GENSCAN 1.0	Date run:  4-Nov-116	Time: 03:42:45

Sequence gi568815578f:10175492_10406194 : 230703 bp : 40.33% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +  10078  10163   86  2  2  134   43   120 0.934   8.94
 1.02 PlyA +  11181  11186    6                               1.05

 2.05 PlyA -  12360  12355    6                               1.05
 2.04 Term -  13559  13461   99  2  0   84   54    91 0.277   2.45
 2.03 Intr -  26073  25950  124  2  1   76   36   118 0.655   5.07
 2.02 Intr -  26291  26168  124  0  1   85   96    20 0.501   1.22
 2.01 Init -  32248  32191   58  1  1   79  100    37 0.780   5.52
 2.00 Prom -  36052  36013   40                              -8.25

 3.00 Prom +  37754  37793   40                              -2.25
 3.01 Init +  43110  43182   73  2  1   62   62    93 0.517   5.38
 3.02 Intr +  43439  43576  138  0  0   67   34    90 0.328   1.01
 3.03 Intr +  44858  44976  119  0  2   45  103    73 0.486   3.76
 3.04 Intr +  56695  56918  224  0  2   80   72   122 0.091   5.80
 3.05 Intr +  61109  61242  134  2  2    6   31   137 0.012  -0.83
 3.06 Intr +  65318  65510  193  0  1   80   57   148 0.187   8.53
 3.07 Term +  71688  71811  124  0  1   54   45   107 0.233  -0.12
 3.08 PlyA +  77109  77114    6                               1.05

 4.00 Prom +  77961  78000   40                              -5.05
 4.01 Init + 100001 100072   72  1  0  104   94   137 0.725  17.02
 4.02 Intr + 106610 106768  159  1  0   49   76    61 0.417   0.26
 4.03 Intr + 107813 108009  197  1  2   50  102    86 0.670   3.49
 4.04 Intr + 121434 121559  126  0  0   93   99   151 0.999  15.57
 4.05 Term + 123777 123972  196  0  1   73   47   269 0.675  17.20
 4.06 PlyA + 125451 125456    6                              -0.45

 5.05 PlyA - 126296 126291    6                               1.05
 5.04 Term - 128160 128033  128  1  2  108   49    59 0.273   1.46
 5.03 Intr - 133513 133355  159  2  0    5   80   241 0.203  14.04
 5.02 Intr - 144685 144506  180  2  0   64   80    73 0.077   3.02
 5.01 Init - 147125 147119    7  2  1   86   98     0 0.136   1.89
 5.00 Prom - 149399 149360   40                              -6.05

 6.00 Prom + 155914 155953   40                              -6.65
 6.01 Init + 156891 157005  115  2  1   48  111    60 0.750   4.72
 6.02 Intr + 166624 166785  162  2  0   -9   56   153 0.334   1.43
 6.03 Term + 166940 167067  128  0  2   91   45    69 0.383   0.36
 6.04 PlyA + 168375 168380    6                               1.05

 7.07 PlyA - 169293 169288    6                               1.05
 7.06 Term - 173971 173666  306  1  0   -2   37   384 0.886  18.43
 7.05 Intr - 177251 177130  122  0  2  110   23    60 0.359   0.99
 7.04 Intr - 185462 185310  153  0  0   96   37   105 0.004   5.32
 7.03 Intr - 188249 188083  167  1  2   58   55   100 0.008   2.38
 7.02 Intr - 188897 188763  135  1  0   43   68   143 0.004   6.56
 7.01 Init - 199884 199823   62  0  2   77   65    75 0.070   4.87
 7.00 Prom - 202703 202664   40                              -5.95

 8.00 Prom + 210797 210836   40                              -3.95
 8.01 Init + 210894 210986   93  2  0   84   36    65 0.793   1.33
 8.02 Intr + 211287 211791  505  2  1   59   23   644 0.656  46.62
 8.03 Term + 211828 212003  176  2  2  -11   32   259 0.839   7.34
 8.04 PlyA + 212187 212192    6                               1.05

