Result of FASTA (omim) for pF1KB4911
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB4911, 194 aa
  1>>>pF1KB4911 194 - 194 aa - 194 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 4.8330+/-0.000408; mu= 15.8474+/- 0.026
 mean_var=85.9230+/-17.156, 0's: 0 Z-trim(113.7): 441  B-trim: 324 in 1/51
 Lambda= 0.138363
 statistics sampled from 22603 (23142) to 22603 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.658), E-opt: 0.2 (0.271), width:  16
 Scan time:  5.650

The best scores are:                                      opt bits E(85289)
NP_065724 (OMIM: 612966) ras-related protein Rab-2 ( 194) 1290 267.2 1.2e-71
NP_006859 (OMIM: 605694) ras-related protein Rab-3 ( 195)  897 188.7   5e-48
XP_016881017 (OMIM: 605694) PREDICTED: ras-related ( 248)  829 175.3 7.1e-44
XP_016881018 (OMIM: 605694) PREDICTED: ras-related ( 244)  823 174.1 1.6e-43
NP_004153 (OMIM: 179512) ras-related protein Rab-5 ( 215)  633 136.1 3.9e-32
NP_002859 (OMIM: 179514) ras-related protein Rab-5 ( 215)  615 132.5 4.7e-31
XP_005269108 (OMIM: 179514) PREDICTED: ras-related ( 215)  615 132.5 4.7e-31
NP_001238965 (OMIM: 179514) ras-related protein Ra ( 215)  615 132.5 4.7e-31
XP_005269109 (OMIM: 179514) PREDICTED: ras-related ( 215)  615 132.5 4.7e-31
NP_004574 (OMIM: 604037) ras-related protein Rab-5 ( 216)  615 132.5 4.7e-31
XP_011523393 (OMIM: 604037) PREDICTED: ras-related ( 216)  615 132.5 4.7e-31
NP_958842 (OMIM: 604037) ras-related protein Rab-5 ( 216)  615 132.5 4.7e-31
XP_011523392 (OMIM: 604037) PREDICTED: ras-related ( 216)  615 132.5 4.7e-31
NP_001238968 (OMIM: 604037) ras-related protein Ra ( 249)  615 132.6 5.2e-31
NP_001278977 (OMIM: 179512) ras-related protein Ra ( 201)  506 110.7 1.6e-24
NP_004152 (OMIM: 179508) ras-related protein Rab-1 ( 205)  486 106.7 2.6e-23
NP_005361 (OMIM: 165040) ras-related protein Rab-8 ( 207)  482 105.9 4.5e-23
NP_112243 (OMIM: 612565) ras-related protein Rab-1 ( 201)  479 105.3 6.7e-23
NP_057661 (OMIM: 615852) ras-related protein Rab-6 ( 208)  478 105.1 7.8e-23
NP_002860 (OMIM: 179513) ras-related protein Rab-6 ( 208)  474 104.3 1.4e-22
NP_055814 (OMIM: 612398) ras-related protein Rab-2 ( 225)  474 104.4 1.4e-22
NP_057614 (OMIM: 613532) ras-related protein Rab-8 ( 207)  470 103.5 2.4e-22
NP_001272990 (OMIM: 605693) ras-related protein Ra ( 203)  467 102.9 3.5e-22
NP_001272988 (OMIM: 605693) ras-related protein Ra ( 203)  467 102.9 3.5e-22
NP_001272989 (OMIM: 605693) ras-related protein Ra ( 203)  467 102.9 3.5e-22
NP_055303 (OMIM: 605693) ras-related protein Rab-3 ( 203)  467 102.9 3.5e-22
NP_942599 (OMIM: 179513) ras-related protein Rab-6 ( 208)  464 102.3 5.4e-22
NP_116235 (OMIM: 607466) ras-related protein Rab-2 ( 216)  463 102.1 6.4e-22
NP_004209 (OMIM: 604198) ras-related protein Rab-1 ( 218)  462 101.9 7.4e-22
XP_011526322 (OMIM: 165040) PREDICTED: ras-related ( 215)  461 101.7 8.4e-22
NP_002861 (OMIM: 602672) ras-related protein Rab-1 ( 203)  457 100.9 1.4e-21
NP_067075 (OMIM: 602207,614222) ras-related protei ( 206)  456 100.7 1.6e-21
NP_002856 (OMIM: 179509) ras-related protein Rab-2 ( 212)  451 99.7 3.3e-21
NP_004654 (OMIM: 605570) ras-related protein Rab-1 ( 216)  451 99.7 3.4e-21
NP_002857 (OMIM: 179490) ras-related protein Rab-3 ( 220)  451 99.8 3.4e-21
XP_011526466 (OMIM: 179490) PREDICTED: ras-related ( 220)  451 99.8 3.4e-21
NP_057406 (OMIM: 612673) ras-related protein Rab-1 ( 215)  448 99.1 5.1e-21
NP_004274 (OMIM: 604350) ras-related protein Rab-3 ( 219)  447 99.0 5.9e-21
XP_011511195 (OMIM: 615852) PREDICTED: ras-related ( 195)  443 98.1 9.5e-21
NP_071894 (OMIM: 602206) ras-related protein Rab-1 ( 212)  438 97.1   2e-20
NP_004569 (OMIM: 179511) ras-related protein Rab-4 ( 218)  432 96.0 4.7e-20
NP_057238 (OMIM: 612945) ras-related protein Rab-4 ( 213)  431 95.7 5.3e-20
NP_115520 (OMIM: 612909) ras-related protein Rab-6 ( 254)  430 95.6 6.8e-20
NP_001304844 (OMIM: 612829) ras-related protein Ra ( 225)  429 95.4 7.2e-20
NP_612462 (OMIM: 612829) ras-related protein Rab-3 ( 227)  429 95.4 7.3e-20
NP_065120 (OMIM: 612942) ras-related protein Rab-2 ( 213)  427 94.9 9.2e-20
NP_057215 (OMIM: 612672) ras-related protein Rab-1 ( 200)  423 94.1 1.5e-19
NP_006852 (OMIM: 604199) ras-related protein Rab-3 ( 201)  419 93.3 2.7e-19
NP_570137 (OMIM: 612415) ras-related protein Rab-2 ( 203)  419 93.3 2.7e-19
NP_001026847 (OMIM: 612415) ras-related protein Ra ( 203)  419 93.3 2.7e-19


