GENSCAN 1.0	Date run:  4-Nov-116	Time: 07:48:46

Sequence gi568815586r:66037963_66269951 : 231989 bp : 39.93% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.05 PlyA -    705    700    6                               1.05
 1.04 Term -   2804   2680  125  0  2  102   43    52 0.409  -0.33
 1.03 Intr -   6588   6439  150  1  0   72   37    93 0.427   1.81
 1.02 Intr -   7008   6833  176  2  2   37  108   206 0.388  16.16
 1.01 Init -  15612  15605    8  0  2   59   86     0 0.018  -2.66
 1.00 Prom -  31692  31653   40                              -2.95

 2.00 Prom +  32410  32449   40                              -2.95
 2.01 Init +  38033  38087   55  1  1   29   91    50 0.561   0.90
 2.02 Intr +  38203  38309  107  2  2  137  100   126 0.820  17.71
 2.03 Term +  56042  56140   99  1  0  107   47    52 0.006   0.15
 2.04 PlyA +  56229  56234    6                               1.05

 3.02 PlyA -  56440  56435    6                               1.05
 3.01 Sngl -  59226  57964 1263  0  0   70   48   430 0.965  32.82
 3.00 Prom -  60479  60440   40                              -6.15

 4.00 Prom +  67613  67652   40                              -1.65
 4.01 Init +  89085  89157   73  2  1   82   75    73 0.944   6.68
 4.02 Intr +  92099  92235  137  0  2  103   68    47 0.615   3.57
 4.03 Intr +  92474  92724  251  1  2  -23   93   212 0.417   5.91
 4.04 Intr +  92957  93013   57  2  0   49   96    94 0.643   3.38
 4.05 Term + 121328 121472  145  2  1   42   42   113 0.009  -1.50
 4.06 PlyA + 121602 121607    6                               1.05

 5.00 Prom + 122359 122398   40                              -7.55
 5.01 Init + 125540 125714  175  1  1   72  100    69 0.754   6.06
 5.02 Intr + 131096 131297  202  0  1   86   10   184 0.553   7.82
 5.03 Term + 131797 132211  415  1  1   26   45   306 0.942  13.85
 5.04 PlyA + 133939 133944    6                               1.05

 6.02 PlyA - 137661 137656    6                               1.05
 6.01 Sngl - 151546 151181  366  1  0   91   48   457 0.930  35.84
 6.00 Prom - 152396 152357   40                              -7.55

 7.00 Prom + 153494 153533   40                              -3.15
 7.01 Init + 153727 153780   54  0  0   86   91    48 0.283   6.24
 7.02 Intr + 163814 163936  123  1  0   42   60    78 0.074   0.26
 7.03 Intr + 172185 172239   55  2  1   70   86    83 0.418   3.93
 7.04 Intr + 173484 173635  152  1  2   86   80    51 0.527   3.06
 7.05 Intr + 190339 190462  124  0  1   41   84    81 0.400   2.24
 7.06 Term + 192299 192477  179  0  2  120   48    76 0.749   3.67
 7.07 PlyA + 193391 193396    6                              -0.45

 8.02 PlyA - 193410 193405    6                               1.05
 8.01 Sngl - 197325 196111 1215  0  0   83   36  1139 0.984 103.75
 8.00 Prom - 199475 199436   40                              -9.15

 9.00 Prom + 199858 199897   40                              -8.55
 9.01 Init + 200566 200711  146  0  2   32   81   164 0.192   9.74
 9.02 Intr + 206524 206722  199  1  1   43   68   138 0.211   5.73
 9.03 Intr + 206986 207048   63  0  0   93   99    38 0.610   3.40
 9.04 Intr + 209733 210092  360  2  0  109   94   170 0.540  14.19
 9.05 Term + 210556 210648   93  0  0   73   28   120 0.524   1.35
 9.06 PlyA + 212144 212149    6                               1.05

10.00 Prom + 213612 213651   40                              -7.55
10.01 Init + 213999 214150  152  2  2   67   74   152 0.956  11.26
10.02 Intr + 214635 214707   73  0  1   63   92    14 0.738  -2.21
10.03 Intr + 219782 219877   96  1  0  111   72    21 0.732   2.09
10.04 Intr + 220173 220334  162  2  0   78   14   111 0.493   1.95
10.05 Term + 222231 222290   60  2  0   95   42   108 0.447   3.73
10.06 PlyA + 222392 222397    6                               1.05

