GENSCAN 1.0	Date run:  4-Nov-116	Time: 02:28:08

Sequence gi568815597r:45411332_45619043 : 207712 bp : 44.46% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   3725   3839  115  1  1   52  -17   143 0.476   0.22
 1.02 Term +   3856   4013  158  2  2   48   38   175 0.980   6.60
 1.03 PlyA +   4204   4209    6                               1.05

 2.10 PlyA -   6612   6607    6                               1.05
 2.09 Term -  10515  10390  126  0  0  105   39    58 0.399   0.88
 2.08 Intr -  77273  77243   31  1  1   89   91    40 0.086   2.53
 2.07 Intr -  79633  79521  113  1  2   68   97    36 0.058   1.68
 2.06 Intr -  85292  85225   68  0  2  113   97    65 0.794   8.52
 2.05 Intr -  86052  85968   85  0  1   36   80    60 0.620  -0.61
 2.04 Intr -  88112  88014   99  2  0   76  111    35 0.528   4.91
 2.03 Intr -  88335  88201  135  0  0   62  100   133 0.567  12.66
 2.02 Intr -  88750  88551  200  2  2   70   23   146 0.804   5.37
 2.01 Init -  89364  89316   49  0  1   86   58    27 0.380  -1.39
 2.00 Prom -  90170  90131   40                              -7.06

 3.00 Prom +  91269  91308   40                              -7.56
 3.01 Init +  94765  94879  115  0  1   44   39   126 0.644   3.67
 3.02 Intr +  96077  96219  143  0  2   61   78   146 0.612  10.97
 3.03 Intr +  96881  97033  153  1  0   88   94   209 0.988  21.77
 3.04 Term +  97465  97884  420  0  0  119   34   201 0.804  13.09
 3.05 PlyA +  98785  98790    6                               1.05

 4.07 PlyA -  99737  99732    6                              -1.95
 4.06 Term - 100083  99998   86  1  2   93   53    89 0.717   3.72
 4.05 Intr - 103306 103176  131  0  2   95  121    97 0.999  14.04
 4.04 Intr - 103664 103542  123  1  0   79   91    96 0.997   8.70
 4.03 Intr - 104476 104323  154  2  1  122   54    99 0.999   9.03
 4.02 Intr - 107723 107607  117  0  0   90  100    99 0.967  11.74
 4.01 Init - 116522 116420  103  2  1   49   93    74 0.475   4.41
 4.00 Prom - 121246 121207   40                              -4.86

 5.00 Prom + 132950 132989   40                              -7.06
 5.01 Init + 133235 133287   53  1  2   93   81   -27 0.225  -1.99
 5.02 Intr + 136097 136223  127  2  1   69  115    74 0.401   8.88
 5.03 Intr + 139312 139545  234  0  0   -9   64   154 0.251   1.19
 5.04 Intr + 150458 150547   90  1  0   95   94    20 0.319   3.49
 5.05 Intr + 155238 155357  120  2  0   83  116   214 0.999  24.39
 5.06 Intr + 155538 155689  152  2  2   59   35   207 0.993  11.46
 5.07 Intr + 156651 156846  196  0  1   50  110   248 0.969  22.62
 5.08 Intr + 157154 157353  200  1  2   50   80    84 0.978   1.95
 5.09 Intr + 157596 157668   73  0  1   86   75    78 0.993   5.71
 5.10 Intr + 157812 157898   87  2  0  102   89    55 0.971   7.17
 5.11 Intr + 172777 172874   98  0  2  101   82    93 0.001   8.81
 5.12 Intr + 179892 179939   48  0  0   84   94    72 0.326   5.20
 5.13 Intr + 190924 191034  111  1  0   64   78    79 0.445   3.99
 5.14 Intr + 193605 193685   81  0  0   62   86    57 0.721   1.65
 5.15 Intr + 195151 195260  110  1  2   82   80    86 0.953   7.13
 5.16 Intr + 195990 197006 1017  1  0   45   86   746 0.162  60.73
 5.17 Intr + 201838 201917   80  2  2   35   95    99 0.238   4.57
 5.18 Intr + 202765 202850   86  0  2   30   93    87 0.986   2.02
 5.19 Intr + 202962 203035   74  0  2   89   55    21 0.521  -2.05
 5.20 Intr + 203682 203870  189  1  0   80   92   283 0.999  27.46
 5.21 Intr + 203974 204140  167  2  2   76   16   161 0.900   7.38
 5.22 Term + 206132 206272  141  1  0   26   47   186 0.489   6.23
 5.23 PlyA + 206898 206903    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  79593  79521   73  0  1   44   97   113 0.815   7.03
S.002 Term + 158560 158625   66  0  0  123   53    26 0.939   0.54
S.003 Sngl - 173109 172780  330  0  0  110   43   236 0.943  16.05


