GENSCAN 1.0	Date run:  4-Nov-116	Time: 04:40:28

Sequence gi568815576r:30563440_30764003 : 200564 bp : 49.25% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.16 PlyA -   2877   2872    6                               1.05
 1.15 Term -  13690  13607   84  1  0  140   48   155 0.751  14.35
 1.14 Intr -  15559  15398  162  1  0  100  105   325 0.940  35.57
 1.13 Intr -  15864  15698  167  1  2   56   97   331 0.999  30.48
 1.12 Intr -  16496  16312  185  1  2   81   99   244 0.970  24.23
 1.11 Intr -  16739  16614  126  1  0   86   96   131 0.999  13.49
 1.10 Intr -  17262  17132  131  0  2   61   91   211 0.996  18.19
 1.09 Intr -  17662  17573   90  1  0   88   72   123 0.997  10.89
 1.08 Intr -  17969  17895   75  2  0  114   78    75 0.971   8.81
 1.07 Intr -  18205  18089  117  1  0   96   97   244 0.999  26.76
 1.06 Intr -  21015  20926   90  0  0  121   86   106 0.986  13.89
 1.05 Intr -  21278  21107  172  1  1   67  105   305 0.986  30.05
 1.04 Intr -  23956  23847  110  1  2  123  101   244 0.994  28.28
 1.03 Intr -  24735  24582  154  2  1  107  100   170 0.999  20.17
 1.02 Intr -  25831  25752   80  1  2   55   36   144 0.981   4.25
 1.01 Init -  34917  34897   21  0  0   60  113    10 0.295   0.53
 1.00 Prom -  38239  38200   40                              -6.06

 2.00 Prom +  40257  40296   40                              -6.16
 2.01 Init +  43893  43956   64  2  1   88   89    85 0.978   7.96
 2.02 Intr +  47432  47624  193  0  1   92   34   150 0.984   8.55
 2.03 Intr +  49434  49603  170  0  2   49   85   208 0.841  16.19
 2.04 Intr +  50910  51062  153  1  0  124   92   169 0.999  20.94
 2.05 Intr +  51832  52034  203  2  2   93   75   189 0.860  17.10
 2.06 Intr +  52162  52348  187  0  1   80   53   110 0.993   5.96
 2.07 Intr +  53891  54056  166  0  1   69   57   180 0.391  12.02
 2.08 Intr +  59529  59644  116  0  2  106  113    56 0.778   9.99
 2.09 Intr +  72998  73630  633  0  0   46  106   737 0.734  63.41
 2.10 Term +  83159  83592  434  0  2  103   53   485 0.997  41.96
 2.11 PlyA +  87061  87066    6                               1.05

 3.07 PlyA -  87760  87755    6                               1.05
 3.06 Term -  88186  88175   12  1  0  105   32     9 0.239  -4.80
 3.05 Intr -  91239  90834  406  2  1   36  -19   360 0.544  14.45
 3.04 Intr - 100536 100002  535  1  1   81   48   806 0.003  67.88
 3.03 Intr - 115705 115592  114  2  0   24   53   133 0.625   3.82
 3.02 Intr - 116189 115994  196  2  1   67   54   141 0.763   7.59
 3.01 Init - 120349 120344    6  1  0   71  110     0 0.516   1.49
 3.00 Prom - 125210 125171   40                              -2.16

 4.05 PlyA - 125407 125402    6                               1.05
 4.04 Term - 131258 131121  138  2  0   98   45   116 0.926   6.26
 4.03 Intr - 131926 131437  490  0  1   40    3   433 0.507  23.01
 4.02 Intr - 132212 132009  204  1  0   42   64   128 0.765   4.12
 4.01 Init - 147017 146953   65  2  2   90   80    94 0.971   9.42
 4.00 Prom - 147162 147123   40                              -5.86

