Result of FASTA (ccds) for pF1KB7213
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB7213, 142 aa
  1>>>pF1KB7213 142 - 142 aa - 142 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 4.7140+/-0.000691; mu= 15.0543+/- 0.041
 mean_var=74.1098+/-14.378, 0's: 0 Z-trim(111.0): 20  B-trim: 43 in 1/50
 Lambda= 0.148983
 statistics sampled from 12030 (12040) to 12030 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.762), E-opt: 0.2 (0.37), width:  16
 Scan time:  1.520

The best scores are:                                      opt bits E(32554)
CCDS200.1 PLA2G2E gene_id:30814|Hs108|chr1         ( 142) 1058 235.7 7.3e-63
CCDS201.1 PLA2G2A gene_id:5320|Hs108|chr1          ( 144)  487 113.0 6.5e-26
CCDS202.1 PLA2G5 gene_id:5322|Hs108|chr1           ( 138)  428 100.3 4.1e-22
CCDS203.1 PLA2G2D gene_id:26279|Hs108|chr1         ( 145)  427 100.1 4.9e-22
CCDS204.2 PLA2G2F gene_id:64600|Hs108|chr1         ( 211)  422 99.2 1.4e-21
CCDS10555.1 PLA2G10 gene_id:8399|Hs108|chr16       ( 165)  397 93.7 4.7e-20
CCDS9195.1 PLA2G1B gene_id:5319|Hs108|chr12        ( 148)  308 74.5 2.5e-14
CCDS47919.1 OC90 gene_id:729330|Hs108|chr8         ( 477)  277 68.4 5.8e-12


>>CCDS200.1 PLA2G2E gene_id:30814|Hs108|chr1              (142 aa)
 initn: 1058 init1: 1058 opt: 1058  Z-score: 1242.1  bits: 235.7 E(32554): 7.3e-63
Smith-Waterman score: 1058; 100.0% identity (100.0% similar) in 142 aa overlap (1-142:1-142)

               10        20        30        40        50        60
pF1KB7 MKSPHVLVFLCLLVALVTGNLVQFGVMIEKMTGKSALQYNDYGCYCGIGGSHWPVDQTDW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS20 MKSPHVLVFLCLLVALVTGNLVQFGVMIEKMTGKSALQYNDYGCYCGIGGSHWPVDQTDW
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 CCHAHDCCYGRLEKLGCEPKLEKYLFSVSERGIFCAGRTTCQRLTCECDKRAALCFRRNL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS20 CCHAHDCCYGRLEKLGCEPKLEKYLFSVSERGIFCAGRTTCQRLTCECDKRAALCFRRNL
               70        80        90       100       110       120

              130       140  
pF1KB7 GTYNRKYAHYPNKLCTGPTPPC
       ::::::::::::::::::::::
CCDS20 GTYNRKYAHYPNKLCTGPTPPC
              130       140  

>>CCDS201.1 PLA2G2A gene_id:5320|Hs108|chr1               (144 aa)
 initn: 500 init1: 440 opt: 487  Z-score: 578.8  bits: 113.0 E(32554): 6.5e-26
Smith-Waterman score: 487; 53.6% identity (67.4% similar) in 138 aa overlap (6-142:9-144)

                  10        20        30         40        50      
pF1KB7    MKSPHVLVFLCLLVALVTGNLVQFGVMIEKMTGK-SALQYNDYGCYCGIGGSHWPVD
               :.... :: :   ::::.:  ::.  ::: .::.:. :::.::.::   : :
CCDS20 MKTLLLLAVIMIFGLLQA--HGNLVNFHRMIKLTTGKEAALSYGFYGCHCGVGGRGSPKD
               10          20        30        40        50        

         60        70        80        90       100       110      
pF1KB7 QTDWCCHAHDCCYGRLEKLGCEPKLEKYLFSVSERGIFCAGRTTCQRLTCECDKRAALCF
        :: :: .::::: :::: ::  :. .: :: :   : :: . .:.   ::::: :: ::
CCDS20 ATDRCCVTHDCCYKRLEKRGCGTKFLSYKFSNSGSRITCAKQDSCRSQLCECDKAAATCF
       60        70        80        90       100       110        

        120       130       140  
pF1KB7 RRNLGTYNRKYAHYPNKLCTGPTPPC
        ::  :::.:: .: :: : : :: :
CCDS20 ARNKTTYNKKYQYYSNKHCRGSTPRC
      120       130       140    

>>CCDS202.1 PLA2G5 gene_id:5322|Hs108|chr1                (138 aa)
 initn: 445 init1: 358 opt: 428  Z-score: 510.5  bits: 100.3 E(32554): 4.1e-22
Smith-Waterman score: 428; 45.7% identity (66.7% similar) in 129 aa overlap (9-136:10-138)