11.03 PlyA - 223496 223491    6                               1.05
11.02 Term - 229240 228980  261  1  0   96   42    96 0.329   0.34
11.01 Intr - 231193 231074  120  1  0   51   75   114 0.540   6.17

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586r:66037963_66269951|GENSCAN_predicted_peptide_1|152_aa
MVSFDETHRKALISGLDRQLFSHSPAGSSAQGVEDESRPLMLAATSGTLVAAKSKALCKT
PIWAEKHPYGSMAVKMIQARACPAVVGMSFLGPEASCCSAADGYHFASAPTVLNHITPEA
SNSGPGCRHQPHIFPVPSSLSFVVQQHQIAVF

>gi568815586r:66037963_66269951|GENSCAN_predicted_CDS_1|459_bp
atggtaagttttgatgaaacccacaggaaagctctcatcagcggcttggacagacagctc
ttctctcacagccctgccggatcatctgcacagggagtggaggatgaatcacgtcctctt
atgcttgcagctaccagcggtactctggtggcagcaaagtccaaggctctctgtaagact
ccaatatgggctgagaaacacccttatgggagtatggctgttaaaatgatacaggcaagg
gcctgcccagcagttgttggaatgtctttcctggggccagaagcatcttgttgttctgct
gcagatggttaccactttgcctcagcccccacagttcttaatcacataaccccagaagcc
tcaaattctggccctggatgccggcatcagcctcatatttttccagtcccttccagcctt
agctttgtggtgcagcaacaccaaattgctgttttctga

>gi568815586r:66037963_66269951|GENSCAN_predicted_peptide_2|86_aa
MTLKKPLPTTAATCRTKAGLTMDLALAHSGPETSEEGDSWKCVAEETGEAGVAKESKWYK
ERISSSERHGFKLYLEGILLSKYWTI

>gi568815586r:66037963_66269951|GENSCAN_predicted_CDS_2|261_bp
atgactctcaaaaagccattaccaactacagcagccacttgcaggaccaaagcaggtctc
accatggatctcgcactggcccactcaggcccagaaacaagtgaagagggagattcttgg
aaatgtgttgcagaagagactggggaagctggggtggcaaaggaatctaaatggtataag
gaaagaatatccagctctgaaagacatggattcaaactctatttagaagggatcctgctg
tccaaatattggacaatttga

>gi568815586r:66037963_66269951|GENSCAN_predicted_peptide_3|420_aa
MDKFLDTYTLPRLNQEEVESLNRPITGSEIEAIINSLPTKKSPGPEGFTVEFYQRYKEEL
VPFFLKLFQSIEKEGILPNSFYEASIILIPKPDRDTTKKENFRPISLMNIDAKICNKILA
NRIQQHIEKLIHHDQVGFIPGMQGWFNIRKSINVIQHINRTNDKNHMIISIDAEKAFDKI
QWPFMPKTLNKLGIDGAYLKIIRAVYDKPTANIILNGQKLEAFPLKTGTRQGCPLSPLLF
NIVLEVLARAIRQEKEIKSIQLGKEEVKLSLFADDVIVYLENPIVSAQNLLKLISNFSKV
SGYKINVQKSQAFLYTNNRQTESQIMSELPFTIASKRIKCLGIQLTRDMKDLFKENYKPL
LNEIKEDTNKWKNIPCSWIGRINIVKMAILPKVIYRFNDIPIKLPMTFFTELEKTTLKFI