 5.04 PlyA - 148507 148502    6                               1.05
 5.03 Term - 153587 153412  176  0  2   40   49   153 0.964   4.52
 5.02 Intr - 155008 154982   27  2  0  128  116    -4 0.893   4.49
 5.01 Init - 158151 158145    7  0  1   73   97     5 0.590   0.72
 5.00 Prom - 160962 160923   40                              -6.16

 6.00 Prom + 163979 164018   40                              -4.16
 6.01 Init + 167810 167895   86  1  2   82   76    49 0.690   3.41
 6.02 Intr + 177722 178063  342  2  0   86  100   261 0.457  21.65
 6.03 Intr + 180284 180396  113  2  2   91   78    96 0.683   8.92
 6.04 Intr + 189665 189714   50  0  2   31   78    34 0.045  -4.90
 6.05 Intr + 193426 193585  160  0  1  110   32    91 0.120   5.26
 6.06 Intr + 199162 199241   80  2  2   97   66    43 0.066   2.27

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl + 104164 104796  633  0  0   69   37   225 0.922  11.69


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815576r:30563440_30764003|GENSCAN_predicted_peptide_1|587_aa
MKLPTFKYERGSATNYITRNKARKKLQLSLADFRRLCILKGIYPHEPKHKKKVNKGSTAA
RTFYLIKDIRFLLHEPIVNKFREYKVFVRKLRKAYGKSEWNTVERLKDNKPNYKLDHIIK
ERYPTFIDALRDLDDALSMCFLFSTFPRTGKCHVQTIQLCRRLTVEFMHYIIAARALRKV
FLSIKGIYYQAEVLGQPIVWITPYAFSHDHPTDVDYRVMATFTEFYTTLLGFVNFRLYQL
LNLHYPPKLEGQAQAEAKAGEGTYALDSESCMEKLAALSASLARVVVPATEEEAEVDEFP
TDGEMSAQEEDRRKELEAQEKHKKLFEGLKFFLNREVPREALAFIIRSFGGEVSWDKSLC
IGATYDVTDSRITHQIVDRPGQQTSVIGRCYVQPQWVFDSVNARLLLPVAEYFSGVQLPP
HLSPFVTEKEGDYVPPEKLKLLALQRGEDPGNLNESEEEEEEDDNNEGDGDEEGENEEEE
EDAEAGSEKEEEARLAALEEQRMEGKKPRVMAGTLKLEDKQRLAQEEESEAKRLAIMMMK
KREKYLYQKIMFGKRRKIREANKLAEKRKAHDEAVRSEKKAKKARPE

>gi568815576r:30563440_30764003|GENSCAN_predicted_CDS_1|1764_bp
atgaagctgccaaccttcaagtatgaacgaggctcggccaccaactacatcacccggaac
aaagcccggaagaagctccagctgagcttggctgactttaggcggctgtgcattctgaag
ggcatttatccccatgaacccaaacacaagaagaaggttaacaagggttctacagcagcc
cgaacgttttaccttatcaaagacatcaggtttctcctccacgaacccattgtcaacaag
ttccgtgaatacaaggtgttcgtccggaagctccggaaggcttatgggaagagcgagtgg
aacactgtagagcgtttaaaggacaataagcccaactacaaactcgaccacatcatcaag
gaacggtatcccacgttcatcgatgccctgcgggacctggacgatgccctctccatgtgc
ttcctgttttccaccttcccgcggactggcaagtgccacgtgcagaccattcagctgtgc
cgccggctcactgtggagttcatgcactacattatcgctgcccgtgccctgcgcaaggtc
ttcctgtccatcaaaggcatttactaccaggccgaggtactggggcagcccatcgtgtgg
atcactccctatgccttctcccatgaccacccgacagacgtggactacagggtcatggcc
accttcaccgagttctacaccacgctgctgggctttgtcaacttccgcctttaccagttg
ctcaacctccactatcccccgaagctcgagggtcaggcccaagcagaggcaaaggccggt
gagggcacctacgcgttggactccgagagttgtatggagaaactggcagccctcagtgcc
agcctggcccgcgtggtggtgcctgccacagaggaggaggccgaggtggatgagtttccc
accgatggggagatgtcagcgcaggaggaagaccgcaggaaggagctggaggcgcaggag
aagcacaagaagctttttgagggcctgaagttcttcctgaaccgagaggtgccccgtgag
gccctggccttcatcatcaggagttttggtggggaagtgtcctgggacaaatctttgtgc
attggggccacctatgacgtcacagactcccgcatcacccatcagattgtcgaccggcct
gggcagcagacctcagtcattggcaggtgctacgtgcagccccagtgggtgtttgactca
gtgaacgccaggctccttctccccgtggcagagtacttctctggggtgcagctgccccca
cacctttcaccctttgtgaccgagaaggaaggagattacgttccacctgagaagctgaag
ctgctggctctgcagcggggagaggacccaggaaacctgaatgagtcagaagaggaggag
gaagaggacgacaacaacgaaggtgatggtgatgaagagggagaaaatgaggaggaggag
gaagatgcagaggctggttcagaaaaggaggaagaggcccggctggcagccctggaagag
cagaggatggaggggaagaagcccagggtgatggcaggcaccttgaagctggaggataag
cagcggctggcccaggaggaggagagtgaggccaagcgcctggccattatgatgatgaag
aagcgggagaagtacctgtaccagaagatcatgtttggcaagaggcgaaaaatccgagag
gccaacaagctggcggagaagcggaaagcccacgatgaggcggtgaggtctgagaagaag
gccaagaaggcaaggccggagtga

