GENSCAN 1.0	Date run:  4-Nov-116	Time: 05:39:12

Sequence gi568815591f:95385972_95637756 : 251785 bp : 38.45% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +    416    579  164  1  2   70   72   100 0.842   5.85
 1.02 Term +    898   1276  379  1  1   31   52   223 0.734   6.28
 1.03 PlyA +   1424   1429    6                               1.05

 2.04 PlyA -   2679   2674    6                               1.05
 2.03 Term -   4238   4135  104  0  2  106   42    56 0.530   0.26
 2.02 Intr -   8743   8673   71  0  2   66   76   138 0.649   8.31
 2.01 Init -  10379  10306   74  2  2   98   95   161 0.999  16.42
 2.00 Prom -  13167  13128   40                              -6.35

 3.06 PlyA -  13648  13643    6                               1.05
 3.05 Term -  19517  19359  159  2  0   53   32    85 0.404  -3.64
 3.04 Intr -  21097  21016   82  0  1   76   93    65 0.577   4.52
 3.03 Intr -  24130  23930  201  0  0  114   16   129 0.682   5.78
 3.02 Intr -  25808  25682  127  0  1   97   75    64 0.984   4.82
 3.01 Init -  26446  26341  106  1  1   65  107    52 0.879   5.23
 3.00 Prom -  33066  33027   40                              -5.05

 4.03 PlyA -  34595  34590    6                               1.05
 4.02 Term -  41489  41159  331  1  1   95   33   138 0.841   2.14
 4.01 Init -  48980  48907   74  2  2  103   96   192 0.609  20.09
 4.00 Prom -  53049  53010   40                              -7.25

 5.00 Prom +  54254  54293   40                              -6.45
 5.01 Init +  64794  64867   74  2  2   65   81    31 0.124   0.69
 5.02 Intr +  74574  74814  241  0  1   17   75   211 0.312   9.33
 5.03 Intr +  74920  75321  402  0  0   55   57   200 0.007   7.30
 5.04 Intr +  85707  85785   79  2  1   68   64    66 0.110   0.41
 5.05 Intr +  87393  87520  128  1  2   48   45    88 0.741  -0.02
 5.06 Term +  87722  87838  117  1  0   64   46   153 0.687   6.26
 5.07 PlyA +  88006  88011    6                               1.05

 6.00 Prom +  92132  92171   40                              -6.85
 6.01 Init + 100001 100187  187  1  1   82   93   154 0.999  14.57
 6.02 Intr + 109787 110086  300  0  0  129   99   112 0.968  12.18
 6.03 Intr + 115374 115427   54  1  0   75   91    61 0.873   3.13
 6.04 Intr + 118367 118420   54  0  0   75   91    61 0.802   3.13
 6.05 Term + 118937 119013   77  0  2   35   47    93 0.381  -3.08
 6.06 PlyA + 119590 119595    6                               1.05

 7.00 Prom + 119607 119646   40                              -5.65
 7.01 Init + 127163 127202   40  1  1   87  116    64 0.890   9.50
 7.02 Intr + 141842 142332  491  0  2  107  100   729 0.124  67.80
 7.03 Intr + 150466 150579  114  0  0   97   84    97 0.807   9.92
 7.04 Term + 164692 164805  114  0  0   76   33    64 0.045  -2.71
 7.05 PlyA + 165028 165033    6                               1.05

 8.02 PlyA - 165649 165644    6                               1.05
 8.01 Sngl - 166606 166238  369  1  0   97   48   268 0.719  19.08
 8.00 Prom - 172562 172523   40                              -8.35

 9.00 Prom + 174755 174794   40                              -3.35
 9.01 Sngl + 181474 181869  396  0  0   69   35   209 0.735   9.70
 9.02 PlyA + 181979 181984    6                               1.05

