Result of FASTA (omim) for pF1KB4637
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB4637, 300 aa
  1>>>pF1KB4637 300 - 300 aa - 300 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.9477+/-0.000302; mu= 8.9382+/- 0.019
 mean_var=122.5787+/-24.237, 0's: 0 Z-trim(121.2): 20  B-trim: 0 in 0/51
 Lambda= 0.115842
 statistics sampled from 37369 (37400) to 37369 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.788), E-opt: 0.2 (0.439), width:  16
 Scan time:  7.540

The best scores are:                                      opt bits E(85289)
NP_001271446 (OMIM: 612910) PHD finger protein 23  ( 336)  434 82.9 9.3e-16
NP_001271447 (OMIM: 612910) PHD finger protein 23  ( 399)  434 83.0 1.1e-15
NP_077273 (OMIM: 612910) PHD finger protein 23 iso ( 403)  434 83.0 1.1e-15
XP_011527145 (OMIM: 610335) PREDICTED: PHD finger  ( 609)  205 44.8  0.0005
XP_016883360 (OMIM: 610335) PREDICTED: PHD finger  ( 609)  205 44.8  0.0005
XP_005260478 (OMIM: 610335) PREDICTED: PHD finger  ( 609)  205 44.8  0.0005
XP_011527146 (OMIM: 610335) PREDICTED: PHD finger  ( 609)  205 44.8  0.0005
XP_016883358 (OMIM: 610335) PREDICTED: PHD finger  ( 896)  205 44.9 0.00068
XP_016883359 (OMIM: 610335) PREDICTED: PHD finger  ( 896)  205 44.9 0.00068
XP_016883357 (OMIM: 610335) PREDICTED: PHD finger  ( 957)  205 45.0 0.00072
NP_057520 (OMIM: 610335) PHD finger protein 20 [Ho (1012)  205 45.0 0.00075
XP_016883356 (OMIM: 610335) PREDICTED: PHD finger  (1012)  205 45.0 0.00075
XP_016883353 (OMIM: 610335) PREDICTED: PHD finger  (1012)  205 45.0 0.00075
XP_016883354 (OMIM: 610335) PREDICTED: PHD finger  (1012)  205 45.0 0.00075
XP_016883355 (OMIM: 610335) PREDICTED: PHD finger  (1012)  205 45.0 0.00075


>>NP_001271446 (OMIM: 612910) PHD finger protein 23 isof  (336 aa)
 initn: 585 init1: 395 opt: 434  Z-score: 403.8  bits: 82.9 E(85289): 9.3e-16
Smith-Waterman score: 569; 36.8% identity (56.1% similar) in 321 aa overlap (10-286:17-326)

                      10        20        30        40        50   
pF1KB4        MDSDSCAAAFHPEEYSPSCKRRRTVEDFNKFCTFVLAYAGYIPYPKEELPLRS
                       ..::   :  :::::.:::::::.:::::::::: :..: :  .
NP_001 MLEAMAEPSPEDPPPTLKPETQPPE-KRRRTIEDFNKFCSFVLAYAGYIP-PSKEAPDSA
               10        20         30        40         50        

            60         70                   80        90           
pF1KB4 SPSPANSTAGTI-DSDGWDAG--FSDI---------ASSVPLPVSDRCFSH---------
       .     .   .. : ::  ..  .:           :. .:.:.:.  .::         
NP_001 TLLEKMKLKDSLFDLDGPKVASPLSPTSLTHTSRPPAALTPVPLSQGDLSHPPRKKDRKN
       60        70        80        90       100       110        

                    100       110       120             130        
pF1KB4 --LQPT------LLQRAKPSNFLLDRKKTDKLKKKKKRKRRDSD------APGKEGYRGG
         : :       .:.: .:.    : .: ...::.:::: . ..       ::      .
NP_001 RKLGPGAGAGFGVLRRPRPTP--GDGEKRSRIKKSKKRKLKKAERGDRLPPPGPPQAPPS
      120       130         140       150       160       170      

