GENSCAN 1.0	Date run:  4-Nov-116	Time: 04:58:59

Sequence gi568815596f:119580854_119781786 : 200933 bp : 43.72% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   2999   3085   87  1  0   77   46    77 0.348   3.04
 1.02 Intr +   6291   6369   79  2  1   76  110    25 0.200   2.62
 1.03 Intr +  20365  20524  160  2  1   96   22    80 0.175   1.25
 1.04 Intr +  23819  23939  121  2  1   77  102    41 0.655   4.90
 1.05 Intr +  24023  24134  112  1  1   87   86   114 0.994  11.05
 1.06 Intr +  24328  24436  109  2  1   79   44    78 0.868   1.84
 1.07 Intr +  27649  27736   88  1  1  106   77    17 0.833   2.37
 1.08 Intr +  30800  30889   90  1  0   22   90    89 0.710   2.69
 1.09 Term +  34165  34176   12  0  0  145   46     1 0.410  -0.20
 1.10 PlyA +  34619  34624    6                               1.05

 2.00 Prom +  34958  34997   40                              -4.86
 2.01 Init +  38772  38917  146  2  2   78   98    92 0.743   8.79
 2.02 Term +  39017  39767  751  2  1  -51   42   378 0.957  12.22
 2.03 PlyA +  40026  40031    6                               1.05

 3.00 Prom +  43695  43734   40                              -2.46
 3.01 Init +  43819  43951  133  0  1   78   -9    86 0.379  -1.80
 3.02 Intr +  46800  46933  134  1  2   83   74   123 0.990  10.76
 3.03 Intr +  47040  47138   99  2  0   89   51    36 0.513   0.31
 3.04 Intr +  49022  49102   81  1  0   86   71    43 0.822   2.23
 3.05 Intr +  49717  49824  108  0  0   85   77    32 0.825   2.28
 3.06 Intr +  49914  50048  135  2  0   92   78    67 0.912   6.86
 3.07 Intr +  58928  59019   92  1  2   98   99    57 0.868   6.59
 3.08 Intr +  71121  71216   96  0  0   57  100    74 0.514   4.62
 3.09 Term +  75509  75617  109  2  1   52   48   159 0.966   6.28
 3.10 PlyA +  75785  75790    6                               1.05

 4.00 Prom +  86263  86302   40                              -1.46
 4.01 Init +  86547  86717  171  2  0   71   20   145 0.089   5.44
 4.02 Intr +  98216  98423  208  1  1   29   54   133 0.108   2.65
 4.03 Term + 100077 100936  860  1  2   59   45   683 0.465  54.02
 4.04 PlyA + 101245 101250    6                               1.05

 5.00 Prom + 103720 103759   40                              -6.06
 5.01 Init + 104455 104534   80  0  2   90   15   117 0.847   3.24
 5.02 Intr + 105345 105394   50  0  2  104   81    42 0.751   3.42
 5.03 Intr + 108289 108384   96  2  0  130   61     5 0.594   1.98
 5.04 Intr + 109140 109166   27  1  0   74  115     9 0.409   0.29
 5.05 Term + 109648 109859  212  2  2   96   53    98 0.665   4.56
 5.06 PlyA + 113944 113949    6                               1.05

 6.04 PlyA - 115591 115586    6                               1.05
 6.03 Term - 120161 120061  101  0  2  125   55    44 0.800   3.09
 6.02 Intr - 120790 120688  103  1  1   44  110    84 0.925   5.95
 6.01 Init - 121561 121487   75  1  0   52   44    80 0.680   1.11
 6.00 Prom - 125145 125106   40                              -3.76