10.12 PlyA - 183539 183534    6                               1.05
10.11 Term - 199810 199670  141  1  0  113   49   122 0.950   7.75
10.10 Intr - 201152 201039  114  2  0  101   63   109 0.998   9.42
10.09 Intr - 201557 201447  111  2  0   95   91    98 0.999  10.46
10.08 Intr - 201854 201756   99  2  0   77   86   111 0.989   9.19
10.07 Intr - 203301 203212   90  0  0  102   24    58 0.472   0.07
10.06 Intr - 203745 203669   77  1  2   78   86    10 0.975  -1.88
10.05 Intr - 206626 206540   87  2  0   79   95    72 0.983   6.02
10.04 Intr - 206973 206789  185  2  2   15   98   118 0.729   4.01
10.03 Intr - 207799 207728   72  0  0  110   63    75 0.710   4.80
10.02 Intr - 209193 209052  142  1  1   78  119    83 0.992   8.89
10.01 Init - 210322 210193  130  1  1   90   77   266 0.996  24.06
10.00 Prom - 212179 212140   40                              -2.25

11.02 PlyA - 212843 212838    6                               1.05
11.01 Sngl - 219723 219367  357  0  0   72   39   190 0.053   6.83
11.00 Prom - 234223 234184   40                              -3.85


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591f:95385972_95637756|GENSCAN_predicted_peptide_1|180_aa
MDKFLDTYILPRLNQEKVESLNRPITGSEIEAIINSLPTNESPGPDGFTDKFYQRTNDKN
HMIISIDAEKAFDKIQQPFMLKTLNKLGIDRTYLKIIRAIYDKSTANIILNRQKLEAFHL
KTCTRQGCPLSPLLFNIVLEILARAIGQEKEIKGIQLGKEDGKLSLSADDMIVYLENPII

>gi568815591f:95385972_95637756|GENSCAN_predicted_CDS_1|543_bp
atggataaattcctcgacacatacatcctcccaagattaaaccaggaaaaagttgaatct
ctgaatagaccaataacaggctctgaaattgaggcaataattaatagcctaccaaccaat
gaaagtccaggaccagatggattcacagacaaattctaccagagaaccaatgacaaaaac
cacatgattatctcaatagatgcagaaaaggccttcgacaaaattcaacagcccttcatg
ctaaaaactctcaataaactaggtattgatagaacgtatctcaaaataataagagctatt
tatgacaaatccacagccaatatcatactgaataggcaaaaactggaagcattccatttg
aaaacctgcacaagacaaggatgccctctctcaccactcctattcaacatagtattggaa
attctggccagggcaattggacaagagaaagaaataaagggtattcagttaggaaaagag
gatggcaaattgtctctgtctgcagatgacatgattgtatatttagaaaatcccatcatc
tga

>gi568815591f:95385972_95637756|GENSCAN_predicted_peptide_2|82_aa
MGKLVALVLLGVGLSLVGEMFLAFRERVNASREVEPVEPENCHLIEELESGSEDIDILPS
GLAFISSVSIFHAALMLTSIAV

>gi568815591f:95385972_95637756|GENSCAN_predicted_CDS_2|249_bp
atggggaagctcgtggcgctggtcctgctgggggtcggcctgtccttagtcggggagatg
ttcctggcgtttagagaaagggtgaatgcctctcgagaagtggagccagtagaacctgaa
aactgccaccttattgaggaacttgaaagtggctctgaagatattgatatacttcctagt
gggctggcttttatctccagtgtgagtattttccatgctgctctcatgctcacatcaata
gctgtatag

>gi568815591f:95385972_95637756|GENSCAN_predicted_peptide_3|224_aa
MDLKEEKPRARELRISRGFDLASFNPHGISTFIDNDDTVYLFVVNHPEFKNTVEIFKFEE
AENSLLHLKTVKHELLPSVNDITAVGPAHFYATNDHYFSDPFLKYLETYLNLHWANVVYY
SPNEVKVVAEGFDSANGINISPDDKYIYVADILAHEIHVLEKHTNMNLTQLKVLRIQNIL
SEKPTVTTVYANNGSVLQGSSVASVYDGKLLIGTLYHRALYCEL