>gi568815576r:30563440_30764003|GENSCAN_predicted_peptide_2|772_aa
MRHLGAFLFLLGVLGALTEMCEIPEMDSHLVEKLGQHLLPWMDRLSLEHLNPSIYVGLRL
SSLQAGTKEDLYLHSLKLGYQQCLLGSAFSEDDGDCQGKPSMGQLALYLLALRANCEFVR
GHKGDRLVSQLKWFLEDEKRAIGHDHKGHPHTSYYQYGLGILALCLHQKRVHDSVVDKLL
YAVEPFHQGHHSVAHCMFCPPLQDTAAMAGLAFTCLKRSNFNPGRRQRITMAIRTVREEI
LKAQTPEGHFGNVYSTPLALQFLMTSPMRGAELGTACLKARVALLASLQDGAFQNALMIS
QLLPVLNHKTYIDLIFPDCLAPRVMLEPAAETIPQTQEIISVTLQVLSLLPPYRQSISVL
AGSTVEDVLKKAHELGGFTYETQASLSGPYLTSVMGKAAGEREFWQLLRDPNTPLLQASL
VRMCRCPPEHHDGRMTSAEVGAAAGGAQAAGPPEWPPGSPQALRQPGRARVAMAALVWLL
AGASMSSLNKWIFTVHGFGRPLLLSALHMLVAALACHRGARRPMPGGTRCRVLLLSLTFG
TSMACGNVGLRAVPLDLAQLVTTTTPLFTLALSALLLGRRHHPLQLAAMGPLCLGAACSL
AGEFRTPPTGCGFLLAATCLRGLKSVQQSALLQEERLDAVTLLYATSLPSFCLLAGAALV
LEAGVAPPPTAGDSRLWACILLSCLLSVLYNLASFSLLALTSALTVHVLGNLTVVGNLIL
SRLLFGSRLSALSYVGIALTLSGMFLYHNCEFVASWAARRGLWRRDQPSKGL

