GENSCAN 1.0	Date run:  4-Nov-116	Time: 08:34:12

Sequence gi568815590f:117420877_117639975 : 219099 bp : 38.55% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   1105   1336  232  2  1   61   83   103 0.186   3.01
 1.02 Intr +   2958   3114  157  0  1   77   63    68 0.530   2.29
 1.03 Intr +   3194   3328  135  1  0   37   49    94 0.227   0.24
 1.04 Intr +  14535  14865  331  2  1   89   41   364 0.399  26.08
 1.05 Intr +  17609  17716  108  0  0   67   87    29 0.139   0.04
 1.06 Term +  18351  18499  149  1  2   58   54   149 0.531   5.58
 1.07 PlyA +  21393  21398    6                               1.05

 2.00 Prom +  24498  24537   40                              -3.25
 2.01 Sngl +  34960  35562  603  0  0   86   43   136 0.748   4.85
 2.02 PlyA +  36316  36321    6                               1.05

 3.03 PlyA -  36542  36537    6                               1.05
 3.02 Term -  43783  43669  115  0  1   92   41   113 0.925   4.06
 3.01 Init -  47762  47731   32  2  2  113   72    17 0.381   1.86
 3.00 Prom -  51404  51365   40                              -5.65

 4.00 Prom +  53979  54018   40                              -5.25
 4.01 Sngl +  57819  58748  930  2  0   77   49   184 0.738   9.83
 4.02 PlyA +  59410  59415    6                               1.05

 5.00 Prom +  63845  63884   40                              -3.75
 5.01 Init +  66827  66971  145  1  1   50   80   110 0.439   6.73
 5.02 Term +  68366  69024  659  0  2   25   37   377 0.824  19.42
 5.03 PlyA +  69044  69049    6                               1.05

 6.02 PlyA -  71454  71449    6                               1.05
 6.01 Sngl -  75246  75055  192  0  0   94   49   113 0.650   2.89
 6.00 Prom -  79356  79317   40                              -3.45

 7.00 Prom +  93172  93211   40                              -5.65
 7.01 Init + 100001 100177  177  1  0   84   91   233 0.922  20.51
 7.02 Intr + 107775 107933  159  2  0   41   76   114 0.938   4.76
 7.03 Intr + 109847 109951  105  1  0   61   87   205 0.970  17.19
 7.04 Term + 127204 127299   96  0  0  107   37    72 0.174   0.99
 7.05 PlyA + 127776 127781    6                               1.05

 8.06 PlyA - 128026 128021    6                               1.05
 8.05 Term - 128457 128377   81  0  0   89   38    91 0.037   0.91
 8.04 Intr - 132634 132512  123  1  0   47   59    77 0.013   0.56
 8.03 Intr - 141176 141129   48  2  0   88   85    51 0.041   2.76
 8.02 Intr - 146153 146092   62  0  2   48   78    65 0.040  -0.97
 8.01 Init - 151064 150926  139  2  1   71   64   107 0.472   6.95
 8.00 Prom - 154642 154603   40                              -1.85

 9.00 Prom + 156726 156765   40                              -6.85
 9.01 Init + 163370 163489  120  1  0   73   94    41 0.258   3.45
 9.02 Intr + 168088 168161   74  0  2   56   79    98 0.789   2.99
 9.03 Intr + 174688 174842  155  1  2   45   74    98 0.578   2.89
 9.04 Term + 174902 175140  239  0  2   74   44   168 0.471   6.35
 9.05 PlyA + 178710 178715    6                               1.05

10.00 Prom + 178877 178916   40                              -6.55
10.01 Init + 183463 183504   42  0  0   76   97    39 0.808   4.07
10.02 Intr + 192122 192427  306  1  0   93   17   130 0.022   2.12
10.03 Intr + 196260 196392  133  2  1   71   57    65 0.557   1.00
10.04 Term + 203409 203674  266  1  2   76   33   160 0.465   3.99
10.05 PlyA + 203768 203773    6                               1.05

11.00 Prom + 210426 210465   40                              -7.05
11.01 Sngl + 216066 216788  723  2  0   66   43   256 0.911  14.87
11.02 PlyA + 217145 217150    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815590f:117420877_117639975|GENSCAN_predicted_peptide_1|370_aa
XIQTTIREYYKHLCANKLENLEEMDKFLDTYTLPRLNQEEIESLNRPITSSEIEALINTL
PTKKSPGPDGFTAKFCQSFSRCTVQAVSRSTILGSGGQWPSSHSSTRWCSSRDWCGGSNS
TFPFHTALAEAEVPKPQFLTSVYLQAQLYVETAKAWGLHPLKPWAELYVGLFQSQECSSS
PAMEQSWTENDFDELREEGFRRSIYSELKEEVQTNGKEVKNLEKRLDEWLTRITNAEKSL
KDMMELKTTAQELRDECTSLSSRLDQLEEWNQVHSQILPEVQGGADVVKGGWTRKNFQRK
KRRVGGGGSKMKVMQVESLASEEGETLGLCAEEKPHEDTASRWPSASQGEASEETTTADT
GIVDFQLPEL