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:45411332_45619043|GENSCAN_predicted_peptide_1|90_aa
SNSEPLGHVSFELFADKFPKTTENFCALTTGEKGFGYKELFQGLCVRLDGKHVVFGKVKE
GMNIVEAMGHFGSGNGKTSKEITIADCGQL

>gi568815597r:45411332_45619043|GENSCAN_predicted_CDS_1|273_bp
tcaaacagcgagcccttgggccacgtctccttcgagctgtttgcagacaagtttccaaag
acaacagaaaacttttgtgctctgaccactggagagaaaggatttggttataaggaatta
ttccagggtttatgtgtccggttggatggcaagcatgtggtctttggcaaggtgaaagaa
ggcatgaatattgtggaggccatggggcactttgggtctgggaatggcaagaccagcaag
gagatcaccattgctgactgtggacaactctaa

>gi568815597r:45411332_45619043|GENSCAN_predicted_peptide_2|301_aa
MGFHHVGQAGLELLTSEKGSSTASIAGCVRKRRPQFPRWRCGSQSKVGLSKPTRSFEPGG
GSCHWHRFGVVAPVYYFWGGLNQESKHKTPGSQTPAAPLPQDMNTSLSWFEQLDVLLNAT
DGNVVRNKQWLYPLGVSTELIGLCICFFCSSGCIFLGSPPQNSTAVTPAVLWEESEIMQK
ELKLLQYQLSQHQELLLKQLAEGRQAQVGSWKAKEPLPPTSCEGYYAPSLPPSPPLARAG
TPLAAQSCLSGEYCGQGFEQVRHRASGQVMALKMNTLSSNRANMLKEVQLMNRLSHPNIL
R

>gi568815597r:45411332_45619043|GENSCAN_predicted_CDS_2|906_bp
atggggtttcaccatgttggccaggctggtctcgaactcctcacctcagagaaaggtagt
tccaccgcctccatcgccggttgtgttcgcaagaggcgacctcagtttcccaggtggcgc
tgcggcagccagtccaaagtcggactttcaaaaccaacccgaagttttgaacccggcggc
ggcagttgtcactggcacaggtttggcgtggtggcgccagtgtactacttctggggaggt
ctcaaccaggagagcaagcacaagacaccagggagccagacccctgccgctcccctgcca
caggatatgaatacgagcctcagctggtttgagcagctggatgtgcttctcaacgctact
gatggaaatgtggtccggaataagcagtggctgtatcctcttggggtctccacagagctc
attggcctgtgcatctgtttcttctgtagcagtggctgtatcttcttggggtctccaccg
cagaatagcactgctgtcactcctgcagtgctgtgggaggagtcagagattatgcagaag
gaattgaagttgctgcagtaccagttgagccagcaccaggagctgctgctgaaacagctg
gctgagggacgacaggctcaggttggcagttggaaggctaaggagccgctgccaccaacg
agctgtgagggttactatgctccctctttgccgccgtctcctcctcttgcccgcgcaggc
acccctctggctgctcagtcctgcctcagtggagagtactgtggacaaggatttgagcag
gtacgacaccgagcttctggtcaggtgatggctcttaagatgaacacattgagcagtaac
cgggcaaacatgctgaaagaagtacagctcatgaatagactctcccatcccaacatcctt
aggtaa