 9.00 Prom + 212993 213032   40                              -3.45
 9.01 Init + 215010 215101   92  2  2   90   69    77 0.835   6.01
 9.02 Term + 223366 223513  148  1  1   83   49    90 0.787   0.99
 9.03 PlyA + 224113 224118    6                               1.05

10.02 PlyA - 224448 224443    6                               1.05
10.01 Term - 230196 229756  441  0  0   81   48   375 0.991  27.07

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl + 188399 188950  552  1  0   49   39   313 0.929  18.36


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815578f:10175492_10406194|GENSCAN_predicted_peptide_1|28_aa
XLWVECKLLEVFEDVTKEAMRIGNEAVV

>gi568815578f:10175492_10406194|GENSCAN_predicted_CDS_1|87_bp
ngcttatgggtggaatgcaagctattggaagtatttgaagatgtgaccaaggaagctatg
agaattggaaatgaggcagttgtttag

>gi568815578f:10175492_10406194|GENSCAN_predicted_peptide_2|134_aa
MERLDSDSNPHKTIKSTGKGVFGNERQPFCQNYGLPHFSTPGLHGFKALDQRKALAWGSG
RLKGFAKAQMTIVAGVCPAEASFNQQNGQVDPQVDESHKMVVRFLAEKPVSKGKLTLSFL
RGPPDIFPSTTPTI

>gi568815578f:10175492_10406194|GENSCAN_predicted_CDS_2|405_bp
atggagagactggacagtgactcaaatccacataaaacaataaagagtactggtaaaggg
gtatttgggaatgagaggcagcctttctgccagaattatgggcttcctcatttctctacc
ccaggactgcatgggtttaaggcactggaccaaaggaaagccttggcatggggttctgga
agactaaagggatttgccaaagcccagatgactatagttgcaggagtgtgtcctgctgag
gccagcttcaaccagcagaacggccaagttgacccacaggttgatgagtcacacaaaatg
gttgttcggtttttggctgagaagccagtgagcaaagggaagctcactctcagctttcta
cgcggtcctcccgacatcttcccaagcactaccccgaccatctga

>gi568815578f:10175492_10406194|GENSCAN_predicted_peptide_3|334_aa
MNAFAQDRVLKWSHKSRPVRVFIEVATCRGPENTTLPRSPGKNPPPQVVALARDGCIPRR
DSSWAVRVGLELLEVFAISTGYRRLIALDFDNIKTGLPQENPSVSFRVMQKHTHAICTLW
TSTMEKELTIVVCILDSKIPRKISDWHSLGQVLNQLWVWSGMEECDFHAGTTQFSWEEPV
AKQTHPLPNEHFGNGNTREEAMEKNSEGLSAVLPRHGKQAKQLRGSLAAEEARLAEPWKS
RQGALEHSVFQCLPLATWGVMRMASIAPWSQQSQQALGVPDMSWRKASVKQLPGIWEAAE
STLVLPRRLPLSSYTDDQQQSGQVVPPTTTCSDQ

>gi568815578f:10175492_10406194|GENSCAN_predicted_CDS_3|1005_bp
atgaacgcgtttgcccaagaccgagtgttaaaatggagtcataagagtcgccccgtgcgg
gtgtttatagaagttgcaacctgcagaggcccggagaacacaaccctcccgagaagccca
ggtaagaacccccctccccaggtcgtggctctggctcgggatggctgcatacccagaagg
gacagcagctgggcagtccgagtgggcttggagttactggaagtatttgctatcagcact
ggttatcgcaggctgatagctttagattttgacaatattaagactggccttcctcaggag
aatccaagtgtgtccttcagggtaatgcagaaacatacacatgcgatttgtactctctgg
acttccactatggaaaaggaactgacaattgttgtctgtatcctcgattcaaaaatacca
aggaagatctctgattggcatagcttgggccaagtgctcaatcaattgtgggtgtggagt
ggcatggaggaatgtgatttccatgctggaaccacacagttcagttgggaagaaccagtt
gcaaagcagacacatcctctgcccaatgagcactttggtaatgggaacacaagggaggag
gcaatggaaaaaaactctgaaggcctttcagctgtgttgccgcgtcatggaaaacaagcc
aagcaactgcgtggaagcctcgcagcagaggaggctaggctcgcagagccctggaagagc
aggcagggggctctggagcattcagtctttcagtgtttgccattagcgacctggggagtg
atgcgaatggcttcaattgctccgtggagccagcaatcacagcaggctttgggggtccct
gacatgagctggagaaaagcctctgtgaagcagctgccagggatttgggaagctgcagag
agcaccctagttcttcccagaaggctgcccctgagctcttatactgatgaccaacaacag
agtggtcaagtggtgccaccaacaaccacttgttctgatcagtga

