GENSCAN 1.0	Date run:  4-Nov-116	Time: 03:26:00

Sequence gi568815576f:40579446_40781925 : 202480 bp : 45.60% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   7441   7555  115  2  1   80    1   193 0.140   9.31
 1.02 Intr +  25803  26010  208  0  1   54   69    56 0.002  -0.62
 1.03 Term +  57912  58097  186  2  0   30   40   144 0.127   1.29
 1.04 PlyA +  59207  59212    6                              -0.45

 2.00 Prom +  60002  60041   40                              -2.16
 2.01 Init +  72386  72525  140  1  2  100   75    60 0.212   4.03
 2.02 Term +  82769  82967  199  2  1   73   38   136 0.602   3.97
 2.03 PlyA +  85812  85817    6                               1.05

 3.03 PlyA -  88070  88065    6                               1.05
 3.02 Term -  94398  94039  360  0  0   -7   48   516 0.512  32.64
 3.01 Init -  94695  94525  171  0  0   91   34    70 0.480   1.35
 3.00 Prom -  96362  96323   40                             -10.74

 4.00 Prom +  96820  96859   40                              -9.06
 4.01 Init + 100016 100289  274  1  1   98  109   178 0.899  17.55
 4.02 Term + 101504 102483  980  0  2  124   43  1675 0.999 158.83
 4.03 PlyA + 102614 102619    6                               1.05

 5.03 PlyA - 103055 103050    6                               1.05
 5.02 Term - 130449 130392   58  2  1   78   41    62 0.552  -2.34
 5.01 Init - 131591 131551   41  2  2   69  117    74 0.872   6.15
 5.00 Prom - 168726 168687   40                              -1.16

 6.06 PlyA - 170316 170311    6                               1.05
 6.05 Term - 191536 191389  148  0  1  103   53   142 0.883   9.57
 6.04 Intr - 194574 194492   83  0  2   88  105    19 0.987   2.04
 6.03 Intr - 197690 197595   96  2  0  106   96    76 0.978  10.41
 6.02 Intr - 197928 197783  146  1  2   59   84    86 0.988   5.30
 6.01 Intr - 199680 199564  117  1  0   76  111    40 0.930   5.54

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815576f:40579446_40781925|GENSCAN_predicted_peptide_1|169_aa
XLLVLLVLLVLVLVLLLLLPPPPLPYPPGVCGCWPGKACTGKQKQVSRQAIKQKTNFKLL
QVIKPAKKGLLWAESANFLDIVIRKVERTEDQRMTVQPTEGSGMPEEVAVEISSSESALG
LEEEKGCVSPRACIGRLQEEHLQKRGFHGMTPDNSWNSKILYPCPHPFV

>gi568815576f:40579446_40781925|GENSCAN_predicted_CDS_1|510_bp
ntgctgctggtgctgctggtgctgctggtgctggtgctggtgctgctgctgctgctgcca
ccgccgccgctgccttatccacctggagtttgtggttgctggcctggcaaagcctgcaca
ggaaaacaaaaacaagtaagtaggcaagccatcaagcagaaaaccaatttcaaacttctc
caagttataaaaccagcaaagaagggacttttgtgggcagaaagtgccaactttttagat
atagtgataaggaaagttgaaaggactgaagaccaacggatgacagtgcagccgactgaa
gggagtgggatgccagaagaggtggccgtggagatcagcagcagcgaaagcgctctgggc
ttagaagaggaaaagggctgcgtgagcccaagagcttgcatcggaaggctccaggaagag
catctgcaaaaaagaggattccacgggatgacccccgacaactcttggaattctaaaatc
ctatacccttgcccgcacccattcgtgtag

>gi568815576f:40579446_40781925|GENSCAN_predicted_peptide_2|112_aa
MATSGSVTTASAPCCGARLEARGLLGLHPGNGERDCGAAGTTYVPYSGLMNKVTMVTGME
VKHGLSNMGSTHQGQPGYGHHSVPNLPAAKTYREPPLGRHSPVWSASYVVAG

>gi568815576f:40579446_40781925|GENSCAN_predicted_CDS_2|339_bp
atggccacatccgggtcagttactactgcctccgccccatgctgtggagcccggctggaa
gcccgggggttgttgggtcttcacccgggaaatggggagagagactgcggggcagctggc
accacatacgtgccttacagtgggctcatgaacaaagtgaccatggtgacagggatggag
gttaagcatgggctcagcaacatgggctccactcaccaaggtcaacctggctatggccac
cactcagtgcccaatctgccagcagccaagacctacagggagcccccactaggacgccat
tccccagtgtggtcagccagctacgtggtggcaggttga

>gi568815576f:40579446_40781925|GENSCAN_predicted_peptide_3|176_aa
MEKAGTYLDGGAKRVTISAPSDAPMFVMGVNHEKYGNSLKIISNASCTTSCLTPLAKNII
PAKPVGKVIPELNGKLTGVAFHVPTTNMLVMDLTCHLEKPAKYSDIKRMVKQALREILKG
ILGCTEHKVVSSDFDSDTHSSIFNAGAGIALNNDFVKLISWYDRVVNLMVHMASKE

>gi568815576f:40579446_40781925|GENSCAN_predicted_CDS_3|531_bp
atggagaaggctgggacttacttagatgggggagccaaaagagtcaccatctctgcccct
tctgatgcccccatgtttgtgatgggtgtgaatcatgagaagtatggaaacagcctcaag
attatcagcaatgcctcctgcaccaccagttgcttaacccccctggccaagaacatcatt
cctgccaagcctgtgggcaaagtcatccccgagctgaatgggaagctcactggcgtggcc
ttccacgtccccaccaccaacatgttggtcatggacctgacctgccatctggagaaacct
gccaaatacagtgacatcaagaggatggtgaagcaggcattgagggagatcctcaagggc
atcctgggctgtactgagcacaaggtcgtctcctctgactttgacagtgacacccattct
tccatcttcaatgctggggctggcattgccctcaacaatgactttgtcaagctcatttcc
tggtatgacagggtggtgaacctcatggtccacatggcctccaaggagtaa