>>NP_065724 (OMIM: 612966) ras-related protein Rab-22A [  (194 aa)
 initn: 1290 init1: 1290 opt: 1290  Z-score: 1407.3  bits: 267.2 E(85289): 1.2e-71
Smith-Waterman score: 1290; 100.0% identity (100.0% similar) in 194 aa overlap (1-194:1-194)

               10        20        30        40        50        60
pF1KB4 MALRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 MALRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWD
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB4 TAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 TAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKC
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB4 DLIDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIPSTDANLPSGGKGF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 DLIDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIPSTDANLPSGGKGF
              130       140       150       160       170       180

              190    
pF1KB4 KLRRQPSEPKRSCC
       ::::::::::::::
NP_065 KLRRQPSEPKRSCC
              190    

>>NP_006859 (OMIM: 605694) ras-related protein Rab-31 [H  (195 aa)
 initn: 896 init1: 896 opt: 897  Z-score: 983.3  bits: 188.7 E(85289): 5e-48
Smith-Waterman score: 897; 71.8% identity (86.7% similar) in 195 aa overlap (1-194:2-195)

                10        20        30        40        50         
pF1KB4  MALRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIW
        ::.::::::::::::::::::: :::.: :: ::.::::::::::::   :::::::::
NP_006 MMAIRELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIW
               10        20        30        40        50        60

      60        70        80        90       100       110         
pF1KB4 DTAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNK
       ::::::::..::::::::::::.:::::::...: :::.:::::..::: :::.::::::
NP_006 DTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNK
               70        80        90       100       110       120