      140       150       160         170       180       190      
pF1KB4 LLKLEAADPYVETPTSPTLQDI--PQAPSDPCSGWDSDTPSSGSCATVSPDQVKEIKTEG
           :  .   :      .  .   .::  :      ..:     ::: :. :    .:.
NP_001 DTDSEEEEEEEEEEEEEEMATVVGGEAPV-PVLPTPPEAPRPP--ATVHPEGVPPADSES
        180       190       200        210         220       230   

        200       210              220       230       240         
pF1KB4 KRTIVRQGKQVVFRDEDSTGN-------DEDIMVDSDDDSWDLVTCFCMKPFAGRPMIEC
       :..    :.  . .: :....       ::::::.: ::::::.::.: :::::::::::
NP_001 KEV----GSTETSQDGDASSSEGEMRVMDEDIMVESGDDSWDLITCYCRKPFAGRPMIEC
               240       250       260       270       280         

     250       260       270       280       290       300
pF1KB4 NECHTWIHLSCAKIRKSNVPEVFVCQKCRDSKFDIRRSNRSRTGSRKLFLD
       . : ::::::::::.:.:::. : ::::.. . . ::              
NP_001 SLCGTWIHLSCAKIKKTNVPDFFYCQKCKELRPEARRLGGPPKSGEP    
     290       300       310       320       330          

>>NP_001271447 (OMIM: 612910) PHD finger protein 23 isof  (399 aa)
 initn: 667 init1: 395 opt: 434  Z-score: 402.8  bits: 83.0 E(85289): 1.1e-15
Smith-Waterman score: 435; 33.7% identity (53.9% similar) in 258 aa overlap (39-286:158-389)

       10        20        30        40        50        60        
pF1KB4 AFHPEEYSPSCKRRRTVEDFNKFCTFVLAYAGYIPYPKEELPLRSSPSPANSTAGTIDSD
                                     :.  : :  .  :   :   .     . . 
NP_001 KLKDSLFDLDGPKVASPLSPTSLTHTSRPPAALTPVPLSQGDLSHPPRKKDRKNRKL-GP
       130       140       150       160       170       180       

       70        80        90       100       110       120        
pF1KB4 GWDAGFSDIASSVPLPVSDRCFSHLQPTLLQRAKPSNFLLDRKKTDKLKKKKKRKRRDSD
       :  :::. .    : : . .  :... .  .. : .      .. :.:      .   ::
NP_001 GAGAGFGVLRRPRPTPGDGEKRSRIKKSKKRKLKKA------ERGDRLPPPGPPQAPPSD
        190       200       210       220             230       240

      130       140          150       160       170       180     
pF1KB4 APGKEGYRGGLLKLEAADPYV---ETPTSPTLQDIPQAPSDPCSGWDSDTPSSGSCATVS
       . ..:  .    . :     :   :.:. :.:   :.::  :              ::: 
NP_001 TDSEEEEEEEEEEEEEEMATVVGGEAPV-PVLPTPPEAPRPP--------------ATVH
              250       260        270       280                   

         190       200       210              220       230        
pF1KB4 PDQVKEIKTEGKRTIVRQGKQVVFRDEDSTGN-------DEDIMVDSDDDSWDLVTCFCM
       :. :    .:.:..    :.  . .: :....       ::::::.: ::::::.::.: 
NP_001 PEGVPPADSESKEV----GSTETSQDGDASSSEGEMRVMDEDIMVESGDDSWDLITCYCR
         290           300       310       320       330       340 

      240       250       260       270       280       290        
pF1KB4 KPFAGRPMIECNECHTWIHLSCAKIRKSNVPEVFVCQKCRDSKFDIRRSNRSRTGSRKLF
       :::::::::::. : ::::::::::.:.:::. : ::::.. . . ::            
NP_001 KPFAGRPMIECSLCGTWIHLSCAKIKKTNVPDFFYCQKCKELRPEARRLGGPPKSGEP  
             350       360       370       380       390           

