GENSCAN 1.0	Date run:  4-Nov-116	Time: 02:31:14

Sequence gi568815578f:4599221_4799979 : 200759 bp : 44.21% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 PlyA -    444    439    6                               1.05
 1.03 Term -   2926   2822  105  1  0   62   43    70 0.172  -1.69
 1.02 Intr -   9453   9393   61  2  1   82  123    33 0.438   4.94
 1.01 Init -   9921   9842   80  0  2   87   44    67 0.207   0.84
 1.00 Prom -  20285  20246   40                              -3.06

 2.03 PlyA -  21033  21028    6                               1.05
 2.02 Term -  25324  24888  437  2  2    0   38   291 0.838  10.75
 2.01 Init -  26549  26498   52  2  1  106   94    88 0.997  12.53
 2.00 Prom -  28687  28648   40                              -6.36

 3.02 PlyA -  28850  28845    6                               1.05
 3.01 Sngl -  30999  30628  372  0  0  100   48   266 0.537  19.93
 3.00 Prom -  31994  31955   40                              -5.96

 4.00 Prom +  39675  39714   40                              -2.36
 4.01 Init +  40880  40944   65  1  2   69   76    45 0.609   2.02
 4.02 Intr +  79971  80024   54  0  0   80   42    78 0.002   0.49
 4.03 Intr +  93850  93963  114  1  0  106   17    80 0.230   2.26
 4.04 Term +  99991 100762  772  1  1  136   55   886 0.627  82.97
 4.05 PlyA + 104584 104589    6                               1.05

 5.04 PlyA - 108220 108215    6                               1.05
 5.03 Term - 114005 113911   95  0  2   60   47    96 0.577   0.69
 5.02 Intr - 114605 114506  100  2  1  110   89    42 0.627   6.18
 5.01 Init - 120075 119989   87  0  0   82   42    34 0.103  -1.15
 5.00 Prom - 124808 124769   40                              -3.56

 6.00 Prom + 124865 124904   40                              -4.56
 6.01 Sngl + 125332 125862  531  0  0   85   43   792 0.940  68.47
 6.02 PlyA + 126414 126419    6                               1.05

 7.14 PlyA - 128357 128352    6                               1.05
 7.13 Term - 137071 136809  263  2  2   49   48   171 0.948   4.89
 7.12 Intr - 149801 149601  201  0  0   66   60    59 0.011   0.16
 7.11 Intr - 176830 176754   77  0  2   34   75    80 0.092   0.46
 7.10 Intr - 177662 177532  131  2  2   53   63    87 0.168   2.19
 7.09 Intr - 183310 183238   73  0  1   77   78    65 0.292   3.81
 7.08 Intr - 187108 187011   98  1  2  126  108    86 0.992  13.21
 7.07 Intr - 188534 188413  122  0  2   77   86   216 0.938  20.51
 7.06 Intr - 189048 188997   52  0  1   59  103    83 0.795   5.38
 7.05 Intr - 190477 190406   72  1  0   77   34   140 0.784   7.10
 7.04 Intr - 191391 191231  161  1  2   80  116   215 0.999  23.21
 7.03 Intr - 193407 193319   89  2  2   98   88    92 0.619   9.81
 7.02 Intr - 196746 196595  152  0  2   82   84   200 0.999  17.96
 7.01 Intr - 198865 198790   76  0  1   93   94    90 0.996   9.62

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815578f:4599221_4799979|GENSCAN_predicted_peptide_1|81_aa
MAASQGLSSQGASTILVHSPRPEGAQGACNMVIGNPFLEEQTCMMSSLAVPLRISGCLRT
LNFNQSARSTGEIDCSQHTGY

