Result of FASTA (ccds) for pF1KB7184
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB7184, 221 aa
  1>>>pF1KB7184 221 - 221 aa - 221 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.4651+/-0.000724; mu= 12.4916+/- 0.044
 mean_var=61.3416+/-12.185, 0's: 0 Z-trim(109.1): 21  B-trim: 5 in 1/51
 Lambda= 0.163756
 statistics sampled from 10633 (10648) to 10633 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.73), E-opt: 0.2 (0.327), width:  16
 Scan time:  2.180

The best scores are:                                      opt bits E(32554)
CCDS4652.1 GPX5 gene_id:2880|Hs108|chr6            ( 221) 1517 366.5 7.5e-102
CCDS43389.1 GPX3 gene_id:2878|Hs108|chr5           ( 226) 1082 263.7 6.6e-71
CCDS43432.1 GPX6 gene_id:257202|Hs108|chr6         ( 221) 1046 255.2 2.4e-68
CCDS43091.1 GPX1 gene_id:2876|Hs108|chr3           ( 203)  597 149.1 1.9e-36
CCDS4653.1 GPX5 gene_id:2880|Hs108|chr6            ( 100)  545 136.7   5e-33
CCDS41964.1 GPX2 gene_id:2877|Hs108|chr14          ( 190)  540 135.7   2e-32
CCDS569.1 GPX7 gene_id:2882|Hs108|chr1             ( 187)  283 74.9 3.7e-14


>>CCDS4652.1 GPX5 gene_id:2880|Hs108|chr6                 (221 aa)
 initn: 1517 init1: 1517 opt: 1517  Z-score: 1942.0  bits: 366.5 E(32554): 7.5e-102
Smith-Waterman score: 1517; 100.0% identity (100.0% similar) in 221 aa overlap (1-221:1-221)

               10        20        30        40        50        60
pF1KB7 MTTQLRVVHLLPLLLACFVQTSPKQEKMKMDCHKDEKGTIYDYEAIALNKNEYVSFKQYV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MTTQLRVVHLLPLLLACFVQTSPKQEKMKMDCHKDEKGTIYDYEAIALNKNEYVSFKQYV
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 GKHILFVNVATYCGLTAQYPELNALQEELKPYGLVVLGFPCNQFGKQEPGDNKEILPGLK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 GKHILFVNVATYCGLTAQYPELNALQEELKPYGLVVLGFPCNQFGKQEPGDNKEILPGLK
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 YVRPGGGFVPSFQLFEKGDVNGEKEQKVFSFLKHSCPHPSEILGTFKSISWDPVKVHDIR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 YVRPGGGFVPSFQLFEKGDVNGEKEQKVFSFLKHSCPHPSEILGTFKSISWDPVKVHDIR
              130       140       150       160       170       180

              190       200       210       220 
pF1KB7 WNFEKFLVGPDGIPVMRWSHRATVSSVKTDILAYLKQFKTK
       :::::::::::::::::::::::::::::::::::::::::
CCDS46 WNFEKFLVGPDGIPVMRWSHRATVSSVKTDILAYLKQFKTK
              190       200       210       220 

>>CCDS43389.1 GPX3 gene_id:2878|Hs108|chr5                (226 aa)
 initn: 1077 init1: 1077 opt: 1082  Z-score: 1386.4  bits: 263.7 E(32554): 6.6e-71
Smith-Waterman score: 1082; 70.5% identity (87.1% similar) in 217 aa overlap (1-217:1-217)

               10        20        30        40        50        60
pF1KB7 MTTQLRVVHLLPLLLACFVQTSPKQEKMKMDCHKDEKGTIYDYEAIALNKNEYVSFKQYV
       :.  :..  :: :::: ::. :  ::: :::::   .::::.: :.... .::. ::::.
CCDS43 MARLLQASCLLSLLLAGFVSQSRGQEKSKMDCHGGISGTIYEYGALTIDGEEYIPFKQYA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 GKHILFVNVATYCGLTAQYPELNALQEELKPYGLVVLGFPCNQFGKQEPGDNKEILPGLK
       ::..::::::.:::::.:: ::::::::: :.:::.::::::::::::::.:.:::: ::
CCDS43 GKYVLFVNVASYCGLTGQYIELNALQEELAPFGLVILGFPCNQFGKQEPGENSEILPTLK
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 YVRPGGGFVPSFQLFEKGDVNGEKEQKVFSFLKHSCPHPSEILGTFKSISWDPVKVHDIR
       ::::::::::.:::::::::::::::: ..:::.:::  ::.:::   . :.:.::::::
CCDS43 YVRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKNSCPPTSELLGTSDRLFWEPMKVHDIR
              130       140       150       160       170       180

