GENSCAN 1.0	Date run:  4-Nov-116	Time: 03:11:56

Sequence gi568815576f:32702002_32959374 : 257373 bp : 45.70% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 PlyA -     27     22    6                               1.05
 1.03 Term -   2378   2302   77  0  2   92   38    60 0.306  -0.60
 1.02 Intr -   9855   9775   81  1  0   97   82     9 0.274   0.81
 1.01 Init -  11452  11344  109  1  1   60   51   104 0.423   4.28
 1.00 Prom -  14842  14803   40                              -4.06

 2.00 Prom +  26121  26160   40                              -1.86
 2.01 Init +  30582  30706  125  2  2   96   99    40 0.539   5.54
 2.02 Intr +  42569  42647   79  2  1   98   74    25 0.297   1.65
 2.03 Intr +  42672  42707   36  2  0  115   99    48 0.496   7.06
 2.04 Intr +  44601  44628   28  2  1   99   92    21 0.477   1.29
 2.05 Intr +  52675  52757   83  2  2   85  105    70 0.288   7.76
 2.06 Term +  57660  58268  609  2  0   50   47   431 0.805  29.70
 2.07 PlyA +  64754  64759    6                               1.05

 3.08 PlyA -  65690  65685    6                               1.05
 3.07 Term -  69322  69125  198  1  0   61   47    82 0.234  -1.20
 3.06 Intr -  73405  73280  126  1  0   98   77    12 0.342   1.98
 3.05 Intr -  78273  78169  105  0  0   88   86    61 0.834   6.31
 3.04 Intr -  78751  78697   55  0  1   56  119    20 0.527   0.88
 3.03 Intr -  85878  85810   69  2  0  150   53    54 0.061   6.40
 3.02 Intr -  86894  86891    4  0  1  101   94     0 0.032  -5.91
 3.01 Init -  88857  88761   97  0  1   67   67    92 0.558   3.53
 3.00 Prom -  89292  89253   40                              -3.86

 4.00 Prom +  95775  95814   40                              -3.76
 4.01 Init + 100001 100121  121  1  1   88  111   168 0.182  17.47
 4.02 Intr + 116685 116811  127  1  1   59   91    51 0.328   2.24
 4.03 Intr + 121306 121367   62  1  2   92   68    41 0.242   0.88
 4.04 Intr + 128575 128683  109  2  1  119   21    57 0.190   1.44
 4.05 Intr + 128814 128865   52  0  1   67   21   104 0.034   0.51
 4.06 Intr + 147291 147339   49  2  1  104  116   -11 0.407   1.55
 4.07 Intr + 147451 147533   83  2  2  138  100   156 0.971  21.16
 4.08 Intr + 155248 155359  112  0  1   70   95   194 0.980  18.25
 4.09 Intr + 156016 156137  122  2  2  113  121   177 0.999  23.71
 4.10 Term + 157179 157376  198  2  0   80   53   333 0.992  26.40
 4.11 PlyA + 158932 158937    6                               1.05

 5.06 PlyA - 159782 159777    6                               1.05
 5.05 Term - 162187 162155   33  1  0   84   40    20 0.413  -5.61
 5.04 Intr - 163003 162914   90  1  0   94  101    52 0.865   7.29
 5.03 Intr - 167153 166965  189  2  0   51   66   273 0.601  21.18
 5.02 Intr - 171618 171463  156  0  0   69   51   135 0.869   8.11
 5.01 Init - 172791 172645  147  0  0   81   -2    88 0.269  -0.73
 5.00 Prom - 177324 177285   40                              -1.96

 6.00 Prom + 184524 184563   40                              -4.66
 6.01 Init + 191390 191392    3  1  0   98   91     0 0.236   1.30
 6.02 Intr + 198904 198984   81  0  0   75   69    62 0.444   2.83
 6.03 Intr + 202643 202776  134  1  2   86   75    24 0.514   0.34
 6.04 Intr + 209635 209764  130  1  1   95   56   102 0.980   8.40
 6.05 Term + 216130 216243  114  0  0  101   42   117 0.952   6.97
 6.06 PlyA + 216488 216493    6                               1.05