>gi568815578f:4599221_4799979|GENSCAN_predicted_CDS_1|246_bp
atggctgcctcccagggcctgtcctcccaaggggccagcactatccttgtgcacagccct
cggcccgagggggcccaaggagcctgcaatatggtgatagggaatcctttcttagaagaa
caaacctgcatgatgagctcgctggcagtgcctctgcggatctcaggatgccttagaaca
ctgaacttcaaccagagtgccaggtccacaggagagattgactgctcccaacacacaggc
tactag

>gi568815578f:4599221_4799979|GENSCAN_predicted_peptide_2|162_aa
MAEKEQLQSAAPSEINAERNSININKKYVHTETPSEGHQHQRPKVDKSMKMRKIQRKKAE
NSKNQNASSPPKDHNSSPAREQNWTEKEFDELTEVGFRRWVITNSSELKEHVITQCKEAK
NLEKRLEELLTRVISLEKNTNDLMELKNIAQELLEAYTSINS

>gi568815578f:4599221_4799979|GENSCAN_predicted_CDS_2|489_bp
atggccgaaaaggaacagctccagtctgcagctcccagcgagatcaacgcagaaagaaat
agcatcaatatcaacaaaaagtatgtccacacagaaaccccatccgaaggtcaccaacat
caaagaccaaaggtagataaatccatgaagatgaggaaaatccagcgcaaaaaggctgaa
aattccaaaaaccagaatgcctcttctcctccaaaggatcacaactcctcgccagcaagg
gaacaaaactggacagagaaagagtttgacgaattgacagaagtaggcttcagaaggtgg
gtaataacaaactcctccgagttaaaggagcatgttataacccaatgcaaggaagctaag
aaccttgaaaaaaggctagaggaattgctaactagagtaatcagtttggagaagaacaca
aatgacctgatggagctgaaaaacatagcacaagaacttcttgaagcatacacaagtatc
aatagctga

>gi568815578f:4599221_4799979|GENSCAN_predicted_peptide_3|123_aa
MARGPKKHLKQVAAPKHWMLDKLTGVFAPHPSTSPHKLRECLPLIIFIRNRLKYALTGEE
VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKMGENFCLICDTKGHFAVHRITPEEAK
YKL

>gi568815578f:4599221_4799979|GENSCAN_predicted_CDS_3|372_bp
atggctcgtggtcccaagaagcatctaaagcaggtagcagctccaaagcattggatgctg
gataaattgactggtgtgtttgctcctcatccatccaccagtccccacaagttgagagag
tgtctccccctcatcattttcataaggaacagacttaagtatgccctgacaggagaggaa
gtaaagaagatttgcatgcagcggttcattaagatcgatggcaaggtccgcactgatata
acctaccctgctggattcatggatgtcatcagcattgacaagatgggagagaatttctgt
ctgatctgtgacaccaagggtcactttgctgtacatcgtattacacctgaggaggccaag
tacaagttgtga

>gi568815578f:4599221_4799979|GENSCAN_predicted_peptide_4|334_aa
MRLESGVNGSVMIRKQISSRARTFYEIEGGSTLQVIQLQEHDPPPVCPISVDGITAISLV
MEVPDPGNSHSSIHSTSRAVIMANLGCWMLVLFVATWSDLGLCKKRPKPGGWNTGGSRYP
GQGSPGGNRYPPQGGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQGGGTHSQW
NKPSKPKTNMKHMAGAAAAGAVVGGLGGYMLGSAMSRPIIHFGSDYEDRYYRENMHRYPN
QVYYRPMDEYSNQNNFVHDCVNITIKQHTVTTTTKGENFTETDVKMMERVVEQMCITQYE
RESQAYYQRGSSMVLFSSPPVILLISFLIFLIVG