>gi568815576r:30563440_30764003|GENSCAN_predicted_CDS_2|2319_bp
atgaggcaccttggggccttcctcttccttctgggggtcctgggggccctcactgagatg
tgtgaaataccagagatggacagccatctggtagagaagttgggccagcacctcttacct
tggatggaccggctttccctggagcacttgaaccccagcatctatgtgggcctacgcctc
tccagtctgcaggctgggaccaaggaagacctctacctgcacagcctcaagcttggttac
cagcagtgcctcctagggtctgccttcagcgaggatgacggtgactgccagggcaagcct
tccatgggccagctggccctctacctgctcgctctcagagccaactgtgagtttgtcagg
ggccacaagggggacaggctggtctcacagctcaaatggttcctggaggatgagaagaga
gccattgggcatgatcacaagggccacccccacactagctactaccagtatggcctgggc
attctggccctgtgtctccaccagaagcgggtccatgacagcgtggtggacaaacttctg
tatgctgtggaacctttccaccagggccaccattctgtggctcattgcatgttctgtccc
ccacttcaagacacagcagccatggcaggcttggcattcacctgtctgaagcgctcaaac
ttcaaccctggtcggagacaacggatcaccatggccatcagaacagtgcgagaggagatc
ttgaaggcccagacccccgagggccactttgggaatgtctacagcaccccattggcatta
cagttcctcatgacttcccccatgcgtggggcagaactgggaacagcatgtctcaaggcg
agggttgctttgctggccagtctgcaggatggagccttccagaatgctctcatgatttcc
cagctgctgcccgttctgaaccacaagacctacattgatctgatcttcccagactgtctg
gcaccacgagtcatgttggaaccagctgctgagaccattcctcagacccaagagatcatc
agtgtcacgctgcaggtgcttagtctcttgccgccgtacagacagtccatctctgttctg
gccgggtccaccgtggaagatgtcctgaagaaggcccatgagttaggaggattcacatat
gaaacacaggcctccttgtcaggcccctacttaacctccgtgatggggaaagcggccgga
gaaagggagttctggcagcttctccgagaccccaacaccccactgttgcaagcctcactg
gtgcggatgtgccgctgcccgccggagcaccatgatggcaggatgacctcagccgaagta
ggagcagcagctggtggtgctcaggcggctgggccccccgagtggccccctggcagccct
caggccctccggcagcctggccgggcccgagtggccatggcagcactggtgtggctgctg
gcgggagccagcatgtcaagcctcaacaagtggatcttcacagtgcacggctttgggcgg
cccctgctgctgtcggccctgcacatgctggtggcagccctggcatgccaccggggggca
cggcgccccatgccaggcggcactcgctgccgagtcctactgctcagtctcacctttggc
acgtccatggcctgcggcaacgtgggcctaagggctgtgcccctggacctggcacaactg
gttactaccaccacacctctgttcaccctggccctgtcggcgctgctgctgggccgccgc
caccacccacttcagttggccgccatgggtccgctctgcctgggggccgcctgcagcctg
gctggagagttccggacaccccctaccggctgtggcttcctgctcgcagccacctgcctc
cgcggactcaagtcggttcagcaaagtgccctgctgcaggaggagaggctggacgcggtg
accctgctttacgccacctcgctgcccagcttctgcctgctggcgggtgcagccctggtg
ctggaggctggcgttgccccaccgcccactgctggcgactctcgcctctgggcctgcatc
ctgctcagctgcctcctgtctgttctctataacctggccagcttctccctgctggccctc
acctctgccctcaccgtccacgtcctgggcaacctcaccgtggtgggcaacctcatcctg
tcccggctgttgtttggcagccgcctcagtgccctcagctacgtgggcatcgcactcact
ctttcaggaatgttcctttaccacaactgcgagttcgtggcctcctgggctgcccgtcgg
gggctgtggcggagggaccagcccagcaagggtctttga

>gi568815576r:30563440_30764003|GENSCAN_predicted_peptide_3|422_aa
MRTSSSPQPGVGSDHPNIPGCPTWGDKDPGEGTLEHVKAEDTLSQDTQERRTSKRSSAGK
LSTGKNQDHEADSDEEEEDKCKKLTSDSECEEQLPEEMKERKTEKIQFRQPSVSGLSQIT
KSLYISNGVAANNKLMLSSNQITMVINVSVEVVNTLYEDIQYMQVPVADSPNSRLCDFFD
PIADHIHSVEMKQGRTLLHCAAGVSRSAALCLAYLMKYHAMSLLDAHTWTKSCRPIIRPN
SGFWEQLIHYEFQLFGKNTVHMVSSPVGMIPDIYEKEVRLMIPLKKLKYLAFLHKWMNSN
PSRGTYHFWAPTTSGSPAASSGGPRGMLPRETKEARPPKTASRCLTASHHPMTKKQVVVP
AALQVVHLKPTRKFAYLGQLDHKVGWKYQTVTATLEEKRKEKAKIHYQNKKQLMGWPGAG
PD