>gi568815590f:117420877_117639975|GENSCAN_predicted_CDS_1|1113_bp
naaatacaaacaaccatcagagaatactataaacacctctgtgcaaacaaactagaaaat
ctagaagaaatggataaattcctggacacatacaccctcccaagactaaatcaggaagaa
attgaatccctgaatagaccaataacaagttctgaaattgaagcactaattaatacccta
ccaaccaaaaaaagcccaggaccagatggattcacagccaaattctgccagagcttttcc
aggtgcacagtgcaagctgtcagtagatctaccattctgggatctggaggacagtggcct
tcttctcacagctccactaggtggtgttccagtagggactggtgtgggggctccaactcc
acatttcccttccacactgccctagcagaggcagaggttcctaaaccccagttcttgact
tcagtgtacttgcaggctcaactctatgtggaaactgccaaggcttggggcttgcaccct
ctgaagccatgggctgagctctatgttggtctctttcagtcacaggaatgcagctcctca
ccagcaatggaacaaagctggacggagaatgactttgacgagttgagagaagaaggcttc
agacgatcaatctactcggagctaaaggaggaagttcaaaccaatggcaaagaagttaaa
aaccttgaaaaaagattagatgaatggctaactagaataaccaatgcagagaagtcctta
aaggacatgatggagctgaaaaccacagcacaagaactacgtgacgaatgcacaagcctc
agtagccgactcgatcaactggaagaatggaaccaagttcacagccaaattctaccagag
gtacaaggaggagctgatgtagtgaaggggggatggacaagaaaaaatttccagaggaaa
aagcgaagggttggaggaggagggagcaagatgaaagtaatgcaagttgagtccctggcc
tcagaagagggagagacattagggctgtgcgcagaggaaaaaccacatgaggacacagcg
agcaggtggccatctgcaagccaaggagaggcctcagaggaaaccacaactgctgacacc
gggattgtagacttccagcttccagaactgtga

>gi568815590f:117420877_117639975|GENSCAN_predicted_peptide_2|200_aa
MAILPKVIYRFNAIPIKLPMTFFTELEKTTLNFIWNQKRACIAKTILSQKNKAGGITLPD
FKLYYKAIVTKTAWYWYQNRDTDQWNRTEPSEIIPHIYNYLIFDKPEKNKKWGKDSLFNK
WCWENWLAICRKLKLDPFLTPYTKINSRWNKDLNVRPKTIKTLEENLGNTIQDIGMGKDF
MSKTPKAMATKAKTDKWDLN

>gi568815590f:117420877_117639975|GENSCAN_predicted_CDS_2|603_bp
atggccatactgcccaaggtaatttatagattcaatgccatccccatcaagctaccaatg
actttcttcacagaattggaaaaaactactttaaacttcatatggaaccaaaaaagggcc
tgcattgctaagacaatcctaagccaaaagaacaaagctggaggcatcacactacctgac
ttcaaactatactacaaggctatagtaaccaaaacagcatggtactggtaccaaaacaga
gatacagaccaatggaacagaacagaaccctcagaaataataccacacatctacaactat
ctgatctttgacaaacctgagaaaaacaagaaatggggaaaggattccctatttaataaa
tggtgctgggaaaactggctagccatatgtagaaagctgaaactggatcccttccttaca
ccttatacaaaaattaattcaagatggaataaagacttaaatgttagacctaaaaccata
aaaaccctagaagaaaacctaggcaataccattcaggacataggcatgggcaaggatttc
atgtctaaaacaccaaaagcaatggcaacaaaagccaaaactgacaaatgggatctaaac
taa

>gi568815590f:117420877_117639975|GENSCAN_predicted_peptide_3|48_aa
MAYPGTLDFFGYCSFCLSYNIAQDSVPVFMGHSVDDKDKQPDNYKTVK

>gi568815590f:117420877_117639975|GENSCAN_predicted_CDS_3|147_bp
atggcctatccaggtactttggacttttttggctactgcagtttttgcttgagttacaac
attgcacaagatagtgttcctgtcttcatgggccatagtgtagatgacaaagataaacaa
ccagacaattataaaacagtgaaataa