      300
pF1KB4 LD

>--
 initn: 287 init1: 185 opt: 257  Z-score: 242.9  bits: 53.4 E(85289): 8.6e-07
Smith-Waterman score: 257; 38.6% identity (56.2% similar) in 153 aa overlap (10-156:13-148)

                  10        20        30        40          50     
pF1KB4    MDSDSCAAAFHPEEYSPSCKRRRTVEDFNKFCTFVLAYAGYIPYPKEE--LPLRSSP
                   ..::   :  :::::.:::::::.::::::::::  :::   :  .: 
NP_001 MPGDCRRDPPPTLKPETQPPE-KRRRTIEDFNKFCSFVLAYAGYIPPSKEESDWPASGSS
               10        20         30        40        50         

          60        70        80            90       100       110 
pF1KB4 SPANSTAGTIDSDGWDAGFSDIASSVPL----PVSDRCFSHLQPTLLQRAKPSNFLLDRK
       ::  . ... ::::::.. ::. .   .      : :  ..  ::  : . : . .   .
NP_001 SPLRGESAA-DSDGWDSAPSDLRTIQTFVKKAKSSKRRAAQAGPT--QPGPPRSTFSRLQ
      60         70        80        90       100         110      

             120       130       140       150       160       170 
pF1KB4 KTDKLKKKKKRKRRDSDAPGKEGYRGGLLKLEAADPYVETPTSPTLQDIPQAPSDPCSGW
         :.    .: : .::           :. :..  : : .: :::               
NP_001 APDSATLLEKMKLKDS-----------LFDLDG--PKVASPLSPTSLTHTSRPPAALTPV
        120       130                    140       150       160   

             180       190       200       210       220       230 
pF1KB4 DSDTPSSGSCATVSPDQVKEIKTEGKRTIVRQGKQVVFRDEDSTGNDEDIMVDSDDDSWD
                                                                   
NP_001 PLSQGDLSHPPRKKDRKNRKLGPGAGAGFGVLRRPRPTPGDGEKRSRIKKSKKRKLKKAE
           170       180       190       200       210       220   

>>NP_077273 (OMIM: 612910) PHD finger protein 23 isoform  (403 aa)
 initn: 641 init1: 395 opt: 434  Z-score: 402.7  bits: 83.0 E(85289): 1.1e-15
Smith-Waterman score: 435; 33.7% identity (53.9% similar) in 258 aa overlap (39-286:162-393)

       10        20        30        40        50        60        
pF1KB4 AFHPEEYSPSCKRRRTVEDFNKFCTFVLAYAGYIPYPKEELPLRSSPSPANSTAGTIDSD
                                     :.  : :  .  :   :   .     . . 
NP_077 KLKDSLFDLDGPKVASPLSPTSLTHTSRPPAALTPVPLSQGDLSHPPRKKDRKNRKL-GP
             140       150       160       170       180        190

       70        80        90       100       110       120        
pF1KB4 GWDAGFSDIASSVPLPVSDRCFSHLQPTLLQRAKPSNFLLDRKKTDKLKKKKKRKRRDSD
       :  :::. .    : : . .  :... .  .. : .      .. :.:      .   ::
NP_077 GAGAGFGVLRRPRPTPGDGEKRSRIKKSKKRKLKKA------ERGDRLPPPGPPQAPPSD
              200       210       220             230       240    

      130       140          150       160       170       180     
pF1KB4 APGKEGYRGGLLKLEAADPYV---ETPTSPTLQDIPQAPSDPCSGWDSDTPSSGSCATVS
       . ..:  .    . :     :   :.:. :.:   :.::  :              ::: 
NP_077 TDSEEEEEEEEEEEEEEMATVVGGEAPV-PVLPTPPEAPRPP--------------ATVH
          250       260       270        280                       

         190       200       210              220       230        
pF1KB4 PDQVKEIKTEGKRTIVRQGKQVVFRDEDSTGN-------DEDIMVDSDDDSWDLVTCFCM
       :. :    .:.:..    :.  . .: :....       ::::::.: ::::::.::.: 
NP_077 PEGVPPADSESKEV----GSTETSQDGDASSSEGEMRVMDEDIMVESGDDSWDLITCYCR
     290       300           310       320       330       340     