>gi568815591f:95385972_95637756|GENSCAN_predicted_CDS_3|675_bp
atggatctaaaagaagaaaaaccaagggcacgggaattaagaatcagtcgtgggtttgat
ttggcctcattcaatccacatggcatcagcactttcatagacaacgatgacacagtttat
ctctttgttgtaaaccacccagaattcaagaatacagtggaaatttttaaatttgaagaa
gcagaaaattctctgttgcatctgaaaacagtcaaacatgagcttcttccaagtgtgaat
gacatcacagctgttggaccggcacatttctatgccacaaatgaccactacttctctgat
cctttcttaaagtatttagaaacatacttgaacttacactgggcaaatgttgtttactac
agtccaaatgaagttaaagtggtagcagaaggatttgattcagcaaatgggatcaatatt
tcacctgatgataagtatatctatgttgctgacatattggctcatgaaattcatgttttg
gaaaaacacactaatatgaatttaactcagttgaaggttctccgcatccagaacattcta
tctgagaagcctacagtgactacagtttatgccaacaatgggtctgttctccaaggaagt
tctgtagcctcagtgtatgatgggaagctgctcataggcactttataccacagagccttg
tattgtgaactctaa

>gi568815591f:95385972_95637756|GENSCAN_predicted_peptide_4|134_aa
MGRLVAVGLLGIALALLGERLLALRTQCLSPKPGSYDYTSIQRSLGKQIFALPTTTIETT
REKERGLGMALILSAARVCHPENRSPLTSRELIVLPGKKSGSFLLKKFGSLDGPGRIKAK
PSFSFIKKESQEKN

>gi568815591f:95385972_95637756|GENSCAN_predicted_CDS_4|405_bp
atggggcggctggtggctgtgggcttgctggggatcgcgctggcgctcctgggcgagagg
cttctggcactcagaacacagtgtctttccccaaaacctgggtcatatgactacacctca
atacagcggagtctgggaaagcaaatatttgctttgcccaccactacaatagaaacgaca
agggagaaagaaagggggttgggcatggcgttaattttgtcagccgctagggtctgccac
ccagaaaacagaagtccactaacaagcagggaactgattgttctgccagggaaaaagtct
ggcagtttcctactgaagaaatttggaagtcttgatggtccaggaaggataaaggcaaaa
ccttcattttcttttatcaaaaaggaaagccaagaaaaaaattag

>gi568815591f:95385972_95637756|GENSCAN_predicted_peptide_5|346_aa
MVLQSESSGEPVHLTSASQFFPQLRDLWSFEIDRDDLGYLVEEISKWQSIQEEADHKSLE
NLQLYNTVEKKNPFSGEKFKPAAESCTSNEEPNVNHQDNGENVSRPRDMVPCIPAAEAPA
MANRGQCAAQAIASEGASPKPWQLTCGGCPGRGVLQGQSPHGEHLLGQCKREMWGVETPH
RVPTGALPSGSVRRRPLSSRLHNDRSADSLHCVPGKATDTQCQPMKTARMEVVPCKATEE
CPYMNIRTLEDSSGGNSGVDCSWGKDVKDPRHREGKQLSQESSCLAVRATGLSRTITSSD
EFPAEPGWGIQERIEEAVPVFEAFAIIAGETEPTDGEQWSGTPGLI