>gi568815586r:66037963_66269951|GENSCAN_predicted_CDS_3|1263_bp
atggataaattcctcgacacatacaccctcccaagactaaaccaggaagaagttgaatct
ctgaatagaccaataacaggctctgaaattgaggcaataattaatagcttaccaaccaaa
aaaagtccaggaccagagggattcacagtcgaattctaccagaggtacaaggaggagctg
gtaccattctttctgaaactattccaatcaatagaaaaagagggaatcctccctaactca
ttttatgaggccagcatcatcctgataccaaagcctgacagagacacaacaaaaaaagag
aattttagaccaatatccctgatgaacatcgatgccaaaatctgcaataaaatactggca
aaccgaatccagcagcacatcgagaagcttatccaccatgatcaagtgggcttcatccct
gggatgcaaggctggttcaacatacgcaaatcaataaatgtaatccagcatataaacaga
accaatgacaaaaaccacatgattatctcaatagatgcagaaaaggcctttgacaaaatt
caatggcccttcatgccaaaaactctcaataaattaggtattgatggggcgtatctcaaa
ataataagagctgtttatgacaaacccacagccaatatcatactgaatgggcaaaaactg
gaagcattccctttaaaaactggcacaagacagggatgccctctctcaccactcctattc
aacatagtgttggaagttctggccagggcaatcaggcaggagaaagaaataaagagtatt
caattaggaaaagaggaagtcaaattgtccctgtttgcagatgatgtgattgtatatcta
gaaaaccccatcgtctcagcccaaaatctccttaagctgataagcaacttcagcaaagtc
tcaggatacaaaatcaatgtacaaaaatcacaagcattcttatacaccaataacagacaa
acagagagccaaatcatgagtgaactcccattcacaattgcttcaaagagaataaaatgc
ctaggaatccaacttacaagggatatgaaggacctcttcaaggagaactacaaaccactg
ctcaatgaaataaaagaggacacaaacaaatggaagaacattccatgctcatggatagga
agaatcaatattgtgaaaatggccatactgcccaaggtaatttatagattcaatgacatc
cccatcaagctaccaatgactttcttcacagaattggaaaaaactactttaaagttcata
tga

>gi568815586r:66037963_66269951|GENSCAN_predicted_peptide_4|220_aa
MAIIRKWKTSISEDVKKLKYSNTAGTNYVCKESKLSLRQCLHICCPYAWQLLFSRLAPSF
ATSERTPLTSESGRQTTLRAEVNFSGSERQGWAPLYPVHSEAGGPPPKRARGTLALNKAC
ISGLELKYSPASVKKRNSPRVAESSPKSHVSLDRCRSRIWRMLTGVRSRLGPRGSQLPCH
EDTEAALWRGSCGKELRPPVSSHGNEISQKQILQPSQAFM

>gi568815586r:66037963_66269951|GENSCAN_predicted_CDS_4|663_bp
atggctataatccgaaaatggaaaacaagtattagtgaggatgtgaagaaactcaaatac
tcaaacactgcaggcaccaactacgtctgtaaagagtccaaactatctctacgtcagtgc
cttcatatttgctgtccctatgcctggcaactgctcttctcaaggcttgctccttcattc
gctacctcagaaaggactcctctgacctccgaaagcgggcggcaaacaaccttgagggcc
gaagttaacttcagcgggagtgaacgacaggggtgggctccactttatccagtgcactcg
gaagccggagggcccccaccaaaaagagcaaggggaaccctcgccctcaacaaggcctgc
atctccggactggagctcaagtatagcccagcgagtgtcaagaaacgaaattctccaagg
gtggcggaatcaagccccaagtcccatgtgtcactggaccggtgtagaagtcggatttgg
agaatgctgacgggtgtccggtcaaggttaggccccagaggaagtcagctgccatgtcat
gaggacactgaagcagccctatggagaggttcatgtggcaaggaactgaggcctccagtc
agtagccatgggaatgaaatttcccaaaagcagatcctccagcccagtcaagccttcatg
tga

>gi568815586r:66037963_66269951|GENSCAN_predicted_peptide_5|263_aa
MAERGNAKQKGERALIKPSDLVRTYYHKNSMKVTAPVIKLPPTWSLPQHVGMMGMTTQEQ
VLGTKILSTSELSSSFLFQNKFQLPKQAESLGLFRRSNDQTRAGNGFHVDEAEHFKFKNF
CPLATTRWPLSLGSRKSASRGRAVQTSGWEALERGQRTHSDVHGGGGHAAAIVEVVLDRG
ARVPGVGVSHDGNSTPTGPGPLTATASSPLPRGRAQPQQAVRRRRANTERVDFLASKIPA
GRRKRGWLRVRMEEKTVYIPGVI