      240       250       260       270       280       290        
pF1KB4 KPFAGRPMIECNECHTWIHLSCAKIRKSNVPEVFVCQKCRDSKFDIRRSNRSRTGSRKLF
       :::::::::::. : ::::::::::.:.:::. : ::::.. . . ::            
NP_077 KPFAGRPMIECSLCGTWIHLSCAKIKKTNVPDFFYCQKCKELRPEARRLGGPPKSGEP  
         350       360       370       380       390       400     

      300
pF1KB4 LD

>--
 initn: 275 init1: 185 opt: 257  Z-score: 242.8  bits: 53.4 E(85289): 8.7e-07
Smith-Waterman score: 257; 38.6% identity (56.2% similar) in 153 aa overlap (10-156:17-152)

                      10        20        30        40          50 
pF1KB4        MDSDSCAAAFHPEEYSPSCKRRRTVEDFNKFCTFVLAYAGYIPYPKEE--LPL
                       ..::   :  :::::.:::::::.::::::::::  :::   : 
NP_077 MLEAMAEPSPEDPPPTLKPETQPPE-KRRRTIEDFNKFCSFVLAYAGYIPPSKEESDWPA
               10        20         30        40        50         

              60        70        80            90       100       
pF1KB4 RSSPSPANSTAGTIDSDGWDAGFSDIASSVPL----PVSDRCFSHLQPTLLQRAKPSNFL
        .: ::  . ... ::::::.. ::. .   .      : :  ..  ::  : . : . .
NP_077 SGSSSPLRGESAA-DSDGWDSAPSDLRTIQTFVKKAKSSKRRAAQAGPT--QPGPPRSTF
      60        70         80        90       100         110      

       110       120       130       140       150       160       
pF1KB4 LDRKKTDKLKKKKKRKRRDSDAPGKEGYRGGLLKLEAADPYVETPTSPTLQDIPQAPSDP
          .  :.    .: : .::           :. :..  : : .: :::           
NP_077 SRLQAPDSATLLEKMKLKDS-----------LFDLDG--PKVASPLSPTSLTHTSRPPAA
        120       130                  140         150       160   

       170       180       190       200       210       220       
pF1KB4 CSGWDSDTPSSGSCATVSPDQVKEIKTEGKRTIVRQGKQVVFRDEDSTGNDEDIMVDSDD
                                                                   
NP_077 LTPVPLSQGDLSHPPRKKDRKNRKLGPGAGAGFGVLRRPRPTPGDGEKRSRIKKSKKRKL
           170       180       190       200       210       220   

>>XP_011527145 (OMIM: 610335) PREDICTED: PHD finger prot  (609 aa)
 initn: 193 init1: 131 opt: 205  Z-score: 193.3  bits: 44.8 E(85289): 0.0005
Smith-Waterman score: 221; 26.0% identity (52.6% similar) in 196 aa overlap (102-279:101-296)

              80        90       100       110       120       130 
pF1KB4 AGFSDIASSVPLPVSDRCFSHLQPTLLQRAKPSNFLLDRKKTDKLKKKKKRKRRDSDAPG
                                     :::.  : ::...  .   : :.....   
XP_011 KYFHGMEKSLEPEESPGKRHVQTRGPSASDKPSQETLTRKRVSASSPTTKDKEKNKEKKF
               80        90       100       110       120       130

             140         150       160       170       180         
pF1KB4 KEGYRGGLLKLEAADPYV--ETPTSPTLQDIPQAPSDPCSGWDSDTPSSGSCAT-VSPD-
       ::  :    : .     .  : : :  ..:  : :: : .   .   :: . .. .::. 
XP_011 KEFVRVKPKKKKKKKKKTKPECPCSEEISDTSQEPSPPKAFAVTRCGSSHKPGVHMSPQL
              140       150       160       170       180       190