>gi568815597r:45411332_45619043|GENSCAN_predicted_peptide_3|276_aa
MTYQKDKEVLVGKRLVEPHRFVSFEDELDCGMNGIEGSGPTLAFLVLSTPAMFDRALKPF
LQSCHLRMLTDPVDQCVAYHLGRVRESLPELQIEIIADYEVHPNRRPKILAQTAAHVAGA
AYYYQRQDVEADPWGNQRISGVCIHPRFGGWFAIRGVVLLPGIEVPDLPPRKPHDCVPTR
ADRIALLEGFNFHWRDWTYRDAVTPQERYSEEQKAYFSTPPAQRLALLGLAQPSEKPSSP
SPDLPFTTPAPKKPGNPSRARSWLSPRVSPPASPGP

>gi568815597r:45411332_45619043|GENSCAN_predicted_CDS_3|831_bp
atgacatatcaaaaggataaagaagtgctggttgggaagagactggtggaaccacatcgt
tttgtgtcatttgaggatgagttggactgtggcatgaacggcattgagggttcaggacct
accctggccttcctggtactcagcacgcctgccatgtttgaccgggccctcaagcccttc
ttgcagagctgccacctccgaatgctgactgacccagtggaccagtgtgtggcctaccat
ctgggccgtgttagagagagcctcccagagctgcagatagaaatcattgctgactacgag
gtgcaccccaaccgacgccccaagatcctggcccagacagcagcccatgtagctggggct
gcttactactaccaacgacaagatgtggaggctgacccatgggggaaccagcgcatatca
ggtgtgtgcatacacccccgatttgggggctggtttgccatccgaggggtagtgctgctg
ccagggatagaggtgccagatctgccacccagaaaacctcatgactgtgtacctacaaga
gctgaccgtatcgccctactcgaaggcttcaatttccactggcgtgattggacttaccgg
gatgctgtgacaccccaggagcgctactcagaagagcagaaggcctacttctccactcca
cctgcccaacgattggccctattgggcttggctcagccctcagagaagcctagttctccc
tccccggaccttccctttaccacacccgcccccaagaagcctgggaatcccagcagagcc
cggagctggctcagccccagggtctcaccacctgcatcccctggcccttga

>gi568815597r:45411332_45619043|GENSCAN_predicted_peptide_4|237_aa
MIAVLGHGLYTYIELPYLLHLVGCEEETMAVDESADRKMSSGNAKIGHPAPNFKATAVMP
DGQFKDISLSDYKGKYVVFFFYPLDFTFVCPTEIIAFSDRAEEFKKLNCQVIGASVDSHF
CHLAWVNTPKKQGGLGPMNIPLVSDPKRTIAQDYGVLKADEGISFRGLFIIDDKGILRQI
TVNDLPVGRSVDETLRLVQAFQFTDKHGEVCPAGWKPGSDTIKPDVQKSKEYFSKQK

>gi568815597r:45411332_45619043|GENSCAN_predicted_CDS_4|714_bp
atgattgctgtcctgggacatgggctttatacttacattgaattgccttaccttttacat
ttagttggctgtgaagaagagacaatggctgttgatgagtcagctgataggaagatgtct
tcaggaaatgctaaaattgggcaccctgcccccaacttcaaagccacagctgttatgcca
gatggtcagtttaaagatatcagcctgtctgactacaaaggaaaatatgttgtgttcttc
ttttaccctcttgacttcacctttgtgtgccccacggagatcattgctttcagtgatagg
gcagaagaatttaagaaactcaactgccaagtgattggtgcttctgtggattctcacttc
tgtcatctagcatgggtcaatacacctaagaaacaaggaggactgggacccatgaacatt
cctttggtatcagacccgaagcgcaccattgctcaggattatggggtcttaaaggctgat
gaaggcatctcgttcaggggcctttttatcattgatgataagggtattcttcggcagatc
actgtaaatgacctccctgttggccgctctgtggatgagactttgagactagttcaggcc
ttccagttcactgacaaacatggggaagtgtgcccagctggctggaaacctggcagtgat
accatcaagcctgatgtccaaaagagcaaagaatatttctccaagcagaagtga