>gi568815586r:66037963_66269951|GENSCAN_predicted_CDS_5|792_bp
atggcagaaaggggaaatgccaagcaaaagggggaaagggcccttataaaaccatcagat
cttgtgagaacttactatcacaagaacagcatgaaggtaactgcccctgtgattaaatta
cctcccacctggtccctcccacaacacgtggggatgatgggaatgacaactcaagaacaa
gttctaggcactaagattcttagcacatcagaactatcttcatctttccttttccagaac
aagttccagctgcctaaacaggctgaaagtctggggctgtttcggcgatcaaatgaccaa
actagagcaggcaatggcttccacgtagatgaagctgagcattttaaattcaaaaatttc
tgcccattggctactacgagatggccgctctccctcggaagccggaagtcggcttctaga
ggccgagcagtgcagacaagcggctgggaggcactggagaggggacaacgtacccattcg
gatgtgcacggtggcggaggccacgctgctgccatagttgaagtcgtcctcgatcgagga
gcgagggtaccgggggtcggggtcagccatgatggcaacagcacccctaccggtcccggt
ccactaaccgcaaccgcctcctccccacttccgcgaggaagagcccagccccagcaagcc
gtgcggcgtcggcgggcgaacaccgagcgagtcgattttctcgcttcaaaaattccagct
gggcggagaaagcggggatggctccgagttagaatggaagagaaaacggtttacattccc
ggcgtcatctga

>gi568815586r:66037963_66269951|GENSCAN_predicted_peptide_6|121_aa
MQGDAERAPRRAGLPRRPRPVPADSPRPRQPSAPSQLSRTAQSSPSSAGGRSNSSVCADS
APRAPQFPAMARLPEPRGRGGVQVPARLRQAVTQPRKSCFHDGSRALGTRRSPVTAGAVP
T

>gi568815586r:66037963_66269951|GENSCAN_predicted_CDS_6|366_bp
atgcagggcgacgccgagcgggccccgcggcgcgctgggctcccccgccgcccccggccg
gtccccgccgactcacccaggccgcgccagcccagcgcgccgtcgcagctgtccagaaca
gcgcagagctctccgagcagcgcgggcggcaggtcgaacagcagcgtgtgcgccgacagc
gcgccgcgggccccacagttccccgccatggctcggctgcccgagccccggggacgaggc
ggagtccaggtccctgcacgcctgcgacaggccgttacacaaccgcggaaatcctgcttc
cacgacggcagcagagccctaggaacacgccgttctccggtcactgcaggggcggtgccc
acgtga

>gi568815586r:66037963_66269951|GENSCAN_predicted_peptide_7|228_aa
MPSFPVGTAKGERGEEVQILAFNCSKVFNGKTGGTKHHFSNLQQLNLTVLRMNNNHTEGE
TANVTVDNVLIPEHNEKGILLKSSISFQNIIEGTRNFHKDFLIGEGEIFEVYRVEIQNLT
YAVKLFKQEYPKPFTTCTTFNHARSSVAVYQGKLFQSFWLYLKASFILTCRSRKWAQKHR
FTCRRFLREGSQGQQMKRGKEKGRIGQLERLSWDIIVIEASVHAMGKH

>gi568815586r:66037963_66269951|GENSCAN_predicted_CDS_7|687_bp
atgccgagttttcctgtgggcacagcgaagggagaaagaggggaagaggtgcagatatta
gcttttaattgctcaaaagtgttcaatgggaagacagggggaacaaaacaccatttctca
aaccttcaacagctgaatctaactgtattacgaatgaataataaccacactgaaggggaa
acagccaatgtcaccgtggataatgttcttattcctgaacataatgaaaaaggaatactg
cttaaatcttccatcagctttcaaaatatcatagaaggaactagaaatttccacaaagac
ttcctaattggagaaggagagatttttgaggtatacagagtggagattcaaaacctaaca
tatgctgtcaaattatttaaacaggaatatccaaagccattcactacctgcacaacgttc
aaccatgctcggtcatctgtggcagtatatcaaggtaaattattccagagcttttggtta
tacctgaaagcttcttttatcctcacatgtaggtccaggaagtgggctcagaagcacaga
tttacctgcaggaggtttttaagggagggctctcagggacagcaaatgaagcgaggaaag
gaaaaaggcaggattgggcagctggagaggttgagttgggatattattgtcatagaggcc
tcagtccatgccatggggaagcactga