>gi568815591f:95385972_95637756|GENSCAN_predicted_CDS_5|1041_bp
atggttttacagtctgagtcttctggtgagcctgtgcacttaaccagcgcttctcagttt
ttcccccaactaagagatctgtggagctttgaaattgacagagatgatttagggtatctg
gtggaagaaatttctaagtggcaaagcattcaagaggaagcagatcataaaagtttggaa
aatttgcagctttacaatacagtagaaaagaaaaacccattttctggggagaaattcaag
ccagctgcagaaagttgcacaagtaatgaggagccaaatgttaatcaccaagacaatggg
gaaaatgtctccaggcctagagacatggtgccctgcatcccagctgctgaagctccagcc
atggctaataggggccaatgtgcagctcaggccattgcttcagagggtgcaagccccaag
ccttggcagcttacgtgtggaggatgtccaggcagaggtgtgctgcaggggcaaagtcct
catggagaacatctgctagggcagtgcaaaagggaaatgtggggggtggagacccctcac
agagtccccactggggcactgcctagtggatctgtgagaagaaggccactatcctccaga
ctccacaatgatagatctgctgacagcttgcactgtgtgcctggaaaagccacagacact
caatgccagcccatgaaaacagccaggatggaagttgtaccctgcaaagccacagaggaa
tgcccttacatgaacattaggactttagaggacagcagtggtggcaacagtggagttgac
tgcagctggggcaaagacgtgaaggacccaaggcacagagagggtaagcagttaagtcag
gagagcagctgcctggctgtgagagccacaggtttatccaggacaataacaagcagtgat
gagttcccagcggagcctggctggggaattcaggagaggattgaagaagcggttcctgtt
tttgaggcatttgcaatcattgctggagagacagaaccaacagatggggaacaatggtca
gggactccaggcctgatttaa

>gi568815591f:95385972_95637756|GENSCAN_predicted_peptide_6|223_aa
MDGTTAPVTKSGAAKLVKRNFLEALKSNDFGKLKAILIQRQIDVDTVFEVEDENMVLASY
KQGYWLPSYKLKSSWATGLHLSVLFGHVECLLVLLDHNATINCRPNGKTPLHVACEMANV
DCVKILCDRGAKLNCYSLSGHTALHFCTTPSSILCAKQLVWRVTQVNHMLGNSLVNEVEH
VTQVNHMLGNSLVNEVEHVSQQLLQSRKACSTKNHTTLQETQP

>gi568815591f:95385972_95637756|GENSCAN_predicted_CDS_6|672_bp
atggacggcaccactgcccctgtcactaaatctggagctgccaagttagttaagagaaat
ttccttgaggcgctaaagtccaatgacttcggaaaattgaaggctattttgatccaaagg
caaatagatgtggacactgtttttgaagtcgaagatgagaatatggttttggcatcttat
aaacaaggttactggttgcctagctataaattgaagtcttcctgggccacaggcctccat
ctctctgtcttgtttggccatgtggaatgtcttctggtgctactggaccacaatgctaca
atcaactgtagacccaatgggaaaacccctcttcacgtggcttgtgaaatggccaatgtg
gattgtgttaagatcctctgtgatcgtggggcaaagctcaattgctactccttaagtgga
cacacagctttgcacttttgtacaactccaagttccattctctgtgccaagcaattggtt
tggagagtgacacaagtcaaccacatgttaggaaattccctggtcaatgaagtggaacat
gtgacacaagtcaaccacatgttaggaaattccctggtcaatgaagtggaacatgtcagt
cagcagttactccagtcccgtaaagcatgttccacgaaaaatcataccacacttcaggaa
acacaaccttaa

>gi568815591f:95385972_95637756|GENSCAN_predicted_peptide_7|252_aa
MVTKCGKPLEAGKGANVNMKTNNQDEETPLHTAAHFGLSELVAFYVEHGAIVDSVNAHME
TPLAIAAYWALRFKEQEYSTEHHLVCRMLLDYKAEVNARDDDFKSPLHKAAWNCDHVLMH
MMLEAGAEANLMDINGCAAIQYVLKVTSVRPAAQPEICYQLLLNHGAARIYPPQFHKVIQ
ACHSCPKAIEVVVNAYEHIRWNTKWRRAIPDDDLERLRPWIFEVEPKENSQQLCPFAQEE
SELLLFLISPLL