 7.08 PlyA - 125836 125831    6                               1.05
 7.07 Term - 131150 131045  106  1  1  121   42   101 0.353   6.68
 7.06 Intr - 133251 133055  197  0  2   88   52    69 0.010   1.51
 7.05 Intr - 141697 141668   30  1  0   75  119    -1 0.011   0.03
 7.04 Intr - 158140 157979  162  1  0    5   41   147 0.093   1.87
 7.03 Intr - 178961 178779  183  2  0  102   80    57 0.565   6.28
 7.02 Intr - 179175 179089   87  0  0   93   43    49 0.438   1.07
 7.01 Intr - 179516 179324  193  1  1   47   23   165 0.124   5.39

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596f:119580854_119781786|GENSCAN_predicted_peptide_1|285_aa
MVIYEPGSGPAPDTKSASTLILDFPASRTCSCPVDFEFYITLIQSHQAFAIEPTSGIIPA
NGKMTVTIKFTPFQYGTAQIKMQLWISQFNSQPYECVFTGTCYPNMALPLEEFERLNTLS
KKVNVPPEKAMMHINFHRPPAKPKPQKVKEIEYQNLRFPVDLSNPFAVATVLNQEPGKLK
IKELREVLDQGTEISKTRQMKEALFEQKVRQDIHEEMENHLKWQVHLGKDPMSFKLKKEL
TEEWQKACAKYKLDRGDPILDEEFQRLKTEVSHKRVVRNQEELMA

>gi568815596f:119580854_119781786|GENSCAN_predicted_CDS_1|858_bp
atggtcatctatgaaccaggaagtgggcctgcaccagacaccaaatctgccagcaccttg
atcttggacttcccagcctccagaacttgcagctgccctgtagattttgagttttatatc
accttgattcagtctcatcaagcctttgctattgagccaacatcaggaataattccggct
aatgggaagatgactgtgactattaagtttacaccctttcagtatgggactgcacaaata
aaaatgcagttatggatttcgcagttcaactctcaaccatacgaatgtgtcttcaccgga
acatgctatcccaacatggccttaccattagaagagtttgaaaggttgaataccctttct
aagaaagtaaacgttcctccagaaaaagcaatgatgcatataaattttcaccgaccgcca
gcgaagccgaagcctcagaaggtgaaggaaattgagtaccagaacctcagatttccagta
gatttatcgaatccatttgctgtggcaactgttttaaaccaagaaccaggaaaattgaag
attaaagaattaagagaagttttggaccagggcactgaaatttcaaaaacgagacagatg
aaggaggcactctttgaacagaaagtcagacaggacattcacgaagagatggaaaatcat
cttaagtggcaggtgcaccttggtaaagatcctatgtcttttaaacttaaaaaagagctt
actgaagagtggcaaaaagcatgtgccaaatataagctagacagaggagatcctattttg
gatgaggaatttcagcgacttaaaacagaagttagccataaacgggttgttcgcaatcaa
gaagagctcatggcataa

>gi568815596f:119580854_119781786|GENSCAN_predicted_peptide_2|298_aa
MRKNQCKKAENSKNQNTSSPPKDHNSSTAREQNWMENEFDKLTELGLRRITSLEKNINNL
IELKNTARELHEEYTSIKSQIDQVEERISEIEDQLDEIKREDKIREKRMKRNEQSPQEMW
DYMKRPNLRLTGVPKSDGENGTKLENTLQDIIQENFPNLARQANIQIQEIQRTPQRYSSR
RATPRHIIIRFTKVEMKEKMLRVAREKGHVTHKGKPIRPTADLSAETLQDRREWGPIFNI
LTEKHFQPTISYPAKLSFISEGEIKSFTDKQMLRDFVTTRPALQELLKEAINLERKIR