 7.04 PlyA - 219128 219123    6                               1.05
 7.03 Term - 222541 222463   79  0  1   72   42    97 0.710   0.74
 7.02 Intr - 229480 229389   92  1  2  102  107    83 0.851  10.39
 7.01 Init - 235495 235490    6  1  0   84   87     0 0.094   0.38
 7.00 Prom - 237875 237836   40                              -5.16

 8.00 Prom + 238358 238397   40                              -5.96
 8.01 Sngl + 240488 240706  219  1  0   88   42   205 0.982  11.06
 8.02 PlyA + 241366 241371    6                               1.05

 9.00 Prom + 241902 241941   40                              -3.76
 9.01 Sngl + 242445 243308  864  2  0   42   41   259 0.934  12.48
 9.02 PlyA + 243455 243460    6                               1.05

10.00 Prom + 244219 244258   40                              -2.46
10.01 Init + 255312 255419  108  2  0   37   76    86 0.023   0.77
10.02 Term + 255880 256029  150  0  0  115   51    58 0.031   2.71
10.03 PlyA + 257038 257043    6                              -0.45


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  61811  61753   59  0  2  134   48    16 0.911   0.05
S.002 Init -  64975  64921   55  1  1   98  113     4 0.918   5.35


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815576f:32702002_32959374|GENSCAN_predicted_peptide_1|88_aa
MIFSNMLEPTEGLHEKQSKPLKVYLTTEELGAENLKYQLLEASISEKMFELGIIQEMQIL
TKLGTWMELEAIIFSKLMQEQKTKYYMF

>gi568815576f:32702002_32959374|GENSCAN_predicted_CDS_1|267_bp
atgatcttcagcaatatgctggagcccactgaaggcttgcatgagaagcaaagcaagcct
ctgaaagtgtacctgaccacggaggaactaggggcagaaaatttaaaataccaactcctg
gaagcaagcatttccgagaagatgtttgaacttggtattattcaagaaatgcaaattcta
acaaaattaggaacatggatggagctggaggccattatctttagcaaactaatgcaggaa
cagaaaaccaaatactacatgttctga

>gi568815576f:32702002_32959374|GENSCAN_predicted_peptide_2|319_aa
MDESFNLPGHRNFICKVRINSVYISYEVNITACLTDDDVSHRLISKRRSNANLGLVDPQV
HAFTQHATDSVNPEKQLTVSEAFSDSSSTASPQTFPEHTIQSYTLMPLLLRHLLKGKPAP
TAPPASTHAPPASTHPPSASTHPPPASTHPAPVSTHGTPSQHPRTTSQHPPTISQHPPTT
SQYPPTPSQHPPTSSQYPPTSSQYPRTRSQHPPTSSQHPPTPSQYPPTPSQHPPTSSQYP
PTPSQHPPTSSQYPPTTSQHPRAPSQRPPTSSQHPCIRSQHPLTPQPAPTYPPASTHPPP
ANSHAPTASTHAGLRPFLD

>gi568815576f:32702002_32959374|GENSCAN_predicted_CDS_2|960_bp
atggatgagtcattcaatctccctggacatcgtaatttcatctgtaaagtgaggattaac
agtgtctacatatcctatgaggtaaatattactgcctgcttgacagatgatgatgtttca
cacaggttaataagtaagagacggtcaaatgcaaatttgggtctagtggaccctcaagtc
catgctttcacccaacatgctactgactctgtcaacccggagaagcagctcactgtgtcg
gaagccttctctgattcttccagcacagcaagtcctcagacgttccctgagcataccata
cagtcctacaccttgatgcctttgctccttcggcacttgctgaaagggaagccagcaccc
acggcacccccagccagcacccacgcaccaccagccagcacccacccaccatcagccagc
acccacccacccccagccagcacccacccagccccagtcagcacccacggcacccccagc
cagcacccacgcaccaccagccagcacccacccaccatcagccagcacccacccaccacc
agccagtacccacccacccccagccagcacccaccaaccagcagccagtacccacccacc
agcagccagtacccacgcacccgcagccagcacccacccaccagcagccagcacccaccc
acccccagccagtacccacccacccccagccagcacccacccaccagcagccagtaccca
cccacccccagccagcacccacccaccagcagccagtacccacccaccaccagccagcac
ccacgtgcccccagccagcgcccacccaccagcagccagcacccatgcatccgcagccag
cacccactcaccccccagccagcacccacgtaccccccagccagcacccacccgccccca
gccaacagccacgcaccaacagccagcacccatgcaggcctgcggcccttccttgattga