>gi568815576r:30563440_30764003|GENSCAN_predicted_CDS_3|1269_bp
atgaggacttcgtcgtccccacaacctggtgttgggtctgatcaccccaacattcctggc
tgcccaacgtggggcgacaaagaccccggtgaaggaacactagagcatgtgaaagcggag
gacacattgtcacaggacacccaagaacgtcgaacgtctaaaagaagctcggcaggaaag
ctgagcactgggaagaaccaggatcatgaggcagattcagatgaggaagaggaggacaag
tgtaaaaaactaacttcagattctgagtgtgaggaacagctaccggaggagatgaaagaa
aggaaaactgaaaaaattcagttccggcagccctcagtcagcggcctctcgcagataacc
aaaagcctgtatatcagcaatggtgtggccgccaacaacaagctcatgctgtctagcaac
cagatcaccatggtcatcaatgtctcagtggaggtagtgaacaccttgtatgaggatatc
cagtacatgcaggtacctgtggctgactcccctaactcacgtctctgtgacttctttgac
cctattgctgaccatatccacagcgtggagatgaagcagggccgtactttgctgcactgt
gctgctggtgtgagccgctcagctgccctgtgcctcgcctacctcatgaagtaccacgcc
atgtccctgctggacgcccacacgtggaccaagtcatgccggcccatcatccgacccaac
agcggcttttgggagcagctcatccactatgagttccaattgtttggcaagaacactgtg
cacatggtcagttccccagtgggaatgatccctgacatctatgagaaggaagtccgtttg
atgattccactaaagaagttgaagtacctggccttcctccacaagtggatgaacagcaac
ccttcccgaggcacctaccacttctgggcccccaccacttccgggtccccagccgcatct
tctggcggaccccgaggcatgctgccccgcgagaccaaggaagccaggccgcccaagacc
gcctcaaggtgtttaacggcatcccaccaccctatgacgaaaaagcaggtggtggttcct
gctgccctccaggttgtgcatctgaagcctacaagaaagtttgcctacctggggcagctg
gatcacaaagttggctggaagtaccagacagtgacagccaccctggaggagaagaggaag
gagaaggccaagatccactaccagaataagaaacagctcatgggatggccgggcgcgggt
ccagactaa

>gi568815576r:30563440_30764003|GENSCAN_predicted_peptide_4|298_aa
MSIFKGNDSSGKHIKHADIYERLVAVSANHGGPPSPSLQHHHPPTPMSHPGASIPVVREQ
TIAQHEPAALVALQIVGPLEKPALEAVQRQRGRGFNAGSDPDSGLRKVALPTARESGSDA
ALVKGPAPTPELDSDPGRDPCSSSDGCPAPGSGSDVVSDTGSDLGTASETASDTCSDSGP
RSGSGTGWGWGLGSGPEPDVEALMPGAAVWHDRQGTTVNSDESPRERPPQPPPRLGAAAF
PIEPADPRAAERPVRPVEGALTTPVGGRAWWSVNSEGDGALQATVSASAQPCQALEEQ

