GENSCAN 1.0	Date run:  4-Nov-116	Time: 07:55:25

Sequence gi568815594r:163428751_163713504 : 284754 bp : 36.77% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +    911    987   77  1  2   90   88    51 0.566   5.91
 1.02 Term +  34289  34607  319  2  1   -2   39   235 0.167   2.97
 1.03 PlyA +  35340  35345    6                               1.05

 2.02 PlyA -  36399  36394    6                               1.05
 2.01 Sngl -  44981  43104 1878  2  0   80   37  1927 0.605 180.49
 2.00 Prom -  54087  54048   40                              -6.55

 3.10 PlyA -  54569  54564    6                               1.05
 3.09 Term -  65986  65835  152  2  2   26   43   178 0.989   4.19
 3.08 Intr -  66146  66006  141  0  0  112   89   197 0.999  21.60
 3.07 Intr -  69499  69387  113  0  2   46   97    70 0.444   2.80
 3.06 Intr -  93339  93231  109  1  1   57   94    80 0.122   3.92
 3.05 Intr -  94430  94206  225  0  0   81   87    89 0.030   5.13
 3.04 Intr - 100296 100054  243  1  0   84   56   129 0.044   5.85
 3.03 Intr - 108357 108286   72  1  0   60   98    79 0.478   4.56
 3.02 Intr - 115833 115686  148  0  1   76   50   175 0.873  11.39
 3.01 Init - 129747 129613  135  0  0   73   60    84 0.304   4.29
 3.00 Prom - 145047 145008   40                              -3.65

 4.05 PlyA - 146236 146231    6                               1.05
 4.04 Term - 155771 155673   99  2  0   75   36    94 0.955   0.05
 4.03 Intr - 157179 156999  181  2  1   86   87   180 0.982  16.65
 4.02 Intr - 184288 183521  768  0  0   72   82   409 0.262  28.36
 4.01 Init - 184691 184564  128  2  2   68  111    21 0.302   2.08
 4.00 Prom - 192850 192811   40                              -4.05

 5.00 Prom + 200451 200490   40                              -5.95
 5.01 Sngl + 204749 205405  657  1  0   71   43   374 0.931  27.12
 5.02 PlyA + 205633 205638    6                               1.05

 6.00 Prom + 205802 205841   40                              -6.15
 6.01 Init + 206749 207924 1176  0  0   70   86   403 0.049  31.77
 6.02 Term + 216263 216466  204  1  0   75   37   161 0.219   6.09
 6.03 PlyA + 216748 216753    6                               1.05

 7.00 Prom + 216781 216820   40                              -4.15
 7.01 Sngl + 216882 217055  174  2  0   56   36   177 0.705   3.94
 7.02 PlyA + 218221 218226    6                               1.05

 8.00 Prom + 231331 231370   40                              -4.15
 8.01 Init + 231508 231652  145  0  1   83   72   107 0.913   8.93
 8.02 Intr + 238626 238699   74  1  2  118   84    55 0.817   6.31
 8.03 Intr + 267687 267763   77  2  2   22   82    78 0.132  -2.01
 8.04 Term + 273327 273450  124  0  1   74   33   141 0.376   4.08
 8.05 PlyA + 274063 274068    6                               1.05

 9.02 PlyA - 275008 275003    6                               1.05
 9.01 Term - 282795 282595  201  0  0   89   32   132 0.651   4.11

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr +  86563  86711  149  1  2  104   50   132 0.958   9.96


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815594r:163428751_163713504|GENSCAN_predicted_peptide_1|131_aa
MVPASAQLLGRPHGAFTHGRRRSRSRRFCQNQYFEVLVGAVTISQLSMNNNIKNGKKYAF
LSKSRKRVIMKDNIGNDDRGIPKQISFRNKNMDFRTWKQTHLKSSMPTYQDPSKVGLPQF
EDCELHSLEAL