     120       130       140       150       160       170         
pF1KB4 CDLIDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIPSTDANLPSGGKG
       ::: :.:::  .:::.::.:: :: :::::::::::.:::  :::.::  : .  .:..:
NP_006 CDLSDIREVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQIPPLDPH-ENGNNG
              130       140       150       160       170          

      180       190    
pF1KB4 -FKLRRQPSEPKRSCC
        .:...   . .: ::
NP_006 TIKVEKPTMQASRRCC
     180       190     

>>XP_016881017 (OMIM: 605694) PREDICTED: ras-related pro  (248 aa)
 initn: 822 init1: 822 opt: 829  Z-score: 908.7  bits: 175.3 E(85289): 7.1e-44
Smith-Waterman score: 829; 68.6% identity (84.8% similar) in 191 aa overlap (5-194:60-248)

                                         10        20        30    
pF1KB4                           MALRELKVCLLGDTGVGKSSIVWRFVEDSFDPNI
                                     ...::   :::::::::: :::.: :: ::
XP_016 TDLFPYEVSQYWQDSGQGQGRLHSCGTTRWKMEVCSQ-DTGVGKSSIVCRFVQDHFDHNI
      30        40        50        60         70        80        

           40        50        60        70        80        90    
pF1KB4 NPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEETFS
       .::::::::::::   :::::::::::::::::..::::::::::::.:::::::...: 
XP_016 SPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFY
       90       100       110       120       130       140        

          100       110       120       130       140       150    
pF1KB4 TLKNWVKELRQHGPPNIVVAIAGNKCDLIDVREVMERDAKDYADSIHAIFVETSAKNAIN
       :::.:::::..::: :::.::::::::: :.:::  .:::.::.:: :: ::::::::::
XP_016 TLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAKEYAESIGAIVVETSAKNAIN
      150       160       170       180       190       200        

          160       170        180       190    
pF1KB4 INELFIEISRRIPSTDANLPSGGKG-FKLRRQPSEPKRSCC
       :.:::  :::.::  : .  .:..: .:...   . .: ::
XP_016 IEELFQGISRQIPPLDPH-ENGNNGTIKVEKPTMQASRRCC
      210       220        230       240        

>>XP_016881018 (OMIM: 605694) PREDICTED: ras-related pro  (244 aa)
 initn: 822 init1: 822 opt: 823  Z-score: 902.3  bits: 174.1 E(85289): 1.6e-43
Smith-Waterman score: 823; 70.5% identity (85.8% similar) in 183 aa overlap (13-194:63-244)

                                 10        20        30        40  
pF1KB4                   MALRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASF
                                     :::::::::: :::.: :: ::.:::::::
XP_016 FPYEVSQYWQDSGQGQGRLHSCGTTRWKMEDTGVGKSSIVCRFVQDHFDHNISPTIGASF
             40        50        60        70        80        90  

             50        60        70        80        90       100  
pF1KB4 MTKTVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKE
       :::::   :::::::::::::::::..::::::::::::.:::::::...: :::.::::
XP_016 MTKTVPCGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKE
            100       110       120       130       140       150  

            110       120       130       140       150       160  
pF1KB4 LRQHGPPNIVVAIAGNKCDLIDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEI
       :..::: :::.::::::::: :.:::  .:::.::.:: :: :::::::::::.:::  :
XP_016 LKEHGPENIVMAIAGNKCDLSDIREVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGI
            160       170       180       190       200       210  

            170        180       190    
pF1KB4 SRRIPSTDANLPSGGKG-FKLRRQPSEPKRSCC
       ::.::  : .  .:..: .:...   . .: ::
XP_016 SRQIPPLDPH-ENGNNGTIKVEKPTMQASRRCC
            220        230       240    

>>NP_004153 (OMIM: 179512) ras-related protein Rab-5A is  (215 aa)
 initn: 595 init1: 595 opt: 633  Z-score: 698.0  bits: 136.1 E(85289): 3.9e-32
Smith-Waterman score: 633; 49.2% identity (79.5% similar) in 195 aa overlap (5-194:20-213)

