GENSCAN 1.0	Date run:  4-Nov-116	Time: 07:40:28

Sequence gi568815581f:74492047_74692775 : 200729 bp : 47.42% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  12620  12904  285  1  0   95   65   126 0.464   8.54
 1.02 Intr +  20176  20379  204  0  0    7   75   104 0.068   0.40
 1.03 Term +  25021  25170  150  0  0   80   43    62 0.292  -1.19
 1.04 PlyA +  25957  25962    6                               1.05

 2.16 PlyA -  27019  27014    6                               1.05
 2.15 Term -  30854  30692  163  1  1  125   44   177 0.996  14.41
 2.14 Intr -  31605  31533   73  1  1   78  105    63 0.977   5.46
 2.13 Intr -  34031  33702  330  0  0   79  110   241 0.939  21.00
 2.12 Intr -  49690  49557  134  0  2  104   76   120 0.509  12.69
 2.11 Intr -  50941  50815  127  2  1   76   82    78 0.986   5.74
 2.10 Intr -  52901  52563  339  0  0   48   88   336 0.976  25.05
 2.09 Intr -  57497  57367  131  1  2  107   76   143 0.815  15.34
 2.08 Intr -  70851  70788   64  1  1   84   60     8 0.061  -4.62
 2.07 Intr -  72328  71873  456  2  0   91   94   345 0.685  28.59
 2.06 Intr -  77715  77596  120  1  0   96   56    33 0.585   1.37
 2.05 Intr -  78247  78085  163  1  1   -2   98    80 0.033  -0.45
 2.04 Intr -  88067  87983   85  1  1  100   32   118 0.238   7.22
 2.03 Intr -  88571  88454  118  0  1   45   98    55 0.314   1.72
 2.02 Intr -  96803  96465  339  0  0  101  110   248 0.992  23.75
 2.01 Init - 100156 100117   40  1  1   73  109    69 0.987   5.92
 2.00 Prom - 104394 104355   40                              -2.56

 3.00 Prom + 108469 108508   40                              -3.36
 3.01 Init + 110082 110181  100  2  1   85   52    70 0.832   3.53
 3.02 Intr + 111804 112095  292  1  1   83   99   113 0.907   8.09
 3.03 Intr + 114375 114459   85  0  1   62   63   114 0.558   6.12
 3.04 Term + 117699 117752   54  2  0  114   34    23 0.348  -2.94
 3.05 PlyA + 117846 117851    6                               1.05

 4.05 PlyA - 117859 117854    6                               1.05
 4.04 Term - 120727 120607  121  0  1  110   43    76 0.813   3.25
 4.03 Intr - 121987 121879  109  2  1   72   98    48 0.784   3.54
 4.02 Intr - 125524 125072  453  2  0   76  110   448 0.512  39.03
 4.01 Init - 131575 131536   40  1  1   69  109    59 0.834   4.46
 4.00 Prom - 131725 131686   40                              -7.16

 5.00 Prom + 132016 132055   40                              -5.96
 5.01 Init + 133994 134127  134  1  2   78   67    42 0.431   0.71
 5.02 Intr + 134786 134909  124  2  1   42   53    66 0.397  -0.91
 5.03 Intr + 137132 137271  140  1  2   14   28   323 0.961  18.16
 5.04 Intr + 145768 145891  124  1  1   85   12    46 0.018  -2.71
 5.05 Term + 161531 161662  132  1  0   68   42   139 0.739   5.39
 5.06 PlyA + 163576 163581    6                               1.05

 6.00 Prom + 169315 169354   40                              -3.26
 6.01 Init + 178825 179176  352  0  1   66   27   181 0.263   7.12
 6.02 Intr + 179236 179612  377  2  2   29   92   321 0.704  21.33
 6.03 Intr + 191825 191891   67  1  1   69   98    58 0.062   3.38
 6.04 Term + 193633 193649   17  2  2  131   49     1 0.339  -1.10
 6.05 PlyA + 196575 196580    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  39304  39265   40  1  1   71  109    81 0.935   6.87
S.002 Init -  53736  53676   61  0  1   60  109   111 0.949   9.81