>gi568815578f:10175492_10406194|GENSCAN_predicted_peptide_4|249_aa
MAEDADMRNELEEMQRRADQLADECLEQSRGSINTRKEGGKEGRMEGRKEGRKEGRKEGR
KEGRKEGKGRKESKKEPENGGTEQSGHLPEAPQLGNEITSIPAQSLSPQSALSRTPEATL
GQPCPYYILTLPLKPIKVCSKARLKSSDAYKKAWGNNQDGVVASQPARVVDEREQMAISG
GFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDRIMEKVSTWQSA
SPYCESLLK

>gi568815578f:10175492_10406194|GENSCAN_predicted_CDS_4|750_bp
atggccgaagacgcagacatgcgcaatgagctggaggagatgcagcgaagggctgaccag
ttggctgatgagtgcctagagcagagtagaggctcaataaacactaggaaggaaggaggg
aaggaaggaaggatggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaagg
aaggaaggaaggaaggaagggaaaggaaggaaggaaagtaaaaaggagcctgagaacgga
ggcacagaacagtcaggacacttgcctgaggccccacagttagggaatgaaatcaccagc
attccagcccagagtctgtctccacagtctgcgctgtcaaggactcctgaggccaccctg
ggccagccctgtccatactacatcctgactttgccactaaagcctatcaaagtgtgctca
aaggcaaggcttaaatcaagtgatgcttacaaaaaagcctggggcaataatcaggacgga
gtggtggccagccagcctgctcgtgtagtggacgaacgggagcagatggccatcagtggc
ggcttcatccgcagggtaacaaatgatgcccgagaaaatgaaatggatgaaaacctagag
caggtgagcggcatcatcgggaacctccgtcacatggccctggatatgggcaatgagatc
gatacacagaatcgccagatcgacaggatcatggagaaggtgagcacgtggcagtcagca
agtccctactgcgagtcacttctgaaatga

>gi568815578f:10175492_10406194|GENSCAN_predicted_peptide_5|157_aa
MPDMAMGKEGAEERDIRRWHRQDAVTDLMRGWFLASVPRQRSLEGGGGEHVMVVHDEFEV
PVERGGGGGRGDGSDDDDVGRGDGWSGGGGDGGSGSGGGDGGDDGDYNGGGNKGGAWEEE
EEAARQCGETKLFFSQPVSLNDYQLCTYCGAVLPNFY

>gi568815578f:10175492_10406194|GENSCAN_predicted_CDS_5|474_bp
atgccagatatggccatgggaaaggagggggcagaggaaagagatattcggaggtggcat
agacaagacgcggtgactgatttaatgagggggtggttcctggcttcagtcccaaggcag
agaagtttagaagggggcggtggtgagcatgtcatggtggttcatgatgagtttgaagtg
cctgtggagagaggtggaggaggtggcagaggtgatggaagtgatgatgatgatgttggc
agaggagatggatggtcaggtggtggtggtgatggtggcagtgggagcggtggtggtgat
ggaggtgatgatggtgattataatggtggtggtaataaaggtggagcctgggaagaagag
gaggaggctgccaggcagtgtggggaaaccaaactgtttttctctcaaccagtatcactc
aatgattaccagctttgtacctattgtggtgctgtacttcccaatttttattga