                              10        20        30        40     
pF1KB4                MALRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTK
                          ..:. :::...:::::.: :::. .:    . ::::.:.:.
NP_004 MASRGATRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQ
               10        20        30        40        50        60

          50        60        70        80        90       100     
pF1KB4 TVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQ
       ::  ..   :: :::::::::...::::::::. :::.:::::.::.:.  :::::::..
NP_004 TVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQR
               70        80        90       100       110       120

         110       120       130       140       150       160     
pF1KB4 HGPPNIVVAIAGNKCDLIDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRR
       .. ::::.:..::: :: . : :  ..:..:::.   .:.:::::...:.::.:. :...
NP_004 QASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKK
              130       140       150       160       170       180

         170           180       190       
pF1KB4 IPSTDANLPSG----GKGFKLRRQPSEPKRS-CC  
       .:... . :..    :.:  :  .:..: :. ::  
NP_004 LPKNEPQNPGANSARGRGVDLT-EPTQPTRNQCCSN
              190       200        210     

>>NP_002859 (OMIM: 179514) ras-related protein Rab-5B is  (215 aa)
 initn: 611 init1: 574 opt: 615  Z-score: 678.5  bits: 132.5 E(85289): 4.7e-31
Smith-Waterman score: 615; 49.0% identity (78.1% similar) in 196 aa overlap (5-194:20-213)

                              10        20        30        40     
pF1KB4                MALRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTK
                          ..:. :::...:::::.: :::. .:    . ::::.:.:.
NP_002 MTSRSTARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ
               10        20        30        40        50        60

          50        60        70        80        90       100     
pF1KB4 TVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQ
       .:  ..   :: :::::::::...::::::::. :::.:::::..:::.  :.:::::..
NP_002 SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQR
               70        80        90       100       110       120

         110       120       130       140       150       160     
pF1KB4 HGPPNIVVAIAGNKCDLIDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRR
       .. :.::.:.:::: :: . : :  ..:. :::.   .:.:::::.:.:.:.::. :...
NP_002 QASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK
              130       140       150       160       170       180

         170             180       190      
pF1KB4 IPSTDA-NLPSGG-----KGFKLRRQPSEPKRSCC  
       .:...  ::  ::     .:  :..: .. : .::  
NP_002 LPKSEPQNL--GGAAGRSRGVDLHEQSQQNKSQCCSN
                190       200       210     

>>XP_005269108 (OMIM: 179514) PREDICTED: ras-related pro  (215 aa)
 initn: 611 init1: 574 opt: 615  Z-score: 678.5  bits: 132.5 E(85289): 4.7e-31
Smith-Waterman score: 615; 49.0% identity (78.1% similar) in 196 aa overlap (5-194:20-213)

                              10        20        30        40     
pF1KB4                MALRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTK
                          ..:. :::...:::::.: :::. .:    . ::::.:.:.
XP_005 MTSRSTARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ
               10        20        30        40        50        60

          50        60        70        80        90       100     
pF1KB4 TVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQ
       .:  ..   :: :::::::::...::::::::. :::.:::::..:::.  :.:::::..
XP_005 SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQR
               70        80        90       100       110       120

         110       120       130       140       150       160     
pF1KB4 HGPPNIVVAIAGNKCDLIDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRR
       .. :.::.:.:::: :: . : :  ..:. :::.   .:.:::::.:.:.:.::. :...
XP_005 QASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK
              130       140       150       160       170       180

         170             180       190      
pF1KB4 IPSTDA-NLPSGG-----KGFKLRRQPSEPKRSCC  
       .:...  ::  ::     .:  :..: .. : .::  
XP_005 LPKSEPQNL--GGAAGRSRGVDLHEQSQQNKSQCCSN
                190       200       210     

>>NP_001238965 (OMIM: 179514) ras-related protein Rab-5B  (215 aa)
 initn: 611 init1: 574 opt: 615  Z-score: 678.5  bits: 132.5 E(85289): 4.7e-31
Smith-Waterman score: 615; 49.0% identity (78.1% similar) in 196 aa overlap (5-194:20-213)

