Result of FASTA (omim) for
pF1KB7379
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7379, 180 aa
1>>>pF1KB7379 180 - 180 aa - 180 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.0814+/-0.000428; mu= -2.9665+/- 0.027
mean_var=253.1284+/-52.510, 0's: 0 Z-trim(118.6): 36 B-trim: 396 in 1/56
Lambda= 0.080613
statistics sampled from 31761 (31797) to 31761 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.69), E-opt: 0.2 (0.373), width: 16
Scan time: 5.620
The best scores are: opt bits E(85289)
NP_001009615 (OMIM: 300665) sperm protein associat ( 180) 1163 147.4 1.2e-35
NP_001009609 (OMIM: 300666) sperm protein associat ( 141) 690 92.3 3.7e-19
XP_016884753 (OMIM: 300666) PREDICTED: sperm prote ( 140) 530 73.6 1.5e-13
NP_001009614 (OMIM: 300664) sperm protein associat ( 72) 335 50.7 6e-07
NP_001009616 (OMIM: 300668) sperm protein associat ( 72) 312 48.0 3.8e-06
XP_016885032 (OMIM: 300667) PREDICTED: sperm prote ( 157) 299 46.8 1.9e-05
NP_001009613 (OMIM: 300667) sperm protein associat ( 99) 292 45.8 2.4e-05
XP_016885033 (OMIM: 300667) PREDICTED: sperm prote ( 156) 289 45.7 4.3e-05
>>NP_001009615 (OMIM: 300665) sperm protein associated w (180 aa)
initn: 1163 init1: 1163 opt: 1163 Z-score: 760.9 bits: 147.4 E(85289): 1.2e-35
Smith-Waterman score: 1163; 100.0% identity (100.0% similar) in 180 aa overlap (1-180:1-180)
10 20 30 40 50 60
pF1KB7 MEQPTSSTNGEKRKSPCESNNKKNDEMQEAPNRVLAPKQSLQKTKTIEYLTIIVYYYRKH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MEQPTSSTNGEKRKSPCESNNKKNDEMQEAPNRVLAPKQSLQKTKTIEYLTIIVYYYRKH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 TKINSNQLEKDQSRENSINPVQEEEDEGLDSAEGSSQEDEDLDSSEGSSQEDEDLDSSEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TKINSNQLEKDQSRENSINPVQEEEDEGLDSAEGSSQEDEDLDSSEGSSQEDEDLDSSEG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 SSQEDEDLDSSEGSSQEDEDLDSSEGSSQEDEDLDPPEGSSQEDEDLDSSEGSSQEGGED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSQEDEDLDSSEGSSQEDEDLDSSEGSSQEDEDLDPPEGSSQEDEDLDSSEGSSQEGGED
130 140 150 160 170 180
>>NP_001009609 (OMIM: 300666) sperm protein associated w (141 aa)
initn: 922 init1: 688 opt: 690 Z-score: 465.0 bits: 92.3 E(85289): 3.7e-19
Smith-Waterman score: 690; 77.3% identity (89.4% similar) in 141 aa overlap (1-140:1-141)
10 20 30 40 50 60
pF1KB7 MEQPTSSTNGEKRKSPCESNNKKNDEMQEAPNRVLAPKQSLQKTKTIEYLTIIVYYYRKH
:::::::::::: ::::::::::::::::.:::::::.:::..::: :: :.::: ::
NP_001 MEQPTSSTNGEKTKSPCESNNKKNDEMQEVPNRVLAPEQSLKNTKTSEYPIIFVYYLRKG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 TKINSNQLEKDQSRENSINPVQEEEDEGLDSAEGSSQEDEDLDSSEGSSQEDEDLDSSEG
::::::::..::.::::::.:.:::::.: .::::.::::: :: :.::.:::::::