                10        20        30         40        50        
pF1KB7  MKSPHVLVFLCLLVALVTGNLVQFGVMIEKMTGKSAL-QYNDYGCYCGIGGSHWPVDQT
                ::   :  : :.:...  ::::.:::.:: .:. :::::: ::   : : :
CCDS20 MKGLLPLAWFLACSVPAVQGGLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDGT
               10        20        30        40        50        60

       60        70        80        90       100       110        
pF1KB7 DWCCHAHDCCYGRLEKLGCEPKLEKYLFSVSERGIFCAGRTTCQRLTCECDKRAALCFRR
       :::: ::: ::::::. ::. . ..: .  .   . :     :.   : ::.. . :..:
CCDS20 DWCCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTCEPGPFCHVNLCACDRKLVYCLKR
               70        80        90       100       110       120

      120       130       140  
pF1KB7 NLGTYNRKYAHYPNKLCTGPTPPC
       :: .:: .: ..:: ::.      
CCDS20 NLRSYNPQYQYFPNILCS      
              130              

>>CCDS203.1 PLA2G2D gene_id:26279|Hs108|chr1              (145 aa)
 initn: 351 init1: 210 opt: 427  Z-score: 509.0  bits: 100.1 E(32554): 4.9e-22
Smith-Waterman score: 427; 39.2% identity (67.1% similar) in 143 aa overlap (7-142:3-145)

               10             20        30         40        50    
pF1KB7 MKSPHVLVFLCLLVAL-----VTGNLVQFGVMIEKMTGK-SALQYNDYGCYCGIGGSHWP
             :..:: ::..     . :...... :....:::   :.:  :::.::.::   :
CCDS20     MELALLCGLVVMAGVIPIQGGILNLNKMVKQVTGKMPILSYWPYGCHCGLGGRGQP
                   10        20        30        40        50      

           60        70        80        90       100        110   
pF1KB7 VDQTDWCCHAHDCCYGRLEKLGCEPKLEKYLFSVSERGIFCAGRTT-CQRLTCECDKRAA
        : :::::..::::: .:.  ::    . : .. :. .: :. . . :..  : :::..:
CCDS20 KDATDWCCQTHDCCYDHLKTQGCSIYKDYYRYNFSQGNIHCSDKGSWCEQQLCACDKEVA
         60        70        80        90       100       110      

           120       130       140  
pF1KB7 LCFRRNLGTYNRKYAHYPNKLCTGPTPPC
       .:..::: ::...   :    : : :: :
CCDS20 FCLKRNLDTYQKRLRFYWRPHCRGQTPGC
        120       130       140     

>>CCDS204.2 PLA2G2F gene_id:64600|Hs108|chr1              (211 aa)
 initn: 413 init1: 242 opt: 422  Z-score: 501.2  bits: 99.2 E(32554): 1.4e-21
Smith-Waterman score: 422; 43.8% identity (69.5% similar) in 128 aa overlap (19-142:63-188)

                           10        20        30         40       
pF1KB7             MKSPHVLVFLCLLVALVTGNLVQFGVMIEKMTGKSA-LQYNDYGCYCG
                                     :.:... .:.: .::.:: :..  ::::::
CCDS20 CPSRTSRSSLGMKKFFTVAILAGSVLSTAHGSLLNLKAMVEAVTGRSAILSFVGYGCYCG
             40        50        60        70        80        90  

        50        60        70        80         90         100    
pF1KB7 IGGSHWPVDQTDWCCHAHDCCYGRLEKLGCEPKLEKYLFSV-SERGIFCA--GRTTCQRL
       .::   : :..::::::::::: .:   ::.: ...:  .. ..  : :.  ..: :.. 
CCDS20 LGGRGQPKDEVDWCCHAHDCCYQELFDQGCHPYVDHYDHTIENNTEIVCSDLNKTECDKQ
            100       110       120       130       140       150  

          110       120       130       140                        
pF1KB7 TCECDKRAALCFRRNLGTYNRKYAHYPNKLCTGPTPPC                      
       :: :::  .::.  .  :: ..:  . :  : :::: :                      
CCDS20 TCMCDKNMVLCLMNQ--TYREEYRGFLNVYCQGPTPNCSIYEPPPEEVTCSHQSPAPPAP
            160         170       180       190       200       210

CCDS20 P
        

>>CCDS10555.1 PLA2G10 gene_id:8399|Hs108|chr16            (165 aa)
 initn: 396 init1: 252 opt: 397  Z-score: 473.5  bits: 93.7 E(32554): 4.7e-20
Smith-Waterman score: 397; 42.7% identity (68.2% similar) in 110 aa overlap (34-142:57-164)

