GENSCAN 1.0	Date run:  4-Nov-116	Time: 07:23:19

Sequence gi568815583r:98339634_98580780 : 241147 bp : 44.53% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.27 PlyA -    836    831    6                               1.05
 1.26 Term -  20041  19973   69  1  0  106   36    68 0.272   1.34
 1.25 Intr -  24668  24581   88  1  1   76   92    70 0.396   6.17
 1.24 Intr -  30125  29988  138  1  0   62   59    80 0.325   2.08
 1.23 Intr -  34042  33996   47  1  2   74  105    23 0.184  -0.19
 1.22 Intr -  35832  35743   90  0  0   64  116    12 0.201   1.79
 1.21 Intr -  55400  55296  105  2  0   28   91    63 0.068   1.01
 1.20 Intr -  60298  60234   65  2  2  150   94   -12 0.061   4.04
 1.19 Intr -  64521  64344  178  0  1   73   38    95 0.030   2.49
 1.18 Intr -  83108  82846  263  0  2   74  110    50 0.084   3.01
 1.17 Intr -  87899  87769  131  1  2   67   94    46 0.281   3.44
 1.16 Intr -  89146  88857  290  1  2   43   46   143 0.539   1.64
 1.15 Intr -  91244  91105  140  0  2   63   94    80 0.434   6.28
 1.14 Intr -  94010  93925   86  1  2   90   65    38 0.189   1.16
 1.13 Intr - 100117 100011  107  1  2   75   37   124 0.267   5.01
 1.12 Intr - 101534 101438   97  1  1    5   86    54 0.108  -3.09
 1.11 Intr - 102322 102156  167  1  2   61  105    58 0.166   3.56
 1.10 Intr - 106495 106395  101  2  2  116   26    62 0.224   2.63
 1.09 Intr - 109517 109310  208  2  1   16   35   172 0.306   3.35
 1.08 Intr - 110749 110615  135  1  0   88    2    85 0.255   0.66
 1.07 Intr - 111178 111098   81  1  0  127   61     5 0.329   1.53
 1.06 Intr - 112377 112229  149  1  2  129   20   185 0.452  15.75
 1.05 Intr - 118997 118959   39  0  0  121   93    -1 0.006   1.90
 1.04 Intr - 135739 135719   21  2  0   78  107    18 0.168   0.22
 1.03 Intr - 141144 140967  178  0  1   88  100    45 0.912   5.19
 1.02 Intr - 146344 146259   86  2  2   84  113    43 0.968   5.94
 1.01 Init - 147501 147399  103  0  1   74   74    63 0.715   3.90
 1.00 Prom - 149191 149152   40                              -4.16

 2.00 Prom + 158708 158747   40                              -5.26
 2.01 Init + 161663 161746   84  1  0   86   66    38 0.217   2.30
 2.02 Intr + 165562 165694  133  0  1   41   48   105 0.213   2.02
 2.03 Term + 182323 182483  161  2  2   92   49    92 0.811   3.80
 2.04 PlyA + 182643 182648    6                               1.05

 3.00 Prom + 187594 187633   40                              -4.36
 3.01 Init + 189007 189054   48  0  0   90  116   -11 0.608   2.85
 3.02 Intr + 197930 198053  124  1  1  102   66    73 0.370   6.66
 3.03 Intr + 210425 210550  126  0  0   65   44   108 0.017   4.75
 3.04 Term + 221866 222080  215  2  2   73   41   118 0.556   2.99
 3.05 PlyA + 223097 223102    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815583r:98339634_98580780|GENSCAN_predicted_peptide_1|1053_aa
MSRSPLLSSGTHVYTWNGSGDASEAESAGLGDAWVVAVYIKESWCSTEDALRTSDPAREG
LMKVQSFGERVVLFILNAIIFGRLERNLDDDDMFFLPHSVKEQAKILWRRGAAVGFYTTK
MKGGINPVAGKSGISSLFGSVAGRLCGDGTGACYLLPVFDTVFIRRKHWHRGLGTAMLRD
FCETFPEDEALGVQEHSGAQAAGPLSTPMSFQALSSLFQGGKDSTGPRGGTHLAHAAPSN
LAQGARTPEFLPVATVGLSGPHPMAEGFEEAAEEKFEASRGWLMKFKERRCLHNIKVQDE
AAGADTEATASYLEDLAQIIDKGGYTTQQIFNVVCRQFLLVCLEERGRLWEVERRGAWGQ
CTNIWLKGSEHHTHTYGFGGVGCGGAKEDKKVIPFQVGTDLVGEEGDSLNVGDYDLSCEQ
NHRAAHPGNSEDVSRHARTSQNDRPRQPAPGDGSKERMCGEELEDTKDDPECGVEEEDAG
LAGQPPGKLTRAQNITMAKQEGLELGILPSSNHSNAVTGGSLDTWCVVLLVSADASTPNP
CPNQEVTLWPASSRSQPASSLSLATWASSSFRGKNTACRSQGSGHGPGGALEKTETRVAA
VSPILAGGRKRRSQDRLAESADSRKKKRRGRLLAARPLSEGNTHGGHTMAALPKPKPAGR
APSFFDVLFGFFSAAAAAAAKILWGQCASFIKWGQCLSGRIRWEDEECKPPECKHLALTD
CLDAALGTNSLCRPGAGSDFNSWWIWAARAQRVGESSTFSSIVPPFPCPQSASLAFPEKS
HTEALELCHCRWSRGCDEAPRAKCCGIGSKTYSPESAWVRGPWGPHGTDLKDLQGWKPGK
QKSFIIAQKFKATGFKFWLLPPSRLELGGEKQGKESSLKIGAANIDKKIWKLARVNAGNC
ANRKGLPGGQGWGDDAPYSHPPRPIDLYEFTISFLFAEDKPHSFTLAGPVNSSSSWPSCS
SKDIPVLSALEPGTLGLHFMLHMDPEQHQRRLNLLVSWSKLLEFWEYVSLHAHLRGPLPL
WSNSTTKASEAPIQHEDGEDKGPYDDPLPLNST

