Result of FASTA (omim) for pF1KB7120
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB7120, 294 aa
  1>>>pF1KB7120 294 - 294 aa - 294 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 7.5235+/-0.000481; mu= 5.4463+/- 0.030
 mean_var=165.1256+/-32.067, 0's: 0 Z-trim(113.6): 58  B-trim: 46 in 1/55
 Lambda= 0.099808
 statistics sampled from 22987 (23045) to 22987 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.621), E-opt: 0.2 (0.27), width:  16
 Scan time:  6.990

The best scores are:                                      opt bits E(85289)
XP_011534520 (OMIM: 603552,605014) PREDICTED: synt ( 287)  727 116.9 4.8e-26
XP_011534519 (OMIM: 603552,605014) PREDICTED: synt ( 287)  727 116.9 4.8e-26
XP_016866889 (OMIM: 603552,605014) PREDICTED: synt ( 287)  727 116.9 4.8e-26
XP_011534516 (OMIM: 603552,605014) PREDICTED: synt ( 287)  727 116.9 4.8e-26
NP_003755 (OMIM: 603552,605014) syntaxin-11 [Homo  ( 287)  727 116.9 4.8e-26
XP_011534515 (OMIM: 603552,605014) PREDICTED: synt ( 313)  727 116.9 5.1e-26
NP_004594 (OMIM: 186590) syntaxin-1A isoform 1 [Ho ( 288)  467 79.4   9e-15
XP_016878382 (OMIM: 601485,616172) PREDICTED: synt ( 282)  464 79.0 1.2e-14
NP_443106 (OMIM: 601485,616172) syntaxin-1B [Homo  ( 288)  464 79.0 1.2e-14
NP_001971 (OMIM: 132350) syntaxin-2 isoform 1 [Hom ( 287)  450 77.0 4.9e-14
XP_016874470 (OMIM: 132350) PREDICTED: syntaxin-2  ( 317)  450 77.0 5.3e-14
XP_016874469 (OMIM: 132350) PREDICTED: syntaxin-2  ( 319)  450 77.0 5.3e-14
XP_005253614 (OMIM: 132350) PREDICTED: syntaxin-2  ( 277)  447 76.5 6.4e-14
NP_919337 (OMIM: 132350) syntaxin-2 isoform 2 [Hom ( 288)  447 76.5 6.6e-14
XP_016874471 (OMIM: 132350) PREDICTED: syntaxin-2  ( 309)  447 76.6 6.9e-14
XP_016874468 (OMIM: 132350) PREDICTED: syntaxin-2  ( 320)  447 76.6 7.1e-14
XP_016874467 (OMIM: 132350) PREDICTED: syntaxin-2  ( 320)  447 76.6 7.1e-14
XP_016873681 (OMIM: 600876) PREDICTED: syntaxin-3  ( 279)  441 75.7 1.2e-13
XP_016873682 (OMIM: 600876) PREDICTED: syntaxin-3  ( 279)  441 75.7 1.2e-13
XP_005274255 (OMIM: 600876) PREDICTED: syntaxin-3  ( 287)  441 75.7 1.2e-13
XP_016874472 (OMIM: 132350) PREDICTED: syntaxin-2  ( 260)  433 74.5 2.5e-13
XP_016873683 (OMIM: 600876) PREDICTED: syntaxin-3  ( 269)  429 73.9 3.8e-13
NP_001171511 (OMIM: 600876) syntaxin-3 isoform 2 [ ( 277)  429 73.9 3.9e-13
XP_016873679 (OMIM: 600876) PREDICTED: syntaxin-3  ( 281)  429 73.9 3.9e-13
XP_016873680 (OMIM: 600876) PREDICTED: syntaxin-3  ( 281)  429 73.9 3.9e-13
XP_016873677 (OMIM: 600876) PREDICTED: syntaxin-3  ( 281)  429 73.9 3.9e-13
XP_016873678 (OMIM: 600876) PREDICTED: syntaxin-3  ( 281)  429 73.9 3.9e-13
XP_005274252 (OMIM: 600876) PREDICTED: syntaxin-3  ( 289)  429 73.9   4e-13
NP_004168 (OMIM: 600876) syntaxin-3 isoform 1 [Hom ( 289)  429 73.9   4e-13
NP_001159375 (OMIM: 186590) syntaxin-1A isoform 2  ( 251)  395 69.0 1.1e-11
XP_011543523 (OMIM: 600876) PREDICTED: syntaxin-3  ( 192)  392 68.5 1.2e-11
XP_016868056 (OMIM: 186590) PREDICTED: syntaxin-1A ( 329)  395 69.1 1.3e-11
NP_004595 (OMIM: 186591) syntaxin-4 isoform 3 [Hom ( 297)  390 68.3   2e-11
XP_016874474 (OMIM: 132350) PREDICTED: syntaxin-2  ( 213)  383 67.2 3.1e-11
XP_016874473 (OMIM: 132350) PREDICTED: syntaxin-2  ( 214)  380 66.8 4.2e-11
XP_005255578 (OMIM: 186591) PREDICTED: syntaxin-4  ( 293)  366 64.9 2.2e-10
NP_001259025 (OMIM: 186591) syntaxin-4 isoform 2 [ ( 295)  366 64.9 2.2e-10
XP_016873684 (OMIM: 600876) PREDICTED: syntaxin-3  ( 244)  353 62.9 6.9e-10
XP_005274257 (OMIM: 600876) PREDICTED: syntaxin-3  ( 252)  353 63.0 7.1e-10
NP_001259024 (OMIM: 186591) syntaxin-4 isoform 1 [ ( 219)  319 58.0 1.9e-08
XP_016873685 (OMIM: 600876) PREDICTED: syntaxin-3  ( 155)  316 57.5   2e-08
XP_011544227 (OMIM: 186591) PREDICTED: syntaxin-4  ( 154)  250 47.9 1.4e-05
XP_011534480 (OMIM: 603217) PREDICTED: syntaxin-7  ( 239)  199 40.8  0.0032
NP_001313509 (OMIM: 603217) syntaxin-7 isoform b [ ( 239)  199 40.8  0.0032
NP_803173 (OMIM: 606892) syntaxin-12 [Homo sapiens ( 276)  194 40.1  0.0059