>gi568815578f:10175492_10406194|GENSCAN_predicted_peptide_6|134_aa
MSTRNGLEKAQKRGREETSGTMSTKGRETQSFRMEKKVGEREERRAAALLEAQTKSSQNQ
GYDTQFRALPFLVSPRFWAPTGSPVPAVEATCGVGSRLGAKAECSLPGQVGGTSPVGPSK
TQAKVPLATDVPSW

>gi568815578f:10175492_10406194|GENSCAN_predicted_CDS_6|405_bp
atgagcacaaggaacggcctggaaaaggcacagaaaagaggcagagaggaaacttccggc
actatgtccacaaaaggcagggaaacacaaagcttcagaatggaaaaaaaggttggagaa
agagaggagagaagagctgctgcccttctggaagcccagactaagagctcccagaaccag
ggctatgacacccaatttagggctctgccattcctggtgtctccaagattctgggcacca
acaggttccccagtgcctgcagtggaagccacttgtggtgtgggatccaggctaggagca
aaagccgaatgcagcctgccaggccaagtgggtggaacaagtccagtgggcccaagcaaa
actcaggcaaaggtgccattggccacagatgttcccagctggtga

>gi568815578f:10175492_10406194|GENSCAN_predicted_peptide_7|314_aa
MWKKKIYGQRKESEVRKTEVSIKIHASGFDKLLESMFCILLVVEAFSLQKVVKMLEEVVA
GWREVRKVDVELFANFPCNCKRISFEDCSQLVVVNFRWSATMLLIFKALISFAKLFEPPL
YCLITLINYHLLKGSLEHRTSPGLRHQPVLSLSLAGSVASEFPAKVLKMFENFPLITKPT
PLAGDMPTNPKALVTQRKQPFFRAFITCNHAFYRQPKYPRKSTPRRNKLGHYVIIKFLLT
TESPMKKTEDNSTPVFIVDVKANKHQIKQAVKKLCDIDVAKVNTLVRTDREKKAHILLGP
DYDALDVANKIGII

>gi568815578f:10175492_10406194|GENSCAN_predicted_CDS_7|945_bp
atgtggaagaagaagatttatggacagagaaaagaaagtgaggtacggaaaacagaagtg
agcataaaaatccatgcttcgggatttgacaaactcttggaaagcatgttctgcatcctg
ctggtagtggaagcattttccctgcaaaaagttgtcaagatgctggaagaagtggtagct
ggttggcgagaggtcagaaaggtcgatgttgagttatttgccaacttcccgtgtaattgt
aagaggatcagctttgaagattgctctcaattggttgttgtaaatttccgatggtcagcc
actatgctcctcatcttcaaggctctcatctcctttgcaaagctttttgaaccaccactg
tactgtctgataactttaataaactaccatcttcttaaaggctctctggagcacaggact
tcacctgggctccggcatcaaccagtattaagtttatccttagcaggttcagtggcctct
gagtttcctgctaaggtgctgaaaatgtttgaaaactttccactgatcacaaaacccaca
ccactcgctggtgatatgcccacgaatcccaaggctttagtcacacaaagaaaacagccg
ttcttccgcgctttcataacatgtaaccatgccttttacaggcagcccaaatatcctcga
aagagcacccccaggagaaacaagcttggccactatgtcatcatcaagtttctgctgacc
actgagtctcccatgaagaagacagaagacaacagcacacctgtgttcattgtggatgtt
aaagccaacaagcaccagatcaaacaggctgtgaaaaagctctgtgacattgatgtggcc
aaggtcaacaccctggttaggactgatagagagaagaaggcacatattcttctgggtcct
gattatgatgctttggatgttgccaacaaaattgggatcatctaa