>gi568815586r:66037963_66269951|GENSCAN_predicted_peptide_8|404_aa
MIFPSSSGNPGGSSNCRTPYRKQQSLVPAHPMAPPSPSTTSSNNNSSSSSNSGWDQLSKT
NLYIRGLPPHTTDQDLVKLCQPYGKIVSTNAILHKTTNKCKGYGFVDFDSPAAAQKAVSA
LKASGVQAQMAKQQEQDPTNLYISNLPLSMDKQELENMLKPFGQVISTRILRDASGTSRG
VGFARTESTEKCEAVTGHFNGKFIKTPPGVSAPTEPLLCKFSDGGQKKRQNPNKYIPNGR
PWHREGEVRLTGMTLTYDPTTAAIQNGFYPSPYSIATNRMITQTSITPYIVSPVSAYQVQ
SPSWTQPQPYILQHPGAVLTPSMEHTMSLQPASMISPLAQQMSHLSLGSTGTYMPATSAM
QGAYLPQYEHMQTTAAPVEEASGQQQVAVETSNDHSPYTFQPNK

>gi568815586r:66037963_66269951|GENSCAN_predicted_CDS_8|1215_bp
atgatcttccccagcagcagcggcaaccccgggggcagcagcaactgccggacgccctat
cgcaagcagcagtctctggtcccagcccaccccatggcccctcccagtcccagcaccacc
agcagtaataacaacagtagcagcagcagcaactcaggatgggatcagctcagcaaaacg
aacctctatatccgaggactgcctccccacaccaccgaccaggacctggtgaagctctgt
caaccatatgggaaaatagtctccacaaacgcaattttgcataagacaacgaacaaatgc
aaaggttatggttttgtcgactttgacagccctgcagcagctcaaaaagctgtgtctgcc
ctgaaggccagtggggttcaagctcaaatggcaaagcaacaggaacaagatcctaccaac
ctctacatttctaatttgccactctccatggataagcaagaactagaaaatatgctcaaa
ccatttggacaagttatttctacaaggatactacgtgatgccagtggtacaagtcgtggt
gttggctttgctaggacggaatcaacagaaaaatgtgaagctgttactggtcattttaat
ggaaaatttattaagacaccaccaggagtttctgcccccacagaacctttattgtgtaag
ttttctgatggaggacagaaaaagagacagaacccaaacaaatacatccctaatggaaga
ccatggcatagagaaggagaggtgagacttactggaatgacacttacttacgacccaact
acagctgctatacaaaacggattttatccttcaccatacagtattgctacaaaccgaatg
atcactcaaacttctattacaccctatattgtatctcctgtatctgcctaccaggtgcaa
agtccttcttggacgcaacctcaaccatatattctacagcaccccggtgccgtgttaact
ccctcaatggagcacaccatgtcactacagcccgcatcaatgatcagccctctggcccag
cagatgagtcatctgtcactaggcagcaccggaacatacatgcctgcaacgtcagctatg
caaggagcctacttgccacagtatgaacatatgcagacgacagcggctcctgttgaggag
gcaagtggtcaacagcaggtggctgtcgagacgtctaatgaccattctccatataccttt
caacctaataagtaa

>gi568815586r:66037963_66269951|GENSCAN_predicted_peptide_9|286_aa
MEACWRHQQRQGNWEGEESIISVQKLGNADIGLLAEARGIEEEIGPGKRANILLDDQFQP
KLTDFAMAHFRSHLEHQSCTINMTSSSSKHLWYMPEEYIRQGKLSIKTDVYSFGIVIMEV
LTGCRVVLDDPKHIQLVLNTLESTQASLYFAEDPPTSLKSFRCPSPLFLENVPSIPVEDD
ESQNNNLLPSDEGLRIDRMTQKTPFECSQSEVMFLSLDKKPESKRNEEACNMPSSSCEES
WFPKYIVPSQDLRPYKCESSEPPSAKNIQLDSIVWFSLLARVVGNV