              190       200       210       220            230     
pF1KB4 -------QVKEIKTEGKRTIVRQGKQVVFRDEDSTGNDEDIMVDSD-----DDSWDL--V
              .  ..:.  . .. .....  . ..:  :.: :. .. :     :: .:.  :
XP_011 HGPESGHHKGKVKALEEDNLSESSSESFLWSDDEYGQDVDVTTNPDEELDGDDRYDFEVV
              200       210       220       230       240       250

           240       250       260       270       280       290   
pF1KB4 TCFCMKPFAGRPMIECNECHTWIHLSCAKIRKSNVPEVFVCQKCRDSKFDIRRSNRSRTG
        :.:     .  ::.:.::. : :  :  . . :::: ..:  :.:              
XP_011 RCICEVQEENDFMIQCEECQCWQHGVCMGLLEENVPEKYTCYVCQDPPGQRPGFKYWYDK
              260       270       280       290       300       310

           300                                                     
pF1KB4 SRKLFLD                                                     
                                                                   
XP_011 EWLSRGHMHGLAFLEENYSHQNAKKIVATHQLLGDVQRVIEVLHGLQLKMSILQSREHPD
              320       330       340       350       360       370

>>XP_016883360 (OMIM: 610335) PREDICTED: PHD finger prot  (609 aa)
 initn: 193 init1: 131 opt: 205  Z-score: 193.3  bits: 44.8 E(85289): 0.0005
Smith-Waterman score: 221; 26.0% identity (52.6% similar) in 196 aa overlap (102-279:101-296)

              80        90       100       110       120       130 
pF1KB4 AGFSDIASSVPLPVSDRCFSHLQPTLLQRAKPSNFLLDRKKTDKLKKKKKRKRRDSDAPG
                                     :::.  : ::...  .   : :.....   
XP_016 KYFHGMEKSLEPEESPGKRHVQTRGPSASDKPSQETLTRKRVSASSPTTKDKEKNKEKKF
               80        90       100       110       120       130

             140         150       160       170       180         
pF1KB4 KEGYRGGLLKLEAADPYV--ETPTSPTLQDIPQAPSDPCSGWDSDTPSSGSCAT-VSPD-
       ::  :    : .     .  : : :  ..:  : :: : .   .   :: . .. .::. 
XP_016 KEFVRVKPKKKKKKKKKTKPECPCSEEISDTSQEPSPPKAFAVTRCGSSHKPGVHMSPQL
              140       150       160       170       180       190

              190       200       210       220            230     
pF1KB4 -------QVKEIKTEGKRTIVRQGKQVVFRDEDSTGNDEDIMVDSD-----DDSWDL--V
              .  ..:.  . .. .....  . ..:  :.: :. .. :     :: .:.  :
XP_016 HGPESGHHKGKVKALEEDNLSESSSESFLWSDDEYGQDVDVTTNPDEELDGDDRYDFEVV
              200       210       220       230       240       250

           240       250       260       270       280       290   
pF1KB4 TCFCMKPFAGRPMIECNECHTWIHLSCAKIRKSNVPEVFVCQKCRDSKFDIRRSNRSRTG
        :.:     .  ::.:.::. : :  :  . . :::: ..:  :.:              
XP_016 RCICEVQEENDFMIQCEECQCWQHGVCMGLLEENVPEKYTCYVCQDPPGQRPGFKYWYDK
              260       270       280       290       300       310

           300                                                     
pF1KB4 SRKLFLD                                                     
                                                                   
XP_016 EWLSRGHMHGLAFLEENYSHQNAKKIVATHQLLGDVQRVIEVLHGLQLKMSILQSREHPD
              320       330       340       350       360       370

>>XP_005260478 (OMIM: 610335) PREDICTED: PHD finger prot  (609 aa)
 initn: 193 init1: 131 opt: 205  Z-score: 193.3  bits: 44.8 E(85289): 0.0005
Smith-Waterman score: 221; 26.0% identity (52.6% similar) in 196 aa overlap (102-279:101-296)

