FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB7394, 204 aa 1>>>pF1KB7394 204 - 204 aa - 204 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 8.0993+/-0.000729; mu= 3.5480+/- 0.044 mean_var=191.2465+/-39.386, 0's: 0 Z-trim(117.2): 59 B-trim: 1040 in 1/52 Lambda= 0.092742 statistics sampled from 17847 (17909) to 17847 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.839), E-opt: 0.2 (0.55), width: 16 Scan time: 2.140 The best scores are: opt bits E(32554) CCDS4894.2 CRIP3 gene_id:401262|Hs108|chr6 ( 204) 1564 220.1 7.7e-58 CCDS10003.1 CRIP2 gene_id:1397|Hs108|chr14 ( 208) 985 142.6 1.6e-34 CCDS59246.1 CRIP2 gene_id:1397|Hs108|chr14 ( 282) 929 135.2 3.7e-32 >>CCDS4894.2 CRIP3 gene_id:401262|Hs108|chr6 (204 aa) initn: 1564 init1: 1564 opt: 1564 Z-score: 1151.9 bits: 220.1 E(32554): 7.7e-58 Smith-Waterman score: 1564; 100.0% identity (100.0% similar) in 204 aa overlap (1-204:1-204) 10 20 30 40 50 60 pF1KB7 MSWTCPRCQQPVFFAEKVSSLGKNWHRFCLKCERCHSILSPGGHAEHNGRPYCHKPCYGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS48 MSWTCPRCQQPVFFAEKVSSLGKNWHRFCLKCERCHSILSPGGHAEHNGRPYCHKPCYGA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB7 LFGPRGVNIGGVGSYLYNPPTPSPGCTTPLSPSSFSPPRPRTGLPQGKKSPPHMKTFTGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS48 LFGPRGVNIGGVGSYLYNPPTPSPGCTTPLSPSSFSPPRPRTGLPQGKKSPPHMKTFTGE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB7 TSLCPGCGEPVYFAEKVMSLGRNWHRPCLRCQRCHKTLTAGSHAEHDGVPYCHVPCYGYL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS48 TSLCPGCGEPVYFAEKVMSLGRNWHRPCLRCQRCHKTLTAGSHAEHDGVPYCHVPCYGYL 130 140 150 160 170 180 190 200 pF1KB7 FGPKGVNIGDVGCYIYDPVKIKFK :::::::::::::::::::::::: CCDS48 FGPKGVNIGDVGCYIYDPVKIKFK 190 200 >>CCDS10003.1 CRIP2 gene_id:1397|Hs108|chr14 (208 aa) initn: 959 init1: 480 opt: 985 Z-score: 733.1 bits: 142.6 E(32554): 1.6e-34 Smith-Waterman score: 985; 63.3% identity (80.9% similar) in 199 aa overlap (1-197:1-199) 10 20 30 40 50 60 pF1KB7 MSWTCPRCQQPVFFAEKVSSLGKNWHRFCLKCERCHSILSPGGHAEHNGRPYCHKPCYGA :. ::.:.. :.::::::::::.::.:::::::: . :.:::::::.:.:.::::::.. CCDS10 MASKCPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHKPCYAT 10 20 30 40 50 60 70 80 90 100 110 pF1KB7 LFGPRGVNIGGVGSYLYNPP-TPSPGCTTPLS-PSSFSPPRPRTGLPQGKKSPPHMKTFT ::::.::::::.:::.:. : . .: : :. :.. . : .: :.: . . ::: CCDS10 LFGPKGVNIGGAGSYIYEKPLAEGPQVTGPIEVPAARAEERKASGPPKGPSRASSVTTFT 70 80 90 100 110 120 120 130 140 150 160 170 pF1KB7 GETSLCPGCGEPVYFAEKVMSLGRNWHRPCLRCQRCHKTLTAGSHAEHDGVPYCHVPCYG :: . :: :.. ::::::: :::..::::::::.:: :::: :.:::::: :::: :::: CCDS10 GEPNTCPRCSKKVYFAEKVTSLGKDWHRPCLRCERCGKTLTPGGHAEHDGQPYCHKPCYG 130 140 150 160 170 180 180 190 200 pF1KB7 YLFGPKGVNIGDVGCYIYDPVKIKFK :::::::: : :: :::: CCDS10 ILFGPKGVNTGAVGSYIYDRDPEGKVQP 190 200 >>CCDS59246.1 CRIP2 gene_id:1397|Hs108|chr14 (282 aa) initn: 882 init1: 480 opt: 929 Z-score: 690.8 bits: 135.2 E(32554): 3.7e-32 Smith-Waterman score: 929; 62.6% identity (78.3% similar) in 198 aa overlap (2-197:77-273) 10 20 30 pF1KB7 MSWTCPRCQQPVFFAEKVSSLGKNWHRFCLK : :: .: :::::::::.::.:::: CCDS59 GCVCKGGGCCHREPSQDHHESQEHRGPLVGSQTC-LVHQAEGTAEKVSSLGKDWHKFCLK 50 60 70 80 90 100 40 50 60 70 80 90 pF1KB7 CERCHSILSPGGHAEHNGRPYCHKPCYGALFGPRGVNIGGVGSYLYNPP-TPSPGCTTPL :::: . :.:::::::.:.:.::::::..::::.::::::.:::.:. : . .: : :. CCDS59 CERCSKTLTPGGHAEHDGKPFCHKPCYATLFGPKGVNIGGAGSYIYEKPLAEGPQVTGPI 110 120 130 140 150 160 100 110 120 130 140 pF1KB7 S-PSSFSPPRPRTGLPQGKKSPPHMKTFTGETSLCPGCGEPVYFAEKVMSLGRNWHRPCL :.. . : .: :.: . . ::::: . :: :.. ::::::: :::..:::::: CCDS59 EVPAARAEERKASGPPKGPSRASSVTTFTGEPNTCPRCSKKVYFAEKVTSLGKDWHRPCL 170 180 190 200 210 220 150 160 170 180 190 200 pF1KB7 RCQRCHKTLTAGSHAEHDGVPYCHVPCYGYLFGPKGVNIGDVGCYIYDPVKIKFK ::.:: :::: :.:::::: :::: :::: :::::::: : :: :::: CCDS59 RCERCGKTLTPGGHAEHDGQPYCHKPCYGILFGPKGVNTGAVGSYIYDRDPEGKVQP 230 240 250 260 270 280 204 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Fri Nov 4 07:21:48 2016 done: Fri Nov 4 07:21:48 2016 Total Scan time: 2.140 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]