>>XP_011534520 (OMIM: 603552,605014) PREDICTED: syntaxin  (287 aa)
 initn: 675 init1: 579 opt: 727  Z-score: 588.6  bits: 116.9 E(85289): 4.8e-26
Smith-Waterman score: 727; 37.1% identity (76.3% similar) in 291 aa overlap (1-290:1-285)

               10        20        30        40        50        60
pF1KB7 MKDRLQELKQRTKEIELSRDSHVSTTETEEQGVFLQQAVIYEREPVAERHLHEIQKLQES
       ::::: ::      ..::..   .  . ...    .. ...: . . :   ..:. .:. 
XP_011 MKDRLAEL------LDLSKQYDQQFPDGDDEFDSPHEDIVFETDHILESLYRDIRDIQDE
                     10        20        30        40        50    

               70        80        90        100       110         
pF1KB7 INNLADNVQKFGQQQKSLVASMRRFSLLKRES-TITKEIKIQAEYINRSLNDLVKEVKKS
        . :. .:...:.:.  ...::::.: .::.. .:.: :: ..: :. .:  . .  . .
XP_011 NQLLVADVKRLGKQNARFLTSMRRLSSIKRDTNSIAKAIKARGEVIHCKLRAMKELSEAA
           60        70        80        90       100       110    

     120       130       140       150       160       170         
pF1KB7 EVENGPSSVVTRILKSQHAAMFRHFQQIMFIYNDTIAAKQEKCKTFILRQLEVAGKEMSE
       :...:: :.:.:: ..:. :.   ::. :  ::..   ....::  : ::::. :::.: 
XP_011 EAQHGPHSAVARISRAQYNALTLTFQRAMHDYNQAEMKQRDNCKIRIQRQLEIMGKEVSG
          120       130       140       150       160       170    

     180       190       200       210       220       230         
pF1KB7 EDVNDMLHQGKWEVFNESLLTEINITKAQLSEIEQRHKELVNLENQIKDLRDLFIQISLL
       ....::..::::.::.:.::.... ..: :.:::.::.::. ::..:.:...::.:...:
XP_011 DQIEDMFEQGKWDVFSENLLADVKGARAALNEIESRHRELLRLESRIRDVHELFLQMAVL
          180       190       200       210       220       230    

