GENSCAN 1.0	Date run:  4-Nov-116	Time: 03:19:46

Sequence gi568815587r:75166166_75387377 : 221212 bp : 50.03% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   3013   3241  229  0  1   46   85   366 0.974  28.63
 1.02 Intr +   3516   3599   84  1  0   61  105    82 0.533   6.99
 1.03 Intr +   6214   6404  191  2  2  130  121   136 0.968  20.40
 1.04 Intr +  20945  20988   44  1  2   67  123   -32 0.086  -4.76
 1.05 Intr +  21355  21562  208  1  1  -12   50   213 0.303   6.58
 1.06 Intr +  21971  22073  103  1  1  123  115   110 0.996  16.95
 1.07 Intr +  27053  27410  358  0  1  126  109   470 0.898  47.21
 1.08 Intr +  30349  30514  166  1  1   92  109   131 0.999  15.56
 1.09 Intr +  34059  34222  164  2  2  112   67   164 0.969  15.47
 1.10 Intr +  36736  36800   65  1  2   58   38    81 0.702  -1.54
 1.11 Intr +  37142  37262  121  0  1   51   97   185 0.893  15.25
 1.12 Intr +  38235  38411  177  0  0  104   39   134 0.158   9.13
 1.13 Intr +  46147  46237   91  1  1   80   55    64 0.247   2.30
 1.14 Intr +  70845  70982  138  2  0   34   80    91 0.429   3.56
 1.15 Term +  74720  76033 1314  1  0   59   53  2567 0.598 241.88
 1.16 PlyA +  81307  81312    6                               1.05

 2.21 PlyA -  82350  82345    6                               1.05
 2.20 Term - 100109  99998  112  1  1   86   42   188 0.913  12.03
 2.19 Intr - 101538 101487   52  1  1   55   80    47 0.680  -1.43
 2.18 Intr - 103049 102724  326  1  2   67  105   216 0.853  16.62
 2.17 Intr - 106813 106730   84  0  0  110  100    93 0.999  11.64
 2.16 Intr - 108046 107909  138  0  0   83   48   155 0.982  10.58
 2.15 Intr - 110746 110674   73  2  1  139   80   115 0.999  14.26
 2.14 Intr - 111331 111199  133  1  1   92   68   247 0.493  23.32
 2.13 Intr - 112579 112444  136  0  1   77   75   187 0.940  16.87
 2.12 Intr - 114977 114910   68  2  2   74  101   132 0.961  10.80
 2.11 Intr - 115856 115797   60  2  0   99  100    10 0.718   2.23
 2.10 Intr - 117318 117122  197  1  2  101   55   420 0.972  39.13
 2.09 Intr - 117658 117563   96  2  0  133   59    21 0.923   3.68
 2.08 Intr - 118114 118070   45  2  0   93   80    61 0.945   4.18
 2.07 Intr - 121210 121150   61  1  1  122   92   185 0.783  20.61
 2.06 Intr - 123874 123844   31  0  1  122  113    36 0.901   7.63
 2.05 Intr - 137480 137434   47  2  2  111   98    54 0.035   5.91
 2.04 Intr - 146527 146498   30  1  0  134   45    39 0.291   2.53
 2.03 Intr - 148911 148777  135  0  0   74   47   113 0.813   6.56
 2.02 Intr - 154752 154697   56  1  2   89   28    41 0.176  -3.10
 2.01 Init - 160503 160449   55  0  1   81  110    50 0.521   5.99
 2.00 Prom - 169745 169706   40                               0.44

 3.05 PlyA - 170844 170839    6                               1.05
 3.04 Term - 174279 174174  106  2  1  116   39    80 0.500   3.78
 3.03 Intr - 185486 185423   64  0  1   33  117   100 0.018   5.18
 3.02 Intr - 186290 186145  146  1  2  108   23    71 0.016   2.53
 3.01 Init - 211091 211072   20  2  2  114  103   -17 0.026   2.05
 3.00 Prom - 220119 220080   40                              -2.56


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  38235  38415  181  0  1  104   49   142 0.840   8.98
S.002 Term - 126483 126367  117  0  0  125   39    61 0.825   3.44
S.003 Init - 180834 180766   69  0  0   80   73    97 0.871   7.18
S.004 Term + 218369 218561  193  2  1  104   41   116 0.901   5.39