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815581f:74492047_74692775|GENSCAN_predicted_peptide_1|212_aa
QGELIALTQALTLAKGLRVNIYTDSKYAFHILHHHAVTWAERNFLTTQESSIINVSLIKP
LLKAALLSKEAGVIRCKGHQKASDPIAQGNSYADKCVDSILTIRCSVSKMLGKKHPEEHK
SEIQPLPGLLQGSRPMHEAQPESTCLREQTSKAYIGSFHLARKDEDSSEAMTTEQEGTCI
NQFQGHHQGQTNKPKAPNQQLTVKQERKQWLP

>gi568815581f:74492047_74692775|GENSCAN_predicted_CDS_1|639_bp
caaggcgaactcattgccttaactcaggccctcactcttgcaaagggactacgcgtcaat
atttatactgactctaaatatgccttccatatcctgcaccaccatgctgttacatgggca
gaaagaaatttcctcactacacaagagtcctccattattaatgtgtccttaataaaacct
cttcttaaagctgctttactttcaaaggaagctggagtcattcgctgcaagggccatcaa
aaggcatcagatcccattgctcagggcaactcttatgctgataagtgtgtggactccatc
ctcacaatcagatgctcagtgtccaaaatgctgggtaagaaacatcctgaagaacacaaa
tctgagatacagcctcttccaggcctgctccaaggctccagaccaatgcatgaagcacag
cctgagtccacgtgcctgagggaacagacctccaaagcctacattgggagcttccacctg
gcaaggaaggatgaagacagttctgaggccatgaccacagagcaagaaggaacttgtatc
aaccaattccaaggacaccaccaaggccaaacaaacaaaccaaaagccccaaatcagcaa
ttaacagtgaaacaagagaggaagcagtggctgccatga

>gi568815581f:74492047_74692775|GENSCAN_predicted_peptide_2|893_aa
MWLSPSLLLLILPGYSIAAKITGPTTVNGSEQGSLTVQCAYGSGWETYLKWRCQGADWNY
CNILVKTNGSEQEVKKNRVSIRDNQKNHVFTVTMENLKRDDADSYWCGTERPGIDLGVKV
QVTINPESNREHKEPQGQVLVHRKRVRARSASKAFKNMMSDLIPERSPLKSTHFLFLFLL
ELPLLLSMLGTVLWVSETEGQGPAGEGTAAPDAGLDMEKAWMSQMWVISSRNLSSPGGLQ
GPEYICFKADWAPQPGAQAMLTHRLRIDERETSFCGYSMLGLGVLLWQSSGNTGRAEDLT
LKVPLVQTLPGEDGETDLCFPGCLTVSGPSTVMGAVGESLSVQCRYEEKYKTFNKYWCRQ
PCLPIWHEMVETGGSEGVVRSDQVIITDHPGDLTFTVTLENLTADDAGKYRCGIATILQE
DGLSGFLPDPFFQVQVLVSSASSTENSVKTPASPTRPSQCQGSLFSSPYVLLLVLELPLL
LSMLGAVVWVNGPQRSSGSRQSWPEGYFPLSHPMTVAGPVGGSLSVQCRYEKEHRTLNKF
WCRPPQILRCDKIVETKGSAGKRNGRVSIRDSPANLSFTVTLENLTEEDAGTYWCGVDTP
WLRDFHDPIVEVEVSVFPAGTTTASSPQSSMGTSGPPTKLPVHTWPSVTRKDSPEPSPHP
GSLFSNVRFLLLVLLELPLLLSMLGAVLWVNRPQRSSRSRQNWPKGCFSIQGPESVRAPE
QGSLTVQCHYKQGWETYIKWWCRGVRWDTCKILIETRGSEQGEKSDRVSIKDNQKDRTFT
VTMEGLRRDDADVYWCGIERRGPDLGTQVKVIVDPEGAASTTASSPTNSNMAVFIGSHKR
NHYMLLVFVKVPILLILVTAILWLKGSQRVPEEPGEQPIYMNFSEPLTKDMAT