     240       250       260       270       280       290    
pF1KB7 VEEQGESINNIEMTVNSTKEYVNNTKEKFGLAVKYKKRNPCRVLCCWCCPCCSSK
       ::.:....: ::..:..: .:....: .   ::.:...::::.:::.::::    
XP_011 VEKQADTLNVIELNVQKTVDYTGQAKAQVRKAVQYEEKNPCRTLCCFCCPCLK  
          240       250       260       270       280         

>>XP_011534519 (OMIM: 603552,605014) PREDICTED: syntaxin  (287 aa)
 initn: 675 init1: 579 opt: 727  Z-score: 588.6  bits: 116.9 E(85289): 4.8e-26
Smith-Waterman score: 727; 37.1% identity (76.3% similar) in 291 aa overlap (1-290:1-285)

               10        20        30        40        50        60
pF1KB7 MKDRLQELKQRTKEIELSRDSHVSTTETEEQGVFLQQAVIYEREPVAERHLHEIQKLQES
       ::::: ::      ..::..   .  . ...    .. ...: . . :   ..:. .:. 
XP_011 MKDRLAEL------LDLSKQYDQQFPDGDDEFDSPHEDIVFETDHILESLYRDIRDIQDE
                     10        20        30        40        50    

               70        80        90        100       110         
pF1KB7 INNLADNVQKFGQQQKSLVASMRRFSLLKRES-TITKEIKIQAEYINRSLNDLVKEVKKS
        . :. .:...:.:.  ...::::.: .::.. .:.: :: ..: :. .:  . .  . .
XP_011 NQLLVADVKRLGKQNARFLTSMRRLSSIKRDTNSIAKAIKARGEVIHCKLRAMKELSEAA
           60        70        80        90       100       110    

     120       130       140       150       160       170         
pF1KB7 EVENGPSSVVTRILKSQHAAMFRHFQQIMFIYNDTIAAKQEKCKTFILRQLEVAGKEMSE
       :...:: :.:.:: ..:. :.   ::. :  ::..   ....::  : ::::. :::.: 
XP_011 EAQHGPHSAVARISRAQYNALTLTFQRAMHDYNQAEMKQRDNCKIRIQRQLEIMGKEVSG
          120       130       140       150       160       170    

     180       190       200       210       220       230         
pF1KB7 EDVNDMLHQGKWEVFNESLLTEINITKAQLSEIEQRHKELVNLENQIKDLRDLFIQISLL
       ....::..::::.::.:.::.... ..: :.:::.::.::. ::..:.:...::.:...:
XP_011 DQIEDMFEQGKWDVFSENLLADVKGARAALNEIESRHRELLRLESRIRDVHELFLQMAVL
          180       190       200       210       220       230    

     240       250       260       270       280       290    
pF1KB7 VEEQGESINNIEMTVNSTKEYVNNTKEKFGLAVKYKKRNPCRVLCCWCCPCCSSK
       ::.:....: ::..:..: .:....: .   ::.:...::::.:::.::::    
XP_011 VEKQADTLNVIELNVQKTVDYTGQAKAQVRKAVQYEEKNPCRTLCCFCCPCLK  
          240       250       260       270       280         

>>XP_016866889 (OMIM: 603552,605014) PREDICTED: syntaxin  (287 aa)
 initn: 675 init1: 579 opt: 727  Z-score: 588.6  bits: 116.9 E(85289): 4.8e-26
Smith-Waterman score: 727; 37.1% identity (76.3% similar) in 291 aa overlap (1-290:1-285)

               10        20        30        40        50        60
pF1KB7 MKDRLQELKQRTKEIELSRDSHVSTTETEEQGVFLQQAVIYEREPVAERHLHEIQKLQES
       ::::: ::      ..::..   .  . ...    .. ...: . . :   ..:. .:. 
XP_016 MKDRLAEL------LDLSKQYDQQFPDGDDEFDSPHEDIVFETDHILESLYRDIRDIQDE
                     10        20        30        40        50    