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587r:75166166_75387377|GENSCAN_predicted_peptide_1|1150_aa
MPQDFKASLCLPTTSAPASAPSNGNCSSYTETQHLSVVGIMFVAQTLLGVGGVPIQPFGI
SYIDDFAHNSNSPLYLVTMMGPGLAFGLGSLMLRLYVDINQMPEGGISLTIKDPRWVGAW
WLGFLIAAGAVALAAIPYFFFPKEMPKEKRELQFRRKVLAVTDSPARKLLVGTYILQEVV
RFRGDGDEAGDTDLGEDSGSDDDVRDSDNDIDDSDHHHGGSDSEGSGDSDNDDCAGGGDH
DRDNNNNHHIVMGKDSPSKQSPGESTKKQDGLVQIAPNLTVIQFIKVFPRVLLQTLRHPI
FLLVVLSQVCLSSMAAGMATFLPKFLERQFSITASYANLLIGCLSFPSVIVGIVVGGVLV
KRLHLGPVGCGALCLLGMLLCLFFSLPLFFIGCSSHQIAGITHQTSAHPGLELSPSCMEA
CSCPLDGFNPVCDPSTRVEYITPCHAGCSSWVVQDALDNSQVFYTNCSCVVEGNPVLAGS
CDSTCSHLVVPFLLLVSLGSALACLTHTPSFMLILRGVKKEDKTLAVGIQFMFLRILAWM
PSPVIHGSAIDTTCVHWALSCGRRAVCRYYNNDLLRNRFIGLQFFFKTGSVICFALVLAV
LRQQDKEARTKESRSSPAVEQQLLVSGPGKKPEDSRVDKETEAQKLEVQDPDYKAILPSS
KRKYPDKSWRRGYLLGDLRDVITLCAPYQGLVELINSRVCASRKGPAKALEAQSASKCGS
SDFRDSERTDRDCQPLRVKDSPHPCPPPGAPNSLVSAAARALDAGAAAMAPRAGQPGLQG
LLLVAAALSQPAAPCPFQCYCFGGPKLLLRCASGAELRQPPRDVPPDARNLTIVGANLTV
LRAAAFAGGDGDGDQAAGVRLPLLSALRLTHNHIEVVEDGAFDGLPSLAALDLSHNPLRA
LGGGAFRGLPALRSLQLNHALVRGGPALLAALDAALAPLAELRLLGLAGNALSRLPPAAL
RLARLEQLDVRLNALAGLDPDELRALERDGGLPGPRLLLADNPLRCGCAARPLLAWLRNA
TERVPDSRRLRCAAPRALLDRPLLDLDGARLRCADSGADARGEEAEAAGPELEASYVFFG
LVLALIGLIFLMVLYLNRRGIQRWMRNLREACRDQMEGYHYRYEQDADPRRAPAPAAPAG
SRATSPGSGL