              80        90       100       110       120       130 
pF1KB4 AGFSDIASSVPLPVSDRCFSHLQPTLLQRAKPSNFLLDRKKTDKLKKKKKRKRRDSDAPG
                                     :::.  : ::...  .   : :.....   
XP_005 KYFHGMEKSLEPEESPGKRHVQTRGPSASDKPSQETLTRKRVSASSPTTKDKEKNKEKKF
               80        90       100       110       120       130

             140         150       160       170       180         
pF1KB4 KEGYRGGLLKLEAADPYV--ETPTSPTLQDIPQAPSDPCSGWDSDTPSSGSCAT-VSPD-
       ::  :    : .     .  : : :  ..:  : :: : .   .   :: . .. .::. 
XP_005 KEFVRVKPKKKKKKKKKTKPECPCSEEISDTSQEPSPPKAFAVTRCGSSHKPGVHMSPQL
              140       150       160       170       180       190

              190       200       210       220            230     
pF1KB4 -------QVKEIKTEGKRTIVRQGKQVVFRDEDSTGNDEDIMVDSD-----DDSWDL--V
              .  ..:.  . .. .....  . ..:  :.: :. .. :     :: .:.  :
XP_005 HGPESGHHKGKVKALEEDNLSESSSESFLWSDDEYGQDVDVTTNPDEELDGDDRYDFEVV
              200       210       220       230       240       250

           240       250       260       270       280       290   
pF1KB4 TCFCMKPFAGRPMIECNECHTWIHLSCAKIRKSNVPEVFVCQKCRDSKFDIRRSNRSRTG
        :.:     .  ::.:.::. : :  :  . . :::: ..:  :.:              
XP_005 RCICEVQEENDFMIQCEECQCWQHGVCMGLLEENVPEKYTCYVCQDPPGQRPGFKYWYDK
              260       270       280       290       300       310

           300                                                     
pF1KB4 SRKLFLD                                                     
                                                                   
XP_005 EWLSRGHMHGLAFLEENYSHQNAKKIVATHQLLGDVQRVIEVLHGLQLKMSILQSREHPD
              320       330       340       350       360       370

>>XP_011527146 (OMIM: 610335) PREDICTED: PHD finger prot  (609 aa)
 initn: 193 init1: 131 opt: 205  Z-score: 193.3  bits: 44.8 E(85289): 0.0005
Smith-Waterman score: 221; 26.0% identity (52.6% similar) in 196 aa overlap (102-279:101-296)

              80        90       100       110       120       130 
pF1KB4 AGFSDIASSVPLPVSDRCFSHLQPTLLQRAKPSNFLLDRKKTDKLKKKKKRKRRDSDAPG
                                     :::.  : ::...  .   : :.....   
XP_011 KYFHGMEKSLEPEESPGKRHVQTRGPSASDKPSQETLTRKRVSASSPTTKDKEKNKEKKF
               80        90       100       110       120       130

             140         150       160       170       180         
pF1KB4 KEGYRGGLLKLEAADPYV--ETPTSPTLQDIPQAPSDPCSGWDSDTPSSGSCAT-VSPD-
       ::  :    : .     .  : : :  ..:  : :: : .   .   :: . .. .::. 
XP_011 KEFVRVKPKKKKKKKKKTKPECPCSEEISDTSQEPSPPKAFAVTRCGSSHKPGVHMSPQL
              140       150       160       170       180       190

              190       200       210       220            230     
pF1KB4 -------QVKEIKTEGKRTIVRQGKQVVFRDEDSTGNDEDIMVDSD-----DDSWDL--V
              .  ..:.  . .. .....  . ..:  :.: :. .. :     :: .:.  :
XP_011 HGPESGHHKGKVKALEEDNLSESSSESFLWSDDEYGQDVDVTTNPDEELDGDDRYDFEVV
              200       210       220       230       240       250

           240       250       260       270       280       290   
pF1KB4 TCFCMKPFAGRPMIECNECHTWIHLSCAKIRKSNVPEVFVCQKCRDSKFDIRRSNRSRTG
        :.:     .  ::.:.::. : :  :  . . :::: ..:  :.:              
XP_011 RCICEVQEENDFMIQCEECQCWQHGVCMGLLEENVPEKYTCYVCQDPPGQRPGFKYWYDK
              260       270       280       290       300       310