               70        80        90        100       110         
pF1KB7 INNLADNVQKFGQQQKSLVASMRRFSLLKRES-TITKEIKIQAEYINRSLNDLVKEVKKS
        . :. .:...:.:.  ...::::.: .::.. .:.: :: ..: :. .:  . .  . .
XP_016 NQLLVADVKRLGKQNARFLTSMRRLSSIKRDTNSIAKAIKARGEVIHCKLRAMKELSEAA
           60        70        80        90       100       110    

     120       130       140       150       160       170         
pF1KB7 EVENGPSSVVTRILKSQHAAMFRHFQQIMFIYNDTIAAKQEKCKTFILRQLEVAGKEMSE
       :...:: :.:.:: ..:. :.   ::. :  ::..   ....::  : ::::. :::.: 
XP_016 EAQHGPHSAVARISRAQYNALTLTFQRAMHDYNQAEMKQRDNCKIRIQRQLEIMGKEVSG
          120       130       140       150       160       170    

     180       190       200       210       220       230         
pF1KB7 EDVNDMLHQGKWEVFNESLLTEINITKAQLSEIEQRHKELVNLENQIKDLRDLFIQISLL
       ....::..::::.::.:.::.... ..: :.:::.::.::. ::..:.:...::.:...:
XP_016 DQIEDMFEQGKWDVFSENLLADVKGARAALNEIESRHRELLRLESRIRDVHELFLQMAVL
          180       190       200       210       220       230    

     240       250       260       270       280       290    
pF1KB7 VEEQGESINNIEMTVNSTKEYVNNTKEKFGLAVKYKKRNPCRVLCCWCCPCCSSK
       ::.:....: ::..:..: .:....: .   ::.:...::::.:::.::::    
XP_016 VEKQADTLNVIELNVQKTVDYTGQAKAQVRKAVQYEEKNPCRTLCCFCCPCLK  
          240       250       260       270       280         

>>XP_011534516 (OMIM: 603552,605014) PREDICTED: syntaxin  (287 aa)
 initn: 675 init1: 579 opt: 727  Z-score: 588.6  bits: 116.9 E(85289): 4.8e-26
Smith-Waterman score: 727; 37.1% identity (76.3% similar) in 291 aa overlap (1-290:1-285)

               10        20        30        40        50        60
pF1KB7 MKDRLQELKQRTKEIELSRDSHVSTTETEEQGVFLQQAVIYEREPVAERHLHEIQKLQES
       ::::: ::      ..::..   .  . ...    .. ...: . . :   ..:. .:. 
XP_011 MKDRLAEL------LDLSKQYDQQFPDGDDEFDSPHEDIVFETDHILESLYRDIRDIQDE
                     10        20        30        40        50    

               70        80        90        100       110         
pF1KB7 INNLADNVQKFGQQQKSLVASMRRFSLLKRES-TITKEIKIQAEYINRSLNDLVKEVKKS
        . :. .:...:.:.  ...::::.: .::.. .:.: :: ..: :. .:  . .  . .
XP_011 NQLLVADVKRLGKQNARFLTSMRRLSSIKRDTNSIAKAIKARGEVIHCKLRAMKELSEAA
           60        70        80        90       100       110    

     120       130       140       150       160       170         
pF1KB7 EVENGPSSVVTRILKSQHAAMFRHFQQIMFIYNDTIAAKQEKCKTFILRQLEVAGKEMSE
       :...:: :.:.:: ..:. :.   ::. :  ::..   ....::  : ::::. :::.: 
XP_011 EAQHGPHSAVARISRAQYNALTLTFQRAMHDYNQAEMKQRDNCKIRIQRQLEIMGKEVSG
          120       130       140       150       160       170    

     180       190       200       210       220       230         
pF1KB7 EDVNDMLHQGKWEVFNESLLTEINITKAQLSEIEQRHKELVNLENQIKDLRDLFIQISLL
       ....::..::::.::.:.::.... ..: :.:::.::.::. ::..:.:...::.:...:
XP_011 DQIEDMFEQGKWDVFSENLLADVKGARAALNEIESRHRELLRLESRIRDVHELFLQMAVL
          180       190       200       210       220       230    