>gi568815576f:32702002_32959374|GENSCAN_predicted_peptide_3|217_aa
MVKSKVLETPVLHWSWLTLACQSLLLYIREFAGRSCHGQSDPSNSAASSSDITFSGRIKK
LRHRKFSRLSKVMQLGQLQPVKFQHSSAKHRPDMASHTSELAAASFVTRQVFVAQMLLRT
ELCPPKIHVEASTSSAAVFSDRACKEVVRLDKNFNISMVDNFRGQGWLYTMEYYAAIKKN
EFMSFAGTWMKLETILLSKLTQEQKTKHYMLSPTSGS

>gi568815576f:32702002_32959374|GENSCAN_predicted_CDS_3|654_bp
atggtgaagagcaaggttctagagaccccagtgctgcactggagctggctcaccctggct
tgtcagagcctattgttatacattcgggaatttgcaggcaggtcttgccatggccagtca
gatccttctaattctgcagcttccagctcagatattaccttctcggggaggataaagaaa
ctaaggcacaggaagttcagtagattgtccaaggtcatgcagctgggccagcttcagccc
gtgaaattccagcacagttcagcaaagcacagaccagacatggcgtcccacaccagtgag
ctggcagctgcttcctttgtaaccagacaggtgtttgtggctcagatgctgctaaggact
gaattatgtccccccaaaattcatgttgaagcctcaacctccagtgcagctgtatttagt
gatagggcctgtaaggaggtagttagattagacaagaattttaacatctccatggtggac
aacttcagagggcaaggctggttatataccatggaatactatgcagccataaaaaagaat
gagttcatgtcctttgcagggacatggatgaagctggaaaccatccttctcagcaaacta
acacaggaacagaaaaccaaacactacatgttgtcacccacaagtgggagttga

>gi568815576f:32702002_32959374|GENSCAN_predicted_peptide_4|344_aa
MTPWLGLIVLLGSWSLGDWGAEACTCSPSHPQDAFCNSDIALAPLTAVRKADVTVAGLGG
KSQDKTASTWIWRRGSDWQEIRRSLQEMGPATENAARDVSVGSSQVMHRQLGIDMRVKGI
LVGKHQRDPQGHPPAPAIPLGFRKVFPANPADGLRWHGIPTLVNTIIYSSWLQVIRAKVV
GKKLVKEGPFGTLVYTIKQMKMYRGFTKMPHVQYIHTEASESLCGLKLEVNKYQYLLTGR
VYDGKMYTGLCNFVERWDQLTLSQRKGLNYRYHLGCNCKIKSCYYLPCFVTSKNECLWTD
MLSNFGYPGYQSKHYACIRQKGGYCSWYRGWAPPDKSIINATDP

>gi568815576f:32702002_32959374|GENSCAN_predicted_CDS_4|1035_bp
atgaccccttggctcgggctcatcgtgctcctgggcagctggagcctgggggactggggc
gccgaggcgtgcacatgctcgcccagccacccccaggacgccttctgcaactccgacatc
gctcttgcaccattaactgcagtcagaaaagctgatgtcactgtggccggcctaggggga
aagtctcaggataaaactgcttccacctggatctggagaaggggaagtgactggcaagag
attcgcaggtccctgcaggagatgggacctgccacagagaatgccgcaagggatgtttct
gttgggagctcacaggtcatgcacaggcagctgggaatagatatgcgagttaaaggaatt
ctcgttggaaaacaccagagggatccacagggccacccccccgcccccgcaataccactt
ggattccgcaaggtgtttcctgcaaatcctgctgatggtcttcgctggcacggaattccc
actcttgtaaacacaatcatctattccagttggctccaagtgatccgggccaaggtggtg
gggaagaagctggtaaaggaggggcccttcggcacgctggtctacaccatcaagcagatg
aagatgtaccgaggcttcaccaagatgccccatgtgcagtacatccatacggaagcttcc
gagagtctctgtggccttaagctggaggtcaacaagtaccagtacctgctgacaggtcgc
gtctatgatggcaagatgtacacggggctgtgcaacttcgtggagaggtgggaccagctc
accctctcccagcgcaaggggctgaactatcggtatcacctgggttgtaactgcaagatc
aagtcctgctactacctgccttgctttgtgacttccaagaacgagtgtctctggaccgac
atgctctccaatttcggttaccctggctaccagtccaaacactacgcctgcatccggcag
aagggcggctactgcagctggtaccgaggatgggcccccccggataaaagcatcatcaat
gccacagacccctga