>gi568815594r:163428751_163713504|GENSCAN_predicted_CDS_1|396_bp
atggtgccagcatctgctcagcttctgggaaggcctcatggagcttttactcatggcaga
aggcgaagcaggagcaggaggttttgccagaaccagtattttgaagtattggttggtgct
gtgacaatttcacaactgtcaatgaataataacattaagaatggaaagaagtatgccttt
ctttcgaaaagtagaaaaagggtaattatgaaagacaatattggaaatgatgacaggggt
attcccaaacagatcagttttagaaacaaaaacatggacttcaggacctggaagcagacg
cacttaaaatcttccatgccgacataccaagatccttccaaagtaggcctacctcagttt
gaagactgtgaacttcactcgctagaagcactttaa

>gi568815594r:163428751_163713504|GENSCAN_predicted_peptide_2|625_aa
MANDAKPDVKTVQVLRDTANRLRIHSIRATCASGSGQLTSCCSAAEVVSVLFFHTMKYKQ
TDPEHPDNDRFILSRGHAAPILYAAWVEVGDISESDLLNLRKLHSDLERHPTPRLPFVDV
ATGSLGQGLGTACGMAYTGKYLDKASYRVFCLMGDGESSEGSVWEAFAFASHYNLDNLVA
VFDVNRLGQSGPAPLEHGADIYQNCCEAFGWNTYLVDGHDVEALCQAFWQASQVKNKPTA
IVAKTFKGRGIPNIEDAENWHGKPVPKERADAIVKLIESQIQTNENLIPKSPVEDSPQIS
ITDIKMTSPPAYKVGDKIATQKTYGLALAKLGRANERVIVLSGDTMNSTFSEIFRKEHPE
RFIECIIAEQNMVSVALGCATRGRTIAFAGAFAAFFTRAFDQLRMGAISQANINLIGSHC
GVSTGEDGVSQMALEDLAMFRSIPNCTVFYPSDAISTEHAIYLAANTKGMCFIRTSQPET
AVIYTPQENFEIGQAKVVRHGVNDKVTVIGAGVTLHEALEAADHLSQQGISVRVIDPFTI
KPLDAATIISSAKATGGRVITVEDHYREGGIGEAVCAAVSREPDILVHQLAVSGVPQRGK
TSELLDMFGISTRHIIAAVTLTLMK

>gi568815594r:163428751_163713504|GENSCAN_predicted_CDS_2|1878_bp
atggccaacgacgccaagcccgacgtgaagaccgtgcaggtgctgcgggacacagccaac
cgcctgcggatccattccatcagggccacgtgtgcctctggttctggccagctcacgtcg
tgctgcagtgcagcggaggtcgtgtctgtcctcttcttccacacgatgaagtataaacag
acagacccagaacacccggacaacgaccggttcatcctctccaggggacatgctgctcct
atcctctatgctgcttgggtggaggtgggtgacatcagtgaatctgacttgctgaacctg
aggaaacttcacagcgacttggagagacaccctaccccccgattgccgtttgttgacgtg
gcaacagggtccctaggtcagggattaggtactgcatgtggaatggcttatactggcaag
taccttgacaaggccagctaccgggtgttctgccttatgggagatggcgaatcctcagaa
ggctctgtgtgggaggcttttgcttttgcctcccactacaacttggacaatctcgtggcg
gtcttcgacgtgaaccgcttgggacaaagtggccctgcaccccttgagcatggcgcagac
atctaccagaattgctgtgaagcctttggatggaatacttacttagtggatggccatgat
gtggaggccttgtgccaagcattttggcaagcaagtcaagtgaagaacaagcctactgct
atagttgccaagaccttcaaaggtcggggtattccaaatattgaggatgcagaaaattgg
catggaaagccagtgccaaaagaaagagcagatgcaattgtcaaattaattgagagtcag
atacagaccaatgagaatctcataccaaaatcgcctgtggaagactcacctcaaataagc
atcacagatataaaaatgacctccccacctgcttacaaagttggtgacaagatagctact
cagaaaacatatggtttggctctggctaaactgggccgtgcaaatgaaagagttattgtt
ctgagtggtgacacgatgaactccaccttttctgagatattcaggaaagaacaccctgag
cgtttcatagagtgtattattgctgaacaaaacatggtaagtgtggcactaggctgtgct
acacgtggtcgaaccattgcttttgctggtgcttttgctgccttttttactagagcattc
gatcagctccgaatgggagccatttctcaagccaatatcaaccttattggttcccactgt
ggggtatccactggagaagatggagtctcccagatggccctggaggatctagccatgttc
cgaagcattcccaattgtactgttttctatccaagtgatgccatctcgacagagcatgct
atttatctagccgccaataccaagggaatgtgcttcattcgaaccagccaaccagaaact
gcagttatttataccccacaagaaaattttgagattggccaggccaaggtggtccgccac
ggtgtcaatgataaagtcacagtaattggagctggagttactctccatgaagccttagaa
gctgctgaccatctttctcaacaaggtatttctgtccgtgtcatcgacccatttaccatt
aaacccctggatgccgccaccatcatctccagtgcaaaagccacaggcggccgagttatc
acagtggaggatcactacagggaaggtggcattggagaagctgtttgtgcagctgtctcc
agggagcctgatatccttgttcatcaactggcagtgtcaggagtgcctcaacgtgggaaa
actagtgaattgctggatatgtttggaatcagtaccagacacattatagcagccgtaaca
cttactttaatgaagtaa