     240       250       260       270       280       290    
pF1KB7 VEEQGESINNIEMTVNSTKEYVNNTKEKFGLAVKYKKRNPCRVLCCWCCPCCSSK
       ::.:....: ::..:..: .:....: .   ::.:...::::.:::.::::    
XP_011 VEKQADTLNVIELNVQKTVDYTGQAKAQVRKAVQYEEKNPCRTLCCFCCPCLK  
          240       250       260       270       280         

>>NP_003755 (OMIM: 603552,605014) syntaxin-11 [Homo sapi  (287 aa)
 initn: 675 init1: 579 opt: 727  Z-score: 588.6  bits: 116.9 E(85289): 4.8e-26
Smith-Waterman score: 727; 37.1% identity (76.3% similar) in 291 aa overlap (1-290:1-285)

               10        20        30        40        50        60
pF1KB7 MKDRLQELKQRTKEIELSRDSHVSTTETEEQGVFLQQAVIYEREPVAERHLHEIQKLQES
       ::::: ::      ..::..   .  . ...    .. ...: . . :   ..:. .:. 
NP_003 MKDRLAEL------LDLSKQYDQQFPDGDDEFDSPHEDIVFETDHILESLYRDIRDIQDE
                     10        20        30        40        50    

               70        80        90        100       110         
pF1KB7 INNLADNVQKFGQQQKSLVASMRRFSLLKRES-TITKEIKIQAEYINRSLNDLVKEVKKS
        . :. .:...:.:.  ...::::.: .::.. .:.: :: ..: :. .:  . .  . .
NP_003 NQLLVADVKRLGKQNARFLTSMRRLSSIKRDTNSIAKAIKARGEVIHCKLRAMKELSEAA
           60        70        80        90       100       110    

     120       130       140       150       160       170         
pF1KB7 EVENGPSSVVTRILKSQHAAMFRHFQQIMFIYNDTIAAKQEKCKTFILRQLEVAGKEMSE
       :...:: :.:.:: ..:. :.   ::. :  ::..   ....::  : ::::. :::.: 
NP_003 EAQHGPHSAVARISRAQYNALTLTFQRAMHDYNQAEMKQRDNCKIRIQRQLEIMGKEVSG
          120       130       140       150       160       170    

     180       190       200       210       220       230         
pF1KB7 EDVNDMLHQGKWEVFNESLLTEINITKAQLSEIEQRHKELVNLENQIKDLRDLFIQISLL
       ....::..::::.::.:.::.... ..: :.:::.::.::. ::..:.:...::.:...:
NP_003 DQIEDMFEQGKWDVFSENLLADVKGARAALNEIESRHRELLRLESRIRDVHELFLQMAVL
          180       190       200       210       220       230    

     240       250       260       270       280       290    
pF1KB7 VEEQGESINNIEMTVNSTKEYVNNTKEKFGLAVKYKKRNPCRVLCCWCCPCCSSK
       ::.:....: ::..:..: .:....: .   ::.:...::::.:::.::::    
NP_003 VEKQADTLNVIELNVQKTVDYTGQAKAQVRKAVQYEEKNPCRTLCCFCCPCLK  
          240       250       260       270       280         

>>XP_011534515 (OMIM: 603552,605014) PREDICTED: syntaxin  (313 aa)
 initn: 675 init1: 579 opt: 727  Z-score: 588.1  bits: 116.9 E(85289): 5.1e-26
Smith-Waterman score: 727; 37.1% identity (76.3% similar) in 291 aa overlap (1-290:27-311)

                                         10        20        30    
pF1KB7                           MKDRLQELKQRTKEIELSRDSHVSTTETEEQGVF
                                 ::::: ::      ..::..   .  . ...   
XP_011 MEQPQGDEMDEGEEEEKKARSQPQSKMKDRLAEL------LDLSKQYDQQFPDGDDEFDS
               10        20        30              40        50    

           40        50        60        70        80        90    
pF1KB7 LQQAVIYEREPVAERHLHEIQKLQESINNLADNVQKFGQQQKSLVASMRRFSLLKRES-T
        .. ...: . . :   ..:. .:.  . :. .:...:.:.  ...::::.: .::.. .
XP_011 PHEDIVFETDHILESLYRDIRDIQDENQLLVADVKRLGKQNARFLTSMRRLSSIKRDTNS
           60        70        80        90       100       110    