>gi568815576f:32702002_32959374|GENSCAN_predicted_peptide_5|204_aa
MDVRKSGAFAGLAGISSGCDGSQHVNKISMNITLCQPGSWGPGDSYEIVTSYSPGKCGSL
IREDFRMGSVSRKRRSSGYRADKTSTVHYTPNNEGTFIQSQCGNTAVGFLSRSFKPDFIL
VRQHAYSMALGEDYRSLVIGLQYGGLPAVNSLYSVYNFCSKPWVFSQLIKIFHSLGPEKF
PLVEQTFFPNHKPMGMRLWEQNNE

>gi568815576f:32702002_32959374|GENSCAN_predicted_CDS_5|615_bp
atggacgtcagaaagtctggagccttcgcaggcctggctggaatcagctctgggtgtgat
gggtctcagcatgtgaacaaaatcagcatgaacatcaccctttgccaacctggctcttgg
ggaccaggggacagttatgaaatagtgaccagttacagcccaggaaaatgtggttctctg
atcagagaggatttccgcatgggctctgtttctagaaaaaggaggagttctgggtacaga
gcagataaaaccagcacagtccactacacccccaacaacgagggcacattcattcagtcg
cagtgtggtaacactgctgttggctttctcagcagatccttcaagccagacttcatcctg
gtccgccagcatgcctacagcatggccctgggggaagactaccgcagcctggtcatcggc
ctgcagtatggagggctgcctgctgtcaactctctctactccgtctacaacttctgcagc
aagccctgggtgttctctcagctcattaagatcttccattccctgggtcctgagaagttc
ccgcttgtggagcaaacatttttccccaaccataagccaatgggaatgcgtctttgggaa
cagaataatgaatag

>gi568815576f:32702002_32959374|GENSCAN_predicted_peptide_6|153_aa
MTISYMTAAEIFGLLMQQQHPIDVSSIQAEKSPYAYRVLGFYKAFEQVMGQFLPSTPRNT
WTVDSCPLWEAFSSEGGNKRWLHGSPRETEREPNHHVVNKCCDRSTAELLLHRIKKSCRI
LIHAKSRLVMNAFSKDLGIVPGAGATIRKNSLT

>gi568815576f:32702002_32959374|GENSCAN_predicted_CDS_6|462_bp
atgactatcagctacatgacggcagcggaaatatttggtttactgatgcagcaacagcat
ccaatagatgtatctagcatacaggcagaaaaatctccttatgcatatagagtcttggga
ttttataaagcatttgaacaagtaatgggacagtttcttccttccactccacgcaacact
tggactgtggactcttgtccactgtgggaagctttcagctccgagggtggtaataaaaga
tggctgcacggctctccccgggaaactgaacgggagccaaaccatcatgtggtgaacaaa
tgctgtgatcgctcaactgcagagctgctgctgcaccgtattaaaaagagttgtaggatt
cttattcatgcaaagagtcggctggtcatgaatgccttcagcaaagatttaggcattgtg
ccaggtgctggggccacaattcggaaaaacagcttaacttga

>gi568815576f:32702002_32959374|GENSCAN_predicted_peptide_7|58_aa
MIAEFSELNLAAYVTGGCMVDMQVVRNGTKVVRFSLSSKDVNKLLDAADAAVGRSHFE