>gi568815596f:119580854_119781786|GENSCAN_predicted_CDS_2|897_bp
atgaggaaaaaccagtgcaaaaaggctgaaaattccaaaaaccagaatacctcctctcct
ccaaaggatcacaattcctcgacagcaagggaacaaaactggatggagaatgagtttgac
aaattgacagaattaggcctcagaagaataaccagtttagagaagaacataaataacctg
atagagctgaaaaacacagcacgagaacttcatgaagaatacacaagtatcaagagccaa
atcgatcaagtggaagaaaggatatcagagattgaagatcaacttgatgaaataaagcgt
gaagacaagattagagaaaaaagaatgaaaaggaatgaacaaagcccccaagaaatgtgg
gactatatgaaaagaccaaacctacgtttgactggtgtacctaaaagtgatggggagaat
ggaaccaagttggaaaacactcttcaggatattatccaggagaacttccccaacctagca
agacaggccaatattcaaattcaggaaatacagagaacaccacaaagatactcctcgaga
agagcaaccccaagacacataatcatcagattcaccaaggttgaaatgaaggaaaaaatg
ttaagggtagccagagagaaaggtcatgttacccacaaagggaagcccatcagaccaaca
gcggacctctctgcagaaaccctacaagaccgaagagagtgggggccaatattcaacatt
ctcacagaaaagcattttcaacccacaatttcatatccagccaaactaagcttcataagt
gaaggagaaataaaatcctttacagacaagcaaatgctgagagattttgtcaccaccagg
ccagccttacaagagctcctgaaggaagcaataaatttggaaaggaaaatccggtaa

>gi568815596f:119580854_119781786|GENSCAN_predicted_peptide_3|328_aa
MEYYAAIRKDEFMSFAGTWMKLEIIILSKLTQEQKTKHRMFSLIKANFFKFFLRRISQDD
YTSRFSVSPKEVLPFAFPDCSPPQDSNELRLQRKMRRVLPVENQGSSPAICLAPDTPAQS
SLAPDGLGLVPIKSSEVQIKQSYSFFNLQVPQLYKIKRYQPFSVHKSSTSYRPQKLARAL
KQGAEDEVTTITALPKQDSTTQLSGKTSVLSMKPPEALAMSLDYDPLYVFDIIPGIMHWK
SFQSLVLSSLPDPSKMETTKSELCEQNVEVMLTPEMIKVEFPMLNYKDIRKEKEVKDQAQ
PAEKAGEKLLEEMRNLRGKALNTYLILE

>gi568815596f:119580854_119781786|GENSCAN_predicted_CDS_3|987_bp
atggaatactatgcagccataagaaaggatgagttcatgtcctttgcagggacatggatg
aagctagaaatcatcattcttagcaaactaacacaggaacagaaaaccaaacaccgcatg
ttctccctcataaaggcgaatttcttcaaattcttcctgaggcggatcagtcaggatgat
tataccagccggttctctgtgtcgcccaaggaggtgctgcccttcgctttcccagactgc
agcccaccccaggactccaacgagttgaggctccaaaggaagatgaggagagtattacca
gtggaaaaccagggatcatctcctgccatctgccttgctcctgatacacctgcacagagc
tccctggctcctgatggccttggactggtcccaattaagtcttcagaagttcaaatcaag
cagagttattccttcttcaatctgcaggttcctcaactgtacaaaattaagagatatcag
ccattctctgtccacaagtcttcaacaagttacagacctcaaaagcttgcccgagcccta
aagcaaggagctgaggatgaagtcaccaccatcacagcccttccgaaacaggactccaca
actcagctctctggcaaaacatcagtcttgagcatgaaaccacctgaggccttagccatg
tctctagattatgatcctctgtatgtttttgacattattcccggaataatgcactggaaa
agcttccagtccctggttctctcctccctgccggacccctccaagatggagaccacaaag
agtgagctctgtgagcagaatgtagaagttatgttgactccagaaatgatcaaagtggaa
ttccctatgttgaactacaaggacatcaggaaggagaaagaagtgaaagatcaagcacaa
ccagcagagaaggccggagagaagctgctcgaggagatgaggaacctgcggggcaaagca
ctcaacacatacctgattctagaatga