NP_001 KKINSNQLENEQSQENSINPIQKEEDEGVDLSEGSSNEDEDLGPCEGPSKEDKDLDSSEG
70 80 90 100 110 120
130 140 150 160 170
pF1KB7 SSQEDEDLDSSEGSSQED-EDLDSSEGSSQEDEDLDPPEGSSQEDEDLDSSEGSSQEGGE
:::::::: ::::::.. ::
NP_001 SSQEDEDLGLSEGSSQDSGED
130 140
>>XP_016884753 (OMIM: 300666) PREDICTED: sperm protein a (140 aa)
initn: 981 init1: 520 opt: 530 Z-score: 364.5 bits: 73.6 E(85289): 1.5e-13
Smith-Waterman score: 530; 70.8% identity (87.5% similar) in 120 aa overlap (22-140:21-140)
10 20 30 40 50 60
pF1KB7 MEQPTSSTNGEKRKSPCESNNKKNDEMQEAPNRVLAPKQSLQKTKTIEYLTIIVYYYRKH
:.. .:::.:::::::.:::..::: :: :.::: ::
XP_016 MVSMCCWVAAWTGEFSLREIKRDMKMQEVPNRVLAPEQSLKNTKTSEYPIIFVYYLRKG
10 20 30 40 50
70 80 90 100 110 120
pF1KB7 TKINSNQLEKDQSRENSINPVQEEEDEGLDSAEGSSQEDEDLDSSEGSSQEDEDLDSSEG
::::::::..::.::::::.:.:::::.: .::::.::::: :: :.::.:::::::
XP_016 KKINSNQLENEQSQENSINPIQKEEDEGVDLSEGSSNEDEDLGPCEGPSKEDKDLDSSEG
60 70 80 90 100 110
130 140 150 160 170
pF1KB7 SSQEDEDLDSSEGSSQED-EDLDSSEGSSQEDEDLDPPEGSSQEDEDLDSSEGSSQEGGE
:::::::: ::::::.. ::
XP_016 SSQEDEDLGLSEGSSQDSGED
120 130 140
>>NP_001009614 (OMIM: 300664) sperm protein associated w (72 aa)
initn: 218 init1: 218 opt: 335 Z-score: 245.7 bits: 50.7 E(85289): 6e-07
Smith-Waterman score: 335; 72.6% identity (86.3% similar) in 73 aa overlap (1-73:1-72)
10 20 30 40 50 60
pF1KB7 MEQPTSSTNGEKRKSPCESNNKKNDEMQEAPNRVLAPKQSLQKTKTIEYLTIIVYYYRKH
::::::: :::::::::::::. ::::::.::: :::. ::.: :: :: :.... :::
NP_001 MEQPTSSINGEKRKSPCESNNE-NDEMQETPNRDLAPEPSLKKMKTSEYSTVLAFCYRKA
10 20 30 40 50
70 80 90 100 110 120
pF1KB7 TKINSNQLEKDQSRENSINPVQEEEDEGLDSAEGSSQEDEDLDSSEGSSQEDEDLDSSEG
::.:::::.:::
NP_001 KKIHSNQLENDQS
60 70
>>NP_001009616 (OMIM: 300668) sperm protein associated w (72 aa)
initn: 204 init1: 204 opt: 312 Z-score: 231.2 bits: 48.0 E(85289): 3.8e-06
Smith-Waterman score: 312; 69.9% identity (84.9% similar) in 73 aa overlap (1-73:1-72)
10 20 30 40 50 60
pF1KB7 MEQPTSSTNGEKRKSPCESNNKKNDEMQEAPNRVLAPKQSLQKTKTIEYLTIIVYYYRKH
::.::::::::::::::.::.: ::::::.::: :. . ::.: :: :: :..: :::
NP_001 MEKPTSSTNGEKRKSPCDSNSK-NDEMQETPNRDLVLEPSLKKMKTSEYSTVLVLCYRKT
10 20 30 40 50
70 80 90 100 110 120
pF1KB7 TKINSNQLEKDQSRENSINPVQEEEDEGLDSAEGSSQEDEDLDSSEGSSQEDEDLDSSEG
::.:::::.:::
NP_001 KKIHSNQLENDQS
60 70
>>XP_016885032 (OMIM: 300667) PREDICTED: sperm protein a (157 aa)
initn: 445 init1: 185 opt: 299 Z-score: 218.6 bits: 46.8 E(85289): 1.9e-05
Smith-Waterman score: 299; 49.5% identity (76.2% similar) in 101 aa overlap (1-101:1-98)
10 20 30 40 50 60
pF1KB7 MEQPTSSTNGEKRKSPCESNNKKNDEMQEAPNRVLAPKQSLQKTKTIEYLTIIVYYYRKH
::.:::::: .: :::::::..: :. .. .:. ::.:::..:. .: :. :.: ::.