>gi568815597r:45411332_45619043|GENSCAN_predicted_peptide_5|1177_aa
MASLVAHAYNCSTFGRPRSSGSGLTIPLKELSTLVTNDLHVHQIQKFLLWISDNMNIKTM
GEYGATDGIVNPEGRHQKNLQRGICYLTSPGKAPAAAPRRAVQCGPAKGEAGPAPCTAHV
ASATCLIVPRSSPNPRCGGAMAASCVLLHTGQKMPLIGLGTWKSEPGQVKAAVKYALSVG
YRHIDCAAIYGNEPEIGEALKEDVGPGKAVPREELFVTSKLWNTKHHPEDVEPALRKTLA
DLQLEYLDLYLMHWPYAFERGDNPFPKNADGTICYDSTHYKETWKALEALVAKGLVQALG
LSNFNSRQIDDILSVASVRPAVLQVECHPYLAQNELIAHCQARGLEVTAYSPLGSSDRAW
RDPDEPVLLEEPVVLALAEKYGRSPAQILLRWQVQRKVICIPKSITPSRILQNIKVFDFT
FSPEEMKQLNALNKNWRYIVPMLTALFRSLVRHLRGTMAMESTATAAVAAELVSADKIED
VPAPSTSADKVESLDVDSEAKKLLGLGQKHLVMGDIPAAVNAFQEAASLLGKKYGETANE
CGEAFFFYGKSLLELARMENGVLGNALEGVHVEEEEGEKTEDESLVENNDNIDEEAREEL
REQVYDAMGEKEEAKKTEDKSLAKPETDKEQDSEMEKGGREDMDISKSAEEPQEKVDLTL
DWLTETSEEAKGGAAPEGPNEAEVTSGKPEQEVPDAEEEKSVSGTDVQEECREKGGQEKQ
GEVIVSIEEKPKEVSEEQPVVTLEKQGTAVEVEAESLDPTVKPVDVGGDEPEEKVVTSEN
EAGKAVLEQLVGQEVPPAEESPEVTTEAAEASAVEAGSEVSEKPGQEAPVLPKDGAVNGP
SVVGDQTPIEPQTSIERLTETKDGSGLEEKVRAKLVPSQEETKLSVEESEAAGDGVDTKV
AQGATEKSPEDKVQIAANEETQEREEQMKEGEETEGSEEDDKENDKTEEMPNDSVLENKS
LQENEEEEIGNLELAWDMLDLAKIIFKRQETKEAQLYAAQAHLKLGEVSVESENYVQAVE
EFQSCLNLQEQYLEAHDRLLAETHYQLGLAYGYNSQYDEAVAQFSKSIEVIENRMAVLNE
QVKEAEGSSAEYKKEIEELKELLPEIREKIEDAKESQRSGNVAELALKATLRKPEEESPR
KDDAKKAKQEPEVNGGSGDAVPSGNEVSENMEEEVGS