>gi568815587r:75166166_75387377|GENSCAN_predicted_CDS_1|3453_bp
atgccacaggacttcaaggcttccctgtgcctgcccacaacctcggccccagcctcggcc
ccctccaatggcaactgctcaagctacacagaaacccagcatctgagtgtggtggggatc
atgttcgtggcacagaccctgctgggcgtgggcggggtgcccattcagccctttggcatc
tcctacatcgatgactttgcccacaacagcaactcgcccctctacctcgtgaccatgatg
gggccaggcctggcctttgggctgggcagcctcatgctgcgcctttatgtggacattaac
cagatgccagaaggtggtatcagcctgaccataaaggacccccgatgggtgggtgcctgg
tggctgggtttcctcatcgctgccggtgcagtggccctggctgccatcccctacttcttc
ttccccaaggaaatgcccaaggaaaaacgtgagcttcagtttcggcgaaaggtcttagca
gtcacagactcacctgccaggaagttgttggtagggacgtatatacttcaggaggttgtg
aggtttcgtggcgatggagatgaggctggtgatactgatcttggtgaagacagtggtagt
gatgatgatgttagagacagtgataatgatattgatgattctgatcatcatcatggtggt
agtgattctgaaggttcaggtgacagtgataatgatgattgtgctggtggtggtgatcat
gacagagacaacaataacaatcatcacatcgtgatgggcaaggactctccctctaagcag
agccctggggagtccacgaagaagcaggatggcctagtccagattgcaccaaacctgact
gtgatccagttcattaaagtcttccccagggtgctgctgcagaccctacgccaccccatc
ttcctgctggtggtcctgtcccaggtatgcttgtcatccatggctgcgggcatggccacc
ttcctgcccaagttcctggagcgccagttttccatcacagcctcctacgccaacctgctc
atcggctgcctctccttcccttcggtcatcgtgggcatcgtggtgggtggcgtcctggtc
aagcggctccacctgggccctgtgggatgcggtgccctttgcctgctggggatgctgctg
tgcctcttcttcagcctgccgctcttctttatcggctgctccagccaccagattgcgggc
atcacacaccagaccagtgcccaccctgggctggagctgtctccaagctgcatggaggcc
tgctcctgcccattggacggctttaaccctgtctgcgaccccagcactcgtgtggaatac
atcacaccctgccacgcaggctgctcaagctgggtggtccaggatgctctggacaacagc
caggttttctacaccaactgcagctgcgtggtggagggcaaccccgtgctggcaggatcc
tgcgactcaacgtgcagccatctggtggtgcccttcctgctcctggtcagcctgggctcg
gccctggcctgtctcacccacacaccctccttcatgctcatcctaagaggagtgaagaaa
gaagacaagactttggctgtgggcatccagttcatgttcctgaggattttggcctggatg
cccagccccgtgatccacggcagcgccatcgacaccacctgtgtgcactgggccctgagc
tgtgggcgtcgagctgtctgtcgctactacaataatgacctgctccgaaaccggttcatc
ggcctccagttcttcttcaaaacaggttctgtgatctgcttcgccttagttttggctgtc
ctgaggcagcaggacaaagaggcaaggaccaaagagagcagatccagccctgccgtagag
cagcaattgctagtgtcggggccagggaagaagccagaggattcccgagtggataaggag
actgaggcccagaaacttgaggtccaggatcctgactataaagccatattgcctagcagt
aaaaggaagtatccagacaagagctggagaaggggctacctgctgggtgatctcagggac
gtcatcacactctgtgctccctaccaaggcttagtggagctgatcaacagcagggtctgt
gccagcagaaaaggcccagcgaaggcactagaggctcagtcagccagtaagtgcggctcc
tcagactttcgagacagcgaacggaccgaccgggactgccagccgctccgggtcaaggac
tcgccccacccgtgccccccaccaggcgctcccaactcactggtgagcgcggcggcccgg
gcgctggatgcgggggcggccgcgatggccccgcgcgcgggacagccggggctccagggg
ctgctgctcgtggcggcggcgctgagccagcccgcggcaccctgccccttccagtgctac
tgcttcggcggccccaagctgctgctgcgctgcgcgtcgggagccgagctccgccagcct
ccgcgggacgtgccgcccgacgcgcgcaacctcaccatcgtaggcgccaacctgacggtg
ctgcgcgcggccgccttcgccggcggggacggggacggcgaccaggcggcgggcgtgcgc
ctgccgctcctgagcgcgctgcgcctcacgcacaaccacatcgaggtggtggaggacggc
gccttcgacgggctgcccagcctggcggcgctcgacctcagccacaacccgctgcgcgcc
ctgggcggcggcgccttccgcgggctgcccgcgctgcgctcgctgcagctcaaccacgcg
ctggtgcgcggcggccccgcgctgctggccgcgctggacgctgcgctggcaccgctggcc
gagcttcgcctgctgggcctagcgggcaacgcgctgagccgtctgccgccagccgccctg
cgcctggcgcgcctggagcagctggacgtgcgcctcaacgcgctggccggcctggacccc
gacgagctgcgcgcgctggagcgcgatggcggcctccccgggccgcgcctgctgctcgcc
gacaaccccctgcgctgcggctgtgccgcacgccccctgctggcctggctgcgcaacgcc
acggagcgcgtgcccgactcgcggcgcctgcgctgcgccgccccgcgggcgctgctagac
cggccgctactggacctggacggggcgcggcttcgctgcgcggacagcggcgccgacgct
cgcggagaggaggcggaggccgccggcccggagctggaagcctcctacgtgttcttcggg
ctggtgctggcactcatcggcctcatcttcctcatggtgctctacctaaaccgccgcggc
atccagcgctggatgcgcaacctgcgcgaggcgtgccgggaccagatggagggctaccac
taccgctacgagcaggacgccgacccgcgccgcgcgcccgcgcccgccgcgcccgcgggc
tcccgcgccacctccccgggctcggggctctga

>gi568815587r:75166166_75387377|GENSCAN_predicted_peptide_2|644_aa
MGVRVRLLETVCGREAVAASCPTRGKGPHEGFANGNERGVVVVVVEAALTGTQASRVQAL
LSQWKEQLSSTTGLSVHRALNQDPCDDIGPTQVLWGNNTDTGACTFCRVFKKASPNGKLT
VYLGKRDFVDHIDLVDPVDGVVLVDPEYLKERRGPLPPPQACQTTPAPAKPVRPFPYPST
YALGRVYVTLTCAFRYGREDLDVLGLTFRKDLFVANVQSFPPAPEDKKPLTRLQERLIKK
LGEHAYPFTFEIPPNLPCSVTLQPGPEDTGKACGVDYEVKAFCAENLEEKIHKRNSVRLV
IRKVQYAPERPGPQPTAETTRQFLMSDKPLHLEASLDKENLAVLPANPVPSYAPQIYYHG
EPISVNVHVTNNTNKTVKKIKISVRQYADICLFNTAQYKCPVAMEEADDTVAPSSTFCKV
YTLTPFLANNREKRGLALDGKLKHEDTNLASSTLLREGANREILGIIVSYKVKVKLVVSR
GGPWEPREPSQERGGFHFFLGPEEVSSSSSQADRGSEWQNWGWRASFGSTSSDGKTLCSP
RTDRASTSSLTACESAQGSLGLGLCFSDVAVELPFTLMHPKPKEEPPHREVPENETPVDT
NLIELDTNDDDIVFEDFARQRLKGMKDDKEEEEDGTGSPQLNNR