>gi568815590f:117420877_117639975|GENSCAN_predicted_peptide_4|309_aa
MKQTVEDCCLSAPFVAGQGILLERVSETTLKFIWNQKRAHIAKSILSQKNKAGGITLPDF
KLYYKAIVTKTAWYWYQNRDIDQWNRTEPSEIMPHIYNYLIFDKPEKNKKWGKDSLFNKW
CWENWLAICRKLKLDPFLTPYTKINSRWNKDLNVRPKTIKTLEENLGNTIQDIGMGKDFM
SKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTEWEKISATYSYDKGLISRIYN
ELKQIYRKKTNNPINKWVKDMNRHFSKEDIYAAKRHMKRCSSSLAIREMQIKTTMRYHLT
PVRMTIIKK

>gi568815590f:117420877_117639975|GENSCAN_predicted_CDS_4|930_bp
atgaagcaaacagttgaagactgttgtctaagcgcaccctttgtagctgggcagggaatc
cttcttgaaagggtatctgaaactactttaaagttcatatggaaccaaaaaagagcccac
attgccaagtcaatcctaagccaaaagaacaaagctggaggcatcacactacctgacttc
aaactatactacaaggctatagtaaccaaaacagcatggtactggtaccaaaacagagat
atagaccaatggaacagaacagagccctcagaaataatgccgcatatctacaactatctg
atctttgacaaacctgagaaaaacaagaaatggggaaaggattccctatttaataaatgg
tgctgggaaaactggctagccatatgtagaaagctgaaactggatcccttccttacacct
tatacaaaaattaattcaagatggaataaagacttaaatgttagacctaaaaccataaaa
accctagaagaaaacctaggcaataccattcaggacataggcatgggcaaggacttcatg
tctaaaacaccaaaagcaatggcaacaaaagccaaaattgacaaatgggatctaattaaa
ctaaagagcttctgcacagcaaaagaaactaccatcagagtaaacaggcaacctacagaa
tgggagaaaatttctgcaacctactcatatgacaaagggctaatatccagaatctacaat
gaactcaaacaaatttacaggaaaaaaacaaacaaccccatcaacaagtgggtgaaggat
atgaatagacacttctcaaaagaagacatttatgcagccaaaagacacatgaaaagatgc
tcatcatcactggccatcagagaaatgcaaatcaaaaccacaatgagataccatctcaca
ccagttagaatgacgatcattaaaaagtaa

>gi568815590f:117420877_117639975|GENSCAN_predicted_peptide_5|267_aa
MRKIQQKNTENSKAQSGSSPPNDCKPSPTRVQNWMEDEMDELTDVASVDRSMRQNINRDI
QDLSSPLDQVDLIDIYRTLHPKTAEYTFFSVLHGTYSKINHIIKSKTLLSKLKRTKIITN
SLSDHSAIKLELRIKKLTENHTTTWKVNNLLLKDSWVNNEIKSEIEKFFETNENKETMYQ
NLWDAAKAVLRGKFIALNAHIKKLKRPQIDTLTSQLKELENQGQTNPKASRRQEITNIRV
ECKEINTGKTLQKISESRSWLFEKLIK

>gi568815590f:117420877_117639975|GENSCAN_predicted_CDS_5|804_bp
atgagaaagattcaacaaaaaaatactgaaaactcaaaagcccagagtggctcttctcca
ccaaatgattgcaaaccctctccaacaagagtgcagaactggatggaggatgagatggac
gaattgacagacgtagcttcagtagacagatcaatgagacagaacattaacagggatatt
caggacctgagctcacctctggatcaagtggacctgatagatatctacagaactctccac
ccaaaaacagcagaatatacattcttctcagtgctacatggcacttactctaaaatcaac
cacataattaaaagtaaaacactcctcagcaaattgaaaagaactaaaatcataacaaac
agtctctcagaccacagtgcaatcaaattagaactcaggattaagaaacttactgaaaac
cacactactacatggaaagtgaacaacctgctcctgaaagactcctgggtaaataatgaa
attaagtcagaaatcgagaagttctttgaaaccaatgagaacaaggagacaatgtaccag
aatctttgggatgcagctaaagcagtgttaagagggaaatttatagcactaaatgcccac
atcaaaaagctaaaaagacctcaaattgacaccctaacatcacaactaaaagaactagag
aaccaagggcaaacaaaccccaaagccagcagaagacaagagataaccaacatcagagtg
gaatgcaaggagataaacacaggaaaaacccttcaaaaaatcagtgaatccaggagctgg
ctgtttgaaaaattaataaagtag