>gi568815597r:45411332_45619043|GENSCAN_predicted_CDS_5|3534_bp
atggccagcttggtggctcatgcctataactgcagcacttttgggaggccaaggtcatct
ggctcaggattaaccattccactgaaggagctctccacattggtcaccaatgatcttcat
gtccaccaaatccaaaagtttctgctgtggatatcagacaacatgaatataaagactatg
ggagagtatggagccacggatggcattgtgaatccggagggccgacaccagaagaacctg
caacgtggcatctgctaccttacttcccccggaaaagcgcctgcggcggcgcctaggcgc
gcggtgcaatgtgggccagcaaaaggcgaggctggccccgccccttgcaccgcccacgtg
gccagcgccacctgcctcattgtgcccaggagttctccaaacccgcgctgcggaggggca
atggcggcttcctgtgttctactgcacactgggcagaagatgcctctgattggtctgggt
acctggaagagtgagcctggtcaggtaaaagcagctgttaagtatgcccttagcgtaggc
taccgccacattgattgtgctgctatctacggcaatgagcctgagattggggaggccctg
aaggaggacgtgggaccaggcaaggcggtgcctcgggaggagctgtttgtgacatccaag
ctgtggaacaccaagcaccaccccgaggatgtggagcctgccctccggaagactctggct
gacctccagctggagtatctggacctgtacctgatgcactggccttatgcctttgagcgg
ggagacaaccccttccccaagaatgctgatgggactatatgctacgactccacccactac
aaggagacttggaaggctctggaggcactggtggctaaggggctggtgcaggcgctgggc
ctgtccaacttcaacagtcggcagattgatgacatactcagtgtggcctccgtgcgtcca
gctgtcttgcaggtggaatgccacccatacttggctcaaaatgagctaattgcccactgc
caagcacgtggcctggaggtaactgcttatagccctttgggctcctctgatcgtgcatgg
cgtgatcctgatgagcctgtcctgctggaggaaccagtagtcctggcattggctgaaaag
tatggccgatctccagctcagatcttgctcaggtggcaggtccagcggaaagtgatctgc
atccccaaaagtatcactccttctcgaatccttcagaacatcaaggtgtttgacttcacc
tttagcccagaagagatgaagcagctaaatgccctgaacaaaaattggagatatattgtg
cctatgcttacggctctattccgttcgctggttcgccacctcaggggaacgatggccatg
gagtccacagccactgccgccgtcgccgcggagctggtttctgccgacaaaattgaagat
gttcctgctccttctacatctgcagataaagtggagagtctggatgtggatagtgaagct
aagaaactattgggtttaggacagaaacatctggtgatgggggatattccagcagctgtc
aatgcattccaggaagcagctagtcttttaggtaagaagtatggagagacagctaatgag
tgtggagaagccttctttttctatgggaaatcacttctggagttggcaagaatggagaat
ggtgtgttgggaaacgccttggaaggtgtgcatgtggaagaggaagaaggagaaaaaaca
gaagatgaatctctggtagaaaataatgataacatagatgaggaagcaagggaagagttg
agagaacaggtttatgacgccatgggagaaaaagaagaagccaaaaaaacagaagacaag
tctttggcaaagcctgaaactgataaagaacaggacagtgaaatggagaagggtggaaga
gaagatatggatataagtaaatctgcagaggagccacaggaaaaagttgacttgactcta
gattggttaactgaaacctctgaagaggcaaaaggaggagcagcaccagaaggaccgaat
gaagctgaggtcacttctgggaagccagaacaggaagtaccagatgctgaggaagaaaaa
tcagtttctggaactgatgtccaagaagagtgcagagaaaaaggaggtcaggagaagcag
ggagaggtaattgtgagcatagaggagaagccaaaagaagtttcagaagagcagcctgtg
gtgactctagaaaagcagggcactgcagtggaggtagaagcagagtctttagacccgaca
gtcaagccagtggatgtgggtggggacgagccagaggagaaggtagttacctctgaaaac
gaggcaggaaaggcggttcttgaacaactggtaggtcaagaagtaccacctgctgaagag
tcaccagaggtgacaacagaggctgcagaggcctcagctgtagaggctggatcagaagtc
tctgaaaagcctgggcaggaggctccagttctccctaaggatggtgcagtcaatggaccg
tcagttgtaggagatcagactcctattgaaccacagacttctatagaaagactgacagaa
acaaaagatggctcaggactagaggagaaggtcagggcaaagctggttcctagtcaggag
gagactaagctgtctgtagaagagtctgaggcagctggagatggggttgataccaaggta
gcccagggagctactgagaaatcacctgaagacaaagttcagatagctgctaatgaagag
acacaagagagagaagaacagatgaaagagggtgaagaaactgaaggctcagaagaggat
gataaagaaaatgataagaccgaagaaatgccaaatgattcagtccttgaaaacaagtct
cttcaagaaaatgaggaggaggagattgggaacctagagcttgcctgggatatgctggat
ttagcaaagatcatttttaaaaggcaagaaacaaaagaagcacagctttatgctgcccag
gcacatcttaaactcggagaagttagtgttgaatctgaaaactatgtgcaagctgtggag
gagttccagtcctgccttaacctgcaggaacagtacctggaagcccacgaccgtctcctt
gcagagacccactaccagctgggcttggcttatgggtacaactctcagtatgatgaggca
gtggcacagttcagcaaatctattgaagtcattgagaacagaatggctgtactaaacgag
caggtgaaggaggctgaaggatcgtctgctgaatacaagaaagaaattgaggaactaaag
gaactgctacccgaaattagagagaagatagaagatgcaaaggagtctcagcgtagtggg
aatgtagctgaactggctctgaaagctactctgaggaaaccagaggaagagagtccccgg
aaagatgatgcaaagaaagccaaacaagagccggaggtgaacggaggcagtggggatgct
gtccccagtggaaatgaagtttcggaaaacatggaggaggaggtgggcagttaa