>gi568815594r:163428751_163713504|GENSCAN_predicted_peptide_3|445_aa
MTKLSSRRPILKPENLLSSPKHLLHLLKHLLRTTEKLFLLPHSEEVAAAHASVHRPEHFK
KPKGAAGIKGRPGPTIGIVDGVSVRQRGDGDSVPEKNRVHLFEGKKKSWLSVKDGHLDSV
LEWPFWTKLVVVAIGFTGGLVFMYVQCKVYVQLWRRLKAYNRVIFVQNCPDTAKKLEKNF
SCNVNTDIKDAVVVPVPQTEDQEANDILHIPMLWEDYRTVFQGSVRSSAAKPCPAVDQVD
THKAIRVLATGARTVARRPVKKLLHIGQARHGDFATICYPQGITKMIAAGEKKTRPRAKV
FYEWAEGSSGRHIYTCTKGGINNQCSSIAMSVVAKECKQFKGLSQIGLSSRNRTLPLCLL
NKSLPGNQPSGSGEQEGAHHGDVLVATEQLRTLDPGAAAHKSTRAESHVAPEKPAPTQPE
QERRVRFSKASPLTETASFSPVLGF

>gi568815594r:163428751_163713504|GENSCAN_predicted_CDS_3|1338_bp
atgaccaagttgagtagcagaagacccatcctgaagccagagaaccttctatcttctccg
aagcatctcctccacttgctcaagcatctcctcagaacaacagaaaaactcttcctactg
cctcactcagaagaggtggcagcagcacacgccagcgtgcaccgccctgagcatttcaaa
aagccgaaaggggctgcggggataaagggaaggccaggacccacgataggaattgtggat
ggggtttctgtgcgtcaaagaggggatggtgacagcgttccagaaaaaaatcgtgtccac
ttatttgaaggcaagaaaaagagctggctgtctgttaaagatggtcatttggacagtgtc
cttgaatggccattttggacaaaactggttgtggtagccattggcttcacaggaggtctt
gtcttcatgtacgtacagtgtaaagtctatgttcagttgtggcgcaggctgaaggcctac
aaccgtgtgatctttgtacaaaattgcccagacactgccaaaaaactggagaagaacttc
tcatgtaatgtaaacacagacatcaaagatgctgtggtagtgcctgtaccacaaacagaa
gatcaggaggcaaatgatatcctccatatccccatgctctgggaagattataggacagtc
ttccaaggctcagtcaggtcatccgcagcaaaaccctgcccagctgtggatcaagtggac
acacacaaggccatcagggtgctggcaacaggagcaagaacagtggcaagaaggccagtt
aagaagctactgcacataggacaggcaagacatggcgactttgccactatttgttatcca
caaggaatcactaaaatgattgctgcaggggagaagaaaactaggccacgagctaaagta
ttctatgaatgggcagaaggttcttctgggagacatatttacacgtgtaccaaagggggg
ataaataatcaatgcagcagtattgcaatgtctgtggtagcaaaagaatgtaaacaattt
aaaggtctatcacagatcgggttaagttcccgaaaccgcaccctccctctctgcctgctc
aacaagagccttccggggaaccaaccgagcggttcgggggagcaggagggggcccaccat
ggtgacgtcctcgtggccacggagcagctccgcactctagacccaggagcagcagctcac
aagagcacccgggccgaatcccacgtggcgcctgagaagcccgcgccgacccaaccggaa
caggagaggcgagtgcgtttctctaaagcgtccccgttaactgagaccgcgtctttttcg
cccgtgttgggcttttaa