>gi568815591f:95385972_95637756|GENSCAN_predicted_CDS_7|759_bp
atggtcacgaaatgtgggaagcctctagaagctggaaaaggggcgaatgtgaacatgaag
accaacaaccaagatgaggagacgcccttgcacacggctgcccacttcggcctttcggag
ctggtggccttctacgtggaacacggggccatagtggacagcgtgaatgcccacatggag
acccccctggccatcgccgcctactgggccctccgctttaaggagcaggagtacagcacg
gagcaccacctggtctgccgcatgctgcttgactacaaagccgaagtcaatgcccgagat
gacgactttaaatctcccctccacaaggcagcctggaactgtgaccacgtgctcatgcac
atgatgctggaagctggcgccgaagccaatctcatggatatcaacggctgtgctgccatc
cagtacgtgctgaaggtcacctccgtgcgccctgctgcccagcctgagatctgctaccag
ctcctgttgaaccatggggctgcccgaatataccctccacagttccataaggtgatacag
gcctgccattcttgtcctaaagcaattgaagttgtagtcaatgcctatgaacacatcaga
tggaacacaaagtggagaagagctatccccgatgatgacttggagagactcaggccgtgg
atctttgaggtagaacccaaggaaaatagtcaacaactttgtccatttgcccaggaagag
tctgagttgttgctgttcctcattagtcctctgctttag

>gi568815591f:95385972_95637756|GENSCAN_predicted_peptide_8|122_aa
MPEPLPSMGSCVAGASPTSAVPCSTAPSPIDHPRAEESGHTMQDWQAAPPAAPVWDPLGE
ASWVPDSGGDLQNLCVDTVYLANLVGTWRTVVSSSGIVNAPISALSKQTTWLYQSAGWGG
AR

>gi568815591f:95385972_95637756|GENSCAN_predicted_CDS_8|369_bp
atgcctgagcctctcccttccatgggctcctgtgtggcaggagcctccccgacaagcgcc
gtcccctgctccaccgcgcccagtcccatcgaccacccaagggctgaggagagcgggcac
acgatgcaggactggcaggcagctccacctgcagccccggtgtgggatccactgggtgaa
gccagctgggtacctgactctggtggggacttgcagaacctttgtgtggacactgtttat
ctagctaatctagtggggacgtggagaaccgttgtgtctagctcagggattgtaaacgca
ccaatcagcgccctgtcaaaacagaccacttggctctaccaatcagcaggatggggtggg
gccagataa

>gi568815591f:95385972_95637756|GENSCAN_predicted_peptide_9|131_aa
MLFCKTNKEKKREESNRCNKNDKRDITTDPTEIQTTIREYYKHLYANKLENLEEMDKFLD
TYTLPRLNQEELESLNRPITGSEIVAIINSLPTKRVQDQMDSQPNSTRDTRRNWYHSSET
IPINRKRGNPP

>gi568815591f:95385972_95637756|GENSCAN_predicted_CDS_9|396_bp
atgctgttttgcaagactaataaagaaaaaaagagagaagaatcaaatagatgcaataaa
aatgataaaagggatatcaccactgatcccacagaaatacaaactaccatcagagaatac
tataaacacctctacgcaaataaactagaaaatctagaagaaatggataaattcctcgac
acatacaccctcccaagactaaaccaggaagaacttgaatctctgaatagaccaataaca
ggttctgaaattgtggcaataatcaatagcttaccaacaaaaagagtccaggaccagatg
gattcacagccgaattctaccagagatacaaggaggaactggtaccattcctctgaaact
attccaatcaatagaaaaagagggaatcctccctaa