>gi568815576f:32702002_32959374|GENSCAN_predicted_CDS_7|177_bp
atgattgctgaattctcagagttgaacctagctgcctatgtgaccgggggctgcatggtg
gacatgcaggtcgtgagaaatgggaccaaagtggtgaggttcagtttgagcagcaaggat
gtgaacaagctcctggatgctgctgatgctgctgttggaagatcacattttgagtag

>gi568815576f:32702002_32959374|GENSCAN_predicted_peptide_8|72_aa
MGKKQSRKAENSRNQSASSPPKERSFSPAMEQSWMENDFDELSEEGFRRSNFSELKEEVQ
THRKEAKTLKKD

>gi568815576f:32702002_32959374|GENSCAN_predicted_CDS_8|219_bp
atggggaaaaaacagagcagaaaagctgaaaattctagaaatcagagcgcctcttctcct
ccaaaggaacgcagcttctcaccagcaatggaacaaagctggatggagaatgactttgac
gagttgagtgaagaaggcttcagacgatcaaacttctctgagctaaaggaggaagttcaa
acccatcgcaaagaagctaaaaccttgaaaaaagattag

>gi568815576f:32702002_32959374|GENSCAN_predicted_peptide_9|287_aa
MIISIDAEKAFDKIQQPFMLKTLNKLGIDGMYLKIIRAIYDKPTANIILNGQKLEAFPLK
TGISQGCPLSPLLFNTVLEVLARAIRQEKEIKGIQLGKEEVKLSLFADDMIVYLENPIVS
AQNLLKLISNSAVSGYKINMQKSQAFLYTNNRQTEGQIMSKLPFTIASKRIKYLGIQLTR
DVKDLFKENYKPLLNEIKEDTNKWKNIPCSWIGRINIVKMAILPKAIYGFNAIPIKLPMT
FFTELEITTLKFIWNQKRAHTAKTILSERTKLEASRYLTLNYTTRLQ

>gi568815576f:32702002_32959374|GENSCAN_predicted_CDS_9|864_bp
atgattatctcaatagatgcagaaaaggcctttgacaaaattcaacagcccttcatgcta
aaaactctcaataaattaggtattgatgggatgtatctcaaaataataagagctatttat
gacaaacccacagccaatatcatactgaatggacaaaaactggaagcattccccttgaaa
actggcataagccagggatgccctctctcaccactcctattcaacacagtgttggaagtt
ctggccagggcaatcaggcaggagaaagaaataaagggcattcaattaggaaaagaggaa
gtcaaattgtccctgtttgcagatgacatgattgtatatttagaaaaccccatcgtctca
gcccaaaatctccttaagctgataagcaattcagcagtctcaggatacaaaatcaatatg
caaaaatcacaagcattcttatacaccaataacagacaaacagagggccaaatcatgagt
aaactcccattcacaattgcttcaaagagaataaaatacctaggaatccaacttacaagg
gatgtgaaggatctcttcaaggagaactacaaaccactgctcaacgaaataaaggaggac
acaaacaaatggaagaacattccatgctcatggataggaagaatcaatattgtgaaaatg
gccatactgcccaaggcaatttatggattcaatgccatccccattaagctaccaatgact
ttcttcacagaactggaaataactactttaaagttcatatggaaccaaaaaagagcccac
actgccaagacaatcctaagcgaaagaacaaaactggaggcatcacgctacctgacttta
aactatactacaaggctacagtaa

>gi568815576f:32702002_32959374|GENSCAN_predicted_peptide_10|85_aa
MQEADSCSLGMRGLAGLVLPQENEHRRDAGWLSTSPGLPWFHPSMTQIELRANPNLISKT
GTARDSVREKNPPVANAFRIKKQRQ

>gi568815576f:32702002_32959374|GENSCAN_predicted_CDS_10|258_bp
atgcaggaagcagactcgtgctctctgggaatgagaggcctggccggacttgtgcttcca
caagaaaatgaacatcgccgggatgcaggatggcttagcacttctcctgggctaccgtgg
ttccaccccagcatgactcagatagagcttcgcgctaacccaaacctaatctccaaaacg
gggactgcaagggacagtgtcagggaaaagaacccacctgtggcaaatgcattccgcatc
aagaagcaaaggcaatga