           100       110       120       130       140       150   
pF1KB7 ITKEIKIQAEYINRSLNDLVKEVKKSEVENGPSSVVTRILKSQHAAMFRHFQQIMFIYND
       :.: :: ..: :. .:  . .  . .:...:: :.:.:: ..:. :.   ::. :  ::.
XP_011 IAKAIKARGEVIHCKLRAMKELSEAAEAQHGPHSAVARISRAQYNALTLTFQRAMHDYNQ
          120       130       140       150       160       170    

           160       170       180       190       200       210   
pF1KB7 TIAAKQEKCKTFILRQLEVAGKEMSEEDVNDMLHQGKWEVFNESLLTEINITKAQLSEIE
       .   ....::  : ::::. :::.: ....::..::::.::.:.::.... ..: :.:::
XP_011 AEMKQRDNCKIRIQRQLEIMGKEVSGDQIEDMFEQGKWDVFSENLLADVKGARAALNEIE
          180       190       200       210       220       230    

           220       230       240       250       260       270   
pF1KB7 QRHKELVNLENQIKDLRDLFIQISLLVEEQGESINNIEMTVNSTKEYVNNTKEKFGLAVK
       .::.::. ::..:.:...::.:...:::.:....: ::..:..: .:....: .   ::.
XP_011 SRHRELLRLESRIRDVHELFLQMAVLVEKQADTLNVIELNVQKTVDYTGQAKAQVRKAVQ
          240       250       260       270       280       290    

           280       290    
pF1KB7 YKKRNPCRVLCCWCCPCCSSK
       :...::::.:::.::::    
XP_011 YEEKNPCRTLCCFCCPCLK  
          300       310     

>>NP_004594 (OMIM: 186590) syntaxin-1A isoform 1 [Homo s  (288 aa)
 initn: 454 init1: 390 opt: 467  Z-score: 386.2  bits: 79.4 E(85289): 9e-15
Smith-Waterman score: 481; 31.1% identity (67.5% similar) in 283 aa overlap (8-288:1-272)

               10        20        30        40        50        60
pF1KB7 MKDRLQELKQRTKEIELSRDSHVSTTETEEQGVFLQQAVIYEREPVAERHLHEIQKLQES
              .:.::.:.. ..::       ... :    ::  .:.   .. ........  
NP_004        MKDRTQELRTAKDSD------DDDDV----AVTVDRDRFMDEFFEQVEEIRGF
                      10              20            30        40   

               70        80        90        100       110         
pF1KB7 INNLADNVQKFGQQQKSLVASMRRFSLLKRE-STITKEIKIQAEYINRSLNDLVKEVKKS
       :...:.::..  .......::       :.:   . ..::  :. .  .:... . ... 
NP_004 IDKIAENVEEVKRKHSAILASPNPDEKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQE
            50        60        70        80        90       100   

     120       130       140       150       160       170         
pF1KB7 EVENGPSSVVTRILKSQHAAMFRHFQQIMFIYNDTIAAKQEKCKTFILRQLEVAGKEMSE
       :  :  ::.  :: :.::... :.: ..:  :: : .  .:.::  : ::::..:.  . 
NP_004 EGLNR-SSADLRIRKTQHSTLSRKFVEVMSEYNATQSDYRERCKGRIQRQLEITGRTTTS
            110       120       130       140       150       160  

     180       190       200       210       220       230         
pF1KB7 EDVNDMLHQGKWEVFNESLLTEINITKAQLSEIEQRHKELVNLENQIKDLRDLFIQISLL
       :...:::..:.  .:  ... . .:.:  ::::: ::.:...:::.:..:.:.:.....:
NP_004 EELEDMLESGNPAIFASGIIMDSSISKQALSEIETRHSEIIKLENSIRELHDMFMDMAML
            170       180       190       200       210       220  

     240       250       260       270        280       290        
pF1KB7 VEEQGESINNIEMTVNSTKEYVNNTKEKFGLAVKYK-KRNPCRVLCCWCCPCCSSK    
       :: ::: :. ::..:. . .::. .      ::::. :    ...   ::          
NP_004 VESQGEMIDRIEYNVEHAVDYVERAVSDTKKAVKYQSKARRKKIMIIICCVILGIVIAST
            230       240       250       260       270       280  