>gi568815594r:163428751_163713504|GENSCAN_predicted_peptide_4|391_aa
MYYLNQDAKLSNLFLQASSPTTGTAPRSQSRLSVCPSTQDICRSAILHDMSEESFEYCTP
VMVLSPARKESGKKSVIQRPRRRRKASERYEHAAEEQIRGRKNDFHLQISSPRWRELYTD
SSDSSSTDESHWIQAKRRAQVKFRLSRRRRRNNNKPCENLAGSSTPNGIELVDLGSKGKE
QQELIECESCSLNLHRGKHTRYQECNPSLTQGSSEIKRSSRNHEKSKGRYHHRDPQLLQS
LRKNEIMKKTFSETDSSTEILGVPEGSKDMNDAGLQVNNPVQKPPATYDDGSDNLEVCRI
CHCEGDEESPLITPCRCTGTLRFVHQSCLHQWIKSSDTRCCELCKYDFIMETKLKPLRKG
PEVSMPEIEMDPDSLSFASSAGQMLSIVCSS

>gi568815594r:163428751_163713504|GENSCAN_predicted_CDS_4|1176_bp
atgtattaccttaaccaagatgccaaattatctaacttgtttctccaggcaagcagccca
acaacagggacagctcccaggagccagtcaaggttgtctgtctgtccatccactcaggac
atctgcagatctgccatcttgcatgacatgtcagaagagtcatttgagtattgcacccct
gtcatggtgctgagccctgctaggaaggagtctggtaagaaatcagtaatacaaagacct
aggaggaggagaaaagcctctgagagatatgagcatgctgcagaagaacaaataagaggg
agaaaaaatgactttcaccttcaaatctcaagccccaggtggagggagctttacacagat
tcttcagattcatcttccacagatgagagtcattggattcaggcaaaaagaagagcccag
gttaaattcagactgtcaagaagaaggaggagaaataataataagccgtgtgaaaactta
gctgggtcttccactcctaacggaattgagctcgttgatctgggatccaaaggtaaagag
caacaagagctgattgaatgtgagagttgctctttaaatctccacagaggaaaacataca
aggtaccaagaatgcaacccttctctgactcaagggtcctctgaaattaagagatcctca
aggaatcatgagaagagcaaaggcagatatcaccacagagatcctcagctcttgcaaagt
cttaggaaaaatgaaataatgaagaagacattttcagaaacagattccagcactgaaata
ctgggagttccagaaggcagcaaggacatgaatgatgcagggctccaggtgaataaccct
gttcagaagcctcctgccacctatgacgatgggtctgataatttagaagtatgcagaatc
tgtcactgcgaaggggatgaagagagccccctcatcacaccctgtcgctgcactgggaca
ctgcgctttgtccaccagtcctgcctccaccagtggataaagagctcagatacacgctgc
tgtgagctctgcaagtatgacttcataatggagaccaagctcaaacccctccggaagggc
ccagaggtgtcaatgccagaaatagaaatggaccctgattccttgtcctttgcttcatcc
gctggacagatgctgagcattgtctgcagtagttaa