>gi568815596f:119580854_119781786|GENSCAN_predicted_peptide_4|412_aa
MGKDFMTKTPKAMATKAKIDKWDLIKLKSFYTAKETIVSVNNLQNGRKCLQSTHLTKISG
RRAPPPEVPIPRSGAGELRLPKSPPPDPRPACFAAALPRAHVGVPSGGGGERTDEREGPF
SGLMRPGLFGVPISYHLFPDPVVQWLYQYWPQGQPAPLPPQLQSLFQEVLQDIGVPSGHC
YKPFTTFTFQPVSAGFPRLPAGAVVGIPASFLGDLVINTNHPVVIHGHTVDWRSPAGARL
RASLTLSREAQKFALAREVVYLESSTTAVHALLAPACLAGTWALGVGAKYTLGLHAGPMN
LRAAFSLVAAVAGFVAYAFSQDSLTHAVESWLDRRTASLSAAYACGGVEFYEKLLSGNLA
LRSLLGKDGEKLYTPSGNIVPRHLFRIKHLPYTTRRDSVLQMWRGMLNPGRS

>gi568815596f:119580854_119781786|GENSCAN_predicted_CDS_4|1239_bp
atgggcaaagacttcatgactaaaacaccaaaagcaatggcaacaaaagccaaaattgac
aaatgggatctaattaaactaaagagcttctacacagcaaaagaaactatcgtcagtgtg
aacaacctacagaatgggagaaaatgtttacaatctacccatctgacaaagatctccggc
cggcgagctccgccccctgaagtccccatcccaagatccggggccggcgagctccgcctc
ccgaagtccccgcccccagatccccggccggcgtgctttgcggccgccctgccgcgcgca
catgtaggcgttccgagcggcggcggaggtgagcgcacggacgagcgggagggacccttc
tccggcctgatgcgacccggcctgtttggagttccaatctcgtaccacctcttcccggat
cccgtggtccaatggctctaccagtactggcctcagggccagccagctccgctccctcca
cagctgcagagcctcttccaagaggtgctacaggacataggtgttccttcaggccattgc
tacaagcccttcaccaccttcaccttccaacctgtgagtgcaggcttcccaagactccct
gctggggctgtggtgggcatccctgccagtttcttgggagacctagtgatcaacactaac
catcccgtggtcatacatgggcatacagtggactggcggagcccagcaggcgcccggctg
agagcttccctgaccttgtcccgtgaagcccagaagttcgccttggccagggaagtggtg
tacctggaaagcagtaccactgccgtgcacgccctgctggccccagcttgcctggcaggg
acctgggcactgggcgtgggtgccaagtacaccctggggctccatgcaggccccatgaat
ttacgggctgccttcagcttggtggcagcagtggcaggctttgtggcctacgccttctcc
caggattctctcactcatgccgtggagtcctggctggaccgccgcacggcctccctctct
gcagcctatgcctgtggtggagtggagttctatgagaagcttctgtcgggcaacctggcc
ctgcgcagtctcttgggcaaagacggggagaagctgtatacacccagcgggaacatcgtc
cccagacacttgttccgaatcaaacatttaccctacaccacccgccgggactctgtgctg
cagatgtggagggggatgctcaatccgggccgctcctga

>gi568815596f:119580854_119781786|GENSCAN_predicted_peptide_5|154_aa
MALMLALLFTDPPSPAASVPTSVHNARIVLTMKVKESLQNVEPGGSPNMALTHAILSLCL
VLRGPPLTRLLLTQSEPCSPLEVKGCEDRVLMPNPESITKAAGPKLGPGPEEQTEEQSPR
GEREGAGVHMPHGRQCHCSIITSCVFIDFIVIIK