>gi568815590f:117420877_117639975|GENSCAN_predicted_peptide_6|63_aa
MKNLNAGTSPPKDCTNSPAMVPNQNRSSEITGKQDKHGLKECSTRSRKMLKIHTKKLLKQ
SRK

>gi568815590f:117420877_117639975|GENSCAN_predicted_CDS_6|192_bp
atgaaaaatctgaatgcagggacatcaccaccaaaggattgcactaactctccagcaatg
gttcctaaccaaaatagaagctcagaaataacaggtaaacaagacaagcatggattgaaa
gaatgctcaacaagatcaaggaaaatgttgaaaatccacacaaagaagcttctaaaacaa
tccaggaaatga

>gi568815590f:117420877_117639975|GENSCAN_predicted_peptide_7|178_aa
MSTPPLAASGMAPGPFAGPQAQQAAREVNTASLCRIGQETVQDIVYRTMEIFQLLRNMQL
PNGVTYHTGTYQDRLTKLQDNLRQLSVLFRKLRLVYDKCNENCGGMDPIPVEQLIPYVEE
DGSKNDDRAGPPRFASEERREIAEVNKGCKGLSEQVVEKKKSISENGANIISLYISHP

>gi568815590f:117420877_117639975|GENSCAN_predicted_CDS_7|537_bp
atgtccacccctccgttggccgcgtcggggatggcgcccgggcccttcgccgggccccag
gctcagcaggccgcccgggaagtcaacacggcgtcgctgtgccgcatcgggcaggagaca
gtgcaggacatcgtgtaccgcaccatggagatcttccagctcctgaggaacatgcagctg
ccaaatggtgtcacttaccacactggaacatatcaagaccggttaacaaagctacaggat
aatcttcgccaactttcagttctcttcaggaagctgagattggtatatgacaaatgcaat
gaaaactgtggtgggatggatcccattccagtcgagcaacttattccatatgtggaagaa
gatggctcaaagaatgatgatcgggctggcccacctcgttttgctagtgaagagaggcga
gaaattgctgaagtaaataaaggttgtaaaggtctttctgaacaggtcgtggaaaagaaa
aagagcatatctgagaatggcgctaacatcatctctctttatatttcccacccctag

>gi568815590f:117420877_117639975|GENSCAN_predicted_peptide_8|150_aa
MGKDFMAKTPKAMATKAKMDKWDLIKLKSFCTAKETSISVNRQPIESALGSRYIRNPGIQ
PEKESEEVQEVLVPPPPEKLKLQMYHFRAPKTFLKSFEELRAKKSKCVTDIINLSSICLN
DTVFYTTLQDAEIHFYGKSGCGSWFGISWC

>gi568815590f:117420877_117639975|GENSCAN_predicted_CDS_8|453_bp
atgggcaaagacttcatggctaaaacaccaaaagcaatggcaacaaaagccaaaatggac
aaatgggatctaattaaactaaagagcttctgcacagcaaaagaaactagcatcagtgtg
aacaggcaacctatagaatctgcccttggctccaggtatatccgtaatcctggaatacag
ccagagaaggaatcagaagaggttcaagaggttcttgtgcctccacctcctgagaagctg
aaattacagatgtaccactttagagctcctaaaacatttctgaagagttttgaagagttg
agagccaagaaatccaaatgtgttactgacataataaatctctcctctatttgtctgaac
gatacagtgttttacactacacttcaagatgcagagatacacttctatggtaaaagtggc
tgtggcagctggtttggcatcagctggtgctga

>gi568815590f:117420877_117639975|GENSCAN_predicted_peptide_9|195_aa
MGPSYMEPERLSPTRGQLDFLCTSGSLEGRRRGWTGTQKQPIFTCTSATEFRGAYRIEKK
TDNKQTLRLGKGPRTVPDTLLGWFSKTGKSNGHVKCSRVSRILGTEYGEKNQKAQRKGRR
NNLFFQGSGVSDSSIVEKFICVYPLQIRTDNGQCCYKTGLSASNVGDDGPEWQKPGGITQ
SPGRRWAQLPYWHPG