>gi568815594r:163428751_163713504|GENSCAN_predicted_peptide_5|218_aa
MEDEMNEMKREGKFREKRIKRNEQSLQEIWDYVKRPNLRLIGIPESDGENGTKLENTLQD
IIQENFPNLARQDNIQIQEIQRMPQRYSSRRATPRHIIVRFTKVEMKEKMLRAAREKGRV
TLKGKPIRLTADLMADTLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGVIKYFTDK
QMLRDSVTTRPALKELLKEALNMERNNRYQLLQNHAKM

>gi568815594r:163428751_163713504|GENSCAN_predicted_CDS_5|657_bp
atggaagatgaaatgaatgaaatgaagcgagaagggaagtttagagaaaaaagaataaaa
agaaatgagcaaagcctccaagaaatatgggactatgtaaaaagaccaaatctacgtctg
attggtatacctgaaagtgatggggagaatggaaccaagttggaaaacactctgcaggat
attatccaggagaacttccccaatctagcaaggcaggacaacattcagattcaggaaata
cagagaatgccacaaagatactcctcgagaagagcaactccaagacacataattgtcaga
ttcaccaaagttgaaatgaaggaaaaaatgttaagggcagccagagagaaaggtcgggtt
accctcaaagggaagcccatcagactaacggcggatctcatggcagacaccctacaagcc
agaagagagtgggggccaatattcaacattcttaaagaaaagaattttcaacccagaatt
tcatatccagccaaactaagcttcataagtgaaggagtaataaaatactttacagacaag
caaatgctgagagattctgtcaccaccaggcctgccctaaaagagctcctgaaggaagca
ctaaacatggaaaggaacaaccggtaccagctgctgcaaaatcatgccaaaatgtaa

>gi568815594r:163428751_163713504|GENSCAN_predicted_peptide_6|459_aa
MDKFLDTYTLPRLNQEEVESPNRPITGAEIVAIINSLPTKKSPGPDGFTAEFYQRYKEEL
VPFLLKLFQSIEKEGILPNSFHEASIILIPKPGRHTTKKENFRPISLMNIDAKILNKILA
KRIQQHIKKLIHHDQVGFIPGMQGWFNICKSINVIQHINRAKDKNHMIISIDAEKAFDKI
QQPFMLKTLNKLGIDGTYFKTIRAIYDKPTANIILNGKKLEAFRLKTGTRQGCPLSPPLF
NIVLEVLARAIRQEKEIKGIQLGKEEVKLSLFADDMIVYLENPIVSAQSLLKLISNFSKV
SGYKINVQKSQAFLYTNNRQTESQIMSELPFTIASKRIKYLGIQLTRDVKDLFKENYKPL
LKKIKEDTNKWKNIPCSWVGRINIVKMAILPKLQPRQYCLPRDPPSDIAEALPGTWRKPH
LSINLVTGPLSSDSKVDPHPSTSPTDQGPEDSSVHLGTT