>gi568815576r:30563440_30764003|GENSCAN_predicted_CDS_4|897_bp
atgagcatctttaagggtaatgacagtagtgggaaacacatcaaacatgctgatatctat
gagagactagtggcagtgtccgccaaccatggaggccctccatcaccatccctgcagcat
caccaccctccaacccccatgtcccaccctggcgcttccatacctgtagtaagagagcaa
accattgcccagcacgaaccagcggcgctggtagcccttcagatagttggtccacttgag
aagccagccctcgaagctgtccagaggcaaagaggcaggggctttaacgctggcagcgat
cctgactcgggtctgagaaaggtcgcgctccccaccgcccgggagagcggctccgatgcg
gccttagtgaagggcccagcccctacacctgagcttgactctgaccccggccgcgacccc
tgcagcagttccgatggctgcccagcccctggctccggctcagacgtcgtctcggacaca
ggttccgatcttggcactgcctccgaaactgcctccgacacctgttctgacagcggtccc
cgctccggttcgggcacgggctggggctggggcttgggctccggcccggagccggacgtg
gaagcgctcatgcccggcgccgccgtgtggcacgacaggcaggggacaaccgtgaacagc
gacgagagcccgcgggagcggccgccacagccgccgcctcggctcggagccgccgctttc
cccatagagccggccgacccgcgcgcggccgagcggccagtccggccggtggaaggagct
ctgacaacacctgtgggcggaagagcttggtggtcggtcaactccgaaggggatggcgcg
cttcaggccacggtctctgcttcggcccagccgtgccaggcgctggaggaacaatga

>gi568815576r:30563440_30764003|GENSCAN_predicted_peptide_5|69_aa
MADGFPSNFQKEKTIGIKFHDIGFGNDFLDMTPKAQATKAKTDKWDSIEGHNLSSLKDTI
NKVKRKLME

>gi568815576r:30563440_30764003|GENSCAN_predicted_CDS_5|210_bp
atggcagatggtttcccatcaaattttcagaaagagaaaaccataggcataaagtttcat
gacattggatttggcaatgatttcttggatatgacaccaaaagcacaggcaacaaaagca
aaaacagacaaatgggactccatcgaaggacacaacttaagttccttgaaggacacaatc
aacaaagtaaaaaggaaacttatggaatag

>gi568815576r:30563440_30764003|GENSCAN_predicted_peptide_6|277_aa
MASGRGEIKVTTQLIPLLDETSQRATETRNQGEMAHTCRGTINLSTAHIDTEDSCGILLT
SGARSYHLKASSEVDRQQWITALELAKAKAVRVMNTHSGSEHLGQRVCIWWCHESGGSGN
CKPLVGSGGQETQASVDQSGRSRNFLKIMQQVAVMGLVIRQQFSYDSQCEGFLLQLAGCG
ALYELKLQEQGVAAPTEAGVIGPFAEHTYTCYAATFCSDPPSHADNTPQTQGICCVVTPS
NHADHTPQTQDPSSFCCLHWHTILLPASVNAVPLVGK

>gi568815576r:30563440_30764003|GENSCAN_predicted_CDS_6|831_bp
atggcaagtggcagaggagagatcaaagtgaccacccagctcattcccttgctggatgag
acttcacagcgagctacagagacacgaaatcagggtgaaatggcccacacgtgccgtgga
accatcaacctgtccaccgcgcacattgacacggaggactcttgtggtatcttgctgacc
agtggggccaggagctaccacctcaaggccagctcagaggtggaccggcagcagtggatc
accgccctggagctggccaaggccaaggctgtccgcgtgatgaacactcattcaggtagt
gagcacttgggacagcgggtgtgtatatggtggtgtcatgagtctggaggaagtgggaat
tgcaagccactggtgggcagtggtggccaggagacccaggccagcgtggatcaatctgga
aggtcaaggaacttcttgaaaataatgcagcaggtggcagtcatgggattagtcatccgg
caacagttttcctacgacagccagtgcgaggggtttcttttgcagttggcagggtgcgga
gccctatatgaactcaaacttcaggagcaaggtgtggcagctcccacagaggcaggggtg
atagggccctttgctgagcacacgtacacatgctatgcagccacgttctgcagtgaccct
cccagccatgcagacaacactcctcaaacccagggtatctgctgtgtggtgaccccttcc
aaccatgcagaccacactcctcaaacgcaggacccatccagcttctgctgtcttcactgg
cacaccatcttgctgccagccagcgtgaatgctgtacctcttgttggcaag