>gi568815586r:66037963_66269951|GENSCAN_predicted_CDS_9|861_bp
atggaagcatgttggcgtcatcagcagagacagggaaattgggaaggagaggagagcata
attagtgtgcagaaacttggaaatgctgacattggactcctggcagaagcaagaggcatt
gaagaggagatcgggcctggaaagcgtgcaaacatccttttggatgatcagtttcaaccc
aaactaactgattttgccatggcacacttccggtcccacctagaacatcagagttgtacc
ataaatatgaccagcagcagcagtaaacatctgtggtacatgccagaagagtacatcaga
caggggaaactttccattaaaacagatgtctacagctttggaattgtaataatggaagtt
ctaacaggatgtagagtagtgttagatgatccaaaacatatccagctggttttaaatact
cttgaaagtactcaagccagcttgtattttgctgaagatcctcccacatcactaaagtcc
ttcaggtgtccttctcctctattcctggagaatgtaccaagtattccagtggaagatgat
gaaagccagaataacaatttactaccttctgatgaaggcctgaggatagacagaatgact
cagaaaactccttttgaatgcagccagtctgaggttatgtttctgagcttggacaaaaag
ccagagagcaagagaaatgaggaagcttgcaacatgcccagttcttcttgtgaagaaagt
tggttcccaaagtatatagttccatcccaggacttaaggccctataagtgtgagtcctca
gagcctccatctgccaagaacattcagttggattccatcgtttggtttagcttgcttgca
cgggttgtaggaaatgtctaa

>gi568815586r:66037963_66269951|GENSCAN_predicted_peptide_10|180_aa
MKKASWRRFLKRDTELREIEKSTDEALRMAIQGIGDPQQLCTTIPNARKMGHYSRSWGYS
ADGNQQSSLPSWSLYRQESPSVAQASLKLLESSNPPASASQNAGITGLRHLATVITTSDF
DAEKPTHNFHPCCHGHLIPPTPDLMLLALNLEPSCFEKYCLICVIDHFGKAAFIIHEIVD

>gi568815586r:66037963_66269951|GENSCAN_predicted_CDS_10|543_bp
atgaagaaggcttcttggagaaggtttctgaaaagagatacggaattaagagaaatagaa
aagagcactgacgaagcactcaggatggctattcaaggaattggggatccacagcagctg
tgcacaaccatccctaatgccagaaaaatggggcactattctaggagctggggctacagt
gcagatggaaaccagcaaagctcactgccctcatggagcttatatagacaggagtctccc
tctgttgctcaggctagtctcaaactcctggaatcaagcaatccacctgcttcagcctct
caaaatgctgggattacagggctcaggcacttggccacagtgataaccacatcagacttc
gatgcagaaaagcccacacataactttcatccctgttgccatggccacctaataccccct
acaccagacttaatgcttctggcactgaatctggaacccagttgttttgaaaagtattgt
cttatttgtgtcattgaccactttggtaaagctgctttcatcatccacgaaattgttgat
taa

>gi568815586r:66037963_66269951|GENSCAN_predicted_peptide_11|126_aa
QRRGKTHYLNDKNHNYFCTNLIEAQRMAASEETEEEEMKKTWGYLQRECRDTQWGLCPLT
QCMAHWLLSSTSPEVLHPSWRQGDPPPHSHRPPPPPTAEGEESRSGNLHIRMPLGPGSVL
ARVCLF

>gi568815586r:66037963_66269951|GENSCAN_predicted_CDS_11|381_bp
cagcggcgaggtaaaacccattaccttaatgacaaaaatcacaattacttctgcaccaac
ctaatagaagcccagagaatggcagcctctgaggaaacagaggaggaagaaatgaagaag
acatggggatatttgcagagggagtgcagagacacccagtgggggctctgtcccctgact
cagtgcatggcccactggcttctgagttctacctcccctgaagtgctgcaccccagctgg
agacagggagatccacctcctcattcccacaggccaccgcccccacccacagcagaaggg
gaagaatcaaggagtggcaacctccacatcaggatgcccttgggacctggatcagtattg
gcaagagtctgtctgttttga