                              10        20        30        40     
pF1KB4                MALRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTK
                          ..:. :::...:::::.: :::. .:    . ::::.:.:.
NP_001 MTSRSTARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ
               10        20        30        40        50        60

          50        60        70        80        90       100     
pF1KB4 TVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQ
       .:  ..   :: :::::::::...::::::::. :::.:::::..:::.  :.:::::..
NP_001 SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQR
               70        80        90       100       110       120

         110       120       130       140       150       160     
pF1KB4 HGPPNIVVAIAGNKCDLIDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRR
       .. :.::.:.:::: :: . : :  ..:. :::.   .:.:::::.:.:.:.::. :...
NP_001 QASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK
              130       140       150       160       170       180

         170             180       190      
pF1KB4 IPSTDA-NLPSGG-----KGFKLRRQPSEPKRSCC  
       .:...  ::  ::     .:  :..: .. : .::  
NP_001 LPKSEPQNL--GGAAGRSRGVDLHEQSQQNKSQCCSN
                190       200       210     

>>XP_005269109 (OMIM: 179514) PREDICTED: ras-related pro  (215 aa)
 initn: 611 init1: 574 opt: 615  Z-score: 678.5  bits: 132.5 E(85289): 4.7e-31
Smith-Waterman score: 615; 49.0% identity (78.1% similar) in 196 aa overlap (5-194:20-213)

                              10        20        30        40     
pF1KB4                MALRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTK
                          ..:. :::...:::::.: :::. .:    . ::::.:.:.
XP_005 MTSRSTARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ
               10        20        30        40        50        60

          50        60        70        80        90       100     
pF1KB4 TVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQ
       .:  ..   :: :::::::::...::::::::. :::.:::::..:::.  :.:::::..
XP_005 SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQR
               70        80        90       100       110       120

         110       120       130       140       150       160     
pF1KB4 HGPPNIVVAIAGNKCDLIDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRR
       .. :.::.:.:::: :: . : :  ..:. :::.   .:.:::::.:.:.:.::. :...
XP_005 QASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK
              130       140       150       160       170       180

         170             180       190      
pF1KB4 IPSTDA-NLPSGG-----KGFKLRRQPSEPKRSCC  
       .:...  ::  ::     .:  :..: .. : .::  
XP_005 LPKSEPQNL--GGAAGRSRGVDLHEQSQQNKSQCCSN
                190       200       210     

>>NP_004574 (OMIM: 604037) ras-related protein Rab-5C is  (216 aa)
 initn: 581 init1: 581 opt: 615  Z-score: 678.5  bits: 132.5 E(85289): 4.7e-31
Smith-Waterman score: 615; 47.9% identity (77.8% similar) in 194 aa overlap (5-194:21-214)

                               10        20        30        40    
pF1KB4                 MALRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMT
                           ..:. :::...:::::.: :::. .:    . ::::.:.:
NP_004 MAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
               10        20        30        40        50        60

           50        60        70        80        90       100    
pF1KB4 KTVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELR
       .::  ..   :: :::::::::...::::::::. :::.:::::. .::.  :::::::.
NP_004 QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQ
               70        80        90       100       110       120

          110       120       130       140       150       160    
pF1KB4 QHGPPNIVVAIAGNKCDLIDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISR
       ... ::::.:.:::: :: . : :  ..:. :::.   .:.:::::.:.:.::.:. :..
NP_004 RQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
              130       140       150       160       170       180

          170           180       190      
pF1KB4 RIPSTD----ANLPSGGKGFKLRRQPSEPKRSCC  
       ..:...    .. :. ..:  :...    . .::  
NP_004 KLPKNEPQNATGAPGRNRGVDLQENNPASRSQCCSN
              190       200       210      




194 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 03:18:01 2016 done: Fri Nov  4 03:18:02 2016
 Total Scan time:  5.650 Total Display time: -0.020

Function used was FASTA [36.3.4 Apr, 2011]
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