>gi568815587r:75166166_75387377|GENSCAN_predicted_CDS_2|1935_bp
atgggcgttagggtgagactgctggagacggtgtgtgggagagaggctgtggcagcctcc
tgtcccaccagaggaaaaggcccccatgaaggctttgcgaatggaaatgaacgtggggtg
gtggtggtggtggtggaagcagcactaactgggacccaggcgtcccgagtgcaggccctg
ctctctcaatggaaagagcagctgtcatctaccacgggcctctctgttcaccgggcactg
aaccaggacccttgtgatgacattgggcccacccaggtgctctggggaaacaacaccgac
accggggcctgtaccttctgcagagtgttcaagaaggccagtccaaatggaaagctcacc
gtctacctgggaaagcgggactttgtggaccacatcgacctcgtggaccctgtggatggt
gtggtcctggtggatcctgagtatctcaaagagcggagaggtcccctacccccaccccag
gcctgccagactactccagcccccgccaagcctgtcagaccgtttccatacccctccaca
tatgccctggggagagtctatgtgacgctgacctgcgccttccgctatggccgggaggac
ctggatgtcctgggcctgacctttcgcaaggacctgtttgtggccaacgtacagtcgttc
ccaccggcccccgaggacaagaagcccctgacgcggctgcaggaacgcctcatcaagaag
ctgggcgagcacgcttaccctttcacctttgagatccctccaaaccttccatgttctgtg
acactgcagccggggcccgaagacacggggaaggcttgcggtgtggactatgaagtcaaa
gccttctgcgcggagaatttggaggagaagatccacaagcggaattctgtgcgtctggtc
atccggaaggttcagtatgccccagagaggcctggcccccagcccacagccgagaccacc
aggcagttcctcatgtcggacaagcccttgcacctagaagcctctctggataaggagaac
cttgctgtcctcccagccaaccccgtcccttcttatgccccccagatctattaccatgga
gaacccatcagcgtcaacgtccacgtcaccaacaacaccaacaagacggtgaagaagatc
aagatctcagtgcgccagtatgcagacatctgccttttcaacacagctcagtacaagtgc
cctgttgccatggaagaggctgatgacactgtggcacccagctcgacgttctgcaaggtc
tacacactgacccccttcctagccaataaccgagagaagcggggcctcgccttggacggg
aagctcaagcacgaagacacgaacttggcctctagcaccctgttgagggaaggtgccaac
cgtgagatcctggggatcattgtttcctacaaagtgaaagtgaagctggtggtgtctcgg
ggcggcccgtgggaacccagagagccttctcaggaaagaggaggcttccatttctttttg
ggaccagaggaagtctcctcgtccagctcccaggcagaccgaggctccgagtggcagaac
tggggctggagggcatcttttggatctacctcctctgacggcaaaaccctctgcagtcct
cggactgacagggcatcgacatcaagtctcacagcctgtgagtccgctcaaggctcactg
ggtctgggtctctgtttcagcgacgtggccgtggaactgcccttcaccctaatgcacccc
aagcccaaagaggaacccccgcatcgggaagttccagagaacgagacgccagtagatacc
aatctcatagaacttgacacaaatgatgacgacattgtatttgaggactttgctcgccag
agactgaaaggcatgaaggatgacaaggaggaagaggaggatggtaccggctctccacag
ctcaacaacagatag

>gi568815587r:75166166_75387377|GENSCAN_predicted_peptide_3|111_aa
MPSQHLCFLFLGGLLQPLLAAGLRSVPQCQGRLLPPPPLLPVPVVWLGVISPVEGAWALT
PRTSLRPSRTMGDKGTRGALEEVLHCSEFLHPEGRGEHPPALDSGSAAHTV

>gi568815587r:75166166_75387377|GENSCAN_predicted_CDS_3|336_bp
atgcccagccaacatctgtgcttcctcttcctgggcggcctcctgcagcccctgctggcc
gcgggtctccgctcagttccccagtgtcaaggccgtctactgccccctccgccccttctt
cctgtccctgttgtgtggctgggtgttatctctccagtagaaggggcctgggcgctgacg
ccgcggacctccctgcgaccgtcgcggaccatgggcgacaaagggacccgaggggccttg
gaggaggtgctgcattgctcagaattcctgcacccagaaggtcgtggggagcatccccct
gccttggatagtggtagtgccgcccacactgtgtag