>gi568815591f:95385972_95637756|GENSCAN_predicted_peptide_10|415_aa
MKAARFVLRSAGSLNGAGLVPREVEHFSRYSPSPLSMKQLLDFGSENACERTSFAFLRQE
LPVRLANILKEIDILPTQLVNTSSVQLVKSWYIQSLMDLVEFHEKSPDDQKALSDFVDTL
IKVRNRHHNVVPTMAQGIIEYKDACTVDPVTNQNLQYFLDRFYMNRISTRMLMNQHILIF
SDSQTGNPSHIGSIDPNCDVVAVVQGKFPDQPIHIVYVPSHLHHMLFELFKAGPTPNSAV
QVQNSCRWYGSIQSPECAKSTNAMRATVEHQENQPSLTPIEVIVVLGKEDLTIKISDRGG
GVPLRIIDRLFSYTYSTAPTPVMDNSRNAPLAGFGYGLPISRLYAKYFQGDLNLYSLSGY
GTDAIIYLKALSSESIEKLPVFNKSAFKHYQMSSEADDWCIPSREPKNLAKEVAM

>gi568815591f:95385972_95637756|GENSCAN_predicted_CDS_10|1248_bp
atgaaggcggcccgcttcgtgctgcgcagcgctggctcgctcaacggcgccggcctggtg
ccccgagaggtggagcatttctcgcgctacagcccgtccccgctgtccatgaagcagcta
ctggactttggttcagaaaatgcatgtgaaagaacttcttttgcatttttgcgacaagaa
ttgcctgtgagactcgccaacattctgaaggaaattgatatcctcccgacccaattagta
aatacctcttcagtgcaattggttaaaagctggtatatacagagcctgatggatttggtg
gaattccatgagaaaagcccagatgaccagaaagcattatcagactttgtagatacactc
atcaaagttcgaaatagacaccataatgtagtccctacaatggcacaaggaatcatagag
tataaagatgcctgtacagttgacccagtcaccaatcaaaatcttcaatatttcttggat
cgattttacatgaaccgtatttctactcggatgctgatgaaccagcacattcttatattt
agtgactcacagacaggaaacccaagccacattggaagcattgatcctaactgtgatgtg
gtagcagtggtccaaggaaaatttccagaccaaccaattcacatcgtgtatgttccttct
cacctccatcatatgctctttgaactatttaaggctggtcctactcctaactcagcagtt
caggtccagaattcctgtaggtggtatggctccattcagagtccagaatgtgctaagagc
acaaatgcaatgcgggcaacagttgaacaccaggaaaatcagccttcccttacaccaata
gaggttattgttgtcttgggaaaagaagaccttaccattaagatttcagacagaggaggt
ggtgttcccctgagaattattgaccgcctctttagttatacatactccactgcaccaacg
cctgtgatggataattcccggaatgctcctttggctggttttggttacggcttgccaatt
tctcgtctgtatgcaaagtactttcaaggagatctgaatctctactctttatcaggatat
ggaacagatgctatcatctacttaaaggctttgtcttctgagtctatagaaaaacttcca
gtttttaacaagtcagccttcaaacattatcagatgagctctgaggctgatgactggtgt
atcccaagcagggaaccaaagaacctggcaaaagaagtggccatgtga

>gi568815591f:95385972_95637756|GENSCAN_predicted_peptide_11|118_aa
MGAAVRAACQSHAMCPHSSVLGRSMGPGAVEQGVALVRGPSAPSAAAGLGAKPLTARGWQ
HEPAAPSAGPTVPTSTQNSCWPMRVACSPGSRLCLSLHTSLQAEGAGSDLGQPREGLP

>gi568815591f:95385972_95637756|GENSCAN_predicted_CDS_11|357_bp
atgggggctgcagtcagagctgcctgccagtcccacgccatgtgcccacactcctcagtc
cttgggcggtcgatgggaccgggtgctgtggagcagggggtggcgcttgtcaggggaccc
agcgcaccttctgcagctgctggcctaggtgctaagcccctcactgcccggggctggcag
cacgagccggctgctccgagtgcggggcccaccgtgcccacgtccactcagaactcatgc
tggcccatgagagttgcgtgcagccccggttcccgcctgtgcctctccctccacacctcc
ctgcaagcagagggagctggctccgacctcggccagcccagagaggggctcccatag