>gi568815594r:163428751_163713504|GENSCAN_predicted_CDS_6|1380_bp
atggataaattccttgacacatatactctcccaagactaaaccaggaagaagttgaatct
ccgaatagaccaataacaggagctgaaattgtggcaataatcaatagcttaccaaccaaa
aagagtccaggaccagatggattcacagccgaattctaccagaggtacaaggaggaactg
gtaccattccttctgaaactattccaatcaatagaaaaagagggaatcctccctaactca
tttcatgaggccagcatcattctgataccaaagccaggcagacacacaaccaaaaaagag
aattttagaccaatatccctgatgaacattgatgcaaaaatcctcaataaaatactggca
aaacgaatccagcagcacatcaaaaagcttatccaccatgatcaagtgggcttcatccct
gggatgcaaggttggttcaatatatgcaaatcgataaatgtaatccagcatataaacaga
gccaaagacaaaaaccacatgattatctcaatagatgcagaaaaggcctttgacaaaatt
caacaacccttcatgctaaaaactctcaataaattaggtatcgatgggacgtatttcaaa
acaataagagctatctatgacaaacccacagccaatatcatactgaatgggaaaaaactg
gaagcattccgtttgaaaaccggcacaagacagggatgccctctctcaccacccctattc
aacatagtgttggaagttctggccagggcaattaggcaggagaaggaaataaagggtatt
caattaggaaaagaggaagtcaaattgtccctgtttgcagatgacatgattgtatatcta
gaaaaccccattgtctcagcccaaagtctccttaagctgataagcaacttcagcaaagtc
tcaggatacaaaatcaatgtgcaaaaatcacaagcattcctatacaccaacaacagacaa
acagagagccaaatcatgagtgaactcccattcacaattgcttcaaagagaataaaatac
ctaggaatccaacttacaagggatgtgaaggacctcttcaaggagaactacaaaccactg
ctcaagaaaataaaagaggatacaaacaaatggaagaacattccatgctcatgggtagga
agaatcaatattgtgaaaatggccatactgcccaagttacaaccaaggcagtactgcctg
cccagggacccacccagtgacatagcagaagccctcccaggaacctggaggaagccacat
ttatccataaacctggtaacaggcccattgtcttcagactcaaaagtggaccctcatccc
agtaccagccctacagaccaaggtcctgaagatagttcagtccacctagggaccacatag

>gi568815594r:163428751_163713504|GENSCAN_predicted_peptide_7|57_aa
MHEHNEKFNKDIKLKNTKTEVKNSIESFSSRLNHGEERIKKLEDRSFEICQFKEQKE

>gi568815594r:163428751_163713504|GENSCAN_predicted_CDS_7|174_bp
atgcacgaacacaatgagaagtttaataaagatataaagctgaagaatacaaagacagaa
gtaaaaaactcaatagagagcttcagcagcagactcaatcatggagaagaaagaattaaa
aagcttgaagacagatcatttgaaatttgccaattcaaggaacaaaaagaataa

>gi568815594r:163428751_163713504|GENSCAN_predicted_peptide_8|139_aa
MDEGGSHYSQQTDTGTENQTLHVLIHKWELNNENTWTQGEECHTPGPVVISSTTTKIPYI
LEDVENSVLQIEHINFSVSKPDDTSVTAVEHQDSHELPWLTDIPAEQYFFLYMQHPSHTT
TDVTVEHVITDRDESQRYG

>gi568815594r:163428751_163713504|GENSCAN_predicted_CDS_8|420_bp
atggatgaaggtggaagccattattctcagcaaactgacacaggaacagaaaaccaaaca
ctgcatgttctcattcataagtgggagttgaacaatgagaacacatggacacaaggagag
gaatgtcacacaccggggcctgtcgtgatatcttcgacaacaacaaaaataccatatata
ttagaagatgttgaaaatagtgttctacagattgaacatatcaatttctctgtttctaag
ccagatgacacttcagtgactgctgttgagcaccaagactctcatgaacttccctggctt
acagatattccagctgaacagtactttttcctttacatgcaacatccatctcatacaacc
actgatgtcactgtggagcatgttattacagaccgagatgagtcacaacgatacggttag

>gi568815594r:163428751_163713504|GENSCAN_predicted_peptide_9|66_aa
DSALILIGVMKLKARSKGALVRSNRVCLLGTDQGGEQWDMDLHGLVEDTPSTPVKITFET
QMNMIL

>gi568815594r:163428751_163713504|GENSCAN_predicted_CDS_9|201_bp
gactctgcattaattctcattggtgtaatgaaactgaaagccaggagcaaaggagccttg
gtgagatccaaccgggtgtgcctcctgggcacagatcagggtggggaacagtgggacatg
gatctacacggactggtggaagatacacctagcacacctgtgaaaataacatttgaaacg
caaatgaacatgatactttaa