           300                                                     
pF1KB4 SRKLFLD                                                     
                                                                   
XP_011 EWLSRGHMHGLAFLEENYSHQNAKKIVATHQLLGDVQRVIEVLHGLQLKMSILQSREHPD
              320       330       340       350       360       370

>>XP_016883358 (OMIM: 610335) PREDICTED: PHD finger prot  (896 aa)
 initn: 170 init1: 131 opt: 205  Z-score: 190.9  bits: 44.9 E(85289): 0.00068
Smith-Waterman score: 221; 26.0% identity (52.6% similar) in 196 aa overlap (102-279:388-583)

              80        90       100       110       120       130 
pF1KB4 AGFSDIASSVPLPVSDRCFSHLQPTLLQRAKPSNFLLDRKKTDKLKKKKKRKRRDSDAPG
                                     :::.  : ::...  .   : :.....   
XP_016 KYFHGMEKSLEPEESPGKRHVQTRGPSASDKPSQETLTRKRVSASSPTTKDKEKNKEKKF
       360       370       380       390       400       410       

             140         150       160       170       180         
pF1KB4 KEGYRGGLLKLEAADPYV--ETPTSPTLQDIPQAPSDPCSGWDSDTPSSGSCAT-VSPD-
       ::  :    : .     .  : : :  ..:  : :: : .   .   :: . .. .::. 
XP_016 KEFVRVKPKKKKKKKKKTKPECPCSEEISDTSQEPSPPKAFAVTRCGSSHKPGVHMSPQL
       420       430       440       450       460       470       

              190       200       210       220            230     
pF1KB4 -------QVKEIKTEGKRTIVRQGKQVVFRDEDSTGNDEDIMVDSD-----DDSWDL--V
              .  ..:.  . .. .....  . ..:  :.: :. .. :     :: .:.  :
XP_016 HGPESGHHKGKVKALEEDNLSESSSESFLWSDDEYGQDVDVTTNPDEELDGDDRYDFEVV
       480       490       500       510       520       530       

           240       250       260       270       280       290   
pF1KB4 TCFCMKPFAGRPMIECNECHTWIHLSCAKIRKSNVPEVFVCQKCRDSKFDIRRSNRSRTG
        :.:     .  ::.:.::. : :  :  . . :::: ..:  :.:              
XP_016 RCICEVQEENDFMIQCEECQCWQHGVCMGLLEENVPEKYTCYVCQDPPGQRPGFKYWYDK
       540       550       560       570       580       590       

           300                                                     
pF1KB4 SRKLFLD                                                     
                                                                   
XP_016 EWLSRGHMHGLAFLEENYSHQNAKKIVATHQLLGDVQRVIEVLHGLQLKMSILQSREHPD
       600       610       620       630       640       650       

>>XP_016883359 (OMIM: 610335) PREDICTED: PHD finger prot  (896 aa)
 initn: 170 init1: 131 opt: 205  Z-score: 190.9  bits: 44.9 E(85289): 0.00068
Smith-Waterman score: 221; 26.0% identity (52.6% similar) in 196 aa overlap (102-279:388-583)

              80        90       100       110       120       130 
pF1KB4 AGFSDIASSVPLPVSDRCFSHLQPTLLQRAKPSNFLLDRKKTDKLKKKKKRKRRDSDAPG
                                     :::.  : ::...  .   : :.....   
XP_016 KYFHGMEKSLEPEESPGKRHVQTRGPSASDKPSQETLTRKRVSASSPTTKDKEKNKEKKF
       360       370       380       390       400       410       

             140         150       160       170       180         
pF1KB4 KEGYRGGLLKLEAADPYV--ETPTSPTLQDIPQAPSDPCSGWDSDTPSSGSCAT-VSPD-
       ::  :    : .     .  : : :  ..:  : :: : .   .   :: . .. .::. 
XP_016 KEFVRVKPKKKKKKKKKTKPECPCSEEISDTSQEPSPPKAFAVTRCGSSHKPGVHMSPQL
       420       430       440       450       460       470       