>gi568815581f:74492047_74692775|GENSCAN_predicted_CDS_2|2682_bp
atgtggctgtccccatctctgctgcttctcatcctcccaggttactccattgccgctaaa
atcactggtccaacaacagtgaatggctcggagcagggctcattgactgtgcagtgtgct
tatggctcaggctgggagacctacttgaagtggcggtgtcaaggagctgattggaattac
tgtaacatccttgttaaaacaaatggatcagagcaggaggtaaagaagaatcgagtttcc
atcagggacaatcagaaaaaccacgtgttcaccgtgaccatggagaatctcaaaagagat
gatgctgacagttattggtgtgggactgagagacctggaattgatcttggggtcaaagtt
caagtgaccattaacccagaaagtaacagggaacataaggaaccccagggccaggtgctg
gtccacaggaagagggtcagagcaaggtcagcctccaaggccttcaagaatatgatgtca
gatctgatacctgaaaggtccccgctcaagagcacccacttcctgttcctgttcctcctg
gagctgcctctgctcctgagcatgctggggaccgtcctctgggtttcagagacagaagga
caagggcctgctggggaagggacagcggctccagatgctggccttgacatggaaaaagcc
tggatgtcccagatgtgggtcatctcttcaaggaatttgtcatctcctgggggactccag
ggcccagagtacatctgcttcaaagcggactgggctccgcagcctggtgcccaagcaatg
ctgactcaccgcttgcgtatagacgagcgagaaacaagcttctgtggttacagcatgctg
ggattaggagttttgctatggcaatcctcaggcaacactgggcgtgcagaggacctgaca
ctcaaggttccactggtccagactcttccaggtgaagacggggaaacggacttgtgtttt
ccaggctgtctgactgtgagtggccccagcaccgtgatgggcgccgtgggggaatccctg
agtgttcagtgtcggtatgaagagaaatacaagacgtttaacaaatactggtgcagacaa
ccatgcttgccaatttggcatgaaatggtggagaccggagggtctgagggagtggtgagg
agtgaccaagtgatcatcacggaccatcctggagacctcaccttcaccgtgaccttggag
aacctcacggcagacgatgcaggaaaataccgatgtgggattgcaacaatactgcaggaa
gatggcctgtctggtttcctgcccgatcccttcttccaggttcaagtgctggtctcatcg
gcctccagtactgagaactctgtgaagacacctgcatctcccaccaggcccagccaatgc
caaggctccctgttcagcagcccctacgtcctgctcctggtcctggagctgcccctgctc
ctgagcatgctgggtgccgtcgtctgggtgaacggacctcagagaagctctggaagcagg
cagagttggccagagggctattttcctctgagccaccccatgaccgtggcgggccccgtg
gggggatccctgagtgtgcagtgtcgctatgagaaggaacacaggaccctcaacaaattc
tggtgcagaccaccacagattctccgatgtgacaagattgtggagaccaaagggtcagca
gggaaaaggaatggccgagtgtccatcagggacagtcctgcaaacctcagcttcacagtg
accctggagaatctcacagaggaggacgcaggcacctactggtgtggggtggatacaccg
tggctccgagactttcatgatcccattgtcgaggttgaggtgtccgtgttcccggccggg
acgaccacagcctccagcccccagagctccatgggcacctcaggtcctcccacgaagctg
cccgtgcacacctggcccagcgtgaccagaaaggacagccccgaacccagcccacaccct
ggctccctgttcagcaatgtccgcttcctgctcctggtcctcttggagctgcccctgctc
ctgagcatgctgggtgccgtcctctgggtgaacagacctcagagaagctctagaagcagg
cagaattggcccaagggctgtttctccatccaaggcccagagtctgtgagagccccagag
caggggtccctgacggttcaatgccactataagcaaggatgggagacctacattaagtgg
tggtgccgaggggtgcgctgggatacatgcaagatcctcattgaaaccagagggtcggag
caaggagagaagagtgaccgtgtgtccatcaaggacaatcagaaagaccgcacgttcact
gtgaccatggaggggctcaggcgagatgacgcagatgtttactggtgtgggattgaaaga
agaggacctgaccttgggactcaagtgaaagtgatcgttgacccagagggagcggcttcc
acaacagcaagctcacctaccaacagcaatatggcagtgttcatcggctcccacaagagg
aaccactacatgctcctggtatttgtgaaggtgcccatcttgctcatcttggtcactgcc
atcctctggttgaaggggtctcagagggtccctgaggagccaggggaacagcctatctac
atgaacttctccgaacctctgactaaagacatggccacttag