>gi568815596f:119580854_119781786|GENSCAN_predicted_CDS_5|465_bp
atggcgctgatgctggctctgctcttcactgaccctcctagccctgctgcctcagtcccc
accagtgtccacaatgcaaggattgttttgacgatgaaagtgaaagaaagtttgcaaaat
gtggagcctggcggttcccccaatatggctcttactcatgcaatcctgtctttgtgtctg
gttctcagaggacctccactaacacggttactcctcactcagtcagagccttgctccccg
ctagaggtcaaaggctgtgaggacagggtgctcatgccaaaccctgaaagcattacaaag
gctgcagggcctaagctggggcctgggcctgaggagcaaactgaggagcagagcccacgt
ggagagagggagggagccggcgtccacatgccacacggacggcagtgtcactgctctatc
atcacatcctgcgtgtttatagacttcattgtcatcatcaaatga

>gi568815596f:119580854_119781786|GENSCAN_predicted_peptide_6|92_aa
MFLGSSQQPAASSQGVPMRGPTFLMAASKVNPLGGYTGIHWNPSVALSLRWDTGLSERTG
SVRPVANQRREGCEPFRDSVLPVIAVASTGLA

>gi568815596f:119580854_119781786|GENSCAN_predicted_CDS_6|279_bp
atgttcctgggcagcagccagcagccagcagccagcagccaaggagtccccatgagaggc
cccacattcctgatggcagccagcaaggtgaacccattgggcggttacactgggattcac
tggaacccctctgtggccttgtcactgcgctgggacaccggactttctgaaagaacagga
tcagtcagacctgtggcgaatcagagaagagaaggctgtgagccttttagggacagcgtc
ctccctgtgatcgcggttgccagcacaggcctggcctga

>gi568815596f:119580854_119781786|GENSCAN_predicted_peptide_7|319_aa
XRVLSAGEKKPRGPGAQRRSASSVPLRGATSAPPEQPPPQRSRHDPEPPAPPHAAGQPRA
GAAGEAQFRPLGPRSPERTMLVVGREERKSALRGHTPSPRPQHSNRTWRLRRRRQSVARS
GGGSNRRRSRERRGQNPASLAQGEVAPVGAQRDTQLMIWKAFISPSERDLADASSFSTQY
MEHADTSPAAENNVCQKHAFPERTTIISGMRKQSLFPQLPKFSNMAHKALCALATTHLFS
HIPGLVPLLGSVILNYLLFPEAAGRVMAPGQEGRQSIENGDGAWWTMHVEILLPELPAHN
FWDKLSHQVSSDSCQWVPG

>gi568815596f:119580854_119781786|GENSCAN_predicted_CDS_7|960_bp
nnccgcgtcctctcggctggagaaaaaaagcctcgaggccccggcgcgcagaggagaagc
gcgtcctccgtgccgctccggggggctacctcagcgccccccgagcagccgccgccgcag
cggtcgcgccacgacccggagccgccagcaccacctcatgctgctgggcagccgcgggcc
ggcgccgctggggaggcccaattccggcccctgggacccaggagtcctgagagaacaatg
ttggtggtggggcgcgaggagcggaaaagcgcactgcgcggccacaccccctctcctagg
ccgcagcatagcaaccgaacatggcggctgcgcaggcgccgccagtcagtggccaggagc
ggcggcggcagcaacaggaggcgatctcgcgagaggcgaggccaaaaccctgcctcgcta
gcgcagggagaagtcgcaccagtcggagcgcagagggacacgcagctgatgatctggaag
gccttcatcagcccttctgaaagagatcttgcggatgccagctccttttcaactcagtac
atggaacatgcagacaccagccctgctgctgagaacaatgtctgtcagaaacatgctttc
cctgagaggacaaccattattagtgggatgagaaaacagagtctcttcccgcagctgccc
aagttctccaacatggcacacaaggccctctgtgccttggccaccactcatctgttcagc
cacatccctggtctcgtgccacttctgggctcagtcatcctgaactacctgttgttccct
gaagcggcaggccgggtcatggctccaggccaggagggaagacagtccatagaaaatgga
gatggagcctggtggaccatgcacgtggaaattctgctgccggagctgccagcccataac
ttttgggataaactctcccatcaggtgtccagtgacagctgccagtgggtgccaggctaa