>gi568815578f:10175492_10406194|GENSCAN_predicted_peptide_8|257_aa
MSLDVMIELYRGNIWNDAKTVNVITTAHFSKVSAAPPKRSNKDPPFAAQASHHLVPPEII
QSLLMTVANNLVTDKNSGEVMTVGINAIKEKTARCSLAMTEELLQDLAQYKTHKDKNVMM
CARTLIQLFRTLNPQMLQKKFQGKPTEASIEARVQEYGELDAKDYIPGAEVLEGEKEENA
ENDEDGWENTSLSEEQDADEQQEISKKLNRMPMEEWKAKAAAISTSQVLTQEDFQKIRMA
QLRKELDAAPGKSQKRK

>gi568815578f:10175492_10406194|GENSCAN_predicted_CDS_8|774_bp
atgtctttagatgtaatgattgaactctacagagggaacatctggaatgatgccaaaact
gtcaatgttatcacaactgcacatttctctaaggtttctgcagccccaccaaagagaagt
aacaaagatcctccgtttgctgcacaagcatctcatcacctagtacccccagagattatt
caatcattgcttatgactgtggcaaacaatttggttaccgacaagaattctggagaagtc
atgacagtaggaatcaatgctataaaagagaaaacagctcgatgttctctggccatgact
gaagaacttctccaagacctggctcagtataaaacacacaaggataagaatgtaatgatg
tgtgctagaactttgattcagctcttccgaacactgaatcctcagatgctgcagaagaaa
ttccagggtaagcctactgaggcctccatagaagcaagagtacaagaatatggagaatta
gatgctaaagattacattccaggagcagaagttctggaaggtgagaaagaagagaatgct
gaaaatgatgaagatggatgggaaaataccagtctcagtgaggagcaggatgctgatgaa
cagcaagaaatctccaagaagctgaacaggatgcccatggaggagtggaaagccaaagct
gcagccatcagcaccagccaagttttaactcaggaagacttccagaaaatccgcatggcc
caactgagaaaagaacttgatgctgcccctgggaaatcccagaagaggaaataa

>gi568815578f:10175492_10406194|GENSCAN_predicted_peptide_9|79_aa
MAPASAPGERLRLLLLMAEGKGKLACSGITCPGEGFTSWQFFTICGELNDVPPKDMSKDL
SPATCECDLIWKQGLCKCN

>gi568815578f:10175492_10406194|GENSCAN_predicted_CDS_9|240_bp
atggcgccagcatctgctcctggtgagagactcaggctgcttctactcatggcagaaggc
aaagggaagctggcctgttcaggaatcacgtgccctggagaaggatttacatcttggcag
ttttttaccatctgtggtgagttgaatgatgtccccccaaaagatatgtccaaagaccta
agtcctgctacctgtgaatgtgaccttatttggaaacagggtctttgcaagtgcaattaa

>gi568815578f:10175492_10406194|GENSCAN_predicted_peptide_10|146_aa
THNDPESILKDDECTQTELQLIAEAFCSALESVVGSLEHDGGEILTDMKYGHLWSVQADS
PCVANWPDLLSQCGCGLYNSQEELNWSFLRSTRRPFVPQSCLPHEAVGSASNLTLDCLTA
KLSGLQVAVETANLILDLSYVIEDKN

>gi568815578f:10175492_10406194|GENSCAN_predicted_CDS_10|441_bp
actcacaacgacccagaaagcattctcaaagatgatgaatgtactcaaacagaacttcaa
ttaattgctgaagcattttgcagtgccctagaatctgttgttggctctttagaacatgat
ggaggtgaaattctcactgacatgaagtatggacacctttggtcagttcaggcagattct
ccctgtgttgctaactggccagatttgctttcacagtgtggctgtggattatacaatagc
caggaagaactcaactggtctttcttaagaagcacacgtcgtccatttgtgccacaaagc
tgccttccacatgaagctgtgggctcagccagcaacctgaccttggactgtttgactgca
aagcttagtggcctacaggtggctgtagagacagccaatttgattttggatctttcatat
gttattgaagataaaaactaa