>gi568815581f:74492047_74692775|GENSCAN_predicted_peptide_3|176_aa
MKMLWRSDTDTYWCGIERTGTDLGVQVEVTIYPATPRKQSEPKTTDAAAPGTADTAGPGT
MDTAVPRKAETAVPGKRNTAVPGTADPASPGTADTAEPMRTTTPTVLASWPSLTQSTNST
QPTALTSPLTRILLCNIHFLLPISLKGLLLVGLLCTVLQSTVQNPDTNSNTPHRYC

>gi568815581f:74492047_74692775|GENSCAN_predicted_CDS_3|531_bp
atgaagatgctctggaggtccgacactgacacctactggtgtgggattgagaggacaggc
actgaccttggggtccaagttgaagtgaccatttacccagcaactccaagaaaacaatct
gaacctaagacaacagacgcagctgcacctgggacagcagacacagctgggcctgggaca
atggacacagctgtacctagaaaagcagaaacagctgtgcctgggaaaaggaacacagct
gtgcctggaacagcagacccagcttcacctgggacagcagacacagcagaacctatgaga
acaaccactccaacagttctggcctcctggccttctctcacccagagcaccaacagcacc
cagcccacggctcttaccagccccctcaccaggatcctgctctgcaacatccacttcctg
ctcccgatctccctgaaggggctgctgctcgtgggcctgctctgcactgtgctgcaaagc
actgtgcagaaccctgacacaaattctaacacaccgcatcgctattgttag

>gi568815581f:74492047_74692775|GENSCAN_predicted_peptide_4|240_aa
MWLLPALLLLCLSGNTQVSLAIFPLSFRQTAADGAIWMETWDSGLCFPGCLSLKGPGSVT
GTAGDSLTVWCQYESMYKGYNKYWCRGQYDTSCESIVETKGEEKVERNGRVSIRDHPEAL
AFTVTMQNLNEDDAGSYWCKIQTVWVLDSWSRDPSDLVRVYVSPAITTPRRTTHPATPPI
FLVVNPGRNLSTGEVLTQNSGFRLSSPHFLLVVLLKLPLLLSMLGAVFWVNRPQWAPPGR

>gi568815581f:74492047_74692775|GENSCAN_predicted_CDS_4|723_bp
atgtggctgctcccagctctactccttctctgcctctcaggaaacacccaggtctccctg
gcaatcttccccttaagcttcagacagacggctgctgatggggccatctggatggagact
tgggactcgggcttgtgttttccaggctgtttgtctctgaagggccccggctctgtgact
ggcactgcgggggactctctgacagtgtggtgtcagtatgagagcatgtacaagggatat
aacaagtactggtgccgaggacagtacgacacgtcatgtgagagcattgtggagaccaag
ggagaagagaaggtggagaggaatggccgcgtgtccatcagagaccacccggaggctctc
gccttcactgtgaccatgcagaacctcaatgaagatgatgctggatcttactggtgcaaa
attcagacagtgtgggtcctggattcatggtcacgcgatccctcggacctggttagggtg
tatgtttccccagcaattacaaccccaaggaggaccacacatccagccacacctcccatc
ttcctggtggtgaaccctgggcgaaacctcagcaccggggaggtgttgacccaaaattca
gggttccggctcagcagccctcacttcctgctcgtggtccttctgaagctgcccctgctc
ctgagcatgctgggtgctgtcttctgggtgaacaggcctcagtgggctcctcctggaaga
tag