NP_004 VGGIFA
             

>>XP_016878382 (OMIM: 601485,616172) PREDICTED: syntaxin  (282 aa)
 initn: 419 init1: 389 opt: 464  Z-score: 384.0  bits: 79.0 E(85289): 1.2e-14
Smith-Waterman score: 464; 30.6% identity (69.4% similar) in 255 aa overlap (36-288:12-265)

          10        20        30        40        50        60     
pF1KB7 QELKQRTKEIELSRDSHVSTTETEEQGVFLQQAVIYEREPVAERHLHEIQKLQESINNLA
                                     ...:  .:.   .. ........  :..:.
XP_016                    MEPRAKDSDDEEEVVHVDRDHFMDEFFEQVEEIRGCIEKLS
                                  10        20        30        40 

          70        80        90        100       110       120    
pF1KB7 DNVQKFGQQQKSLVASMRRFSLLKRE-STITKEIKIQAEYINRSLNDLVKEVKKSEVENG
       ..:..  .:.....:.       :.:   .: .::  :. .  .:. . . ... :  : 
XP_016 EDVEQVKKQHSAILAAPNPDEKTKQELEDLTADIKKTANKVRSKLKAIEQSIEQEEGLNR
              50        60        70        80        90       100 

          130       140       150       160       170       180    
pF1KB7 PSSVVTRILKSQHAAMFRHFQQIMFIYNDTIAAKQEKCKTFILRQLEVAGKEMSEEDVND
        ::.  :: :.::... :.: ..:  :: : .  ...::  : ::::..:.  ..:...:
XP_016 -SSADLRIRKTQHSTLSRKFVEVMTEYNATQSKYRDRCKDRIQRQLEITGRTTTNEELED
              110       120       130       140       150       160

          190       200       210       220       230       240    
pF1KB7 MLHQGKWEVFNESLLTEINITKAQLSEIEQRHKELVNLENQIKDLRDLFIQISLLVEEQG
       ::..::  .:....  . ..::  :.::: ::.:...::..:..:.:.:.....::: ::
XP_016 MLESGKLAIFTDDIKMDSQMTKQALNEIETRHNEIIKLETSIRELHDMFVDMAMLVESQG
              170       180       190       200       210       220

          250       260       270        280       290             
pF1KB7 ESINNIEMTVNSTKEYVNNTKEKFGLAVKYK-KRNPCRVLCCWCCPCCSSK         
       : :. ::..:. . .::. .      ::::. :    ...   ::               
XP_016 EMIDRIEYNVEHSVDYVERAVSDTKKAVKYQSKARRKKIMIIICCVVLGVVLASSIGGTL
              230       240       250       260       270       280

XP_016 GL
         

>>NP_443106 (OMIM: 601485,616172) syntaxin-1B [Homo sapi  (288 aa)
 initn: 453 init1: 389 opt: 464  Z-score: 383.9  bits: 79.0 E(85289): 1.2e-14
Smith-Waterman score: 479; 30.4% identity (67.8% similar) in 283 aa overlap (8-288:1-271)

               10        20        30        40        50        60
pF1KB7 MKDRLQELKQRTKEIELSRDSHVSTTETEEQGVFLQQAVIYEREPVAERHLHEIQKLQES
              .:.::.:.. ..::     . ::. : .      .:.   .. ........  
NP_443        MKDRTQELRSAKDS-----DDEEEVVHV------DRDHFMDEFFEQVEEIRGC
                      10             20              30        40  

               70        80        90        100       110         
pF1KB7 INNLADNVQKFGQQQKSLVASMRRFSLLKRE-STITKEIKIQAEYINRSLNDLVKEVKKS
       :..:...:..  .:.....:.       :.:   .: .::  :. .  .:. . . ... 
NP_443 IEKLSEDVEQVKKQHSAILAAPNPDEKTKQELEDLTADIKKTANKVRSKLKAIEQSIEQE
             50        60        70        80        90       100  