              190       200       210       220      
pF1KB7 WNFEKFLVGPDGIPVMRWSHRATVSSVKTDILAYLKQFKTK     
       ::::::::::::::.::: ::.:::.:: :::.:...         
CCDS43 WNFEKFLVGPDGIPIMRWHHRTTVSNVKMDILSYMRRQAALGVKRK
              190       200       210       220      

>>CCDS43432.1 GPX6 gene_id:257202|Hs108|chr6              (221 aa)
 initn: 1028 init1: 1008 opt: 1046  Z-score: 1340.6  bits: 255.2 E(32554): 2.4e-68
Smith-Waterman score: 1046; 67.3% identity (88.2% similar) in 220 aa overlap (1-220:1-220)

               10        20        30        40        50        60
pF1KB7 MTTQLRVVHLLPLLLACFVQTSPKQEKMKMDCHKDEKGTIYDYEAIALNKNEYVSFKQYV
       :  :...  :. ..:. :.: . : .. :.::.:   ::::.: :..:: .::..:::..
CCDS43 MFQQFQASCLVLFFLVGFAQQTLKPQNRKVDCNKGVTGTIYEYGALTLNGEEYIQFKQFA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 GKHILFVNVATYCGLTAQYPELNALQEELKPYGLVVLGFPCNQFGKQEPGDNKEILPGLK
       :::.::::::.::::.:::::::::::::: .:..::.:::::::::::: :.::: :::
CCDS43 GKHVLFVNVAAYCGLAAQYPELNALQEELKNFGVIVLAFPCNQFGKQEPGTNSEILLGLK
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 YVRPGGGFVPSFQLFEKGDVNGEKEQKVFSFLKHSCPHPSEILGTFKSISWDPVKVHDIR
       :: ::.:::::::::::::::::::::::.:::.:::  :..::. ... :.:.::::::
CCDS43 YVCPGSGFVPSFQLFEKGDVNGEKEQKVFTFLKNSCPPTSDLLGSSSQLFWEPMKVHDIR
              130       140       150       160       170       180

              190       200       210       220 
pF1KB7 WNFEKFLVGPDGIPVMRWSHRATVSSVKTDILAYLKQFKTK
       ::::::::::::.:::.: :.: ::.::.::: :::::.: 
CCDS43 WNFEKFLVGPDGVPVMHWFHQAPVSTVKSDILEYLKQFNTH
              190       200       210       220 

>>CCDS43091.1 GPX1 gene_id:2876|Hs108|chr3                (203 aa)
 initn: 561 init1: 350 opt: 597  Z-score: 767.9  bits: 149.1 E(32554): 1.9e-36
Smith-Waterman score: 597; 50.0% identity (73.9% similar) in 184 aa overlap (39-217:15-198)

       10        20        30        40        50        60        
pF1KB7 HLLPLLLACFVQTSPKQEKMKMDCHKDEKGTIYDYEAIALNKNEYVSFKQYVGKHILFVN
                                     ..: . :  :  .: ::. .  :: .:. :
CCDS43                 MCAARLAAAAAAAQSVYAFSARPLAGGEPVSLGSLRGKVLLIEN
                               10        20        30        40    

       70         80        90       100       110       120       
pF1KB7 VATYCGLTAQ-YPELNALQEELKPYGLVVLGFPCNQFGKQEPGDNKEILPGLKYVRPGGG
       ::. :: :.. : ..: ::..: : :::::::::::::.:: . :.::: .:::::::::
CCDS43 VASLCGTTVRDYTQMNELQRRLGPRGLVVLGFPCNQFGHQENAKNEEILNSLKYVRPGGG
           50        60        70        80        90       100    

       130       140       150       160           170       180   
pF1KB7 FVPSFQLFEKGDVNGEKEQKVFSFLKHSCPHPSE----ILGTFKSISWDPVKVHDIRWNF
       : :.:.:::: .:::   . .:.::... : ::.    ..   : :.:.::  .:. :::
CCDS43 FEPNFMLFEKCEVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDVAWNF
          110       120       130       140       150       160    

           190       200       210       220  
pF1KB7 EKFLVGPDGIPVMRWSHRATVSSVKTDILAYLKQFKTK 
       :::::::::.:. :.:.:  . ... :: : :.:     
CCDS43 EKFLVGPDGVPLRRYSRRFQTIDIEPDIEALLSQGPSCA
          170       180       190       200   

>>CCDS4653.1 GPX5 gene_id:2880|Hs108|chr6                 (100 aa)
 initn: 560 init1: 545 opt: 545  Z-score: 706.5  bits: 136.7 E(32554): 5e-33
Smith-Waterman score: 545; 92.1% identity (96.6% similar) in 89 aa overlap (1-89:1-89)