>gi568815578f:4599221_4799979|GENSCAN_predicted_CDS_4|1005_bp
atgaggctagaaagtggggtaaatggaagtgtcatgatcagaaaacagatcagcagccgg
gcacgaacattctacgagatagagggtggtagcacacttcaggtcatccagctgcaagag
catgaccctccaccagtttgtcctatttcagtagatggcatcaccgccatctccctggtt
atggaagtcccagacccgggcaactctcactcctccatccactcaaccagcagagcagtc
attatggcgaaccttggctgctggatgctggttctctttgtggccacatggagtgacctg
ggcctctgcaagaagcgcccgaagcctggaggatggaacactgggggcagccgatacccg
gggcagggcagccctggaggcaaccgctacccacctcagggcggtggtggctgggggcag
cctcatggtggtggctgggggcagcctcatggtggtggctgggggcagccccatggtggt
ggctggggacagcctcatggtggtggctggggtcaaggaggtggcacccacagtcagtgg
aacaagccgagtaagccaaaaaccaacatgaagcacatggctggtgctgcagcagctggg
gcagtggtggggggccttggcggctacatgctgggaagtgccatgagcaggcccatcata
catttcggcagtgactatgaggaccgttactatcgtgaaaacatgcaccgttaccccaac
caagtgtactacaggcccatggatgagtacagcaaccagaacaactttgtgcacgactgc
gtcaatatcacaatcaagcagcacacggtcaccacaaccaccaagggggagaacttcacc
gagaccgacgttaagatgatggagcgcgtggttgagcagatgtgtatcacccagtacgag
agggaatctcaggcctattaccagagaggatcgagcatggtcctcttctcctctccacct
gtgatcctcctgatctctttcctcatcttcctgatagtgggatga

>gi568815578f:4599221_4799979|GENSCAN_predicted_peptide_5|93_aa
MAIYEPQSGFSPDTQSAGTLILDLPASRTLPHGNITDFPTGHEPMPLFHLLCSPDSNCKC
YAGTRMKLEGIILTKLTREQKTKHRMFSLTSGS

>gi568815578f:4599221_4799979|GENSCAN_predicted_CDS_5|282_bp
atggccatctatgaaccacaaagtgggttctcaccagacacccaatctgctggcaccttg
atcttggacttgccagcctccagaacactgccacatggaaacattactgattttccaact
ggacatgaaccaatgcctctcttccatcttctctgctctcccgactccaactgcaagtgc
tacgcagggacacgaatgaagctggaaggcatcatcctcaccaaactaacacgggaacag
aaaaccaaacaccgcatgttctcactcacaagtgggagttga

>gi568815578f:4599221_4799979|GENSCAN_predicted_peptide_6|176_aa
MRKHLSWWWLATVCMLLFSHLSAVQTRGIKHRIKWNRKALPSTAQITEAQVAENRPGAFI
KQGRKLDIDFGAEGNRYYEANYWQFPDGIHYNGCSEANVTKEAFVTGCINATQAANQGEF
QKPDNKLHQQVLWRLVQELCSLKHCEFWLERGAGLRVTMHQPVLLCLLALIWLTVK

>gi568815578f:4599221_4799979|GENSCAN_predicted_CDS_6|531_bp
atgaggaagcacctgagctggtggtggctggccactgtctgcatgctgctcttcagccac
ctctctgcggtccagacgaggggcatcaagcacagaatcaagtggaaccggaaggccctg
cccagcactgcccagatcactgaggcccaggtggctgagaaccgcccgggagccttcatc
aagcaaggccgcaagctcgacattgacttcggagccgagggcaacaggtactacgaggcc
aactactggcagttccccgatggcatccactacaacggctgctctgaggctaatgtgacc
aaggaggcatttgtcaccggctgcatcaatgccacccaggcggcgaaccagggggagttc
cagaagccagacaacaagctccaccagcaggtgctctggcggctggtccaggagctctgc
tccctcaagcattgcgagttttggttggagaggggcgcaggacttcgggtcaccatgcac
cagccagtgctcctctgccttctggctttgatctggctcacggtgaaataa