     120       130       140       150       160       170         
pF1KB7 EVENGPSSVVTRILKSQHAAMFRHFQQIMFIYNDTIAAKQEKCKTFILRQLEVAGKEMSE
       :  :  ::.  :: :.::... :.: ..:  :: : .  ...::  : ::::..:.  ..
NP_443 EGLNR-SSADLRIRKTQHSTLSRKFVEVMTEYNATQSKYRDRCKDRIQRQLEITGRTTTN
             110       120       130       140       150       160 

     180       190       200       210       220       230         
pF1KB7 EDVNDMLHQGKWEVFNESLLTEINITKAQLSEIEQRHKELVNLENQIKDLRDLFIQISLL
       :...:::..::  .:....  . ..::  :.::: ::.:...::..:..:.:.:.....:
NP_443 EELEDMLESGKLAIFTDDIKMDSQMTKQALNEIETRHNEIIKLETSIRELHDMFVDMAML
             170       180       190       200       210       220 

     240       250       260       270        280       290        
pF1KB7 VEEQGESINNIEMTVNSTKEYVNNTKEKFGLAVKYK-KRNPCRVLCCWCCPCCSSK    
       :: ::: :. ::..:. . .::. .      ::::. :    ...   ::          
NP_443 VESQGEMIDRIEYNVEHSVDYVERAVSDTKKAVKYQSKARRKKIMIIICCVVLGVVLASS
             230       240       250       260       270       280 

NP_443 IGGTLGL
              

>>NP_001971 (OMIM: 132350) syntaxin-2 isoform 1 [Homo sa  (287 aa)
 initn: 422 init1: 377 opt: 450  Z-score: 373.0  bits: 77.0 E(85289): 4.9e-14
Smith-Waterman score: 450; 29.5% identity (72.1% similar) in 251 aa overlap (39-288:21-270)

       10        20        30        40        50        60        
pF1KB7 KQRTKEIELSRDSHVSTTETEEQGVFLQQAVIYEREPVAERHLHEIQKLQESINNLADNV
                                     :. :..   .  .:.......::..... :
NP_001           MRDRLPDLTACRKNDDGDTVVVVEKDHFMDDFFHQVEEIRNSIDKITQYV
                         10        20        30        40        50

       70        80        90        100       110       120       
pF1KB7 QKFGQQQKSLVASMRRFSLLKRE-STITKEIKIQAEYINRSLNDLVKEVKKSEVENGPSS
       ..  .... ....    . .:.:   ..::::  :. :  .:. . .   ..:  :  .:
NP_001 EEVKKNHSIILSAPNPEGKIKEELEDLNKEIKKTANKIRAKLKAIEQSFDQDESGNR-TS
               60        70        80        90       100          

       130       140       150       160       170       180       
pF1KB7 VVTRILKSQHAAMFRHFQQIMFIYNDTIAAKQEKCKTFILRQLEVAGKEMSEEDVNDMLH
       :  :: ..::... :.: . :  ::.. .  .:. :  : ::::..:.  .......::.
NP_001 VDLRIRRTQHSVLSRKFVEAMAEYNEAQTLFRERSKGRIQRQLEITGRTTTDDELEEMLE
     110       120       130       140       150       160         

       190       200       210       220       230       240       
pF1KB7 QGKWEVFNESLLTEINITKAQLSEIEQRHKELVNLENQIKDLRDLFIQISLLVEEQGESI
       .::  .:. ..... .::.  :.:::.:::....::..:..:...:......:: ::: :
NP_001 SGKPSIFTSDIISDSQITRQALNEIESRHKDIMKLETSIRELHEMFMDMAMFVETQGEMI
     170       180       190       200       210       220         

       250       260       270       280       290               
pF1KB7 NNIEMTVNSTKEYVNNTKEKFGLAVKYKKRNPCRVLCCWCCPCCSSK           
       :::: .: .. .::...::.   :.::...   ...    :                 
NP_001 NNIERNVMNATDYVEHAKEETKKAIKYQSKARRKLMFIIICVIVLLVILGIILATTLS
     230       240       250       260       270       280       




294 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 04:55:22 2016 done: Fri Nov  4 04:55:23 2016
 Total Scan time:  6.990 Total Display time:  0.010

Function used was FASTA [36.3.4 Apr, 2011]
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