XP_016 MEEPTSSTNENKMKSPCESNKRKVDKKKKNLHRASAPEQSLKETEKAKYPTL-VFYCRKN
10 20 30 40 50
70 80 90 100 110 120
pF1KB7 TKINSNQLEKDQSRENSINPVQEEEDEGLDSAEGSSQEDEDLDSSEGSSQEDEDLDSSEG
: ::::::..: :.: .:..:. : :: . :: :. :.
XP_016 KKRNSNQLENNQPTESSTDPIKEKGD--LDISAGSPQDGEEEKDLVFLGARACLEEHIRR
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB7 SSQEDEDLDSSEGSSQEDEDLDSSEGSSQEDEDLDPPEGSSQEDEDLDSSEGSSQEGGED
XP_016 SVLYVGDSDTLSKMKTSESPPSGHIPQSGVFCNSPNAVSN
120 130 140 150
>>NP_001009613 (OMIM: 300667) sperm protein associated w (99 aa)
initn: 458 init1: 185 opt: 292 Z-score: 216.9 bits: 45.8 E(85289): 2.4e-05
Smith-Waterman score: 292; 50.0% identity (76.5% similar) in 98 aa overlap (1-98:1-95)
10 20 30 40 50 60
pF1KB7 MEQPTSSTNGEKRKSPCESNNKKNDEMQEAPNRVLAPKQSLQKTKTIEYLTIIVYYYRKH
::.:::::: .: :::::::..: :. .. .:. ::.:::..:. .: :. :.: ::.
NP_001 MEEPTSSTNENKMKSPCESNKRKVDKKKKNLHRASAPEQSLKETEKAKYPTL-VFYCRKN
10 20 30 40 50
70 80 90 100 110 120
pF1KB7 TKINSNQLEKDQSRENSINPVQEEEDEGLDSAEGSSQEDEDLDSSEGSSQEDEDLDSSEG
: ::::::..: :.: .:..:. : :: . :: :.
NP_001 KKRNSNQLENNQPTESSTDPIKEKGD--LDISAGSPQDGGQN
60 70 80 90
130 140 150 160 170 180
pF1KB7 SSQEDEDLDSSEGSSQEDEDLDSSEGSSQEDEDLDPPEGSSQEDEDLDSSEGSSQEGGED
>>XP_016885033 (OMIM: 300667) PREDICTED: sperm protein a (156 aa)
initn: 344 init1: 120 opt: 289 Z-score: 212.4 bits: 45.7 E(85289): 4.3e-05
Smith-Waterman score: 289; 49.5% identity (76.2% similar) in 101 aa overlap (1-101:1-97)
10 20 30 40 50 60
pF1KB7 MEQPTSSTNGEKRKSPCESNNKKNDEMQEAPNRVLAPKQSLQKTKTIEYLTIIVYYYRKH
::.:::::: .: :::::::..: :. .. .:. ::.:::..:. .: :. :.: ::.
XP_016 MEEPTSSTNENKMKSPCESNKRKVDK-KKNLHRASAPEQSLKETEKAKYPTL-VFYCRKN
10 20 30 40 50
70 80 90 100 110 120
pF1KB7 TKINSNQLEKDQSRENSINPVQEEEDEGLDSAEGSSQEDEDLDSSEGSSQEDEDLDSSEG
: ::::::..: :.: .:..:. : :: . :: :. :.
XP_016 KKRNSNQLENNQPTESSTDPIKEKGD--LDISAGSPQDGEEEKDLVFLGARACLEEHIRR
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB7 SSQEDEDLDSSEGSSQEDEDLDSSEGSSQEDEDLDPPEGSSQEDEDLDSSEGSSQEGGED
XP_016 SVLYVGDSDTLSKMKTSESPPSGHIPQSGVFCNSPNAVSN
120 130 140 150
180 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 07:02:14 2016 done: Fri Nov 4 07:02:15 2016
Total Scan time: 5.620 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]