAISVHSTPEGCSSACKMILEIMHKEAKDTKTADEVPLKILAHNNFVGRLIGKEGRNLK
KVEQDTETKITISSLQDLTLYNPERTITVKGAIENCCRAEQEIMKKVREAYENDVAAMSL
QSHLIPGLNLAAVGLFPASSSAVPPPPSSVTGAAPYSSFMQAPEQEMVQVFIPAQAVGAI
IGKKGQHIKQLSRFASASIK

>gi568815581r:48830478_49044734|GENSCAN_predicted_CDS_5|1320_bp
atgaacaagctttacatcggcaacctcaacgagagcgtgacccccgcggacttggagaaa
gtgtttgcggagcacaagatctcctacagcggccagttcttggtcaaatccggctacgcc
ttcgtggactgcccggacgagcactgggcgatgaaggccatcgaaactttctccgggaaa
gtagaattacaaggaaaacgcttagagattgaacattcggtgcccaaaaaacaaaggagc
cggaaaattcaaatccgaaatattccaccccagctccgatgggaagtactggacagcctg
ctggctcagtatggtacagtagagaactgtgagcaagtgaacaccgagagtgagacggca
gtggtgaatgtcacctattccaaccgggagcagaccaggcaagccatcatgaagctgaat
ggccaccagttggagaaccatgccctgaaggtctcctacatccccgatgagcagatagca
cagggacctgagaatgggcgccgagggggctttggctctcggggtcagccccgccagggc
tcacctgtggcagcgggggccccagccaagcagcagcaagtggacatcccccttcggctc
ctggtgcccacccagtatgtgggtgccattattggcaaggagggggccaccatccgcaac
atcacaaaacagacccagtccaagatagacgtgcataggaaggagaacgcaggtgcagct
gaaaaagccatcagtgtgcactccacccctgagggctgctcctccgcttgtaagatgatc
ttggagattatgcataaagaggctaaggacaccaaaacggctgacgaggttcccctgaag
atcctggcccataataactttgtagggcgtctcattggcaaggaaggacggaacctgaag
aaggtagagcaagataccgagacaaaaatcaccatctcctcgttgcaagaccttaccctt
tacaaccctgagaggaccatcactgtgaagggggccatcgagaattgttgcagggccgag
caggaaataatgaagaaagttcgggaggcctatgagaatgatgtggctgccatgagcctg
cagtctcacctgatccctggcctgaacctggctgctgtaggtcttttcccagcttcatcc
agcgcagtcccgccgcctcccagcagcgttactggggctgctccctatagctcctttatg
caggctcccgagcaggagatggtgcaggtgtttatccccgcccaggcagtgggcgccatc
atcggcaagaaggggcagcacatcaaacagctctcccggtttgccagcgcctccatcaag