>gi568815583r:98339634_98580780|GENSCAN_predicted_CDS_1|3162_bp
atgtccaggtctcccctgctgagcagcgggacccatgtctacacttggaatggttctggg
gatgcttctgaggcagagtcagcagggcttggagatgcctgggttgtggctgtttacata
aaggaatcctggtgctccacggaagatgcactaagaacctctgatcctgcaagagaaggg
ttgatgaaggttcagtcgtttggggaaagggttgtgcttttcattctaaacgccattatt
tttggaagattggagagaaatttggatgatgatgacatgttttttctacctcactctgtg
aaggaacaagctaaaatcctgtggagacgtggagcggctgttgggttttacacaaccaag
atgaaaggtggaattaatcctgtggctggtaaatcaggtatttcttctttgtttgggtcc
gttgctggcagactgtgtggtgatggcaccggtgcatgctacctgctgcctgtctttgac
accgtgttcatcaggaggaaacactggcaccgaggcttgggaacagccatgctgcgggac
ttctgtgagacattcccagaggacgaggccctgggggtgcaggagcattcaggggcccag
gcagctggtcctctgtccacacccatgtccttccaggccctctcctctttgtttcagggg
ggcaaggactccacgggcccaagaggaggtacccacctggctcatgctgctccttctaat
ctggctcagggtgccaggaccccagaattcctgccagtggccactgtgggcctgagtgga
cctcatcccatggctgagggatttgaggaagctgcagaagaaaagtttgaagctagcaga
ggttggctcatgaagtttaaggaaagacgctgtctccataacataaaagtgcaggatgaa
gcagcaggtgctgatacagaagctacagcaagttatctggaagatctagctcagatcatt
gataaaggtggctacactacacaacagattttcaatgtagtctgcaggcagttcctgctg
gtctgtctggaggagcgaggacgcctgtgggaggtggagcgccggggggcctggggccag
tgcaccaatatctggctaaagggatctgaacaccacacacacacatatggatttgggggc
gtggggtgtggaggtgcaaaggaggacaagaaagtcatccctttccaagtcggtactgat
ttggtaggagaggagggagactcactgaacgtgggtgattatgacctctcttgtgagcaa
aaccaccgggcagcacacccaggaaattccgaggacgtgagccgtcatgcgaggacttct
cagaatgacagacccagacagcctgcccctggagacggcagcaaggagaggatgtgtgga
gaagaactggaagacacaaaggatgatccagagtgtggagtggaagaggaggatgccggg
ctggcagggcagccaccaggcaagcttacaagggcacaaaacatcaccatggcaaagcaa
gagggattggagctgggtattctaccgagctcaaaccacagcaatgcagtcacgggaggc
tccctggacacctggtgtgtggtcctgctggtgtctgcggatgcttctaccccaaacccc
tgtcctaaccaggaagtgacgttgtggccggcaagttctcgctctcaacctgcatcgtct
ctgtccctggccacatgggcaagttcttcctttagaggaaaaaacaccgcctgccgcagt
caaggctcggggcacggcccaggaggtgccctggagaagactgagacccgggttgcagca
gtgagccccattctggctggtgggagaaaacggcgatctcaggacagacttgcggagagc
gcggactcccgtaaaaagaagaggcgcgggcgcctgctcgctgcccggccgctttccgag
ggaaatacccacggcggccacacgatggcagccttgcccaaaccaaagcccgccgggcgc
gctccgagtttttttgatgtgttatttggcttcttttcagcagcagcagcagcagcagcc
aaaatactctggggccagtgtgcttcgtttataaaatggggacagtgtctctctggaagg
attcgctgggaagatgaagaatgtaagcctccagagtgtaagcatcttgccctcactgac
tgtctggatgctgccttggggaccaacagcctttgcaggcctggggctgggtccgacttc
aactcctggtggatctgggctgccagagctcagcgggtgggagagagctccacgttcagc
tccatcgtaccccctttcccatgcccccaaagcgcctctctggcttttcctgaaaagtcc
cacactgaggctctggaactctgccattgtaggtggagcaggggatgcgatgaggcccca
agggctaaatgttgtggcattggaagcaaaacctacagcccagagtcagcttgggtgaga
ggcccatggggccctcacggcaccgacctcaaagacctacagggatggaagcccggcaaa
cagaaatccttcataattgcccagaagttcaaagctactggtttcaagttctggcttctg
cctccctcaaggctagagcttgggggagagaaacagggaaaagagagcagcctaaaaatt
ggagctgcaaacatagataagaaaatctggaagcttgcacgggtgaatgctggcaactgt
gccaatagaaaagggctacctgggggccagggttggggggatgatgcaccttattcccac
cccccccgaccaattgatttgtatgagtttactattagttttctttttgcagaggataag
ccacactccttcaccctagcaggtccagtcaattccagtagcagctggccaagctgttct
tccaaggacatcccagtgttgtccgccctggagccaggcacactggggctgcatttcatg
ctgcacatggacccagagcagcaccagagaaggctcaacttgctagtcagttggtcaaag
cttttggaattctgggaatatgtcagcttgcatgcacatctccgaggccctcttcctctt
tggagtaattcaacgaccaaggccagcgaggcacctattcaacatgaagatggcgaggat
aaaggcccttatgatgatcctcttccacttaatagtacataa