>gi568815581f:74492047_74692775|GENSCAN_predicted_peptide_5|217_aa
MSNIGTFHYNPIRKSKLRPPSKTELTQKLSSGSKLKSNPIKGNSSFHATTAEFVTGPTSS
YAHCTGTNQYTKTTGFAAEKEFNDHRHERQSETLLKKKEKERKRKRKKKKKKKKKKKKKK
KRRKKKDEEKKKCYQGSVTRSGAPDTVITEDLLFLAGSKNDETSVVQTEGCNLVMKCIYM
HLYNKWNLWQNSDDVDDDDDEDKDKDEGNSRHLHITV

>gi568815581f:74492047_74692775|GENSCAN_predicted_CDS_5|654_bp
atgtctaatataggcacatttcattataatccaattagaaaatccaaactccgaccacct
agtaagaccgagttgacacagaagctatcatctggttccaaactgaagtcaaatccaata
aaaggaaattccagctttcatgctacaacagcagagtttgttacaggaccaacgagttca
tatgcccattgcactggaacaaaccaatacaccaagacaacagggtttgcagcagagaaa
gagtttaatgatcacaggcatgagcgacagagtgagactctgttgaagaagaaggagaag
gagaggaagaggaagaggaagaagaagaagaagaagaagaagaagaagaagaagaagaag
aagaggaggaagaagaaggacgaggagaagaagaagtgctaccaggggagcgtgacccgt
tctggggctccagacactgttatcacagaagatttgctctttctggcaggaagcaaaaac
gatgagactagtgttgtccaaactgagggttgcaacctggttatgaagtgcatttacatg
cacttgtataataagtggaatttatggcagaatagtgacgatgttgatgatgatgatgac
gaagacaaagacaaagatgaaggcaacagtcgacacctacatatcactgtctaa

>gi568815581f:74492047_74692775|GENSCAN_predicted_peptide_6|270_aa
MCAGENVIKALDLLPRKTQVNRILHISGTLGTPKTHLLSTSDLEALFISYILERIVQGQK
QKRRQRRRTSPLQTCEESCAALSCVVTEMPVRSGSGTVSSWDRNALRTQPGAEPPESASW
SPKRQGLERTGSQNSGPGRTTAESLFLVLKRSVLEERGRLPAWYRAAAAAGNCPVLKTDA
ARPAELRPKPAAPSGARTELLEALTQSAGRAGAASSKPGMDLQRPDSYQGGAGPDFNDHV
LHKDSICEGHGQQEVWPGRQIRQSEDSQGP

>gi568815581f:74492047_74692775|GENSCAN_predicted_CDS_6|813_bp
atgtgtgctggagagaatgtgatcaaagccctggaccttctccctaggaaaacgcaggta
aacagaattttgcatatttcagggactttggggacacctaagacccatctactgtcgacc
tcagacttagaagctctatttatctcatacatcctggagagaattgtccagggacaaaaa
cagaagcgccgccagcgccgcaggacttcgcctctgcaaacgtgtgaggagagctgcgct
gcgctgagctgcgtggtgacggagatgcccgttcgctcgggatcaggaacggtgagctcc
tgggaccgcaatgccctgagaacgcagccgggtgctgagcctccggagtccgcatcctgg
agtcctaagaggcagggattggagcggacaggatctcagaactctggtcccgggcgcaca
acggcggagtcgctgttcctggtgctgaaacgctcagtcctggaagaacgtggccgcctg
cccgcctggtaccgcgccgcggccgctgcggggaactgtccagtgctgaaaacggatgcg
gcccggcccgcagagctcagacccaagcctgccgcacccagcggagctcgaaccgagctc
ctggaagcgctgacgcagagcgcagggagagccggagcggcgagctccaagcctggcatg
gacctgcagagacccgattcctaccagggaggagctggccctgacttcaacgaccacgtc
ctgcataaggacagcatctgcgagggtcacgggcagcaggaagtgtggcctggaaggcag
atcagacagtccgaagattcccaaggtccttag