>gi568815590f:117420877_117639975|GENSCAN_predicted_CDS_9|588_bp
atgggcccttcctacatggagcctgaaaggctatcgcccacaagaggccaactggacttt
ctctgcacctctggttccctagaaggaagaaggagaggctggacagggactcagaagcag
ccaatattcacttgtactagtgccacggaatttcgtggagcctacagaatagagaagaag
acagacaataaacagactttacgtcttggtaagggcccaagaactgtacctgataccctg
ctggggtggttctcaaagactggaaaaagtaatggtcatgttaaatgcagtagagtttcc
agaattttaggcacagagtatggagagaagaatcaaaaggctcagagaaagggccgaagg
aacaacttgttttttcagggttctggtgttagtgacagcagcattgttgaaaagttcatt
tgtgtctatcctctgcaaatcaggactgacaatgggcaatgctgttataaaactggcctt
tctgccagcaatgtgggtgatgatggtccagagtggcagaagccaggtggcatcactcaa
tcaccaggaagaagatgggcacaactaccttactggcatccaggttga

>gi568815590f:117420877_117639975|GENSCAN_predicted_peptide_10|248_aa
MPKLDGEREERTEKLCLRLETSLIQRDLCHLLWSSISKSFQVLNPFENPMESMDMLQKNK
CTVLAHFHTADKDIPETGQFTKERSSIGLAVPRGWGGLTIMVEGKEEQVTSYMEAAARMQ
WDNHGLLQPRTPQLKQSNNIVMVNTDCQLDWIEGYKVLILDYQVLEKEQGRMLKEVLRQS
VTQAKLQEIGDESQPCLHLAASLCQLQQTVSACARLCSHHLPPPTGKLIMQIKAATVVQL
KEPGRRNQ

>gi568815590f:117420877_117639975|GENSCAN_predicted_CDS_10|747_bp
atgcctaagctagatggagagagagaagagaggacagagaagctttgcctaaggctagag
acatccttgattcagagagatttgtgccatttactatggagcagtatttcaaaaagtttc
caggtcctgaatccctttgagaatccaatggaaagtatggacatgcttcaaaaaaataaa
tgcactgtattagcccattttcacactgctgataaagacatacctgagactggacaattt
acaaaagaaaggagttcaattggcctcgcagttccacgtggatggggaggcctcacaatc
atggtggaaggcaaggaggagcaagtcacatcttacatggaggcagcggctagaatgcag
tgggacaaccatggcttgctgcaacctcgaactcctcagctcaaacaatccaacaatatt
gtgatggttaatactgactgtcaacttgattggattgaaggatacaaagtattgatcctg
gactatcaggtccttgaaaaagaacaaggaagaatgcttaaagaggtgttaaggcagtca
gttactcaagccaagctgcaggagataggggatgaatcacaaccctgcttacaccttgca
gcttcactatgtcagttgcaacaaacagtgagtgcctgtgctcgcctctgctcacatcat
ctccctccaccaacaggcaagttaattatgcaaataaaggcagcaactgttgtgcagttg
aaagagcctggtcgcagaaaccagtaa

>gi568815590f:117420877_117639975|GENSCAN_predicted_peptide_11|240_aa
MALRPDGFTAKFYQRYNEELVPFLLKLFQSIEKEGILSNSFYEASIILILKLGRDTTKKE
NFRPISLMNIDAKILNKILANRIQQHIKKLIYHDQVGFIPGMQGWFNIHKSINVMQHINR
TKDKNHVIISIDAENAFDKIQQPFMLKTLNKLGTDGTYLKIIRAICDKLTANIILNGQKL
EAFPLKTGTRQGCPLSPLLVNIVLEVLARAIRQEKEIKGIQLGKEEDKLSLFADDMIVYI

>gi568815590f:117420877_117639975|GENSCAN_predicted_CDS_11|723_bp
atggccctcagaccagatggattcacagccaaattctaccagaggtacaatgaggagctg
gtaccattccttctgaaactattccaatcaatagaaaaagagggaatcctctctaactca
ttttatgaggccagcatcatcctgatactaaagctgggcagagacacaaccaaaaaagag
aattttagaccaatatccttgatgaacattgatgcaaaaatcctcaataaaatactggca
aaccgaatccagcagcacatcaaaaagcttatctaccatgatcaagtgggcttcatccct
gggatgcaaggctggttcaacatacacaaatcaataaatgtaatgcagcatataaacaga
accaaagacaaaaaccacgtgattatttcaatagatgcagaaaatgcctttgacaaaatt
caacaacccttcatgctaaaaactctcaataaattaggtactgatgggacgtatctcaaa
ataataagagctatctgtgacaaactcacagccaatatcatactgaatgggcaaaaactg
gaagcattccctttgaaaactggcacaagacagggatgccccctctcaccactcctagtc
aacatagtgttggaagttctggccagggcaatcaggcaggagaaggaaataaagggtatt
caattaggaaaagaggaagacaaattgtccctgtttgcagatgacatgattgtgtatatc
tag