>gi568815583r:98339634_98580780|GENSCAN_predicted_peptide_2|125_aa
MAALGSQGTIFPGSRVLLKLQPKEVELVVVPEAGSGKSPLCILRVHESAGPSHFKARKIA
ITAPHAKTQTSLDKPGRKHLLGAPCGTAASPACFGSTIPPANHYSGIKDCNKWQKVSSLQ
STKFA

>gi568815583r:98339634_98580780|GENSCAN_predicted_CDS_2|378_bp
atggctgctctgggcagccaaggtactattttcccaggaagcagggtactgctcaagctc
cagcccaaggaggtagagctggtggtggtccctgaagcaggctccgggaaatctccactc
tgcatccttcgtgttcatgagtctgcggggccatcacacttcaaagccagaaaaattgca
atcaccgctccacacgccaaaacccagacttcactagataagcctggacgtaaacaccta
cttggtgccccttgtggaacagcagcttcccctgcttgtttcggaagcaccattccccct
gccaatcactattctggaatcaaagactgcaataagtggcaaaaagtgtcaagtcttcag
tccaccaagtttgcctag

>gi568815583r:98339634_98580780|GENSCAN_predicted_peptide_3|170_aa
MVTAAHPSTQRRREQKMGRTTCERSTGRTLNVPAIQKTKSASDDYDVFTDADQQVSIAPR
PIDHPTAEEYGHTAQDWQAAPPAASVQDPLGKASWAPESVRAPCVYIEPTRMTPESLPEF
PLPGKVWYIHRDRGFGMDIFEGATILPTTSSKKPTDDSEAAAGAVEGRFT

>gi568815583r:98339634_98580780|GENSCAN_predicted_CDS_3|513_bp
atggtgacagcagcacatccctctacccagaggaggagagaacagaagatgggcaggact
acctgtgagcgcagcactgggagaactttgaatgtcccagccattcagaaaactaaaagt
gcaagtgatgattatgatgtcttcacagatgcagaccaacaggtctccatagcgcccagg
cccatcgaccacccaacggctgaggagtacgggcacactgcacaggactggcaggcagct
ccacctgcggcctccgtgcaggatccactgggtaaagccagctgggctcctgagtctgtt
agggccccttgtgtttacattgagcccaccaggatgaccccagagagtctccctgaattt
cctttgccaggtaaggtgtggtatatccatagggaccggggattcggaatggacatcttt
gaaggagccacaattctgcctaccacatcttcaaagaagcctacagatgactctgaagct
gcagccggcgcagttgagggacgtttcacctga