>gi568815576f:40579446_40781925|GENSCAN_predicted_peptide_4|417_aa
MKKGVGRAVGLGGGSGCQATEEDPLPNCGACAPGQGGRRWRLPQPAWVEGSSARLWEQAT
GTGWMDLEASLLPTGPNASNTSDGPDNLTSAGSPPRTGSISYINIIMPSVFGTICLLGII
GNSTVIFAVVKKSKLHWCNNVPDIFIINLSVVDLLFLLGMPFMIHQLMGNGVWHFGETMC
TLITAMDANSQFTSTYILTAMAIDRYLATVHPISSTKFRKPSVATLVICLLWALSFISIT
PVWLYARLIPFPGGAVGCGIRLPNPDTDLYWFTLYQFFLAFALPFVVITAAYVRILQRMT
SSVAPASQRSIRLRTKRVTRTAIAICLVFFVCWAPYYVLQLTQLSISRPTLTFVYLYNAA
ISLGYANSCLNPFVYIVLCETFRKRLVLSVKPAAQGQLRAVSNAQTADEERTESKGT

>gi568815576f:40579446_40781925|GENSCAN_predicted_CDS_4|1254_bp
atgaagaagggagtggggagggcagttgggcttggaggcggcagcggctgccaggctacg
gaggaagacccccttcccaactgcggggcttgcgctccgggacaaggtggcaggcgctgg
aggctgccgcagcctgcgtgggtggaggggagctcagctcggttgtgggagcaggcgacc
ggcactggctggatggacctggaagcctcgctgctgcccactggtcccaacgccagcaac
acctctgatggccccgataacctcacttcggcaggatcacctcctcgcacggggagcatc
tcctacatcaacatcatcatgccttcggtgttcggcaccatctgcctcctgggcatcatc
gggaactccacggtcatcttcgcggtcgtgaagaagtccaagctgcactggtgcaacaac
gtccccgacatcttcatcatcaacctctcggtagtagatctcctctttctcctgggcatg
cccttcatgatccaccagctcatgggcaatggggtgtggcactttggggagaccatgtgc
accctcatcacggccatggatgccaatagtcagttcaccagcacctacatcctgaccgcc
atggccattgaccgctacctggccactgtccaccccatctcttccacgaagttccggaag
ccctctgtggccaccctggtgatctgcctcctgtgggccctctccttcatcagcatcacc
cctgtgtggctgtatgccagactcatccccttcccaggaggtgcagtgggctgcggcata
cgcctgcccaacccagacactgacctctactggttcaccctgtaccagtttttcctggcc
tttgccctgccttttgtggtcatcacagccgcatacgtgaggatcctgcagcgcatgacg
tcctcagtggcccccgcctcccagcgcagcatccggctgcggacaaagagggtgacccgc
acagccatcgccatctgtctggtcttctttgtgtgctgggcaccctactatgtgctacag
ctgacccagttgtccatcagccgcccgaccctcacctttgtctacttatacaatgcggcc
atcagcttgggctatgccaacagctgcctcaacccctttgtgtacatcgtgctctgtgag
acgttccgcaaacgcttggtcctgtcggtgaagcctgcagcccaggggcagcttcgcgct
gtcagcaacgctcagacggctgacgaggagaggacagaaagcaaaggcacctga

>gi568815576f:40579446_40781925|GENSCAN_predicted_peptide_5|32_aa
MWAFWSALLTLPARPCAYDLAVFKVPTSPDIL

>gi568815576f:40579446_40781925|GENSCAN_predicted_CDS_5|99_bp
atgtgggccttttggagtgccctgctgacactccctgcccggccctgtgcttatgacttg
gcagtgtttaaggttcctaccagccctgacatcctgtga

>gi568815576f:40579446_40781925|GENSCAN_predicted_peptide_6|196_aa
XVVNVLLTTPLWVVNTRLKLQGAKFRNEDIVPTNYKGIIDAFHQIIRDEGISALWNGTFP
SLLLVFNPAIQFMFYEGLKRQLLKKRMKLSSLDVFIIGAVAKAIATTVTYPLQTVQSILR
FGRHRLNPENRTLGSLRNILYLLHQRVRRFGIMGLYKGLEAKLLQTVLTAALMFLVYEKL
TAATFTVMGLKRAHQH

>gi568815576f:40579446_40781925|GENSCAN_predicted_CDS_6|591_bp
ngagtggttaatgtgttgctaacaactccactctgggtggtaaacaccagactgaagctt
caaggagcaaaatttaggaatgaagacattgtaccaacaaactacaaaggtatcattgat
gcttttcatcagatcattcgcgatgaaggaatctcggctttatggaatggcacatttccc
tcattgctgttggtcttcaatcctgccatccagttcatgttttatgaaggtttaaaacgg
cagcttttaaagaaacggatgaagctttcttccttggatgtgttcatcattggtgcagta
gccaaagcgattgccaccacggtgacctatcccctgcagacggtacagtcaattctgagg
tttgggcgtcatagactaaacccagaaaacagaacattgggaagtcttcggaatattctc
tatcttcttcaccaacgagtaagacgttttggaataatgggactctacaaaggccttgaa
gccaaactgctgcagacagtcctcactgctgctctcatgttccttgtttatgagaaactg
acagctgccaccttcacagttatggggctgaagcgtgcacaccaacactga