               10        20        30        40        50        60
pF1KB7 MTTQLRVVHLLPLLLACFVQTSPKQEKMKMDCHKDEKGTIYDYEAIALNKNEYVSFKQYV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MTTQLRVVHLLPLLLACFVQTSPKQEKMKMDCHKDEKGTIYDYEAIALNKNEYVSFKQYV
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 GKHILFVNVATYCGLTAQYPELNALQEELKPYGLVVLGFPCNQFGKQEPGDNKEILPGLK
       :::::::::::::::::::: ...  :.:                               
CCDS46 GKHILFVNVATYCGLTAQYPGMSVQGEDLYLVSSFLRKGM                    
               70        80        90       100                    

>>CCDS41964.1 GPX2 gene_id:2877|Hs108|chr14               (190 aa)
 initn: 482 init1: 313 opt: 540  Z-score: 695.6  bits: 135.7 E(32554): 2e-32
Smith-Waterman score: 540; 46.4% identity (72.1% similar) in 183 aa overlap (39-216:7-187)

       10        20        30        40        50        60        
pF1KB7 HLLPLLLACFVQTSPKQEKMKMDCHKDEKGTIYDYEAIALNKNEYVSFKQYVGKHILFVN
                                     ..::  ::.:. .: :.:. . :. .:. :
CCDS41                         MAFIAKSFYDLSAISLD-GEKVDFNTFRGRAVLIEN
                                       10         20        30     

       70         80        90       100       110       120       
pF1KB7 VATYCGLTAQ-YPELNALQEELKPYGLVVLGFPCNQFGKQEPGDNKEILPGLKYVRPGGG
       ::. :: :.. . .:: :: .. :  ::::::::::::.::  .:.::: .:::::::::
CCDS41 VASLCGTTTRDFTQLNELQCRF-PRRLVVLGFPCNQFGHQENCQNEEILNSLKYVRPGGG
          40        50         60        70        80        90    

       130       140       150       160           170       180   
pF1KB7 FVPSFQLFEKGDVNGEKEQKVFSFLKHSCPHPSE----ILGTFKSISWDPVKVHDIRWNF
       . :.: : .: .:::..:. ::..:: . :.: .    ..   : : :.::.  :. :::
CCDS41 YQPTFTLVQKCEVNGQNEHPVFAYLKDKLPYPYDDPFSLMTDPKLIIWSPVRRSDVAWNF
          100       110       120       130       140       150    

           190       200       210       220 
pF1KB7 EKFLVGPDGIPVMRWSHRATVSSVKTDILAYLKQFKTK
       ::::.::.: :  :.:.   . ... ::   ::     
CCDS41 EKFLIGPEGEPFRRYSRTFPTINIEPDIKRLLKVAI  
          160       170       180       190  

>>CCDS569.1 GPX7 gene_id:2882|Hs108|chr1                  (187 aa)
 initn: 212 init1: 153 opt: 283  Z-score: 367.6  bits: 74.9 E(32554): 3.7e-14
Smith-Waterman score: 327; 34.6% identity (61.7% similar) in 188 aa overlap (32-218:18-179)

              10        20        30        40        50        60 
pF1KB7 TTQLRVVHLLPLLLACFVQTSPKQEKMKMDCHKDEKGTIYDYEAIALNKNEYVSFKQYVG
                                     : ..:.  .::..:. . ... ::...: :
CCDS56              MVAATVAAAWLLLWAAACAQQEQD-FYDFKAVNI-RGKLVSLEKYRG
                            10        20         30         40     

              70         80        90       100       110       120
pF1KB7 KHILFVNVATYCGLTAQ-YPELNALQEELKPYGLVVLGFPCNQFGKQEPGDNKEILPGLK
       .  : ::::. ::.: : :  :. ::..: :. . ::.:::::::.::: .::::    .
CCDS56 SVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQEPDSNKEI---ES
          50        60        70        80        90       100     

              130       140       150       160       170       180
pF1KB7 YVRPGGGFVPSFQLFEKGDVNGEKEQKVFSFLKHSCPHPSEILGTFKSISWDPVKVHDIR
       ..:    .  :: .: :  :.:   . .:..: ..  .             .:.      
CCDS56 FARR--TYSVSFPMFSKIAVTGTGAHPAFKYLAQTSGK-------------EPT------
              110       120       130                    140       

              190       200       210       220      
pF1KB7 WNFEKFLVGPDGIPVMRWSHRATVSSVKTDILAYLKQFKTK     
       ::: :.::.:::  :  :.  ..:  :. .: : ....        
CCDS56 WNFWKYLVAPDGKVVGAWDPTVSVEEVRPQITALVRKLILLKREDL
             150       160       170       180       




221 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 05:40:29 2016 done: Fri Nov  4 05:40:30 2016
 Total Scan time:  2.180 Total Display time: -0.010

Function used was FASTA [36.3.4 Apr, 2011]
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