            10        20        30        40        50        60   
pF1KB7 PHVLVFLCLLVALVTGNLVQFGVMIEKMTGKSALQYNDYGCYCGIGGSHWPVDQTDWCCH
                                     .. . :  :::.::.::   : :  :::::
CCDS10 GPGSGEASRILRVHRRGILELAGTVGCVGPRTPIAYMKYGCFCGLGGHGQPRDAIDWCCH
         30        40        50        60        70        80      

            70        80        90        100       110       120  
pF1KB7 AHDCCYGRLEKLGCEPKLEKYLFSVSERGIFCA-GRTTCQRLTCECDKRAALCFRRNLGT
       .::::: : :. :: :: :.: ..  .....:. ... ::.: :.::.. : :. ..   
CCDS10 GHDCCYTRAEEAGCSPKTERYSWQCVNQSVLCGPAENKCQELLCKCDQEIANCLAQT--E
         90       100       110       120       130       140      

            130       140   
pF1KB7 YNRKYAHYPNKLCTGPTPPC 
       :: ::  ::. ::   .: : 
CCDS10 YNLKYLFYPQFLCEPDSPKCD
          150       160     

>>CCDS9195.1 PLA2G1B gene_id:5319|Hs108|chr12             (148 aa)
 initn: 258 init1: 202 opt: 308  Z-score: 370.7  bits: 74.5 E(32554): 2.5e-14
Smith-Waterman score: 308; 39.2% identity (64.2% similar) in 120 aa overlap (23-133:26-143)

                  10        20        30          40        50     
pF1KB7    MKSPHVLVFLCLLVALVTGNLVQFGVMIEKMTGKSA--LQYNDYGCYCGIGGSHWPV
                                ::  ::. .   :   :.::.::::::.:::  ::
CCDS91 MKLLVLAVLLTVAAADSGISPRAVWQFRKMIKCVIPGSDPFLEYNNYGCYCGLGGSGTPV
               10        20        30        40        50        60

          60        70              80        90       100         
pF1KB7 DQTDWCCHAHDCCYGRLEKL-GCE-----PKLEKYLFSVSERGIFCAGRTT-CQRLTCEC
       :. : ::..:: :: . .:: .:.     :  . : .: :  .: :....  :. . :.:
CCDS91 DELDKCCQTHDNCYDQAKKLDSCKFLLDNPYTHTYSYSCSGSAITCSSKNKECEAFICNC
               70        80        90       100       110       120

      110       120       130       140  
pF1KB7 DKRAALCFRRNLGTYNRKYAHYPNKLCTGPTPPC
       :. ::.:: .  . ::. . .  .:         
CCDS91 DRNAAICFSK--APYNKAHKNLDTKKYCQS    
              130         140            

>>CCDS47919.1 OC90 gene_id:729330|Hs108|chr8              (477 aa)
 initn: 203 init1: 165 opt: 277  Z-score: 328.3  bits: 68.4 E(32554): 5.8e-12
Smith-Waterman score: 277; 33.1% identity (60.5% similar) in 124 aa overlap (23-142:307-425)

                       10        20        30        40        50  
pF1KB7         MKSPHVLVFLCLLVALVTGNLVQFGVMIEKMTGKSALQYNDYGCYCGIGGSH
                                     :.: :.  .:..   ....::::::  :  
CCDS47 ENDPEETTEKACDRFTFLHLGSGDNMQVMPQLGEMLFCLTSRCPEEFESYGCYCGQEGRG
        280       290       300       310       320       330      

             60        70        80           90       100         
pF1KB7 WPVDQTDWCCHAHDCCYGRLEKLGCEPKLEKYLFS---VSERGIFCAGRTTCQRLTCECD
        : :. : :: .: ::  ....:::   ::.  .:     ..   :.:.. :..: : ::
CCDS47 EPRDDLDRCCLSHHCCLEQVRRLGCL--LERLPWSPVVCVDHTPKCGGQSLCEKLLCACD
        340       350       360         370       380       390    

     110       120       130        140                            
pF1KB7 KRAALCFRRNLGTYNRKYAHYPNKL-CTGPTPPC                          
       . :: :.    ...:..  . :..: : :    :                          
CCDS47 QTAAECMTS--ASFNQSL-KSPSRLGCPGQPAACEDSLHPVPAAPTLGSSSEEDSEEDPP
          400         410        420       430       440       450 

CCDS47 QEDLGRAKRFLRKSLGPLGIGPLHGR
             460       470       




142 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 06:01:15 2016 done: Fri Nov  4 06:01:16 2016
 Total Scan time:  1.520 Total Display time: -0.030

Function used was FASTA [36.3.4 Apr, 2011]
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