              190       200       210       220            230     
pF1KB4 -------QVKEIKTEGKRTIVRQGKQVVFRDEDSTGNDEDIMVDSD-----DDSWDL--V
              .  ..:.  . .. .....  . ..:  :.: :. .. :     :: .:.  :
XP_016 HGPESGHHKGKVKALEEDNLSESSSESFLWSDDEYGQDVDVTTNPDEELDGDDRYDFEVV
       480       490       500       510       520       530       

           240       250       260       270       280       290   
pF1KB4 TCFCMKPFAGRPMIECNECHTWIHLSCAKIRKSNVPEVFVCQKCRDSKFDIRRSNRSRTG
        :.:     .  ::.:.::. : :  :  . . :::: ..:  :.:              
XP_016 RCICEVQEENDFMIQCEECQCWQHGVCMGLLEENVPEKYTCYVCQDPPGQRPGFKYWYDK
       540       550       560       570       580       590       

           300                                                     
pF1KB4 SRKLFLD                                                     
                                                                   
XP_016 EWLSRGHMHGLAFLEENYSHQNAKKIVATHQLLGDVQRVIEVLHGLQLKMSILQSREHPD
       600       610       620       630       640       650       

>>XP_016883357 (OMIM: 610335) PREDICTED: PHD finger prot  (957 aa)
 initn: 170 init1: 131 opt: 205  Z-score: 190.4  bits: 45.0 E(85289): 0.00072
Smith-Waterman score: 221; 26.0% identity (52.6% similar) in 196 aa overlap (102-279:449-644)

              80        90       100       110       120       130 
pF1KB4 AGFSDIASSVPLPVSDRCFSHLQPTLLQRAKPSNFLLDRKKTDKLKKKKKRKRRDSDAPG
                                     :::.  : ::...  .   : :.....   
XP_016 KYFHGMEKSLEPEESPGKRHVQTRGPSASDKPSQETLTRKRVSASSPTTKDKEKNKEKKF
      420       430       440       450       460       470        

             140         150       160       170       180         
pF1KB4 KEGYRGGLLKLEAADPYV--ETPTSPTLQDIPQAPSDPCSGWDSDTPSSGSCAT-VSPD-
       ::  :    : .     .  : : :  ..:  : :: : .   .   :: . .. .::. 
XP_016 KEFVRVKPKKKKKKKKKTKPECPCSEEISDTSQEPSPPKAFAVTRCGSSHKPGVHMSPQL
      480       490       500       510       520       530        

              190       200       210       220            230     
pF1KB4 -------QVKEIKTEGKRTIVRQGKQVVFRDEDSTGNDEDIMVDSD-----DDSWDL--V
              .  ..:.  . .. .....  . ..:  :.: :. .. :     :: .:.  :
XP_016 HGPESGHHKGKVKALEEDNLSESSSESFLWSDDEYGQDVDVTTNPDEELDGDDRYDFEVV
      540       550       560       570       580       590        

           240       250       260       270       280       290   
pF1KB4 TCFCMKPFAGRPMIECNECHTWIHLSCAKIRKSNVPEVFVCQKCRDSKFDIRRSNRSRTG
        :.:     .  ::.:.::. : :  :  . . :::: ..:  :.:              
XP_016 RCICEVQEENDFMIQCEECQCWQHGVCMGLLEENVPEKYTCYVCQDPPGQRPGFKYWYDK
      600       610       620       630       640       650        

           300                                                     
pF1KB4 SRKLFLD                                                     
                                                                   
XP_016 EWLSRGHMHGLAFLEENYSHQNAKKIVATHQLLGDVQRVIEVLHGLQLKMSILQSREHPD
      660       670       680       690       700       710        




300 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 03:07:18 2016 done: Fri Nov  4 03:07:19 2016
 Total Scan time:  7.540 Total Display time:  0.010

Function used was FASTA [36.3.4 Apr, 2011]
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