>gi568815578f:4599221_4799979|GENSCAN_predicted_peptide_7|522_aa
XNELLLHLKTYNLYYEGQNLQLRHREEEDEFIVEGLLNISWGLRRPIRLQMQDDNERIRP
PPSSSSWHSGCNLGAQGTTLKPLTVPKVQISEVDAPPEGDQMPSSTDSRGLKPLQEDTPQ
LMRTRSDVGVRRRGNVRTPSDQRRIRRHRFSINGHFYNHKTSVFTPAYGSVTNVRINSTM
TTPQIENSAEEFALYVVHTSGEKQKLKATDYPLIARILQGPCEQISKVFLMEKDQVEEVT
YDVAQYIKFEMPVLKSFIQKLQEEEDREVKKLMRKDSSTSPVGHGVEAQKGFCKLHRTGS
LSPSKLPLMPPTLTCRAIYGVNSTESGVSYNILPWDNPGVLRSSPVMRFFRYTRQEHRDT
ESPLSLRQGREDKTRSQSFLQLARTMPWTALRHAENNGALESLGPASSGQSSSSPDVFAE
VTLLSWKGVGSCALGEKCILIDENDSNIGTETKKNCHENENIGNGLLHQALSVFLLNTKM
SYSDSRDQMLKLPFEPVSPILGCSHPLSNPDKLERNDVIDIS

>gi568815578f:4599221_4799979|GENSCAN_predicted_CDS_7|1569_bp
nnaaatgaacttctcttgcatctgaagacctacaacttgtactatgaaggccagaattta
cagctccggcaccgggaggaagaagacgagttcattgtggaggggctcctgaacatctcc
tggggcctgcgccggcccattcgcctgcagatgcaggatgacaacgaacgcattcgaccc
cctccatcctcctcctcctggcactctggctgtaacctgggggctcagggaaccactctg
aagcccctgactgtgcccaaagttcagatctcagaggtggatgccccgccggagggtgac
cagatgccaagctccacagactccaggggcctgaagcccctgcaggaggacaccccacag
ctgatgcgcacacgcagtgatgttggggtgcgtcgccgtggcaatgtgaggacgcctagt
gaccagcggcgaatcagacgccaccgcttctccatcaacggccatttctacaaccataag
acatccgtgttcacaccagcctatggctctgtcaccaacgtccgcatcaacagcaccatg
accaccccacagattgagaattcagcagaggagtttgccttgtacgtggtccatacgagt
ggtgagaaacagaagctgaaggccaccgattacccgctgattgcccgaatcctccagggc
ccatgtgagcagatctccaaagtgttcctaatggagaaggaccaggtggaggaagtcacc
tacgacgtggcccagtatataaagttcgagatgccggtacttaaaagcttcattcagaag
ctccaggaggaagaagatcgggaagtaaagaagctgatgcgcaaggacagcagcaccagc
cctgtggggcatggagtggaagcccagaagggcttctgcaagctgcacagaactgggtca
ctaagcccctctaagctgcccttgatgccacctaccctcacctgcagagccatctatggg
gtcaacagcaccgagagtggggtatcttacaacatccttccctgggacaacccaggggtt
ctgagaagctcacccgtgatgcgatttttccggtacacaaggcaagaacaccgggataca
gaaagccctctgtccttgcgacaaggaagagaggacaaaacccggagccaaagcttcctt
cagctggcccgcaccatgccctggacagctctgagacatgcagagaacaatggagccctg
gagagcctggggccggcttcctctggacaatcttcatcctcacctgatgtttttgctgaa
gtcactttgctctcatggaaaggtgttggcagttgtgccttgggggagaagtgtattctt
attgatgaaaatgacagtaatattggaactgagaccaagaagaattgtcacgagaatgaa
aacattgggaatggattattgcatcaagctcttagtgtcttcttactcaacaccaaaatg
agctacagtgacagcagagatcagatgctgaaattacctttcgagccagtttcaccaata
cttggttgtagtcatccattaagtaatccagacaagcttgagagaaatgatgtcattgac
ataagttga